F405338

General Info

Members Datasets Scaffolds Average Seq Length
319 252 638 303

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2920879853|2920882955
Length 327
Sequence PAPAQPGSAAPSPSGAAAPVAADPTDTGPARPGASRRRIAPGKVLAWAFLIAVVLVTLFPFYWMLRTALSTNPGLQADPSSWLPPEFTFGAFERVLGMQSTEEALAEGGSGTSLNFWRYLLNSVVVATLITAGQLLFSAMAAYAFSRLKWPGRDKVFGLFLAGLMVPAIFTLLPNFVLIKELGLVDSMLGIALPTMFMTPFAVFFLRQFFMNVPAEIEEAALLDGVSKVGVFFRVVLPMSAAPMATLGILTYMTAWNDYFWPLMVSYTDASRVLTVALGVFRAQSPQTGTDWAGLMAATLIAALPMILLFAVFAKRVVNSIGFSGIK

Samples

Sample ID Description Type Environment
1 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
29 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
32 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
41 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
45 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
46 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
47 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
48 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
49 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
72 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
73 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
74 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
75 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
76 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
77 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
78 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
79 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
80 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
81 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
85 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
86 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
87 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
88 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
89 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
90 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
91 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
92 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
93 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
94 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
95 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
96 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
100 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
101 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
102 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
103 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
104 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
105 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
106 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
107 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
108 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
109 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
110 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
111 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
112 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
113 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
114 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
115 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
116 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
117 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
118 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
119 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
120 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
121 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
122 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
123 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
124 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
125 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
126 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
127 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
128 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
129 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
130 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
131 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
132 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
133 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
