F405762

General Info

Members Datasets Scaffolds Average Seq Length
320 186 640 489

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221617|2644099114
Length 505
Sequence VKRLDDRSVTFADVPSLSAIARRHTDLSPGDIAWLQLLQADWQVIADLSFADLVLWLPDREGSGFWAGDQMRPTTGPTAYVDDVTGTFLPTGRRALVDSAYEHGRIAREGDPEWRDDVPVRVEAIPVRHEGRVIAVVSRNTNLLGVRTPSLLEINYLQAASDLANMIATGLFPSSGQRSDHADSPRVGDGFLRVDREGRVVYASPNGLSVFRKLGLTGDLTGHRLTDLTRELVPPKKRPDEETLSAVLGGRAHRDTELGASSGPGDGVSLIVRSIPLRPQGEHIGGIILLRDVTDLRRRDRELVTKDATIREIHHRVKNNLQTVAALLRLQARRIGSPEAASALEEAVRRVGSIAVVHDILSQAVEETVAFDDIADRLLRLVTDVGSTTAQVAVRREGSFGVLTSEVATPLAMVVMELMQNAAEHGYDGGATGEIVLQAARHGAILEVAVEDDGKGLPEGFDIEGATSLGLSIVRTLVESELGGHLTLGHAPDGGTRAGFTIPVE

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
31 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
52 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
77 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
78 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
83 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
88 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
89 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
90 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
91 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
92 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
93 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
94 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
95 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
96 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
97 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
98 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
99 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
102 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
103 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
104 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
105 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
106 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
107 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
108 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
109 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
113 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
114 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
130 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
131 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
134 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
137 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
138 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
139 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
142 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
146 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
147 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
148 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
149 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
150 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
151 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
152 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
155 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
156 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
157 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
158 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
159 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
160 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
161 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
162 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
163 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
164 2643221617 Nocardioides sp. Root79 Isolate Unclassified
165 2643221561 Nocardioides sp. Root151 Isolate Unclassified
166 2643221576 Nocardioides sp. Root614 Isolate Unclassified
167 2643221590 Nocardioides sp. Root682 Isolate Unclassified
168 2643221604 Nocardioides sp. Root190 Isolate Unclassified
169 2643221615 Nocardioides sp. Root224 Isolate Unclassified
170 2643221620 Nocardioides sp. Root240 Isolate Unclassified
171 2643221641 Nocardioides sp. Root122 Isolate Unclassified
172 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
173 2643221696 Nocardioides sp. Root140 Isolate Unclassified
174 2738541305 Nocardioides sp. CF167 Isolate Unclassified
175 2739367898 Nocardioides sp. CF479 Isolate Unclassified
176 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
177 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
178 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
179 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
180 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
181 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
182 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
183 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
184 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
185 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
186 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.19
Metatranscriptomes 0.62
Isolates 7.19

