F406238

General Info

Members Datasets Scaffolds Average Seq Length
321 233 642 632

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|3006425503|3006429508
Length 717
Sequence PERQAWDVVVVGAGGAGLRAAIEARERGARTAVVCKSLFGKAHTVMAEGGIAASMGNVNQGDNWQVHFRDTMRGGKFLNDWRMAELHAQEAPDRVWELETWGALFDRTADGRISQRNFGGHEYPRLAHVGDRTGLELIRTLQQKIVALQQEDFREFGDHEARLKIFQECTVTRVLTEPGPPGTAGPSGPPPADGRGKVDETDETDGTDETGGVEEPSGGRVSGVFGYERESGRFFVLQAPSVVLATGGIGKSFKVTSNSWEYTGDGHALALLAGARLTNMEFVQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSDGKRFMFDYVPDVFKEKYAQTEEEGDRWYEDPDHNRRPPELLPRDEVARAINAEVKAGRGSPHGGVFLDVSTRVPAETIRRRLPSMYHQFKELADVDITAEPMEVGPTCHYVMGGVWVDPDTARARGVGGLYAAGEVAGGMHGSNRLGGNSLSDLLVFGRRAGLHAARHALAVPDGERPEVAGADVEAAVAEALRPFGTATPATAADTASATASAAAAGGGVTGPAAPENPYALHQELQQTMNDLVGIIRRGPEMTDALGRLAGLRERARRALVEGHRQFNPGWHLALDLRNMLLVSECVARAALEREESRGGHTREDRPRMERDWRRVNLLCRLATPAAAGSAPGTSGATPGAGAGAGAGAGAGAAIELVRHTPPPIRSDLLALFEKDELGKYLSEEEIFQ

Samples

Sample ID Description Type Environment
1 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
8 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
9 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
10 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
11 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
12 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
13 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
14 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
15 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
16 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
17 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
18 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
19 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
20 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
21 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
22 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
23 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
26 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
27 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
28 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
29 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
30 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
31 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
32 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
33 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
34 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
35 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
36 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
37 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
38 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
39 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
40 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
41 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
42 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
43 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
44 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
45 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
46 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
47 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
48 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
49 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
50 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
51 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
52 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
53 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
54 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
55 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
56 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
57 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
58 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
59 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
60 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
61 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
62 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
63 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
64 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
65 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
66 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
67 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
68 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
69 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
70 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
71 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
72 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
73 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
74 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
75 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
76 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
77 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
78 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
79 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
80 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
81 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
82 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
83 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
84 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
85 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
86 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
87 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
88 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
89 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
90 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
91 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
92 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
93 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
94 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
95 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
96 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
97 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
98 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
99 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
100 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
101 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
102 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
103 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
104 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
105 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
109 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
124 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
125 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
131 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
132 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
133 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
134 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
135 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
136 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
139 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
142 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
143 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
144 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
145 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
146 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
147 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
148 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
149 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
150 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
151 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
152 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
153 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
155 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
156 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
157 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
158 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
159 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
160 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
161 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
162 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
163 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
164 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
165 2643221647 Streptomyces sp. Root369 Isolate Unclassified
166 2643221670 Streptomyces sp. Root431 Isolate Unclassified
167 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
168 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
169 2643221714 Streptomyces sp. Root264 Isolate Unclassified
170 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
171 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
172 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
173 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
174 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
175 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
176 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
177 2808606448 Streptomyces sp. 193411 Isolate Unclassified
178 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
179 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
180 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
181 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
182 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
183 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
184 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
185 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
186 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
187 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
188 2862574272 Streptomyces sp. AcE210 Isolate Nodule
189 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
190 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
191 2867369537 Streptomyces sp. Z26 Isolate Unclassified
192 2867428634 Streptomyces sp. RP5T Isolate Unclassified
193 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
194 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
195 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
196 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
197 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
198 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
199 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
200 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
201 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
202 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
203 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
204 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
205 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
206 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
207 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
208 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
209 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
210 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
211 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
212 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
213 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
214 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
215 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
216 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
217 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
218 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
219 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
220 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
221 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
222 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
223 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
224 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
225 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
226 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
227 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
228 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
229 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
230 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
231 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
232 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule
233 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75.39
Metatranscriptomes 0.62
Isolates 23.99

