F406057

General Info

Members Datasets Scaffolds Average Seq Length
321 205 642 519

Family's Representative Sequence

Representative Sequence 3300032133|Ga0316583_10001922|Ga0316583_100019226
Length 549
Sequence MTGGGNVGIQSDVRRRYDGDTLSGMTVARAGQISAARSALARGDLRTTHRLAAALVADDFRDAEAHFLLGIAESSAGRAQAGIQHVGRAVMLDPQGEYRAQLAKLYTLVRRDGDAAATLRDAEQALPADALSRDTMGCVYARLGDHAAALPHFAEAVRLDPRNSEFRYNQAAALNFLGRVDEAEAALEALVALAPGDARAHHLLAGLRKQSPGRNHVDRLARTRANARDGRDRLLLGYALAKELEDIGEAGEALDVLCAANAEHRKALAYDFERDAASFDAIEASWPSIAAAPVTDLPQDAPIFIIGMPRTGTTLVDRILSSHPDVESAGELQAIPLAVKKAAGTRSPTVLDPETIAAGATKDMGAIGRDFMQMASHHRRDRARRFTDKFPGNFQYAGFIARALPSASIVCLRRHPMDTVLSNFRNLFAISSRYYDYSYDLLDIAAYYTRFDRLMAMWREALPGRVLEVRYEDLVADQEGETRRLLAHCGLEWSGACLDFHSNSAPVSTPSAAQVRRPIYKDAVARWKRHAGVLEPVRRFFEEKGIAVD