Biome Distribution

Category Percentage (%)
Aerial Root 0.62
Bulb 0
Endosphere 10.94
Nodule 0.31
Rhizoplane 7.81
Rhizosphere 73.75
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10007002 3300001979 Bacteria 4623
2 JGI24739J22299_10003798 3300001989 Bacteria 5768
3 Ga0006562J51391_1013091 3300003578 Bacteria 1630
4 Ga0070658_10052789 3300005327 Bacteria 3298
5 Ga0070683_100012876 3300005329 Bacteria 7280
6 Ga0070683_100019224 3300005329 Bacteria 6067
7 Ga0070683_100046201 3300005329 Bacteria 4022
8 Ga0070682_100019903 3300005337 Bacteria 3942
9 Ga0070660_100070268 3300005339 Bacteria 2732
10 Ga0070688_100045348 3300005365 Bacteria 2716
11 Ga0070659_100021120 3300005366 Bacteria 4953
12 Ga0070659_100031764 3300005366 Bacteria 4092
13 Ga0070700_100008727 3300005441 Bacteria 5531
14 Ga0070663_100050288 3300005455 Bacteria 2964
15 Ga0068867_100150854 3300005459 Bacteria 1825
16 Ga0070685_10047019 3300005466 Bacteria 2480
17 Ga0070698_100007249 3300005471 Bacteria 12011
18 Ga0070679_100004861 3300005530 Bacteria 12402
19 Ga0070684_100002700 3300005535 Bacteria 13104
20 Ga0070684_100029307 3300005535 Bacteria 4663
21 Ga0070684_100111908 3300005535 Bacteria 2449
22 Ga0070672_100002294 3300005543 Bacteria 12066
23 Ga0070665_100000877 3300005548 Bacteria 38753
24 Ga0070665_100186238 3300005548 Bacteria 2077
25 Ga0070664_100023661 3300005564 Bacteria 5075
26 Ga0068857_100029054 3300005577 Bacteria 4878
27 Ga0068856_100141802 3300005614 Bacteria 2411
28 Ga0070702_100032906 3300005615 Bacteria 2848
29 Ga0068852_100134324 3300005616 Bacteria 2283
30 Ga0068864_100011843 3300005618 Bacteria 7204
31 Ga0068861_100027423 3300005719 Bacteria 4147
32 Ga0068870_10001361 3300005840 Bacteria 9856
33 Ga0068860_100000301 3300005843 Bacteria 68703
34 Ga0081455_10058280 3300005937 Bacteria 3268
35 Ga0075365_10000189 3300006038 Bacteria 20092
36 Ga0075365_10003128 3300006038 Bacteria 8429
37 Ga0075365_10012339 3300006038 Bacteria 5070
38 Ga0075365_10037232 3300006038 Bacteria 3157
39 Ga0075365_10047666 3300006038 Bacteria 2817
40 Ga0075365_10062012 3300006038 Bacteria 2499
41 Ga0075365_10111737 3300006038 Bacteria 1878
42 Ga0075368_10001269 3300006042 Bacteria 8002
43 Ga0075363_100008539 3300006048 Bacteria 4776
44 Ga0075363_100026360 3300006048 Bacteria 2973
45 Ga0075364_10025824 3300006051 Bacteria 3742
46 Ga0075364_10039077 3300006051 Bacteria 3075
47 Ga0075367_10013873 3300006178 Bacteria 4347
48 Ga0075367_10043159 3300006178 Bacteria 2641
49 Ga0075428_100003412 3300006844 Bacteria 17377
50 Ga0075430_100000660 3300006846 Bacteria 26349
51 Ga0075431_100001548 3300006847 Bacteria 21323
52 Ga0075429_100028017 3300006880 Bacteria 4889
53 Ga0105245_10023720 3300009098 Bacteria 5385
54 Ga0114129_10000681 3300009147 Bacteria 42861
55 Ga0105243_10032073 3300009148 Bacteria 4056
56 Ga0105243_10050341 3300009148 Bacteria 3290
57 Ga0105248_10037057 3300009177 Bacteria 5453
58 Ga0105248_10037756 3300009177 Bacteria 5405
59 Ga0105237_10119389 3300009545 Bacteria 2631
60 Ga0105249_10061905 3300009553 Bacteria 3435
61 Ga0105249_10065621 3300009553 Bacteria 3340
62 Ga0105249_10102515 3300009553 Bacteria 2694
63 Ga0105249_10163774 3300009553 Bacteria 2151
64 Ga0105239_10006772 3300010375 Bacteria 13230
65 Ga0105239_10151292 3300010375 Bacteria 2590
66 Ga0105239_10152874 3300010375 Bacteria 2576
67 Ga0105246_10000332 3300011119 Bacteria 25139
68 Ga0163162_10053458 3300013306 Bacteria 4059
69 Ga0157372_10004720 3300013307 Bacteria 14476
70 Ga0157372_10074859 3300013307 Bacteria 3819
71 Ga0157375_10054927 3300013308 Bacteria 3925
72 Ga0157375_10223377 3300013308 Bacteria 2042
73 Ga0157375_10279821 3300013308 Bacteria 1831
74 Ga0163163_10008911 3300014325 Bacteria 8937
75 Ga0163163_10073230 3300014325 Bacteria 3416