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.05
Nodule 1.25
Rhizoplane 1.87
Rhizosphere 76.95
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1129345 3300003578 Bacteria 2050
2 Ga0006562J51391_1129346 3300003578 Bacteria 2080
3 Ga0070658_10003610 3300005327 Bacteria 12676
4 Ga0070689_100040336 3300005340 Bacteria 3579
5 Ga0070714_100002831 3300005435 Bacteria 12799
6 Ga0070705_100039236 3300005440 Bacteria 2686
7 Ga0070708_100002538 3300005445 Bacteria 14094
8 Ga0070708_100093604 3300005445 Bacteria 2740
9 Ga0070699_100003942 3300005518 Bacteria 13111
10 Ga0075367_10008157 3300006178 Bacteria 5410
11 Ga0075428_100061046 3300006844 Bacteria 4127
12 Ga0075430_100005643 3300006846 Bacteria 10569
13 Ga0075431_100014434 3300006847 Bacteria 7991
14 Ga0105240_10090518 3300009093 Bacteria 3739
15 Ga0114129_10007247 3300009147 Bacteria 15788
16 Ga0114129_10008005 3300009147 Bacteria 15052
17 Ga0105242_10035084 3300009176 Bacteria 4022
18 Ga0157378_10121414 3300013297 Bacteria 2409
19 Ga0157375_10128307 3300013308 Bacteria 2654
20 Ga0182008_10005286 3300014497 Bacteria 7379
21 Ga0182007_10000370 3300015262 Bacteria 28383
22 Ga0183367_1002 3300015688 Bacteria 1101531
23 Ga0213875_10013363 3300021388 Bacteria 4035
24 Ga0209758_1011481 3300025297 Bacteria 5121
25 Ga0207426_1003294 3300025302 Bacteria 8990
26 Ga0207705_10007708 3300025909 Bacteria 7916
27 Ga0207708_10097502 3300026075 Bacteria 2272
28 Ga0265334_10008757 3300028573 Bacteria 4297
29 Ga0307517_10004859 3300028786 Bacteria 20484
30 Ga0307517_10020507 3300028786 Bacteria 8414
31 Ga0307515_10019680 3300028794 Bacteria 12120
32 Ga0307511_10000701 3300030521 Bacteria 35773
33 Ga0307512_10000716 3300030522 Bacteria 49274
34 Ga0307508_10004014 3300031616 Bacteria 14587
35 Ga0307508_10005903 3300031616 Bacteria 11556
36 Ga0307508_10010497 3300031616 Bacteria 8477
37 Ga0307514_10005164 3300031649 Bacteria 11776
38 Ga0265314_10045777 3300031711 Bacteria 3091
39 Ga0307516_10001020 3300031730 Bacteria 38830
40 Ga0307516_10011608 3300031730 Bacteria 9559
41 Ga0307516_10070884 3300031730 Bacteria 3347
42 Ga0307409_100013872 3300031995 Bacteria 5211
43 Ga0307507_10086071 3300033179 Bacteria 2729
44 Ga0307510_10045222 3300033180 Bacteria 4756
45 Ga0373927_0018847 3300035695 Bacteria 4528
46 Ga0373925_0002530 3300037068 Bacteria 14558
47 Ga0395898_0006049 3300037466 Bacteria 12988
48 Ga0395898_0116350 3300037466 Bacteria 2562
49 Ga0395905_0046857 3300037471 Bacteria 4053
50 Ga0436364_1348411 3300037853 Bacteria 20101
51 Ga0395901_0014055 3300038443 Bacteria 8149
52 Ga0395901_0181714 3300038443 Bacteria 2206
53 Ga0439436_0000266 3300041404 Bacteria 12591
54 Ga0451837_1384592 3300041494 Bacteria 3770
55 Ga0439449_0000647 3300042007 Bacteria 13093
56 Ga0439449_0010231 3300042007 Bacteria 3543
57 Ga0439457_000058 3300042014 Bacteria 23477
58 Ga0450894_000145 3300042131 Bacteria 12470
59 Ga0439458_0004221 3300042157 Bacteria 3319
60 Ga0466972_0004763 3300044658 Bacteria 6796
61 Ga0466972_0041973 3300044658 Bacteria 2225
62 Ga0466966_0035439 3300044684 Bacteria 3222
63 Ga0466963_0000478 3300044694 Bacteria 18660
64 Ga0466971_0000952 3300044719 Bacteria 11885
65 Ga0466971_0008506 3300044719 Bacteria 4475
66 Ga0466970_0000504 3300044765 Bacteria 19228
67 Ga0466970_0008265 3300044765 Bacteria 5231
68 Ga0466970_0016063 3300044765 Bacteria 3855
69 Ga0466959_0049033 3300045049 Bacteria 3102
70 Ga0466967_0002866 3300045976 Bacteria 10961
71 Ga0495592_0046351 3300046454 Bacteria 3240
72 Ga0495592_0053406 3300046454 Bacteria 2997
73 Ga0495603_0001181 3300046455 Bacteria 15218