134 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
135 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
136 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
137 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
138 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
139 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
140 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
141 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
142 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
143 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
144 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
145 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
146 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
147 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
148 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
149 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
150 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
151 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
152 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
153 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
154 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
155 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
156 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
157 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
158 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
159 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
160 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
161 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
162 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
163 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
164 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
165 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
166 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
167 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
168 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
169 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
170 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
171 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
172 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
173 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
174 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
181 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
183 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
184 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
185 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
186 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
187 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
188 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
189 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
190 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
191 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
192 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
193 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
194 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
195 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
196 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
197 2920879853 Kocuria salina CV6 Isolate Unclassified
198 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
199 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
200 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
201 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
202 2643221647 Streptomyces sp. Root369 Isolate Unclassified
203 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
204 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
205 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
206 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
207 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
208 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
209 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
210 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
211 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
212 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
213 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
214 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
215 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
216 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
217 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
218 2862574272 Streptomyces sp. AcE210 Isolate Nodule
219 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
220 2867428634 Streptomyces sp. RP5T Isolate Unclassified
221 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
222 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
223 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
224 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
225 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
226 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
227 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
228 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
229 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
230 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
231 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
232 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
233 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
234 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
235 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
236 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
237 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
238 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
239 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
240 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
241 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
242 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
243 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
244 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
245 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
246 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
247 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
248 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
249 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
250 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
251 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
252 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.45
Metatranscriptomes 0
Isolates 17.55

Biome Distribution

Category Percentage (%)
Aerial Root 0.31
Bulb 0
Endosphere 5.33
Nodule 0.94
Rhizoplane 0.94
Rhizosphere 71.16
Stem 0
Stem Tuber 0
Unclassified 0.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10010766 3300001990 Bacteria 3007
2 JGI24735J21928_10045390 3300002067 Bacteria 1276
3 rootH2_10081294 3300003320 Bacteria 3303
4 rootH1_10143860 3300003323 Bacteria 3355
5 Ga0070683_100019665 3300005329 Bacteria 6001
6 Ga0070683_100285865 3300005329 Unclassified 1569
7 Ga0070670_100171616 3300005331 Bacteria 1881
8 Ga0068869_100004909 3300005334 Bacteria 8368
9 Ga0068868_100006246 3300005338 Bacteria 8427
10 Ga0070689_100408452 3300005340 Bacteria 1149
11 Ga0070661_100032655 3300005344 Bacteria 3768
12 Ga0070668_100000134 3300005347 Bacteria 46324
13 Ga0070675_100004820 3300005354 Bacteria 10294
14 Ga0070659_100005609 3300005366 Bacteria 9022
15 Ga0070667_100094830 3300005367 Bacteria 2572
16 Ga0070663_100038488 3300005455 Bacteria 3337
17 Ga0070662_100377658 3300005457 Bacteria 1166
18 Ga0068867_100187589 3300005459 Bacteria 1648
19 Ga0070672_100190053 3300005543 Bacteria 1714
20 Ga0070693_100222559 3300005547 Bacteria 1237
21 Ga0068855_100757314 3300005563 Bacteria 1035
22 Ga0070664_100005868 3300005564 Bacteria 9909
23 Ga0068852_100246116 3300005616 Bacteria 1711
24 Ga0068852_100468347 3300005616 Bacteria 1250
25 Ga0068864_100452731 3300005618 Bacteria 1228
26 Ga0068858_100019881 3300005842 Bacteria 6278
27 Ga0068860_100061495 3300005843 Bacteria 3568
28 Ga0081540_1013236 3300005983 Bacteria 5375
29 Ga0081539_10006742 3300005985 Bacteria 10788
30 Ga0081539_10013786 3300005985 Bacteria 6056
31 Ga0081539_10099925 3300005985 Bacteria 1481
32 Ga0075365_10158619 3300006038 Bacteria 1576
33 Ga0075363_100001215 3300006048 Bacteria 9520
34 Ga0070712_100061195 3300006175 Bacteria 2659
35 Ga0075367_10006608 3300006178 Bacteria 5876
36 Ga0075370_10019817 3300006353 Bacteria 3666
37 Ga0068871_100433850 3300006358 Bacteria 1175
38 Ga0075430_100119204 3300006846 Bacteria 2200
39 Ga0099795_10000012 3300007788 Bacteria 71748