76 Ga0157380_10001167 3300014326 Bacteria 17023
77 Ga0157377_10002462 3300014745 Bacteria 8193
78 Ga0157377_10011386 3300014745 Bacteria 4438
79 Ga0157377_10127860 3300014745 Bacteria 1548
80 Ga0157379_10002556 3300014968 Bacteria 15266
81 Ga0163161_10079196 3300017792 Bacteria 2416
82 Ga0206353_10370697 3300020082 Bacteria 8054
83 Ga0207647_10026336 3300025904 Bacteria 3806
84 Ga0207643_10000778 3300025908 Bacteria 19442
85 Ga0207705_10094546 3300025909 Bacteria 2192
86 Ga0207657_10020028 3300025919 Bacteria 6337
87 Ga0207652_10237663 3300025921 Bacteria 1642
88 Ga0207709_10017027 3300025935 Bacteria 4052
89 Ga0207691_10002791 3300025940 Bacteria 17029
90 Ga0207711_10062199 3300025941 Bacteria 3220
91 Ga0207661_10009601 3300025944 Bacteria 6947
92 Ga0207679_10012459 3300025945 Bacteria 5545
93 Ga0207640_10024640 3300025981 Bacteria 3633
94 Ga0207678_10051591 3300026067 Bacteria 3551
95 Ga0207708_10002155 3300026075 Bacteria 14535
96 Ga0207702_10068025 3300026078 Bacteria 3059
97 Ga0207648_10014468 3300026089 Bacteria 7289
98 Ga0207676_10028809 3300026095 Bacteria 4153
99 Ga0207674_10002647 3300026116 Bacteria 22374
100 Ga0207674_10018109 3300026116 Bacteria 7664
101 Ga0207674_10094654 3300026116 Bacteria 2973
102 Ga0207675_100052334 3300026118 Bacteria 3810
103 Ga0207675_100131567 3300026118 Bacteria 2373
104 Ga0207698_10018852 3300026142 Bacteria 4712
105 Ga0209813_10006053 3300027866 Bacteria 2970
106 Ga0268264_10000269 3300028381 Bacteria 91321
107 Ga0307512_10101438 3300030522 Bacteria 1947
108 Ga0307410_10072338 3300031852 Bacteria 2394
109 Ga0307407_10035536 3300031903 Bacteria 2738
110 Ga0307409_100032744 3300031995 Bacteria 3773
111 Ga0307409_100150573 3300031995 Bacteria 2019
112 Ga0307416_100024000 3300032002 Bacteria 4440
113 Ga0307414_10048499 3300032004 Bacteria 2930
114 Ga0307415_100001157 3300032126 Bacteria 12349
115 Ga0307415_100031664 3300032126 Bacteria 3410
116 Ga0307415_100045181 3300032126 Bacteria 2951
117 Ga0373947_0070720 3300035725 Bacteria 2139
118 Ga0395900_0013115 3300037418 Bacteria 8469
119 Ga0395900_0171833 3300037418 Bacteria 2206
120 Ga0395898_0156041 3300037466 Bacteria 2183
121 Ga0395901_0049116 3300038443 Bacteria 4383
122 Ga0439442_006729 3300042002 Bacteria 2309
123 Ga0439434_0021927 3300042435 Bacteria 1919
124 Ga0466969_0023344 3300044656 Bacteria 3188
125 Ga0466972_0013993 3300044658 Bacteria 4024
126 Ga0466972_0028380 3300044658 Bacteria 2761
127 Ga0466965_0001508 3300044683 Bacteria 9433
128 Ga0466965_0021323 3300044683 Bacteria 3118
129 Ga0466966_0014045 3300044684 Bacteria 5301
130 Ga0466961_0030568 3300044693 Bacteria 3461
131 Ga0466963_0029894 3300044694 Bacteria 3510
132 Ga0466963_0108337 3300044694 Bacteria 1905
133 Ga0466964_0005552 3300044706 Bacteria 4684
134 Ga0466971_0011205 3300044719 Bacteria 3928
135 Ga0466970_0002209 3300044765 Bacteria 9393
136 Ga0466970_0012184 3300044765 Bacteria 4391
137 Ga0466970_0014444 3300044765 Bacteria 4055
138 Ga0466970_0043087 3300044765 Bacteria 2401
139 Ga0466970_0061408 3300044765 Bacteria 2013
140 Ga0466957_0028525 3300044842 Bacteria 3324
141 Ga0466957_0052350 3300044842 Bacteria 2485
142 Ga0466957_0086663 3300044842 Bacteria 1957
143 Ga0466960_0000096 3300044901 Bacteria 28669
144 Ga0466960_0010905 3300044901 Bacteria 3784
145 Ga0466960_0036926 3300044901 Bacteria 2290
146 Ga0466967_0009147 3300045976 Bacteria 7329
147 Ga0466967_0012708 3300045976 Bacteria 6461
148 Ga0466967_0014095 3300045976 Bacteria 6210
149 Ga0466967_0040913 3300045976 Bacteria 3992
150 Ga0466967_0056059 3300045976 Bacteria 3473
151 Ga0466967_0105318 3300045976 Bacteria 2584
152 Ga0466967_0241020 3300045976 Bacteria 1725
153 Ga0495625_0115487 3300046660 Bacteria 1832
154 Ga0496101_0058402 3300048904 Bacteria 2793