74 Ga0495603_0001438 3300046455 Bacteria 13837
75 Ga0495603_0001724 3300046455 Bacteria 12884
76 Ga0495603_0035011 3300046455 Bacteria 3017
77 Ga0495629_0002037 3300046459 Bacteria 15715
78 Ga0495629_0003002 3300046459 Bacteria 12836
79 Ga0495629_0005707 3300046459 Bacteria 9295
80 Ga0495629_0009492 3300046459 Bacteria 7113
81 Ga0495629_0017978 3300046459 Bacteria 5068
82 Ga0495638_0010288 3300046460 Bacteria 6506
83 Ga0495638_0033752 3300046460 Bacteria 3271
84 Ga0495651_0006819 3300046462 Bacteria 8723
85 Ga0495651_0024538 3300046462 Bacteria 4690
86 Ga0495582_0000326 3300046473 Bacteria 26091
87 Ga0495662_0000955 3300046476 Bacteria 14151
88 Ga0495662_0005268 3300046476 Bacteria 6480
89 Ga0495585_0010912 3300046492 Bacteria 5398
90 Ga0495594_0000221 3300046499 Bacteria 27806
91 Ga0495594_0017718 3300046499 Bacteria 3766
92 Ga0495607_0011472 3300046501 Bacteria 5895
93 Ga0495608_0074377 3300046511 Bacteria 2214
94 Ga0495616_0007322 3300046513 Bacteria 6604
95 Ga0495628_0061887 3300046516 Bacteria 2935
96 Ga0495628_0078729 3300046516 Bacteria 2563
97 Ga0495630_0052206 3300046517 Bacteria 3061
98 Ga0495631_0008193 3300046518 Bacteria 5273
99 Ga0495632_0016866 3300046519 Bacteria 4049
100 Ga0495643_0000832 3300046522 Bacteria 33597
101 Ga0495643_0001743 3300046522 Bacteria 18764
102 Ga0495642_0017666 3300046528 Bacteria 2787
103 Ga0495652_0030265 3300046529 Bacteria 4749
104 Ga0495640_0005244 3300046533 Bacteria 10303
105 Ga0495640_0074561 3300046533 Bacteria 2268
106 Ga0495587_0008029 3300046536 Bacteria 6813
107 Ga0495609_0009483 3300046538 Bacteria 4708
108 Ga0495667_0069462 3300046559 Bacteria 2299
109 Ga0495668_0010598 3300046616 Bacteria 5569
110 Ga0495634_0003504 3300046642 Bacteria 12571
111 Ga0495634_0007769 3300046642 Bacteria 8024
112 Ga0495625_0007698 3300046660 Bacteria 9324
113 Ga0495625_0027647 3300046660 Bacteria 4264
114 Ga0495635_0006083 3300046663 Bacteria 8417
115 Ga0495661_0017009 3300046665 Bacteria 4805
116 Ga0495588_0002297 3300046674 Bacteria 8183
117 Ga0495588_0045697 3300046674 Bacteria 2245
118 Ga0495657_0001413 3300046675 Bacteria 20770
119 Ga0495657_0012620 3300046675 Bacteria 6270
120 Ga0495657_0060475 3300046675 Bacteria 2509
121 Ga0495646_0006483 3300046680 Bacteria 7425
122 Ga0495613_0001711 3300046689 Bacteria 16709
123 Ga0495613_0002026 3300046689 Bacteria 15387
124 Ga0495613_0004686 3300046689 Bacteria 10261
125 Ga0495613_0005745 3300046689 Bacteria 9293
126 Ga0495613_0018198 3300046689 Bacteria 5238
127 Ga0495624_0024375 3300046690 Bacteria 3981
128 Ga0495649_0013805 3300046694 Bacteria 4649
129 Ga0495589_0010046 3300046794 Bacteria 4918
130 Ga0495589_0021782 3300046794 Bacteria 3275
131 Ga0495600_0004873 3300046809 Bacteria 8064
132 Ga0495600_0005748 3300046809 Bacteria 7493
133 Ga0495660_0052156 3300046810 Bacteria 2223
134 Ga0495581_0004418 3300047315 Bacteria 8130
135 Ga0495581_0011314 3300047315 Bacteria 5161
136 Ga0495604_0000703 3300047317 Bacteria 28422
137 Ga0495604_0019382 3300047317 Bacteria 5444
138 Ga0495636_0004842 3300047318 Bacteria 5272
139 Ga0495676_0004378 3300047321 Bacteria 12902
140 Ga0495676_0009985 3300047321 Bacteria 8624
141 Ga0495676_0035638 3300047321 Bacteria 4160
142 Ga0495676_0046173 3300047321 Bacteria 3538
143 Ga0495676_0060233 3300047321 Bacteria 2976
144 Ga0495676_0064038 3300047321 Bacteria 2862
145 Ga0495680_0019374 3300047322 Bacteria 5743
146 Ga0495683_0016715 3300047323 Bacteria 3807
147 Ga0495687_025492 3300047443 Bacteria 2794
148 Ga0495687_031961 3300047443 Bacteria 2408
149 Ga0495685_000195 3300047447 Bacteria 20370
150 Ga0495685_001405 3300047447 Bacteria 7351