40 Ga0111539_10000786 3300009094 Bacteria 41312
41 Ga0105245_10000580 3300009098 Bacteria 33235
42 Ga0114129_10338514 3300009147 Bacteria 1996
43 Ga0105248_10229156 3300009177 Bacteria 2091
44 Ga0099796_10000209 3300010159 Bacteria 9083
45 Ga0105246_10261667 3300011119 Bacteria 1379
46 Ga0157369_10107939 3300013105 Bacteria 2961
47 Ga0157372_10101791 3300013307 Bacteria 3280
48 Ga0157377_10015870 3300014745 Bacteria 3861
49 Ga0183367_1004 3300015688 Bacteria 716880
50 Ga0213876_10022331 3300021384 Bacteria 3346
51 Ga0213875_10013095 3300021388 Bacteria 4080
52 Ga0207426_1009202 3300025302 Bacteria 3927
53 Ga0207710_10093814 3300025900 Bacteria 1408
54 Ga0207688_10082356 3300025901 Bacteria 1839
55 Ga0207647_10008941 3300025904 Bacteria 7142
56 Ga0207649_10029774 3300025920 Bacteria 3227
57 Ga0207652_10173231 3300025921 Bacteria 1937
58 Ga0207659_10004980 3300025926 Bacteria 8048
59 Ga0207687_10016620 3300025927 Bacteria 4834
60 Ga0207700_10128003 3300025928 Bacteria 2069
61 Ga0207706_10011993 3300025933 Bacteria 7896
62 Ga0207689_10004747 3300025942 Bacteria 12255
63 Ga0207679_10064001 3300025945 Bacteria 2747
64 Ga0207668_10000407 3300025972 Bacteria 27069
65 Ga0207668_10068633 3300025972 Bacteria 2521
66 Ga0207677_10007315 3300026023 Bacteria 6097
67 Ga0207678_10033762 3300026067 Bacteria 4456
68 Ga0207678_10150811 3300026067 Bacteria 1985
69 Ga0207641_10006816 3300026088 Bacteria 9568
70 Ga0207676_10454734 3300026095 Bacteria 1208
71 Ga0207674_10004749 3300026116 Bacteria 16287
72 Ga0207674_10012469 3300026116 Bacteria 9499
73 Ga0207675_100072496 3300026118 Bacteria 3221
74 Ga0207683_10065347 3300026121 Bacteria 3207
75 Ga0207683_10166751 3300026121 Bacteria 1993
76 Ga0207698_10037096 3300026142 Bacteria 3586
77 Ga0207698_10135055 3300026142 Bacteria 2115
78 Ga0209179_1000002 3300027512 Bacteria 124932
79 Ga0268264_10037643 3300028381 Bacteria 3989
80 Ga0268264_10271424 3300028381 Bacteria 1585
81 Ga0307517_10057280 3300028786 Bacteria 3779
82 Ga0307515_10000275 3300028794 Bacteria 125944
83 Ga0307515_10006168 3300028794 Bacteria 24095
84 Ga0307515_10020927 3300028794 Bacteria 11627
85 Ga0307515_10038082 3300028794 Bacteria 7707
86 Ga0307515_10051226 3300028794 Bacteria 6163
87 Ga0307515_10113617 3300028794 Bacteria 3138
88 Ga0307511_10000186 3300030521 Bacteria 61499
89 Ga0307512_10003332 3300030522 Bacteria 18846
90 Ga0307512_10013932 3300030522 Bacteria 7510
91 Ga0307512_10032255 3300030522 Bacteria 4526
92 Ga0307512_10071321 3300030522 Bacteria 2579
93 Ga0307513_10002464 3300031456 Bacteria 25618
94 Ga0307513_10075480 3300031456 Bacteria 3500
95 Ga0307513_10076045 3300031456 Bacteria 3484
96 Ga0307513_10144576 3300031456 Bacteria 2298
97 Ga0307509_10030965 3300031507 Bacteria 5912
98 Ga0307509_10097561 3300031507 Bacteria 2987
99 Ga0307508_10033398 3300031616 Bacteria 4644
100 Ga0307508_10062624 3300031616 Bacteria 3282
101 Ga0307514_10001314 3300031649 Bacteria 31830
102 Ga0307514_10043334 3300031649 Bacteria 3533
103 Ga0307516_10003453 3300031730 Bacteria 20261
104 Ga0307516_10005214 3300031730 Bacteria 15649
105 Ga0307516_10011052 3300031730 Bacteria 9862
106 Ga0307516_10041275 3300031730 Bacteria 4587
107 Ga0307516_10055889 3300031730 Bacteria 3851
108 Ga0307516_10111669 3300031730 Bacteria 2535
109 Ga0307516_10124807 3300031730 Bacteria 2360
110 Ga0307405_10038828 3300031731 Bacteria 2873
111 Ga0307518_10070875 3300031838 Bacteria 2525
112 Ga0307518_10082974 3300031838 Bacteria 2312
113 Ga0307410_10060385 3300031852 Bacteria 2591
114 Ga0307406_10061915 3300031901 Bacteria 2419
115 Ga0307407_10035201 3300031903 Bacteria 2749
116 Ga0307409_100005015 3300031995 Bacteria 7542
117 Ga0307416_100015475 3300032002 Bacteria 5273
118 Ga0307416_100041681 3300032002 Bacteria 3578
119 Ga0307416_100110243 3300032002 Bacteria 2423
120 Ga0307411_10195861 3300032005 Bacteria 1547
121 Ga0307507_10024876 3300033179 Bacteria 6509
122 Ga0307507_10063622 3300033179 Bacteria 3413
123 Ga0307507_10067492 3300033179 Bacteria 3270
124 Ga0307510_10177959 3300033180 Bacteria 1695
125 Ga0307510_10241065 3300033180 Bacteria 1302
126 Ga0373950_0006257 3300034818 Bacteria 1809
127 Ga0373928_0022898 3300035084 Bacteria 1328
128 Ga0373940_0058664 3300035088 Bacteria 1096
129 Ga0373951_0006113 3300035091 Bacteria 2764