155 Ga0496102_0009370 3300048905 Bacteria 8411
156 Ga0496102_0224251 3300048905 Bacteria 1772
157 Ga0496103_0004570 3300048906 Bacteria 8383
158 Ga0496104_0031802 3300048907 Bacteria 4909
159 Ga0496104_0113388 3300048907 Bacteria 2600
160 Ga0496105_0002771 3300048908 Bacteria 12807
161 Ga0496106_0023500 3300048909 Bacteria 4579
162 Ga0496108_0096749 3300048911 Bacteria 2515
163 Ga0496109_0008290 3300048912 Bacteria 8822
164 Ga0496109_0022947 3300048912 Bacteria 5532
165 Ga0496109_0056715 3300048912 Bacteria 3574
166 Ga0496109_0136800 3300048912 Bacteria 2289
167 Ga0496109_0178098 3300048912 Bacteria 1996
168 Ga0496110_0001726 3300048913 Bacteria 16096
169 Ga0496110_0091084 3300048913 Bacteria 2727
170 Ga0496110_0108722 3300048913 Bacteria 2490
171 Ga0496110_0167608 3300048913 Bacteria 1992
172 Ga0496112_0360544 3300048915 Bacteria 1396
173 Ga0496113_0120780 3300048916 Bacteria 2048
174 Ga0496114_0010413 3300048917 Bacteria 7396
175 Ga0496114_0011349 3300048917 Bacteria 7117
176 Ga0496114_0017249 3300048917 Bacteria 5825
177 Ga0496114_0042456 3300048917 Bacteria 3770
178 Ga0496114_0095438 3300048917 Bacteria 2531
179 Ga0501031_0022865 3300049568 Bacteria 4076
180 Ga0501031_0026853 3300049568 Bacteria 3753
181 Ga0501031_0075929 3300049568 Bacteria 2188
182 Ga0501032_0005042 3300049569 Bacteria 9871
183 Ga0501033_0002518 3300049570 Bacteria 15511
184 Ga0501034_0010542 3300049571 Bacteria 9622
185 Ga0501034_0232206 3300049571 Bacteria 1793
186 Ga0501036_0009708 3300049572 Bacteria 7922
187 Ga0501036_0013225 3300049572 Bacteria 6854
188 Ga0501036_0066585 3300049572 Bacteria 3048
189 Ga0501037_0005347 3300049573 Bacteria 9338
190 Ga0501037_0077143 3300049573 Bacteria 2418
191 Ga0501038_0001745 3300049574 Bacteria 20203
192 Ga0501038_0009867 3300049574 Bacteria 8739
193 Ga0501038_0086259 3300049574 Bacteria 2638
194 Ga0501038_0136816 3300049574 Bacteria 2006
195 Ga0501038_0244599 3300049574 Bacteria 1423
196 Ga0501039_0008743 3300049575 Bacteria 7713
197 Ga0501039_0018205 3300049575 Bacteria 5392
198 Ga0501039_0055270 3300049575 Bacteria 3074
199 Ga0501039_0100553 3300049575 Bacteria 2256
200 Ga0501040_0017889 3300049576 Bacteria 4705
201 Ga0501040_0060577 3300049576 Bacteria 2601
202 Ga0501040_0061495 3300049576 Bacteria 2583
203 Ga0501041_0006584 3300049577 Bacteria 6803
204 Ga0501041_0094639 3300049577 Bacteria 1845
205 Ga0501042_0009798 3300049578 Bacteria 6401
206 Ga0501042_0021150 3300049578 Bacteria 4531
207 Ga0501042_0074393 3300049578 Bacteria 2431
208 Ga0501042_0090075 3300049578 Bacteria 2201
209 Ga0501043_0007456 3300049579 Bacteria 8687
210 Ga0501046_0000602 3300049580 Bacteria 35284
211 Ga0501046_0003431 3300049580 Bacteria 14548
212 Ga0501046_0025725 3300049580 Bacteria 4814
213 Ga0501047_0007375 3300049581 Bacteria 10342
214 Ga0501047_0140494 3300049581 Bacteria 2293
215 Ga0501048_0010890 3300049582 Bacteria 6781
216 Ga0501048_0036621 3300049582 Bacteria 3526
217 Ga0501048_0072923 3300049582 Bacteria 2423
218 Ga0501067_0000678 3300049583 Bacteria 18332
219 Ga0501067_0002429 3300049583 Bacteria 10297
220 Ga0501067_0035989 3300049583 Bacteria 2749
221 Ga0501067_0072713 3300049583 Bacteria 1905
222 Ga0501068_0009091 3300049584 Bacteria 5546
223 Ga0501068_0039314 3300049584 Bacteria 2836
224 Ga0501069_0001570 3300049585 Bacteria 11291
225 Ga0501070_0001359 3300049586 Bacteria 21923
226 Ga0501070_0022331 3300049586 Bacteria 5300
227 Ga0501070_0109322 3300049586 Bacteria 2284
228 Ga0501071_0003549 3300049587 Bacteria 9763
229 Ga0501071_0004517 3300049587 Bacteria 8824
230 Ga0501071_0172231 3300049587 Bacteria 1620
231 Ga0501072_0004108 3300049588 Bacteria 11019
232 Ga0501072_0049604 3300049588 Bacteria 3305
233 Ga0501072_0148559 3300049588 Bacteria 1868