Samples

Sample ID Description Type Environment
1 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
4 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
5 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
6 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
7 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
8 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
9 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
10 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
11 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
12 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
13 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
14 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
15 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
16 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
17 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
20 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
21 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
22 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
23 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
24 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
25 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
26 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
27 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
28 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
29 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
30 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
31 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
32 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
33 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
34 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
35 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
36 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
37 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
38 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
39 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
44 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
51 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
52 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
53 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
58 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
61 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
66 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
69 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
70 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
71 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
77 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
78 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
79 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
80 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
81 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
82 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
86 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
126 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
127 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
128 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
129 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
130 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
131 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
132 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
133 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
134 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
135 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
136 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
137 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
138 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
139 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
140 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
141 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
142 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
143 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
144 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
145 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
146 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
147 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
148 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
149 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
150 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
151 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
152 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
153 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
154 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
155 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
156 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
157 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
158 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
159 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
160 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
161 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
162 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
163 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
164 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
165 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
166 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
167 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
168 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
169 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
170 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
171 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
172 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
173 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
174 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
175 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
176 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
177 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
178 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
179 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
180 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
181 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
182 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
183 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
184 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
185 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
186 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
187 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
188 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
189 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
190 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
191 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
192 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
193 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
194 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
195 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
196 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
197 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
198 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
199 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
200 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
201 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
202 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
203 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
204 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
205 3000865235 Altericroceibacterium indicum DSM 18604 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.02
Metatranscriptomes 0
Isolates 4.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.1
Nodule 0.31
Rhizoplane 7.17
Rhizosphere 67.6
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316583_10001922 3300032133 Bacteria 7101
2 SwRhRL2b_contig_2866031 2162886007 Bacteria 47061
3 JGI24741J21665_1001073 3300001915 Bacteria 8177
4 JGI24752J21851_1000002 3300001976 Bacteria 30697
5 JGI24740J21852_10001556 3300001979 Bacteria 10534
6 JGI24739J22299_10013675 3300001989 Bacteria 2958
7 JGI24737J22298_10000199 3300001990 Bacteria 19560
8 JGI24735J21928_10002852 3300002067 Bacteria 5961
9 JGI24750J21931_1000156 3300002070 Bacteria 11379
10 JGI24748J21848_1000194 3300002074 Bacteria 7748
11 JGI24738J21930_10000557 3300002075 Bacteria 10660
12 JGI24034J26672_10000018 3300002239 Bacteria 130180
13 JGI24742J22300_10002034 3300002244 Bacteria 3230
14 JGI24751J29686_10002103 3300002459 Bacteria 4040
15 JGI25165J46597_1000098 3300003214 Bacteria 159458
16 JGI25153J46596_10000011 3300003215 Bacteria 319992
17 JGI25153J46596_10001787 3300003215 Bacteria 12757
18 rootH1_10158575 3300003323 Bacteria 2866
19 Ga0065165_1003534 3300005262 Bacteria 10817
20 Ga0065165_1004405 3300005262 Bacteria 8771
21 Ga0065704_10000192 3300005289 Bacteria 216848
22 Ga0065704_10006756 3300005289 Bacteria 6906
23 Ga0065704_10070524 3300005289 Bacteria 21773
24 Ga0065704_10078556 3300005289 Bacteria 4395
25 Ga0065707_10081906 3300005295 Bacteria 29976
26 Ga0065707_10082725 3300005295 Bacteria 12483
27 Ga0070658_10000312 3300005327 Bacteria 41829
28 Ga0070658_10000540 3300005327 Bacteria 32841
29 Ga0070690_100000008 3300005330 Bacteria 118441
30 Ga0070670_100055293 3300005331 Bacteria 3407
31 Ga0068869_100000312 3300005334 Bacteria 25816
32 Ga0070666_10000032 3300005335 Bacteria 129142
33 Ga0068868_100000025 3300005338 Bacteria 82086
34 Ga0070660_100000356 3300005339 Bacteria 30507
35 Ga0070668_100026780 3300005347 Bacteria 4376
36 Ga0070668_100035469 3300005347 Bacteria 3803
37 Ga0070669_100000050 3300005353 Bacteria 115079
38 Ga0070669_100000135 3300005353 Bacteria 66559
39 Ga0070669_100000268 3300005353 Bacteria 42681
40 Ga0070669_100050763 3300005353 Bacteria 3030
41 Ga0070671_100010123 3300005355 Bacteria 7575
42 Ga0070671_100017791 3300005355 Bacteria 5764
43 Ga0070674_100000271 3300005356 Bacteria 25483
44 Ga0070673_100000016 3300005364 Bacteria 114927
45 Ga0070673_100143797 3300005364 Bacteria 2014
46 Ga0070688_100000862 3300005365 Bacteria 15065
47 Ga0070667_100000864 3300005367 Bacteria 28131