130 Ga0373941_0018157 3300035115 Bacteria 1940
131 Ga0373962_0002502 3300035242 Bacteria 4368
132 Ga0373947_0018119 3300035725 Bacteria 4052
133 Ga0373937_0057730 3300036401 Bacteria 3566
134 Ga0395898_0021863 3300037466 Bacteria 6480
135 Ga0436364_0331557 3300037853 Bacteria 17701
136 Ga0436365_0098699 3300039437 Bacteria 4500
137 Ga0439436_0001028 3300041404 Bacteria 7816
138 Ga0439436_0003174 3300041404 Bacteria 4985
139 Ga0439433_0011615 3300041999 Bacteria 1930
140 Ga0439449_0003629 3300042007 Bacteria 5990
141 Ga0439449_0004350 3300042007 Bacteria 5467
142 Ga0439455_0002646 3300042012 Bacteria 3294
143 Ga0439457_001926 3300042014 Bacteria 6111
144 Ga0450903_000518 3300042138 Bacteria 8092
145 Ga0439458_0000670 3300042157 Bacteria 8816
146 Ga0466969_0000346 3300044656 Bacteria 25512
147 Ga0466972_0004193 3300044658 Bacteria 7200
148 Ga0466965_0004482 3300044683 Bacteria 6215
149 Ga0466965_0050496 3300044683 Bacteria 2062
150 Ga0466966_0005080 3300044684 Bacteria 8645
151 Ga0466961_0002558 3300044693 Bacteria 11268
152 Ga0466961_0012315 3300044693 Bacteria 5468
153 Ga0466963_0000184 3300044694 Bacteria 26087
154 Ga0466963_0043216 3300044694 Bacteria 2961
155 Ga0466963_0285730 3300044694 Bacteria 1160
156 Ga0466964_0015229 3300044706 Bacteria 2927
157 Ga0466971_0001168 3300044719 Bacteria 10914
158 Ga0466971_0119457 3300044719 Bacteria 1219
159 Ga0466970_0007780 3300044765 Bacteria 5375
160 Ga0466970_0018428 3300044765 Bacteria 3613
161 Ga0466970_0027720 3300044765 Bacteria 2973
162 Ga0466957_0000619 3300044842 Bacteria 17948
163 Ga0466959_0000133 3300045049 Bacteria 48464
164 Ga0466959_0000388 3300045049 Bacteria 25883
165 Ga0466959_0162279 3300045049 Bacteria 1571
166 Ga0451576_0038391 3300045051 Bacteria 5068
167 Ga0466958_0000617 3300045836 Bacteria 15232
168 Ga0466958_0071609 3300045836 Bacteria 2122
169 Ga0466958_0091682 3300045836 Bacteria 1881
170 Ga0495617_013731 3300046452 Bacteria 2754
171 Ga0495603_0002730 3300046455 Bacteria 10404
172 Ga0495629_0098926 3300046459 Bacteria 2035
173 Ga0495629_0239825 3300046459 Bacteria 1248
174 Ga0495638_0020896 3300046460 Bacteria 4322
175 Ga0495638_0131312 3300046460 Bacteria 1471
176 Ga0495651_0008197 3300046462 Bacteria 8012
177 Ga0495651_0024986 3300046462 Bacteria 4648
178 Ga0495662_0032834 3300046476 Bacteria 2507
179 Ga0495664_0002996 3300046477 Bacteria 9130
180 Ga0495585_0020507 3300046492 Bacteria 3801
181 Ga0495585_0040257 3300046492 Bacteria 2624
182 Ga0495594_0009359 3300046499 Bacteria 5060
183 Ga0495594_0017065 3300046499 Bacteria 3832
184 Ga0495594_0047674 3300046499 Bacteria 2353
185 Ga0495607_0066262 3300046501 Bacteria 2033
186 Ga0495583_0041572 3300046506 Bacteria 2152
187 Ga0495616_0132198 3300046513 Bacteria 1143
188 Ga0495618_0033655 3300046514 Bacteria 3214
189 Ga0495630_0039416 3300046517 Bacteria 3532
190 Ga0495652_0017051 3300046529 Bacteria 6488
191 Ga0495586_0046885 3300046535 Bacteria 2331
192 Ga0495587_0003680 3300046536 Bacteria 10202
193 Ga0495609_0105973 3300046538 Bacteria 1216
194 Ga0495622_0018381 3300046557 Bacteria 3254
195 Ga0495667_0198108 3300046559 Bacteria 1286
196 Ga0495668_0144956 3300046616 Bacteria 1300
197 Ga0495634_0005613 3300046642 Bacteria 9619
198 Ga0495611_0024347 3300046648 Bacteria 2633
199 Ga0495625_0004049 3300046660 Bacteria 14010
200 Ga0495625_0121099 3300046660 Bacteria 1780
201 Ga0495635_0000753 3300046663 Bacteria 21015
202 Ga0495588_0003021 3300046674 Bacteria 7280
203 Ga0495657_0024867 3300046675 Bacteria 4257
204 Ga0495646_0001593 3300046680 Bacteria 13516
205 Ga0495613_0001960 3300046689 Bacteria 15620
206 Ga0495589_0025595 3300046794 Bacteria 2994
207 Ga0495589_0065253 3300046794 Bacteria 1785
208 Ga0495600_0026558 3300046809 Bacteria 3737
209 Ga0495660_0048083 3300046810 Bacteria 2333
210 Ga0495660_0058879 3300046810 Bacteria 2067
211 Ga0495581_0005677 3300047315 Bacteria 7239
212 Ga0495604_0012362 3300047317 Bacteria 6787
213 Ga0495674_0220660 3300047319 Bacteria 1567
214 Ga0495674_0263274 3300047319 Bacteria 1416
215 Ga0495676_0001252 3300047321 Bacteria 21788
216 Ga0495676_0087774 3300047321 Bacteria 2335
217 Ga0495683_0032531 3300047323 Bacteria 2656
218 Ga0495683_0122102 3300047323 Bacteria 1235
219 Ga0495687_001673 3300047443 Bacteria 19799
220 Ga0495687_045272 3300047443 Bacteria 1906