234 Ga0501073_0001258 3300049589 Bacteria 18570
235 Ga0501073_0017190 3300049589 Bacteria 5238
236 Ga0501074_0003132 3300049590 Bacteria 11665
237 Ga0501074_0013923 3300049590 Bacteria 5846
238 Ga0501074_0040426 3300049590 Bacteria 3378
239 Ga0501074_0071317 3300049590 Bacteria 2497
240 Ga0501076_0005709 3300049592 Bacteria 8974
241 Ga0501076_0088868 3300049592 Bacteria 2484
242 Ga0501077_0010149 3300049593 Bacteria 5865
243 Ga0501079_0015196 3300049741 Bacteria 5871
244 Ga0501079_0104589 3300049741 Bacteria 2196
245 Ga0501080_0004291 3300049742 Bacteria 12654
246 Ga0501080_0017701 3300049742 Bacteria 6593
247 Ga0501080_0025760 3300049742 Bacteria 5463
248 Ga0501080_0099873 3300049742 Bacteria 2693
249 Ga0501080_0111725 3300049742 Bacteria 2533
250 Ga0501080_0155275 3300049742 Bacteria 2114
251 Ga0501081_0071330 3300049743 Bacteria 2421
252 Ga0501083_0013713 3300049744 Bacteria 5669
253 Ga0501035_0011176 3300049822 Bacteria 8314
254 Ga0501035_0096964 3300049822 Bacteria 2590
255 Ga0501035_0108448 3300049822 Bacteria 2434
256 Ga0501035_0209257 3300049822 Bacteria 1669
257 Ga0501044_0022323 3300049823 Bacteria 6745
258 Ga0501045_0024848 3300049824 Bacteria 4303
259 Ga0501045_0065339 3300049824 Bacteria 2671
260 Ga0501045_0124865 3300049824 Bacteria 1912
261 nmdc:mga03683_17219_c1 3300050489 Bacteria 2731
262 nmdc:mga03n38_1039_c1 3300050490 Bacteria 7643
263 nmdc:mga03n38_10645_c1 3300050490 Bacteria 3393
264 nmdc:mga03n38_12866_c1 3300050490 Bacteria 3163
265 nmdc:mga03n38_51326_c1 3300050490 Bacteria 1841
266 nmdc:mga03n38_5996_c1 3300050490 Bacteria 4189
267 nmdc:mga03n38_8367_c1 3300050490 Bacteria 3711
268 nmdc:mga00v17_22258_c1 3300050491 Bacteria 3655
269 nmdc:mga00v17_4924_c1 3300050491 Bacteria 7001
270 nmdc:mga00v17_66219_c1 3300050491 Bacteria 2230
271 nmdc:mga0yw44_31226_c1 3300050492 Bacteria 3096
272 nmdc:mga0yw44_7321_c1 3300050492 Bacteria 5419
273 nmdc:mga0yw44_763_c1 3300050492 Bacteria 11926
274 nmdc:mga06z11_20451_c1 3300050494 Bacteria 3059
275 nmdc:mga04h51_8506_c1 3300050495 Bacteria 2748
276 nmdc:mga07m45_38435_c1 3300050496 Bacteria 2671
277 nmdc:mga07m45_8247_c1 3300050496 Bacteria 5346
278 nmdc:mga05p37_6939_c1 3300050507 Bacteria 13344
279 nmdc:mga09592_16713_c1 3300050508 Bacteria 6006
280 nmdc:mga0qj67_8946_c1 3300050509 Bacteria 7428
281 nmdc:mga06r32_12684_c1 3300050510 Bacteria 7616
282 nmdc:mga08y16_175398_c1 3300050511 Bacteria 2226
283 Ga0500644_0000329 3300053088 Bacteria 24275
284 Ga0500556_0000643 3300053104 Bacteria 21878
285 Ga0500593_000407 3300053117 Bacteria 17091
286 Ga0501084_0011221 3300054114 Bacteria 7418
287 Ga0501084_0013225 3300054114 Bacteria 6829
288 Ga0501084_0049582 3300054114 Bacteria 3515
289 Ga0501084_0180192 3300054114 Bacteria 1783
290 Ga0501082_0109460 3300060353 Bacteria 2391
291 Ga0501082_0125978 3300060353 Bacteria 2221
292 Ga0501082_0133559 3300060353 Bacteria 2153
293 Ga0530510_0018868 3300061734 Bacteria 4891
294 Ga0530510_0024043 3300061734 Bacteria 4346
295 Ga0530510_0025658 3300061734 Bacteria 4215
296 Ga0530510_0055764 3300061734 Bacteria 2855
297 Ga0530510_0076429 3300061734 Bacteria 2433
298 2644099114 2643221617 Bacteria 5139111
299 2643828284 2643221561 Bacteria 4984412
300 2643889206 2643221576 Bacteria 5214352
301 2643958261 2643221590 Bacteria 5214697
302 2644036449 2643221604 Bacteria 5014917
303 2644090692 2643221615 Bacteria 5487866
304 2644114995 2643221620 Bacteria 5134593
305 2644230753 2643221641 Bacteria 4490190
306 2644320496 2643221657 Bacteria 5490246
307 2644535099 2643221696 Bacteria 5431823
308 2738867837 2738541305 Bacteria 4910150
309 2740167611 2739367898 Bacteria 4367674
310 2774396791 2773857762 Bacteria 5971770
311 2809198430 2808606439 Bacteria 5952208
312 2812332160 2811994874 Bacteria 5367947