151 Ga0495681_0001870 3300047470 Bacteria 15461
152 Ga0495681_0007715 3300047470 Bacteria 6824
153 Ga0495686_0020497 3300047472 Bacteria 4407
154 Ga0495593_0012125 3300047673 Bacteria 4932
155 Ga0495593_0017265 3300047673 Bacteria 4061
156 Ga0495614_0002671 3300048089 Bacteria 7926
157 Ga0495614_0021304 3300048089 Bacteria 2799
158 Ga0495626_0005060 3300048091 Bacteria 7864
159 Ga0496102_0012219 3300048905 Bacteria 7425
160 Ga0496109_0066334 3300048912 Bacteria 3305
161 Ga0496109_0113235 3300048912 Bacteria 2523
162 Ga0496114_0004396 3300048917 Bacteria 10927
163 Ga0496114_0033536 3300048917 Bacteria 4231
164 Ga0501031_0005824 3300049568 Bacteria 8029
165 Ga0501031_0028072 3300049568 Bacteria 3668
166 Ga0501032_0010067 3300049569 Bacteria 6824
167 Ga0501032_0014834 3300049569 Bacteria 5514
168 Ga0501032_0024138 3300049569 Bacteria 4199
169 Ga0501033_0004814 3300049570 Bacteria 10784
170 Ga0501033_0011264 3300049570 Bacteria 6845
171 Ga0501033_0035628 3300049570 Bacteria 3730
172 Ga0501033_0045644 3300049570 Bacteria 3260
173 Ga0501034_0004090 3300049571 Bacteria 16369
174 Ga0501034_0021466 3300049571 Bacteria 6583
175 Ga0501034_0026482 3300049571 Bacteria 5905
176 Ga0501034_0059332 3300049571 Bacteria 3843
177 Ga0501036_0009705 3300049572 Bacteria 7922
178 Ga0501036_0033481 3300049572 Bacteria 4346
179 Ga0501038_0002326 3300049574 Bacteria 17687
180 Ga0501038_0004052 3300049574 Bacteria 13622
181 Ga0501038_0007725 3300049574 Bacteria 9916
182 Ga0501038_0121957 3300049574 Bacteria 2148
183 Ga0501039_0009417 3300049575 Bacteria 7445
184 Ga0501039_0031369 3300049575 Bacteria 4097
185 Ga0501040_0070103 3300049576 Bacteria 2419
186 Ga0501041_0000703 3300049577 Bacteria 17796
187 Ga0501041_0006781 3300049577 Bacteria 6711
188 Ga0501042_0021477 3300049578 Bacteria 4499
189 Ga0501042_0024066 3300049578 Bacteria 4268
190 Ga0501043_0003835 3300049579 Bacteria 12361
191 Ga0501043_0006236 3300049579 Bacteria 9572
192 Ga0501043_0033621 3300049579 Bacteria 4034
193 Ga0501046_0002135 3300049580 Bacteria 18685
194 Ga0501046_0103519 3300049580 Bacteria 2182
195 Ga0501047_0000336 3300049581 Bacteria 53637
196 Ga0501047_0038898 3300049581 Bacteria 4601
197 Ga0501047_0039031 3300049581 Bacteria 4593
198 Ga0501047_0131931 3300049581 Bacteria 2378
199 Ga0501048_0007831 3300049582 Bacteria 8094
200 Ga0501048_0019920 3300049582 Bacteria 4918
201 Ga0501048_0070302 3300049582 Bacteria 2472
202 Ga0501067_0002184 3300049583 Bacteria 10792
203 Ga0501068_0005585 3300049584 Bacteria 6887
204 Ga0501068_0051931 3300049584 Bacteria 2481
205 Ga0501069_0005802 3300049585 Bacteria 6428
206 Ga0501070_0032133 3300049586 Bacteria 4393
207 Ga0501070_0160163 3300049586 Bacteria 1856
208 Ga0501071_0008461 3300049587 Bacteria 6804
209 Ga0501071_0031502 3300049587 Bacteria 3759
210 Ga0501072_0001019 3300049588 Bacteria 20746
211 Ga0501073_0030186 3300049589 Bacteria 3871
212 Ga0501074_0092139 3300049590 Bacteria 2170
213 Ga0501075_0024394 3300049591 Bacteria 4434
214 Ga0501076_0011941 3300049592 Bacteria 6487
215 Ga0501076_0036101 3300049592 Bacteria 3871
216 Ga0501077_0048170 3300049593 Bacteria 2707
217 Ga0501235_001140 3300049669 Bacteria 5574
218 Ga0501225_0003725 3300049705 Bacteria 4588
219 Ga0501079_0115379 3300049741 Bacteria 2087
220 Ga0501080_0027919 3300049742 Bacteria 5248
221 Ga0501083_0004283 3300049744 Bacteria 10045
222 Ga0501035_0000762 3300049822 Bacteria 34623
223 Ga0501035_0042823 3300049822 Bacteria 4082
224 Ga0501035_0056741 3300049822 Bacteria 3493
225 Ga0501044_0001145 3300049823 Bacteria 31413
226 Ga0501044_0001268 3300049823 Bacteria 29826