221 Ga0495675_0027700 3300047444 Bacteria 3612
222 Ga0495685_000948 3300047447 Bacteria 8778
223 Ga0495685_001986 3300047447 Bacteria 6343
224 Ga0495593_0003590 3300047673 Bacteria 9268
225 Ga0495602_0020736 3300048088 Bacteria 6490
226 Ga0495614_0004711 3300048089 Bacteria 6151
227 Ga0495614_0014135 3300048089 Bacteria 3497
228 Ga0496104_0330787 3300048907 Bacteria 1437
229 Ga0496109_0128751 3300048912 Bacteria 2362
230 Ga0496117_0001086 3300048920 Bacteria 41154
231 Ga0496118_0000739 3300048921 Bacteria 52785
232 Ga0496119_0038045 3300048922 Bacteria 3114
233 Ga0496119_0150768 3300048922 Bacteria 1246
234 Ga0496122_0069854 3300048925 Bacteria 2513
235 Ga0496123_0029138 3300048926 Bacteria 4074
236 Ga0496124_0000181 3300048927 Bacteria 124426
237 Ga0496126_0053627 3300048929 Bacteria 3657
238 Ga0495678_071635 3300049459 Bacteria 1269
239 Ga0501033_0011277 3300049570 Bacteria 6843
240 Ga0501034_0049552 3300049571 Bacteria 4238
241 Ga0501034_0074657 3300049571 Bacteria 3398
242 Ga0501038_0006476 3300049574 Bacteria 10836
243 Ga0501043_0143436 3300049579 Bacteria 1870
244 Ga0501046_0012175 3300049580 Bacteria 7332
245 Ga0501047_0015119 3300049581 Bacteria 7348
246 Ga0501047_0055049 3300049581 Bacteria 3847
247 Ga0501070_0052562 3300049586 Bacteria 3382
248 Ga0501035_0128324 3300049822 Bacteria 2212
249 Ga0501044_0270129 3300049823 Bacteria 1636
250 nmdc:mga03n38_39774_c1 3300050490 Bacteria 2040
251 nmdc:mga06z11_821_c1 3300050494 Bacteria 11363
252 nmdc:mga0qj67_129932_c1 3300050509 Bacteria 2040
253 Ga0500610_0100745 3300053079 Bacteria 1495
254 Ga0500644_0139982 3300053088 Bacteria 961
255 Ga0500641_0010059 3300053096 Bacteria 3411
256 Ga0500553_032524 3300053101 Bacteria 2598
257 Ga0500560_004384 3300053107 Bacteria 2994
258 Ga0500572_006229 3300053111 Bacteria 2728
259 Ga0500594_0004486 3300053118 Bacteria 3077
260 Ga0500573_0032190 3300053140 Bacteria 3026
261 Ga0500577_0117364 3300053142 Bacteria 1104
262 Ga0500600_0092459 3300053149 Bacteria 1612
263 Ga0466962_0000393 3300061719 Bacteria 18880
264 2920882955 2920879853 Bacteria 4216831
265 2547409373 2547132111 Bacteria 8013147
266 2555229291 2554235227 Bacteria 3637389
267 2585303210 2582581313 Bacteria 10042643
268 2585312573 2582581314 Bacteria 11452267
269 2644266832 2643221647 Bacteria 10741251
270 2644440560 2643221678 Bacteria 9540101
271 2655034418 2654587600 Bacteria 3911798
272 2753265484 2751185782 Bacteria 11227053
273 2753303082 2751185788 Bacteria 4541048
274 2785339206 2784746763 Bacteria 9783172
275 2785374034 2784746768 Bacteria 10036182
276 2786674274 2786546132 Bacteria 10419719
277 2793978970 2791355406 Bacteria 11364898
278 2808845771 2808606359 Bacteria 9866990
279 2812353821 2811994879 Bacteria 9313447
280 2816511993 2816332139 Bacteria 9138787
281 2848551583 2848551377 Bacteria 3720646
282 2852639024 2852635781 Bacteria 8251373
283 2862283812 2862281513 Bacteria 9621493
284 2862382994 2862382967 Bacteria 10317375
285 2862580691 2862574272 Bacteria 10567477
286 2862993358 2862993130 Bacteria 3860849
287 2867432062 2867428634 Bacteria 9590268
288 2883823932 2883821847 Bacteria 5121194
289 2895433652 2895427314 Bacteria 13147766
290 2904431808 2904430863 Bacteria 3486923
291 2904504319 2904501621 Bacteria 3401437
292 2908676525 2908674828 Bacteria 3382763
293 2909077333 2909074476 Bacteria 3436050
294 2919041731 2919039151 Bacteria 3391018
295 2919042490 2919042368 Bacteria 3905917
296 2919470649 2919468124 Bacteria 9133025
297 2928107860 2928104781 Bacteria 3877447
298 2928502976 2928500415 Bacteria 3384541
299 2946071874 2946064051 Bacteria 8957905
300 2947232755 2947224130 Bacteria 9938529
301 2954381941 2954380949 Bacteria 10050426
302 2954681137 2954673503 Bacteria 9685905
303 2954683020 2954682443 Bacteria 9862841
304 2954692749 2954691527 Bacteria 10720516
305 2954707822 2954701450 Bacteria 10834262
306 2954712399 2954711539 Bacteria 10867210
307 2954722347 2954721474 Bacteria 10456478
308 2954739504 2954731030 Bacteria 10243860
309 2954741233 2954740390 Bacteria 10229294
310 2954758331 2954749733 Bacteria 10366972
311 2954760244 2954759201 Bacteria 9358192
312 2964328770 2964326757 Bacteria 3290868
313 2984555298 2984551494 Bacteria 3877562
314 2990066832 2990059506 Bacteria 9321252
315 2990092000 2990088156 Bacteria 6657676