48 Ga0070667_100004819 3300005367 Bacteria 11301
49 Ga0070667_100005491 3300005367 Bacteria 10585
50 Ga0070663_100011117 3300005455 Bacteria 5637
51 Ga0070662_100046136 3300005457 Bacteria 3130
52 Ga0070685_10000046 3300005466 Bacteria 73999
53 Ga0070672_100044069 3300005543 Bacteria 3444
54 Ga0070686_100000030 3300005544 Bacteria 118308
55 Ga0070665_100000056 3300005548 Bacteria 242622
56 Ga0070665_100001239 3300005548 Bacteria 30984
57 Ga0070665_100032831 3300005548 Bacteria 5223
58 Ga0070665_100073901 3300005548 Bacteria 3415
59 Ga0068855_100004242 3300005563 Bacteria 17504
60 Ga0068855_100080899 3300005563 Bacteria 3767
61 Ga0070664_100019856 3300005564 Bacteria 5530
62 Ga0068857_100016606 3300005577 Bacteria 6449
63 Ga0068857_100022863 3300005577 Bacteria 5500
64 Ga0068856_100002943 3300005614 Bacteria 17457
65 Ga0068856_100066351 3300005614 Bacteria 3566
66 Ga0068859_100104066 3300005617 Bacteria 2897
67 Ga0068864_100030252 3300005618 Bacteria 4589
68 Ga0068864_100084346 3300005618 Bacteria 2791
69 Ga0068863_100000016 3300005841 Bacteria 213575
70 Ga0068863_100000065 3300005841 Bacteria 117925
71 Ga0068863_100066054 3300005841 Bacteria 3422
72 Ga0068858_100001406 3300005842 Bacteria 24732
73 Ga0068858_100001714 3300005842 Bacteria 22407
74 Ga0068858_100026277 3300005842 Bacteria 5412
75 Ga0068858_100040128 3300005842 Bacteria 4340
76 Ga0068858_100069994 3300005842 Bacteria 3252
77 Ga0068860_100000132 3300005843 Bacteria 120657
78 Ga0068860_100000170 3300005843 Bacteria 106984
79 Ga0068860_100004344 3300005843 Bacteria 14481
80 Ga0068860_100064252 3300005843 Bacteria 3486
81 Ga0068862_100000241 3300005844 Bacteria 60756
82 Ga0068862_100004313 3300005844 Bacteria 12036
83 Ga0081455_10000775 3300005937 Bacteria 41115
84 Ga0081539_10018486 3300005985 Bacteria 4834
85 Ga0075366_10001073 3300006195 Bacteria 13437
86 Ga0075429_100109537 3300006880 Bacteria 2414
87 Ga0068865_100000047 3300006881 Bacteria 68268
88 Ga0097620_100104077 3300006931 Bacteria 2897
89 Ga0079104_1010984 3300006946 Bacteria 2944
90 Ga0105251_10028584 3300009011 Bacteria 2816
91 Ga0105240_10063283 3300009093 Bacteria 4602
92 Ga0105245_10000078 3300009098 Bacteria 100583
93 Ga0105245_10001099 3300009098 Bacteria 24505
94 Ga0105247_10111521 3300009101 Bacteria 1761
95 Ga0105243_10000058 3300009148 Bacteria 131551
96 Ga0105243_10001200 3300009148 Bacteria 23322
97 Ga0105243_10026043 3300009148 Bacteria 4475
98 Ga0105242_10000609 3300009176 Bacteria 27969
99 Ga0105248_10007381 3300009177 Bacteria 12066
100 Ga0105237_10010748 3300009545 Bacteria 9712
101 Ga0105238_10009386 3300009551 Bacteria 9792
102 Ga0105238_10175237 3300009551 Bacteria 2121
103 Ga0105249_10000109 3300009553 Bacteria 112308
104 Ga0105249_10004658 3300009553 Bacteria 11845
105 Ga0105148_100076 3300009978 Bacteria 15105
106 Ga0105246_10001073 3300011119 Bacteria 15795
107 Ga0157373_10063633 3300013100 Bacteria 2612
108 Ga0157371_10037847 3300013102 Bacteria 3452
109 Ga0157374_10000087 3300013296 Bacteria 91263
110 Ga0157378_10000083 3300013297 Bacteria 87820
111 Ga0157378_10075668 3300013297 Bacteria 3032
112 Ga0157375_10006471 3300013308 Bacteria 10207
113 Ga0157380_10011136 3300014326 Bacteria 6489
114 Ga0157380_10013111 3300014326 Bacteria 6033
115 Ga0157377_10003677 3300014745 Bacteria 6959
116 Ga0157379_10017136 3300014968 Bacteria 6380
117 Ga0157376_10000071 3300014969 Bacteria 82759
118 Ga0163161_10000084 3300017792 Bacteria 93742
119 Ga0163161_10001317 3300017792 Bacteria 18501
120 Ga0209437_101054 3300025233 Bacteria 9119
121 Ga0209233_1000026 3300025261 Bacteria 678466
122 Ga0209565_1000012 3300025263 Bacteria 606500
123 Ga0209673_1001022 3300025273 Bacteria 33296
124 Ga0209675_1004440 3300025291 Bacteria 6229
125 Ga0209758_1000007 3300025297 Bacteria 1270410
126 Ga0209758_1011709 3300025297 Bacteria 5037
127 Ga0209050_1005779 3300025298 Bacteria 7614
128 Ga0209256_1000012 3300025299 Bacteria 790371
129 Ga0209257_1001677 3300025304 Bacteria 24988
130 Ga0207713_1006690 3300025735 Bacteria 6970
131 Ga0207713_1013030 3300025735 Bacteria 4411
132 Ga0207680_10000009 3300025903 Bacteria 464571
133 Ga0207647_10001158 3300025904 Bacteria 20338
134 Ga0207705_10000184 3300025909 Bacteria 65262
135 Ga0207705_10000346 3300025909 Bacteria 41835
136 Ga0207657_10001334 3300025919 Bacteria 26215
137 Ga0207657_10011393 3300025919 Bacteria 8827
138 Ga0207681_10000068 3300025923 Bacteria 97190
139 Ga0207681_10000198 3300025923 Bacteria 48114
140 Ga0207681_10001366 3300025923 Bacteria 15749
141 Ga0207694_10166892 3300025924 Bacteria 1781
142 Ga0207687_10002035 3300025927 Bacteria 13862
143 Ga0207644_10000396 3300025931 Bacteria 28366
144 Ga0207644_10016993 3300025931 Bacteria 4904
145 Ga0207706_10001487 3300025933 Bacteria 23284
146 Ga0207706_10005997 3300025933 Bacteria 11298
147 Ga0207706_10134815 3300025933 Bacteria 2172
148 Ga0207686_10000298 3300025934 Bacteria 36166
149 Ga0207709_10000202 3300025935 Bacteria 78416
150 Ga0207709_10000923 3300025935 Bacteria 22151
151 Ga0207669_10000127 3300025937 Bacteria 38104
152 Ga0207704_10000006 3300025938 Bacteria 220005