227 Ga0501045_0006000 3300049824 Bacteria 8406
228 Ga0501045_0009566 3300049824 Bacteria 6781
229 nmdc:mga0yw44_3783_c1 3300050492 Bacteria 6791
230 nmdc:mga06z11_6526_c1 3300050494 Bacteria 4755
231 nmdc:mga09592_150355_c1 3300050508 Bacteria 2009
232 nmdc:mga0qj67_25167_c1 3300050509 Bacteria 4596
233 Ga0500556_0000458 3300053104 Bacteria 28893
234 Ga0500652_004591 3300053131 Bacteria 4284
235 Ga0500652_006043 3300053131 Bacteria 3865
236 Ga0500658_0006061 3300053134 Bacteria 4493
237 Ga0500559_0005757 3300053136 Bacteria 5655
238 Ga0500561_0000372 3300053137 Bacteria 7404
239 Ga0500634_0003783 3300053161 Bacteria 6839
240 Ga0500587_000486 3300053739 Bacteria 4782
241 Ga0501084_0000962 3300054114 Bacteria 22310
242 Ga0501082_0049050 3300060353 Bacteria 3640
243 Ga0466962_0013635 3300061719 Bacteria 3912
244 Ga0530510_0011430 3300061734 Bacteria 6229
245 3006429508 3006425503 Bacteria 6491253
246 2516086879 2515154202 Bacteria 5471270
247 2547410949 2547132111 Bacteria 8013147
248 2585296322 2582581312 Bacteria 7308206
249 2585307074 2582581313 Bacteria 10042643
250 2585320484 2582581314 Bacteria 11452267
251 2616697020 2616644814 Bacteria 11555299
252 2643941602 2643221587 Bacteria 7586415
253 2644263640 2643221647 Bacteria 10741251
254 2644386627 2643221670 Bacteria 6497041
255 2644428686 2643221677 Bacteria 7584031
256 2644439752 2643221678 Bacteria 9540101
257 2644632919 2643221714 Bacteria 9015452
258 2784590155 2784132148 Bacteria 8627943
259 2785341469 2784746763 Bacteria 9783172
260 2785371203 2784746768 Bacteria 10036182
261 2786672389 2786546132 Bacteria 10419719
262 2793984894 2791355406 Bacteria 11364898
263 2808843759 2808606359 Bacteria 9866990
264 2808913304 2808606375 Bacteria 9466072
265 2809233809 2808606448 Bacteria 8656184
266 2811844713 2808606982 Bacteria 7791042
267 2812479021 2811994917 Bacteria 7761064
268 2819740865 2818991472 Bacteria 10089953
269 2837272850 2837268691 Bacteria 7850704
270 2852642003 2852635781 Bacteria 8251373
271 2862179251 2862178590 Bacteria 8583590
272 2862287439 2862281513 Bacteria 9621493
273 2862293077 2862290372 Bacteria 7471434
274 2862386437 2862382967 Bacteria 10317375
275 2862513205 2862507626 Bacteria 9425308
276 2862577797 2862574272 Bacteria 10567477
277 2863408341 2863404153 Bacteria 9672205
278 2867349424 2867346516 Bacteria 7608576
279 2867373615 2867369537 Bacteria 6501581
280 2867436620 2867428634 Bacteria 9590268
281 2868091781 2868088558 Bacteria 7609351
282 2870729948 2870721527 Bacteria 9689237
283 2877679395 2877676314 Bacteria 9512378
284 2912717992 2912715099 Bacteria 9460473
285 2912730422 2912723979 Bacteria 8557534
286 2912762493 2912757875 Bacteria 7940295
287 2918506216 2918501144 Bacteria 8668083
288 2919450760 2919446982 Bacteria 3994487
289 2919474265 2919468124 Bacteria 9133025
290 2935391616 2935390628 Bacteria 7043367
291 2947227230 2947224130 Bacteria 9938529
292 2954384286 2954380949 Bacteria 10050426
293 2954678657 2954673503 Bacteria 9685905
294 2954685499 2954682443 Bacteria 9862841
295 2954695107 2954691527 Bacteria 10720516
296 2954710282 2954701450 Bacteria 10834262
297 2954714598 2954711539 Bacteria 10867210
298 2954724543 2954721474 Bacteria 10456478
299 2954737276 2954731030 Bacteria 10243860
300 2954756126 2954749733 Bacteria 10366972
301 2954762421 2954759201 Bacteria 9358192
302 2990048443 2990044586 Bacteria 6603797
303 2990066011 2990059506 Bacteria 9321252
304 2990089167 2990088156 Bacteria 6657676
305 2997453333 2997451912 Bacteria 8492419
306 2997603152 2997600082 Bacteria 9896405
307 3006323928 3006321560 Bacteria 8247479