316 8008564774 8008558824 Bacteria 10610750
317 8047902627 8047893842 Bacteria 11723082
318 8048370425 8048369669 Bacteria 11666822
319 8048388997 8048379754 Bacteria 11877923
320 JGI24737J22298_10010766
321 JGI24735J21928_10045390
322 rootH2_10081294
323 rootH1_10143860
324 Ga0070683_100019665
325 Ga0070683_100285865
326 Ga0070670_100171616
327 Ga0068869_100004909
328 Ga0068868_100006246
329 Ga0070689_100408452
330 Ga0070661_100032655
331 Ga0070668_100000134
332 Ga0070675_100004820
333 Ga0070659_100005609
334 Ga0070667_100094830
335 Ga0070663_100038488
336 Ga0070662_100377658
337 Ga0068867_100187589
338 Ga0070672_100190053
339 Ga0070693_100222559
340 Ga0068855_100757314
341 Ga0070664_100005868
342 Ga0068852_100246116
343 Ga0068852_100468347
344 Ga0068864_100452731
345 Ga0068858_100019881
346 Ga0068860_100061495
347 Ga0081540_1013236
348 Ga0081539_10006742
349 Ga0081539_10013786
350 Ga0081539_10099925
351 Ga0075365_10158619
352 Ga0075363_100001215
353 Ga0070712_100061195
354 Ga0075367_10006608
355 Ga0075370_10019817
356 Ga0068871_100433850
357 Ga0075430_100119204
358 Ga0099795_10000012
359 Ga0111539_10000786
360 Ga0105245_10000580
361 Ga0114129_10338514
362 Ga0105248_10229156
363 Ga0099796_10000209
364 Ga0105246_10261667
365 Ga0157369_10107939
366 Ga0157372_10101791
367 Ga0157377_10015870
368 Ga0183367_1004
369 Ga0213876_10022331
370 Ga0213875_10013095
371 Ga0207426_1009202
372 Ga0207710_10093814
373 Ga0207688_10082356
374 Ga0207647_10008941
375 Ga0207649_10029774
376 Ga0207652_10173231
377 Ga0207659_10004980
378 Ga0207687_10016620
379 Ga0207700_10128003
380 Ga0207706_10011993
381 Ga0207689_10004747
382 Ga0207679_10064001
383 Ga0207668_10000407
384 Ga0207668_10068633
385 Ga0207677_10007315
386 Ga0207678_10033762
387 Ga0207678_10150811
388 Ga0207641_10006816
389 Ga0207676_10454734
390 Ga0207674_10004749
391 Ga0207674_10012469
392 Ga0207675_100072496
393 Ga0207683_10065347
394 Ga0207683_10166751
395 Ga0207698_10037096
396 Ga0207698_10135055
397 Ga0209179_1000002
398 Ga0268264_10037643
399 Ga0268264_10271424
400 Ga0307517_10057280
401 Ga0307515_10000275
402 Ga0307515_10006168
403 Ga0307515_10020927
404 Ga0307515_10038082
405 Ga0307515_10051226
406 Ga0307515_10113617
407 Ga0307511_10000186
408 Ga0307512_10003332
409 Ga0307512_10013932
410 Ga0307512_10032255
411 Ga0307512_10071321
412 Ga0307513_10002464
413 Ga0307513_10075480
414 Ga0307513_10076045
415 Ga0307513_10144576
416 Ga0307509_10030965
417 Ga0307509_10097561
418 Ga0307508_10033398
419 Ga0307508_10062624
420 Ga0307514_10001314
421 Ga0307514_10043334
422 Ga0307516_10003453
423 Ga0307516_10005214
424 Ga0307516_10011052
425 Ga0307516_10041275
426 Ga0307516_10055889
427 Ga0307516_10111669
428 Ga0307516_10124807
429 Ga0307405_10038828
430 Ga0307518_10070875
431 Ga0307518_10082974
432 Ga0307410_10060385
433 Ga0307406_10061915
434 Ga0307407_10035201
435 Ga0307409_100005015
436 Ga0307416_100015475
437 Ga0307416_100041681
438 Ga0307416_100110243
439 Ga0307411_10195861
440 Ga0307507_10024876
441 Ga0307507_10063622
442 Ga0307507_10067492
443 Ga0307510_10177959
444 Ga0307510_10241065
445 Ga0373950_0006257
446 Ga0373928_0022898
447 Ga0373940_0058664
448 Ga0373951_0006113
449 Ga0373941_0018157
450 Ga0373962_0002502
451 Ga0373947_0018119
452 Ga0373937_0057730
453 Ga0395898_0021863
454 Ga0436364_0331557
455 Ga0436365_0098699
456 Ga0439436_0001028
457 Ga0439436_0003174
458 Ga0439433_0011615
459 Ga0439449_0003629
460 Ga0439449_0004350
461 Ga0439455_0002646
462 Ga0439457_001926
463 Ga0450903_000518
464 Ga0439458_0000670
465 Ga0466969_0000346
466 Ga0466972_0004193
467 Ga0466965_0004482
468 Ga0466965_0050496
469 Ga0466966_0005080
470 Ga0466961_0002558
471 Ga0466961_0012315
472 Ga0466963_0000184
473 Ga0466963_0043216
474 Ga0466963_0285730
475 Ga0466964_0015229
476 Ga0466971_0001168
477 Ga0466971_0119457
478 Ga0466970_0007780
479 Ga0466970_0018428
480 Ga0466970_0027720
481 Ga0466957_0000619
482 Ga0466959_0000133
483 Ga0466959_0000388
484 Ga0466959_0162279
485 Ga0451576_0038391
486 Ga0466958_0000617
487 Ga0466958_0071609
488 Ga0466958_0091682
489 Ga0495617_013731
490 Ga0495603_0002730
491 Ga0495629_0098926
492 Ga0495629_0239825
493 Ga0495638_0020896
494 Ga0495638_0131312
495 Ga0495651_0008197
496 Ga0495651_0024986
497 Ga0495662_0032834
498 Ga0495664_0002996
499 Ga0495585_0020507