313 2812349634 2811994878 Bacteria 5992952
314 2816426977 2816332119 Bacteria 8120218
315 2855390698 2855386786 Bacteria 4752232
316 2857482280 2857481737 Bacteria 4761446
317 2891969492 2891968417 Bacteria 5821697
318 2984576887 2984576629 Bacteria 4248407
319 2990258635 2990256926 Bacteria 4252839
320 8054613185 8054609563 Bacteria 5170090
321 JGI24740J21852_10007002
322 JGI24739J22299_10003798
323 Ga0006562J51391_1013091
324 Ga0070658_10052789
325 Ga0070683_100012876
326 Ga0070683_100019224
327 Ga0070683_100046201
328 Ga0070682_100019903
329 Ga0070660_100070268
330 Ga0070688_100045348
331 Ga0070659_100021120
332 Ga0070659_100031764
333 Ga0070700_100008727
334 Ga0070663_100050288
335 Ga0068867_100150854
336 Ga0070685_10047019
337 Ga0070698_100007249
338 Ga0070679_100004861
339 Ga0070684_100002700
340 Ga0070684_100029307
341 Ga0070684_100111908
342 Ga0070672_100002294
343 Ga0070665_100000877
344 Ga0070665_100186238
345 Ga0070664_100023661
346 Ga0068857_100029054
347 Ga0068856_100141802
348 Ga0070702_100032906
349 Ga0068852_100134324
350 Ga0068864_100011843
351 Ga0068861_100027423
352 Ga0068870_10001361
353 Ga0068860_100000301
354 Ga0081455_10058280
355 Ga0075365_10000189
356 Ga0075365_10003128
357 Ga0075365_10012339
358 Ga0075365_10037232
359 Ga0075365_10047666
360 Ga0075365_10062012
361 Ga0075365_10111737
362 Ga0075368_10001269
363 Ga0075363_100008539
364 Ga0075363_100026360
365 Ga0075364_10025824
366 Ga0075364_10039077
367 Ga0075367_10013873
368 Ga0075367_10043159
369 Ga0075428_100003412
370 Ga0075430_100000660
371 Ga0075431_100001548
372 Ga0075429_100028017
373 Ga0105245_10023720
374 Ga0114129_10000681
375 Ga0105243_10032073
376 Ga0105243_10050341
377 Ga0105248_10037057
378 Ga0105248_10037756
379 Ga0105237_10119389
380 Ga0105249_10061905
381 Ga0105249_10065621
382 Ga0105249_10102515
383 Ga0105249_10163774
384 Ga0105239_10006772
385 Ga0105239_10151292
386 Ga0105239_10152874
387 Ga0105246_10000332
388 Ga0163162_10053458
389 Ga0157372_10004720
390 Ga0157372_10074859
391 Ga0157375_10054927
392 Ga0157375_10223377
393 Ga0157375_10279821
394 Ga0163163_10008911
395 Ga0163163_10073230
396 Ga0157380_10001167
397 Ga0157377_10002462
398 Ga0157377_10011386
399 Ga0157377_10127860
400 Ga0157379_10002556
401 Ga0163161_10079196
402 Ga0206353_10370697
403 Ga0207647_10026336
404 Ga0207643_10000778
405 Ga0207705_10094546
406 Ga0207657_10020028
407 Ga0207652_10237663
408 Ga0207709_10017027
409 Ga0207691_10002791
410 Ga0207711_10062199
411 Ga0207661_10009601
412 Ga0207679_10012459
413 Ga0207640_10024640
414 Ga0207678_10051591
415 Ga0207708_10002155
416 Ga0207702_10068025
417 Ga0207648_10014468
418 Ga0207676_10028809
419 Ga0207674_10002647
420 Ga0207674_10018109
421 Ga0207674_10094654
422 Ga0207675_100052334
423 Ga0207675_100131567
424 Ga0207698_10018852
425 Ga0209813_10006053
426 Ga0268264_10000269
427 Ga0307512_10101438
428 Ga0307410_10072338
429 Ga0307407_10035536
430 Ga0307409_100032744
431 Ga0307409_100150573
432 Ga0307416_100024000
433 Ga0307414_10048499
434 Ga0307415_100001157
435 Ga0307415_100031664
436 Ga0307415_100045181
437 Ga0373947_0070720
438 Ga0395900_0013115
439 Ga0395900_0171833
440 Ga0395898_0156041
441 Ga0395901_0049116
442 Ga0439442_006729
443 Ga0439434_0021927
444 Ga0466969_0023344
445 Ga0466972_0013993
446 Ga0466972_0028380
447 Ga0466965_0001508
448 Ga0466965_0021323
449 Ga0466966_0014045
450 Ga0466961_0030568
451 Ga0466963_0029894
452 Ga0466963_0108337
453 Ga0466964_0005552
454 Ga0466971_0011205
455 Ga0466970_0002209
456 Ga0466970_0012184
457 Ga0466970_0014444
458 Ga0466970_0043087
459 Ga0466970_0061408
460 Ga0466957_0028525
461 Ga0466957_0052350
462 Ga0466957_0086663
463 Ga0466960_0000096
464 Ga0466960_0010905
465 Ga0466960_0036926
466 Ga0466967_0009147
467 Ga0466967_0012708