308 3006491505 3006486233 Bacteria 8157040
309 3006498681 3006493962 Bacteria 8825450
310 8008562506 8008558824 Bacteria 10610750
311 8008577437 8008574985 Bacteria 7815457
312 8023628923 8023623736 Bacteria 8593882
313 8025537537 8025530807 Bacteria 8495698
314 8047896430 8047893842 Bacteria 11723082
315 8048135699 8048127548 Bacteria 11053136
316 8048362505 8048356638 Bacteria 11044339
317 8048373439 8048369669 Bacteria 11666822
318 8048384803 8048379754 Bacteria 11877923
319 8048406722 8048406513 Bacteria 8936924
320 8054613932 8054609563 Bacteria 5170090
321 8056672134 8056667051 Bacteria 6953971
322 Ga0006562J51391_1129345
323 Ga0006562J51391_1129346
324 Ga0070658_10003610
325 Ga0070689_100040336
326 Ga0070714_100002831
327 Ga0070705_100039236
328 Ga0070708_100002538
329 Ga0070708_100093604
330 Ga0070699_100003942
331 Ga0075367_10008157
332 Ga0075428_100061046
333 Ga0075430_100005643
334 Ga0075431_100014434
335 Ga0105240_10090518
336 Ga0114129_10007247
337 Ga0114129_10008005
338 Ga0105242_10035084
339 Ga0157378_10121414
340 Ga0157375_10128307
341 Ga0182008_10005286
342 Ga0182007_10000370
343 Ga0183367_1002
344 Ga0213875_10013363
345 Ga0209758_1011481
346 Ga0207426_1003294
347 Ga0207705_10007708
348 Ga0207708_10097502
349 Ga0265334_10008757
350 Ga0307517_10004859
351 Ga0307517_10020507
352 Ga0307515_10019680
353 Ga0307511_10000701
354 Ga0307512_10000716
355 Ga0307508_10004014
356 Ga0307508_10005903
357 Ga0307508_10010497
358 Ga0307514_10005164
359 Ga0265314_10045777
360 Ga0307516_10001020
361 Ga0307516_10011608
362 Ga0307516_10070884
363 Ga0307409_100013872
364 Ga0307507_10086071
365 Ga0307510_10045222
366 Ga0373927_0018847
367 Ga0373925_0002530
368 Ga0395898_0006049
369 Ga0395898_0116350
370 Ga0395905_0046857
371 Ga0436364_1348411
372 Ga0395901_0014055
373 Ga0395901_0181714
374 Ga0439436_0000266
375 Ga0451837_1384592
376 Ga0439449_0000647
377 Ga0439449_0010231
378 Ga0439457_000058
379 Ga0450894_000145
380 Ga0439458_0004221
381 Ga0466972_0004763
382 Ga0466972_0041973
383 Ga0466966_0035439
384 Ga0466963_0000478
385 Ga0466971_0000952
386 Ga0466971_0008506
387 Ga0466970_0000504
388 Ga0466970_0008265
389 Ga0466970_0016063
390 Ga0466959_0049033
391 Ga0466967_0002866
392 Ga0495592_0046351
393 Ga0495592_0053406
394 Ga0495603_0001181
395 Ga0495603_0001438
396 Ga0495603_0001724
397 Ga0495603_0035011
398 Ga0495629_0002037
399 Ga0495629_0003002
400 Ga0495629_0005707
401 Ga0495629_0009492
402 Ga0495629_0017978
403 Ga0495638_0010288
404 Ga0495638_0033752
405 Ga0495651_0006819
406 Ga0495651_0024538
407 Ga0495582_0000326
408 Ga0495662_0000955
409 Ga0495662_0005268
410 Ga0495585_0010912
411 Ga0495594_0000221
412 Ga0495594_0017718
413 Ga0495607_0011472
414 Ga0495608_0074377
415 Ga0495616_0007322
416 Ga0495628_0061887
417 Ga0495628_0078729
418 Ga0495630_0052206
419 Ga0495631_0008193
420 Ga0495632_0016866
421 Ga0495643_0000832
422 Ga0495643_0001743
423 Ga0495642_0017666
424 Ga0495652_0030265
425 Ga0495640_0005244
426 Ga0495640_0074561
427 Ga0495587_0008029
428 Ga0495609_0009483
429 Ga0495667_0069462
430 Ga0495668_0010598
431 Ga0495634_0003504
432 Ga0495634_0007769
433 Ga0495625_0007698
434 Ga0495625_0027647
435 Ga0495635_0006083
436 Ga0495661_0017009
437 Ga0495588_0002297
438 Ga0495588_0045697
439 Ga0495657_0001413
440 Ga0495657_0012620
441 Ga0495657_0060475
442 Ga0495646_0006483
443 Ga0495613_0001711
444 Ga0495613_0002026
445 Ga0495613_0004686
446 Ga0495613_0005745
447 Ga0495613_0018198
448 Ga0495624_0024375
449 Ga0495649_0013805
450 Ga0495589_0010046
451 Ga0495589_0021782
452 Ga0495600_0004873
453 Ga0495600_0005748
454 Ga0495660_0052156
455 Ga0495581_0004418