153 Ga0207689_10001091 3300025942 Bacteria 26155
154 Ga0207667_10117870 3300025949 Bacteria 2736
155 Ga0207651_10000001 3300025960 Bacteria 516823
156 Ga0207712_10000046 3300025961 Bacteria 162468
157 Ga0207712_10032802 3300025961 Bacteria 3507
158 Ga0207668_10002110 3300025972 Bacteria 11603
159 Ga0207668_10005179 3300025972 Bacteria 7667
160 Ga0207640_10063596 3300025981 Bacteria 2453
161 Ga0207658_10001377 3300025986 Bacteria 18975
162 Ga0207658_10001994 3300025986 Bacteria 15239
163 Ga0207658_10011981 3300025986 Bacteria 5914
164 Ga0207677_10000016 3300026023 Bacteria 153771
165 Ga0207703_10001092 3300026035 Bacteria 25775
166 Ga0207703_10017887 3300026035 Bacteria 5536
167 Ga0207703_10051011 3300026035 Bacteria 3351
168 Ga0207639_10000272 3300026041 Bacteria 37069
169 Ga0207639_10000311 3300026041 Bacteria 34425
170 Ga0207639_10000567 3300026041 Bacteria 25468
171 Ga0207678_10000007 3300026067 Bacteria 179943
172 Ga0207702_10000895 3300026078 Bacteria 30961
173 Ga0207641_10000063 3300026088 Bacteria 159283
174 Ga0207641_10000187 3300026088 Bacteria 86568
175 Ga0207641_10015783 3300026088 Bacteria 6187
176 Ga0207648_10000042 3300026089 Bacteria 114885
177 Ga0207676_10000938 3300026095 Bacteria 22527
178 Ga0207674_10047715 3300026116 Bacteria 4388
179 Ga0207674_10079177 3300026116 Bacteria 3291
180 Ga0207675_100002470 3300026118 Bacteria 18303
181 Ga0207683_10000488 3300026121 Bacteria 36595
182 Ga0207698_10001245 3300026142 Bacteria 14890
183 Ga0268266_10000066 3300028379 Bacteria 242637
184 Ga0268266_10001253 3300028379 Bacteria 31025
185 Ga0268266_10052041 3300028379 Bacteria 3516
186 Ga0268265_10000129 3300028380 Bacteria 96060
187 Ga0268265_10002617 3300028380 Bacteria 13381
188 Ga0268265_10048530 3300028380 Bacteria 3187
189 Ga0268264_10000040 3300028381 Bacteria 373714
190 Ga0268264_10000130 3300028381 Bacteria 181732
191 Ga0307508_10000816 3300031616 Bacteria 36416
192 Ga0307405_10004180 3300031731 Bacteria 6794
193 Ga0307405_10012735 3300031731 Bacteria 4466
194 Ga0307405_10084082 3300031731 Bacteria 2088
195 Ga0307410_10103333 3300031852 Bacteria 2046
196 Ga0307412_10002377 3300031911 Bacteria 10442
197 Ga0307411_10084269 3300032005 Bacteria 2198
198 Ga0316582_0001094 3300036647 Bacteria 11426
199 Ga0316584_0024111 3300036712 Bacteria 4450
200 Ga0466964_0039333 3300044706 Bacteria 1905
201 Ga0466971_0018159 3300044719 Bacteria 3114
202 Ga0466957_0003219 3300044842 Bacteria 8930
203 Ga0466960_0003119 3300044901 Bacteria 6349
204 Ga0466958_0008646 3300045836 Bacteria 5654
205 Ga0466967_0107198 3300045976 Bacteria 2562
206 Ga0495638_0010519 3300046460 Bacteria 6414
207 Ga0495638_0026806 3300046460 Bacteria 3734
208 Ga0495585_0001372 3300046492 Bacteria 19285
209 Ga0495583_0000279 3300046506 Bacteria 82827
210 Ga0495583_0022151 3300046506 Bacteria 3250
211 Ga0495610_0046137 3300046512 Bacteria 2152
212 Ga0495643_0002294 3300046522 Bacteria 15452
213 Ga0495643_0011736 3300046522 Bacteria 5316
214 Ga0495648_0000143 3300046524 Bacteria 85539
215 Ga0495663_0001578 3300046525 Bacteria 7148
216 Ga0495587_0011941 3300046536 Bacteria 5491
217 Ga0495668_0060469 3300046616 Bacteria 2090
218 Ga0495625_0000031 3300046660 Bacteria 238193
219 Ga0495625_0000088 3300046660 Bacteria 150352
220 Ga0495625_0047886 3300046660 Bacteria 3081
221 Ga0495649_0026398 3300046694 Bacteria 3229
222 Ga0495600_0000628 3300046809 Bacteria 18228
223 Ga0495683_0003663 3300047323 Bacteria 8899
224 Ga0495687_000455 3300047443 Bacteria 50452
225 Ga0495677_0002877 3300047445 Bacteria 6711
226 Ga0496100_0035666 3300048903 Bacteria 3130
227 Ga0496101_0011043 3300048904 Bacteria 5982
228 Ga0496102_0000122 3300048905 Bacteria 111166
229 Ga0496102_0000571 3300048905 Bacteria 39125
230 Ga0496102_0023106 3300048905 Bacteria 5517
231 Ga0496102_0160790 3300048905 Bacteria 2113
232 Ga0496103_0000056 3300048906 Bacteria 143579
233 Ga0496103_0000403 3300048906 Bacteria 38378
234 Ga0496103_0003479 3300048906 Bacteria 9627
235 Ga0496103_0045469 3300048906 Bacteria 2709
236 Ga0496104_0000105 3300048907 Bacteria 79841
237 Ga0496104_0021596 3300048907 Bacteria 5912
238 Ga0496105_0000057 3300048908 Bacteria 88084
239 Ga0496105_0002058 3300048908 Bacteria 14540
240 Ga0496105_0007929 3300048908 Bacteria 8251
241 Ga0496106_0060247 3300048909 Bacteria 2877
242 Ga0496107_0036026 3300048910 Bacteria 3548
243 Ga0496112_0057911 3300048915 Bacteria 3815
244 Ga0496112_0102309 3300048915 Bacteria 2835
245 Ga0496113_0000036 3300048916 Bacteria 56761
246 Ga0496113_0028616 3300048916 Bacteria 4010
247 Ga0496115_0000131 3300048918 Bacteria 68111
248 Ga0496116_0004492 3300048919 Bacteria 13289
249 Ga0496116_0010399 3300048919 Bacteria 7800
250 Ga0496116_0049794 3300048919 Bacteria 2797
251 Ga0496117_0001521 3300048920 Bacteria 33156
252 Ga0496117_0007439 3300048920 Bacteria 10699
253 Ga0496117_0015025 3300048920 Bacteria 6632
254 Ga0496117_0045911 3300048920 Bacteria 3149
255 Ga0496118_0001238 3300048921 Bacteria 39264
256 Ga0496118_0014624 3300048921 Bacteria 7335
257 Ga0496118_0104385 3300048921 Bacteria 1902
258 Ga0496119_0000079 3300048922 Bacteria 140247