468 Ga0466967_0014095
469 Ga0466967_0040913
470 Ga0466967_0056059
471 Ga0466967_0105318
472 Ga0466967_0241020
473 Ga0495625_0115487
474 Ga0496101_0058402
475 Ga0496102_0009370
476 Ga0496102_0224251
477 Ga0496103_0004570
478 Ga0496104_0031802
479 Ga0496104_0113388
480 Ga0496105_0002771
481 Ga0496106_0023500
482 Ga0496108_0096749
483 Ga0496109_0008290
484 Ga0496109_0022947
485 Ga0496109_0056715
486 Ga0496109_0136800
487 Ga0496109_0178098
488 Ga0496110_0001726
489 Ga0496110_0091084
490 Ga0496110_0108722
491 Ga0496110_0167608
492 Ga0496112_0360544
493 Ga0496113_0120780
494 Ga0496114_0010413
495 Ga0496114_0011349
496 Ga0496114_0017249
497 Ga0496114_0042456
498 Ga0496114_0095438
499 Ga0501031_0022865
500 Ga0501031_0026853
501 Ga0501031_0075929
502 Ga0501032_0005042
503 Ga0501033_0002518
504 Ga0501034_0010542
505 Ga0501034_0232206
506 Ga0501036_0009708
507 Ga0501036_0013225
508 Ga0501036_0066585
509 Ga0501037_0005347
510 Ga0501037_0077143
511 Ga0501038_0001745
512 Ga0501038_0009867
513 Ga0501038_0086259
514 Ga0501038_0136816
515 Ga0501038_0244599
516 Ga0501039_0008743
517 Ga0501039_0018205
518 Ga0501039_0055270
519 Ga0501039_0100553
520 Ga0501040_0017889
521 Ga0501040_0060577
522 Ga0501040_0061495
523 Ga0501041_0006584
524 Ga0501041_0094639
525 Ga0501042_0009798
526 Ga0501042_0021150
527 Ga0501042_0074393
528 Ga0501042_0090075
529 Ga0501043_0007456
530 Ga0501046_0000602
531 Ga0501046_0003431
532 Ga0501046_0025725
533 Ga0501047_0007375
534 Ga0501047_0140494
535 Ga0501048_0010890
536 Ga0501048_0036621
537 Ga0501048_0072923
538 Ga0501067_0000678
539 Ga0501067_0002429
540 Ga0501067_0035989
541 Ga0501067_0072713
542 Ga0501068_0009091
543 Ga0501068_0039314
544 Ga0501069_0001570
545 Ga0501070_0001359
546 Ga0501070_0022331
547 Ga0501070_0109322
548 Ga0501071_0003549
549 Ga0501071_0004517
550 Ga0501071_0172231
551 Ga0501072_0004108
552 Ga0501072_0049604
553 Ga0501072_0148559
554 Ga0501073_0001258
555 Ga0501073_0017190
556 Ga0501074_0003132
557 Ga0501074_0013923
558 Ga0501074_0040426
559 Ga0501074_0071317
560 Ga0501076_0005709
561 Ga0501076_0088868
562 Ga0501077_0010149
563 Ga0501079_0015196
564 Ga0501079_0104589
565 Ga0501080_0004291
566 Ga0501080_0017701
567 Ga0501080_0025760
568 Ga0501080_0099873
569 Ga0501080_0111725
570 Ga0501080_0155275
571 Ga0501081_0071330
572 Ga0501083_0013713
573 Ga0501035_0011176
574 Ga0501035_0096964
575 Ga0501035_0108448
576 Ga0501035_0209257
577 Ga0501044_0022323
578 Ga0501045_0024848
579 Ga0501045_0065339
580 Ga0501045_0124865
581 nmdc:mga03683_17219_c1
582 nmdc:mga03n38_1039_c1
583 nmdc:mga03n38_10645_c1
584 nmdc:mga03n38_12866_c1
585 nmdc:mga03n38_51326_c1
586 nmdc:mga03n38_5996_c1
587 nmdc:mga03n38_8367_c1
588 nmdc:mga00v17_22258_c1
589 nmdc:mga00v17_4924_c1
590 nmdc:mga00v17_66219_c1
591 nmdc:mga0yw44_31226_c1
592 nmdc:mga0yw44_7321_c1
593 nmdc:mga0yw44_763_c1
594 nmdc:mga06z11_20451_c1
595 nmdc:mga04h51_8506_c1
596 nmdc:mga07m45_38435_c1
597 nmdc:mga07m45_8247_c1
598 nmdc:mga05p37_6939_c1
599 nmdc:mga09592_16713_c1
600 nmdc:mga0qj67_8946_c1
601 nmdc:mga06r32_12684_c1
602 nmdc:mga08y16_175398_c1
603 Ga0500644_0000329
604 Ga0500556_0000643
605 Ga0500593_000407
606 Ga0501084_0011221
607 Ga0501084_0013225
608 Ga0501084_0049582
609 Ga0501084_0180192
610 Ga0501082_0109460
611 Ga0501082_0125978
612 Ga0501082_0133559
613 Ga0530510_0018868
614 Ga0530510_0024043
615 Ga0530510_0025658
616 Ga0530510_0055764
617 Ga0530510_0076429
618 2644099114
619 2643828284
620 2643889206
621 2643958261
622 2644036449
623 2644090692
624 2644114995
625 2644230753
626 2644320496
627 2644535099
628 2738867837
629 2740167611
630 2774396791
631 2809198430
632 2812332160
633 2812349634
634 2816426977
635 2855390698
636 2857482280
637 2891969492
638 2984576887
639 2990258635
640 8054613185