456 Ga0495581_0011314
457 Ga0495604_0000703
458 Ga0495604_0019382
459 Ga0495636_0004842
460 Ga0495676_0004378
461 Ga0495676_0009985
462 Ga0495676_0035638
463 Ga0495676_0046173
464 Ga0495676_0060233
465 Ga0495676_0064038
466 Ga0495680_0019374
467 Ga0495683_0016715
468 Ga0495687_025492
469 Ga0495687_031961
470 Ga0495685_000195
471 Ga0495685_001405
472 Ga0495681_0001870
473 Ga0495681_0007715
474 Ga0495686_0020497
475 Ga0495593_0012125
476 Ga0495593_0017265
477 Ga0495614_0002671
478 Ga0495614_0021304
479 Ga0495626_0005060
480 Ga0496102_0012219
481 Ga0496109_0066334
482 Ga0496109_0113235
483 Ga0496114_0004396
484 Ga0496114_0033536
485 Ga0501031_0005824
486 Ga0501031_0028072
487 Ga0501032_0010067
488 Ga0501032_0014834
489 Ga0501032_0024138
490 Ga0501033_0004814
491 Ga0501033_0011264
492 Ga0501033_0035628
493 Ga0501033_0045644
494 Ga0501034_0004090
495 Ga0501034_0021466
496 Ga0501034_0026482
497 Ga0501034_0059332
498 Ga0501036_0009705
499 Ga0501036_0033481
500 Ga0501038_0002326
501 Ga0501038_0004052
502 Ga0501038_0007725
503 Ga0501038_0121957
504 Ga0501039_0009417
505 Ga0501039_0031369
506 Ga0501040_0070103
507 Ga0501041_0000703
508 Ga0501041_0006781
509 Ga0501042_0021477
510 Ga0501042_0024066
511 Ga0501043_0003835
512 Ga0501043_0006236
513 Ga0501043_0033621
514 Ga0501046_0002135
515 Ga0501046_0103519
516 Ga0501047_0000336
517 Ga0501047_0038898
518 Ga0501047_0039031
519 Ga0501047_0131931
520 Ga0501048_0007831
521 Ga0501048_0019920
522 Ga0501048_0070302
523 Ga0501067_0002184
524 Ga0501068_0005585
525 Ga0501068_0051931
526 Ga0501069_0005802
527 Ga0501070_0032133
528 Ga0501070_0160163
529 Ga0501071_0008461
530 Ga0501071_0031502
531 Ga0501072_0001019
532 Ga0501073_0030186
533 Ga0501074_0092139
534 Ga0501075_0024394
535 Ga0501076_0011941
536 Ga0501076_0036101
537 Ga0501077_0048170
538 Ga0501235_001140
539 Ga0501225_0003725
540 Ga0501079_0115379
541 Ga0501080_0027919
542 Ga0501083_0004283
543 Ga0501035_0000762
544 Ga0501035_0042823
545 Ga0501035_0056741
546 Ga0501044_0001145
547 Ga0501044_0001268
548 Ga0501045_0006000
549 Ga0501045_0009566
550 nmdc:mga0yw44_3783_c1
551 nmdc:mga06z11_6526_c1
552 nmdc:mga09592_150355_c1
553 nmdc:mga0qj67_25167_c1
554 Ga0500556_0000458
555 Ga0500652_004591
556 Ga0500652_006043
557 Ga0500658_0006061
558 Ga0500559_0005757
559 Ga0500561_0000372
560 Ga0500634_0003783
561 Ga0500587_000486
562 Ga0501084_0000962
563 Ga0501082_0049050
564 Ga0466962_0013635
565 Ga0530510_0011430
566 3006429508
567 2516086879
568 2547410949
569 2585296322
570 2585307074
571 2585320484
572 2616697020
573 2643941602
574 2644263640
575 2644386627
576 2644428686
577 2644439752
578 2644632919
579 2784590155
580 2785341469
581 2785371203
582 2786672389
583 2793984894
584 2808843759
585 2808913304
586 2809233809
587 2811844713
588 2812479021
589 2819740865
590 2837272850
591 2852642003
592 2862179251
593 2862287439
594 2862293077
595 2862386437
596 2862513205
597 2862577797
598 2863408341
599 2867349424
600 2867373615
601 2867436620
602 2868091781
603 2870729948
604 2877679395
605 2912717992
606 2912730422
607 2912762493
608 2918506216
609 2919450760
610 2919474265
611 2935391616
612 2947227230
613 2954384286
614 2954678657
615 2954685499
616 2954695107
617 2954710282
618 2954714598
619 2954724543
620 2954737276
621 2954756126
622 2954762421
623 2990048443
624 2990066011
625 2990089167
626 2997453333
627 2997603152
628 3006323928
629 3006491505
630 3006498681
631 8008562506
632 8008577437
633 8023628923
634 8025537537
635 8047896430
636 8048135699
637 8048362505
638 8048373439
639 8048384803
640 8048406722
641 8054613932
642 8056672134