259 Ga0496119_0003529 3300048922 Bacteria 16150
260 Ga0496120_0000506 3300048923 Bacteria 60652
261 Ga0496121_0000072 3300048924 Bacteria 244975
262 Ga0496121_0000114 3300048924 Bacteria 179427
263 Ga0496121_0000228 3300048924 Bacteria 120653
264 Ga0496121_0004513 3300048924 Bacteria 18645
265 Ga0496121_0005482 3300048924 Bacteria 16245
266 Ga0496122_0001515 3300048925 Bacteria 37040
267 Ga0496122_0005142 3300048925 Bacteria 15780
268 Ga0496123_0000627 3300048926 Bacteria 59185
269 Ga0496123_0004654 3300048926 Bacteria 14245
270 Ga0496123_0011705 3300048926 Bacteria 7568
271 Ga0496123_0012969 3300048926 Bacteria 7043
272 Ga0496123_0053584 3300048926 Bacteria 2664
273 Ga0496124_0000081 3300048927 Bacteria 208413
274 Ga0496124_0003460 3300048927 Bacteria 19291
275 Ga0496124_0007071 3300048927 Bacteria 12022
276 Ga0496124_0007123 3300048927 Bacteria 11972
277 Ga0496124_0077173 3300048927 Bacteria 2748
278 Ga0496124_0109361 3300048927 Bacteria 2228
279 Ga0496125_0001128 3300048928 Bacteria 40779
280 Ga0496125_0001706 3300048928 Bacteria 30600
281 Ga0496125_0002102 3300048928 Bacteria 26737
282 Ga0496125_0009750 3300048928 Bacteria 9804
283 Ga0496125_0026309 3300048928 Bacteria 5306
284 Ga0496126_0000103 3300048929 Bacteria 201037
285 Ga0496126_0001331 3300048929 Bacteria 39237
286 Ga0496126_0007283 3300048929 Bacteria 12162
287 Ga0496126_0019013 3300048929 Bacteria 6784
288 Ga0496126_0032545 3300048929 Bacteria 4911
289 Ga0496126_0044384 3300048929 Bacteria 4094
290 Ga0495682_0006697 3300049460 Bacteria 4651
291 Ga0501223_000007 3300049663 Bacteria 132601
292 Ga0501235_001246 3300049669 Bacteria 5366
293 Ga0501225_0000010 3300049705 Bacteria 82395
294 Ga0501245_000765 3300049708 Bacteria 4006
295 nmdc:mga0k408_7337_c1 3300050493 Bacteria 5888
296 Ga0500555_000121 3300053103 Bacteria 37468
297 Ga0500658_0003905 3300053134 Bacteria 5604
298 Ga0500658_0040135 3300053134 Bacteria 1873
299 Ga0500559_0012746 3300053136 Bacteria 3569
300 Ga0500573_0062793 3300053140 Bacteria 2126
301 Ga0500590_000416 3300053148 Bacteria 14356
302 Ga0500624_000132 3300053157 Bacteria 32467
303 Ga0500636_0002031 3300053177 Bacteria 11146
304 Ga0500625_000009 3300053729 Bacteria 159296
305 Ga0466962_0002512 3300061719 Bacteria 8711
306 2600228831 2599185359 Bacteria 4772316
307 2738709094 2738541275 Bacteria 4830863
308 2738847519 2738541301 Bacteria 4834102
309 2738863248 2738541304 Bacteria 4833665
310 2739295766 2738543022 Bacteria 4835059
311 2739357444 2738543033 Bacteria 4833336
312 2739649329 2739367664 Bacteria 4114334
313 2740027802 2739367865 Bacteria 4114482
314 2819714667 2818991466 Bacteria 4748179
315 2879166847 2879163058 Bacteria 4223965
316 2919142990 2919138771 Bacteria 5281312
317 2928102136 2928100450 Bacteria 4837635
318 2928529173 2928526807 Bacteria 4760224
319 2928962422 2928959182 Bacteria 4725774
320 2928968714 2928968154 Bacteria 4633371
321 3000866713 3000865235 Bacteria 3106258
322 Ga0316583_10001922
323 SwRhRL2b_contig_2866031
324 JGI24741J21665_1001073
325 JGI24752J21851_1000002
326 JGI24740J21852_10001556
327 JGI24739J22299_10013675
328 JGI24737J22298_10000199
329 JGI24735J21928_10002852
330 JGI24750J21931_1000156
331 JGI24748J21848_1000194
332 JGI24738J21930_10000557
333 JGI24034J26672_10000018
334 JGI24742J22300_10002034
335 JGI24751J29686_10002103
336 JGI25165J46597_1000098
337 JGI25153J46596_10000011
338 JGI25153J46596_10001787
339 rootH1_10158575
340 Ga0065165_1003534
341 Ga0065165_1004405
342 Ga0065704_10000192
343 Ga0065704_10006756
344 Ga0065704_10070524
345 Ga0065704_10078556
346 Ga0065707_10081906
347 Ga0065707_10082725
348 Ga0070658_10000312
349 Ga0070658_10000540
350 Ga0070690_100000008
351 Ga0070670_100055293
352 Ga0068869_100000312
353 Ga0070666_10000032
354 Ga0068868_100000025
355 Ga0070660_100000356
356 Ga0070668_100026780
357 Ga0070668_100035469
358 Ga0070669_100000050
359 Ga0070669_100000135
360 Ga0070669_100000268
361 Ga0070669_100050763
362 Ga0070671_100010123
363 Ga0070671_100017791
364 Ga0070674_100000271
365 Ga0070673_100000016
366 Ga0070673_100143797
367 Ga0070688_100000862
368 Ga0070667_100000864
369 Ga0070667_100004819
370 Ga0070667_100005491
371 Ga0070663_100011117
372 Ga0070662_100046136
373 Ga0070685_10000046
374 Ga0070672_100044069
375 Ga0070686_100000030
376 Ga0070665_100000056
377 Ga0070665_100001239
378 Ga0070665_100032831
379 Ga0070665_100073901
380 Ga0068855_100004242
381 Ga0068855_100080899
382 Ga0070664_100019856
383 Ga0068857_100016606
384 Ga0068857_100022863
385 Ga0068856_100002943
386 Ga0068856_100066351
387 Ga0068859_100104066
388 Ga0068864_100030252
389 Ga0068864_100084346
390 Ga0068863_100000016
391 Ga0068863_100000065
392 Ga0068863_100066054
393 Ga0068858_100001406
394 Ga0068858_100001714
395 Ga0068858_100026277
396 Ga0068858_100040128
397 Ga0068858_100069994
398 Ga0068860_100000132
399 Ga0068860_100000170
400 Ga0068860_100004344
401 Ga0068860_100064252
402 Ga0068862_100000241
403 Ga0068862_100004313
404 Ga0081455_10000775
405 Ga0081539_10018486
406 Ga0075366_10001073
407 Ga0075429_100109537
408 Ga0068865_100000047
409 Ga0097620_100104077