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12282

PdtaS_GAF

Histidine kinase PdtaS, GAF domain

17

160

0.98

PF07568

HisKA_2

Histidine kinase

312

385

0.96

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

406

505

0.88

PF07536

HWE_HK

HWE histidine kinase

312

395

0.85

PF08448

PAS_4

PAS fold

185

298

0.85

PF13581

HATPase_c_2

Histidine kinase-like ATPase domain

382

481

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ykf-assembly1.cif.gz_A-2 sensor region of a sensor histidine kinase 0.9154 1 277
2ykh-assembly2.cif.gz_B sensor region of a sensor histidine kinase 0.9115 2 277
2ykf-assembly1.cif.gz_A-2 sensor region of a sensor histidine kinase 0.9088 1 277
2ykh-assembly2.cif.gz_B sensor region of a sensor histidine kinase 0.9049 2 277
3cgy-assembly3.cif.gz_C crystal structure of salmonella sensor kinase phoq catalytic domain in complex with radicicol 0.8475 347 492
ID Description Score Start End Superfamily
af_P9WGL5_356_497_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.938 349 492 3.30.565.10
2ykhB01 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;GAF domain 0.937 2 133 3.30.450.280
2ykhB01 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;GAF domain 0.9291 2 133 3.30.450.280
4fltA04 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;B family DNA polymerase, finger domain 0.9206 298 340 1.10.287.690
af_P9WGL5_356_497_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9128 349 492 3.30.565.10
ID Description Score Start End GO Terms
AF-A0A6I3E936-F1-model_v4 Histidine kinase 0.9775 4 120 GO:0016301
AF-A0A6L5ZUI9-F1-model_v4 Histidine kinase 0.9685 1 209 GO:0016301
AF-A0A383B380-F1-model_v4 Histidine kinase PdtaS GAF domain-containing protein 0.9446 1 214
AF-A0A7K0N1Q8-F1-model_v4 ATPase 0.939 349 490
AF-A0A2W6FPF7-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9387 298 491 GO:0016772

Map