500 Ga0495585_0040257
501 Ga0495594_0009359
502 Ga0495594_0017065
503 Ga0495594_0047674
504 Ga0495607_0066262
505 Ga0495583_0041572
506 Ga0495616_0132198
507 Ga0495618_0033655
508 Ga0495630_0039416
509 Ga0495652_0017051
510 Ga0495586_0046885
511 Ga0495587_0003680
512 Ga0495609_0105973
513 Ga0495622_0018381
514 Ga0495667_0198108
515 Ga0495668_0144956
516 Ga0495634_0005613
517 Ga0495611_0024347
518 Ga0495625_0004049
519 Ga0495625_0121099
520 Ga0495635_0000753
521 Ga0495588_0003021
522 Ga0495657_0024867
523 Ga0495646_0001593
524 Ga0495613_0001960
525 Ga0495589_0025595
526 Ga0495589_0065253
527 Ga0495600_0026558
528 Ga0495660_0048083
529 Ga0495660_0058879
530 Ga0495581_0005677
531 Ga0495604_0012362
532 Ga0495674_0220660
533 Ga0495674_0263274
534 Ga0495676_0001252
535 Ga0495676_0087774
536 Ga0495683_0032531
537 Ga0495683_0122102
538 Ga0495687_001673
539 Ga0495687_045272
540 Ga0495675_0027700
541 Ga0495685_000948
542 Ga0495685_001986
543 Ga0495593_0003590
544 Ga0495602_0020736
545 Ga0495614_0004711
546 Ga0495614_0014135
547 Ga0496104_0330787
548 Ga0496109_0128751
549 Ga0496117_0001086
550 Ga0496118_0000739
551 Ga0496119_0038045
552 Ga0496119_0150768
553 Ga0496122_0069854
554 Ga0496123_0029138
555 Ga0496124_0000181
556 Ga0496126_0053627
557 Ga0495678_071635
558 Ga0501033_0011277
559 Ga0501034_0049552
560 Ga0501034_0074657
561 Ga0501038_0006476
562 Ga0501043_0143436
563 Ga0501046_0012175
564 Ga0501047_0015119
565 Ga0501047_0055049
566 Ga0501070_0052562
567 Ga0501035_0128324
568 Ga0501044_0270129
569 nmdc:mga03n38_39774_c1
570 nmdc:mga06z11_821_c1
571 nmdc:mga0qj67_129932_c1
572 Ga0500610_0100745
573 Ga0500644_0139982
574 Ga0500641_0010059
575 Ga0500553_032524
576 Ga0500560_004384
577 Ga0500572_006229
578 Ga0500594_0004486
579 Ga0500573_0032190
580 Ga0500577_0117364
581 Ga0500600_0092459
582 Ga0466962_0000393
583 2920882955
584 2547409373
585 2555229291
586 2585303210
587 2585312573
588 2644266832
589 2644440560
590 2655034418
591 2753265484
592 2753303082
593 2785339206
594 2785374034
595 2786674274
596 2793978970
597 2808845771
598 2812353821
599 2816511993
600 2848551583
601 2852639024
602 2862283812
603 2862382994
604 2862580691
605 2862993358
606 2867432062
607 2883823932
608 2895433652
609 2904431808
610 2904504319
611 2908676525
612 2909077333
613 2919041731
614 2919042490
615 2919470649
616 2928107860
617 2928502976
618 2946071874
619 2947232755
620 2954381941
621 2954681137
622 2954683020
623 2954692749
624 2954707822
625 2954712399
626 2954722347
627 2954739504
628 2954741233
629 2954758331
630 2954760244
631 2964328770
632 2984555298
633 2990066832
634 2990092000
635 8008564774
636 8047902627
637 8048370425
638 8048388997

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

134

322

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
4jbw-assembly2.cif.gz_I crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc 0.8135 10 294
8ja7-assembly1.cif.gz_B cryo-em structure of mycobacterium tuberculosis lpqy-sugabc in complex with trehalose 0.8124 21 297
8hpn-assembly1.cif.gz_B lpqy-sugabc in state 3 0.8017 20 297
4jbw-assembly2.cif.gz_I crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc 0.7981 10 294
8hpn-assembly1.cif.gz_B lpqy-sugabc in state 3 0.7937 20 297
ID Description Score Start End Superfamily
af_O53483_6_271_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9046 22 296 1.10.3720.10
af_I6Y1U3_2_266_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8736 19 296 1.10.3720.10
af_P9WG01_5_265_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8678 21 296 1.10.3720.10
af_O53483_6_271_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8661 22 296 1.10.3720.10
af_P9WG01_5_265_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8617 21 296 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A147F0B2-F1-model_v4 Sugar ABC transporter permease 0.9432 19 305 GO:0005886
GO:0055085
AF-A0A147F0B2-F1-model_v4 Sugar ABC transporter permease 0.94 19 305 GO:0005886
GO:0055085
AF-A0A0Q9JVV9-F1-model_v4 Sugar ABC transporter permease 0.9332 20 305 GO:0005886
GO:0055085
AF-A0A0N1G1N5-F1-model_v4 ABC-type transporter, integral membrane subunit 0.9331 29 305 GO:0005886
GO:0055085
AF-A0A316HZ72-F1-model_v4 Carbohydrate ABC transporter membrane protein 2 (CUT1 family) 0.9327 18 305 GO:0005886
GO:0055085

Map