410 Ga0079104_1010984
411 Ga0105251_10028584
412 Ga0105240_10063283
413 Ga0105245_10000078
414 Ga0105245_10001099
415 Ga0105247_10111521
416 Ga0105243_10000058
417 Ga0105243_10001200
418 Ga0105243_10026043
419 Ga0105242_10000609
420 Ga0105248_10007381
421 Ga0105237_10010748
422 Ga0105238_10009386
423 Ga0105238_10175237
424 Ga0105249_10000109
425 Ga0105249_10004658
426 Ga0105148_100076
427 Ga0105246_10001073
428 Ga0157373_10063633
429 Ga0157371_10037847
430 Ga0157374_10000087
431 Ga0157378_10000083
432 Ga0157378_10075668
433 Ga0157375_10006471
434 Ga0157380_10011136
435 Ga0157380_10013111
436 Ga0157377_10003677
437 Ga0157379_10017136
438 Ga0157376_10000071
439 Ga0163161_10000084
440 Ga0163161_10001317
441 Ga0209437_101054
442 Ga0209233_1000026
443 Ga0209565_1000012
444 Ga0209673_1001022
445 Ga0209675_1004440
446 Ga0209758_1000007
447 Ga0209758_1011709
448 Ga0209050_1005779
449 Ga0209256_1000012
450 Ga0209257_1001677
451 Ga0207713_1006690
452 Ga0207713_1013030
453 Ga0207680_10000009
454 Ga0207647_10001158
455 Ga0207705_10000184
456 Ga0207705_10000346
457 Ga0207657_10001334
458 Ga0207657_10011393
459 Ga0207681_10000068
460 Ga0207681_10000198
461 Ga0207681_10001366
462 Ga0207694_10166892
463 Ga0207687_10002035
464 Ga0207644_10000396
465 Ga0207644_10016993
466 Ga0207706_10001487
467 Ga0207706_10005997
468 Ga0207706_10134815
469 Ga0207686_10000298
470 Ga0207709_10000202
471 Ga0207709_10000923
472 Ga0207669_10000127
473 Ga0207704_10000006
474 Ga0207689_10001091
475 Ga0207667_10117870
476 Ga0207651_10000001
477 Ga0207712_10000046
478 Ga0207712_10032802
479 Ga0207668_10002110
480 Ga0207668_10005179
481 Ga0207640_10063596
482 Ga0207658_10001377
483 Ga0207658_10001994
484 Ga0207658_10011981
485 Ga0207677_10000016
486 Ga0207703_10001092
487 Ga0207703_10017887
488 Ga0207703_10051011
489 Ga0207639_10000272
490 Ga0207639_10000311
491 Ga0207639_10000567
492 Ga0207678_10000007
493 Ga0207702_10000895
494 Ga0207641_10000063
495 Ga0207641_10000187
496 Ga0207641_10015783
497 Ga0207648_10000042
498 Ga0207676_10000938
499 Ga0207674_10047715
500 Ga0207674_10079177
501 Ga0207675_100002470
502 Ga0207683_10000488
503 Ga0207698_10001245
504 Ga0268266_10000066
505 Ga0268266_10001253
506 Ga0268266_10052041
507 Ga0268265_10000129
508 Ga0268265_10002617
509 Ga0268265_10048530
510 Ga0268264_10000040
511 Ga0268264_10000130
512 Ga0307508_10000816
513 Ga0307405_10004180
514 Ga0307405_10012735
515 Ga0307405_10084082
516 Ga0307410_10103333
517 Ga0307412_10002377
518 Ga0307411_10084269
519 Ga0316582_0001094
520 Ga0316584_0024111
521 Ga0466964_0039333
522 Ga0466971_0018159
523 Ga0466957_0003219
524 Ga0466960_0003119
525 Ga0466958_0008646
526 Ga0466967_0107198
527 Ga0495638_0010519
528 Ga0495638_0026806
529 Ga0495585_0001372
530 Ga0495583_0000279
531 Ga0495583_0022151
532 Ga0495610_0046137
533 Ga0495643_0002294
534 Ga0495643_0011736
535 Ga0495648_0000143
536 Ga0495663_0001578
537 Ga0495587_0011941
538 Ga0495668_0060469
539 Ga0495625_0000031
540 Ga0495625_0000088
541 Ga0495625_0047886
542 Ga0495649_0026398
543 Ga0495600_0000628
544 Ga0495683_0003663
545 Ga0495687_000455
546 Ga0495677_0002877
547 Ga0496100_0035666
548 Ga0496101_0011043
549 Ga0496102_0000122
550 Ga0496102_0000571
551 Ga0496102_0023106
552 Ga0496102_0160790
553 Ga0496103_0000056
554 Ga0496103_0000403
555 Ga0496103_0003479
556 Ga0496103_0045469
557 Ga0496104_0000105
558 Ga0496104_0021596
559 Ga0496105_0000057
560 Ga0496105_0002058
561 Ga0496105_0007929
562 Ga0496106_0060247
563 Ga0496107_0036026
564 Ga0496112_0057911
565 Ga0496112_0102309
566 Ga0496113_0000036
567 Ga0496113_0028616
568 Ga0496115_0000131
569 Ga0496116_0004492
570 Ga0496116_0010399
571 Ga0496116_0049794
572 Ga0496117_0001521
573 Ga0496117_0007439
574 Ga0496117_0015025
575 Ga0496117_0045911
576 Ga0496118_0001238
577 Ga0496118_0014624
578 Ga0496118_0104385
579 Ga0496119_0000079
580 Ga0496119_0003529
581 Ga0496120_0000506
582 Ga0496121_0000072
583 Ga0496121_0000114
584 Ga0496121_0000228
585 Ga0496121_0004513
586 Ga0496121_0005482
587 Ga0496122_0001515
588 Ga0496122_0005142
589 Ga0496123_0000627
590 Ga0496123_0004654
591 Ga0496123_0011705
592 Ga0496123_0012969
593 Ga0496123_0053584
594 Ga0496124_0000081
595 Ga0496124_0003460
596 Ga0496124_0007071
597 Ga0496124_0007123
598 Ga0496124_0077173
599 Ga0496124_0109361
600 Ga0496125_0001128
601 Ga0496125_0001706
602 Ga0496125_0002102
603 Ga0496125_0009750
604 Ga0496125_0026309
605 Ga0496126_0000103
606 Ga0496126_0001331
607 Ga0496126_0007283
608 Ga0496126_0019013
609 Ga0496126_0032545
610 Ga0496126_0044384
611 Ga0495682_0006697
612 Ga0501223_000007
613 Ga0501235_001246
614 Ga0501225_0000010
615 Ga0501245_000765
616 nmdc:mga0k408_7337_c1
617 Ga0500555_000121
618 Ga0500658_0003905
619 Ga0500658_0040135
620 Ga0500559_0012746
621 Ga0500573_0062793
622 Ga0500590_000416
623 Ga0500624_000132
624 Ga0500636_0002031
625 Ga0500625_000009
626 Ga0466962_0002512
627 2600228831
628 2738709094
629 2738847519
630 2738863248
631 2739295766
632 2739357444
633 2739649329
634 2740027802
635 2819714667
636 2879166847
637 2919142990
638 2928102136
639 2928529173
640 2928962422
641 2928968714
642 3000866713