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00890

FAD_binding_2

FAD binding domain

7

467

0.93

PF02910

Succ_DH_flav_C

Fumarate reductase flavoprotein C-term

550

656

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6hrd-assembly2.cif.gz_D crystal structure of m. tuberculosis fadb2 (rv0468) 0.9995 10 37
3ado-assembly1.cif.gz_A crystal structure of the rabbit l-gulonate 3-dehydrogenase 0.9933 10 37
1vg9-assembly3.cif.gz_E the crystal structures of the rep-1 protein in complex with c-terminally truncated rab7 protein 0.971 8 37
3hdq-assembly1.cif.gz_A crystal structure of udp-galactopyranose mutase (oxidized form) in complex with substrate 0.9628 9 37
8a3x-assembly1.cif.gz_B imine reductase from ensifer adhaerens in complex with nadp+ 0.9615 10 37
ID Description Score Start End Superfamily
6hrdB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 1.001 10 37 3.40.50.720
af_Q4CWB6_396_583_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9988 10 36 3.40.50.720
1mfzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9787 11 40 3.40.50.720
af_Q60356_412_526_1.20.58.100 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.9728 488 586 1.20.58.100
af_K8F7V7_1826_1944_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9726 11 38 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A538R4C7-F1-model_v4 Fumarate reductase/succinate dehydrogenase flavoprotein subunit 0.9611 464 585 GO:0016491
AF-A0A3C1CJ60-F1-model_v4 Fumarate reductase/succinate dehydrogenase flavoprotein subunit 0.9594 247 369 GO:0016491
AF-A0A3C1CJ60-F1-model_v4 Fumarate reductase/succinate dehydrogenase flavoprotein subunit 0.9518 247 369 GO:0016491
AF-A0A3L7TAG7-F1-model_v4 Fumarate reductase/succinate dehydrogenase flavoprotein subunit 0.948 425 628 GO:0016491
AF-A0A6J7T7D6-F1-model_v4 Unannotated protein 0.9413 374 644 GO:0016491

Map