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13432

TPR_16

Tetratricopeptide repeat

135

198

0.97

PF14559

TPR_19

Tetratricopeptide repeat

140

207

0.96

PF13181

TPR_8

Tetratricopeptide repeat

132

163

0.94

PF13181

TPR_8

Tetratricopeptide repeat

164

197

0.91

PF13469

Sulfotransfer_3

Sulfotransferase family

302

495

0.88

PF00685

Sulfotransfer_1

Sulfotransferase domain

300

530

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
1na3-assembly2.cif.gz_B design of stable alpha-helical arrays from an idealized tpr motif 0.928 102 179
2v5f-assembly1.cif.gz_A crystal structure of wild type peptide-binding domain of human type i collagen prolyl 4-hydroxylase. 0.923 101 179
1tjc-assembly1.cif.gz_B crystal structure of peptide-substrate-binding domain of human type i collagen prolyl 4-hydroxylase 0.9158 99 179
2avp-assembly1.cif.gz_A crystal structure of an 8 repeat consensus tpr superhelix 0.9139 103 167
1na3-assembly1.cif.gz_A design of stable alpha-helical arrays from an idealized tpr motif 0.9107 99 179
ID Description Score Start End Superfamily
af_Q58350_225_318_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9621 5 96 1.25.40.10
af_E7FG92_419_518_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9495 23 95 1.25.40.10
af_Q80ZX8_602_720_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.935 102 179 1.25.40.10
af_O94474_5_92_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9334 4 81 1.25.40.10
af_Q58350_225_318_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9328 5 96 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A2N2H9A5-F1-model_v4 CheR-type methyltransferase domain-containing protein 0.9333 7 95 GO:0008757
GO:0032259
AF-A0A2K5PKZ6-F1-model_v4 DnaJ heat shock protein family (Hsp40) member C7 0.8802 34 144 GO:0016020
AF-A0A6B2LPH5-F1-model_v4 Uncharacterized protein 0.8649 34 145 GO:0051879
AF-A0A4X1SSW2-F1-model_v4 Uncharacterized protein 0.8633 34 151
AF-A0A7V3Y1S5-F1-model_v4 Tetratricopeptide repeat protein 0.8617 34 165

Map