F404985

General Info

Members Datasets Scaffolds Average Seq Length
319 205 638 294

Family's Representative Sequence

Representative Sequence 3300005530|Ga0070679_100046156|Ga0070679_1000461562
Length 335
Sequence LVGGVSLIVARWTTPTGRAARRYPRCMALGLPSTLPGGAPSVHESLRDLLASGGRSYSFEFFPPKDDAGEAQLWEAIRRLESLRPTFVSVTYGAGGSTRDRTVRITRQIARDTTLTPVAHLTCVSASVADLRRVIGQYADAGVRNVLALRGDPPRGLDVPWQPHPAGLEHADALVELLRSMGSFCVGVAAFPDVHPESPDADHDARVLLAKARAGADFAVTQLFLESSSYTGLVDRVRDLGCDLPIIPGIMPVTSLSQLRRFAELSGVAVPPHVEQRLREAGDDPASVRAAGIRLATELCRDVLDAGAPGLHFYTLNRSTATLEVYENLGLHAGV

Samples

Sample ID Description Type Environment
1 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
2 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
42 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
45 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
66 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
71 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
111 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
114 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
115 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
116 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
117 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
118 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
119 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
120 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
121 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
124 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
125 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
126 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
127 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
128 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
129 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
130 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
131 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
132 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
133 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
134 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
135 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
136 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
143 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
144 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
145 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
146 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
147 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
150 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
151 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
158 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
161 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
162 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
166 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
167 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
168 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
169 2501939600 Micromonospora sp. L5 Isolate Unclassified
170 2643221576 Nocardioides sp. Root614 Isolate Unclassified
171 2643221590 Nocardioides sp. Root682 Isolate Unclassified
172 2643221641 Nocardioides sp. Root122 Isolate Unclassified
173 2643221679 Angustibacter sp. Root456 Isolate Unclassified
174 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
175 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
176 2739367898 Nocardioides sp. CF479 Isolate Unclassified
177 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
178 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
179 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
180 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
181 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
182 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
183 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
184 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
185 2858868258 Micromonospora sp. MH33 Isolate Unclassified
186 2858882152 Micromonospora noduli MED15 Isolate Nodule
187 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
188 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
189 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
190 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
191 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
192 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
193 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
194 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
195 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
196 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
197 2902582711 Micromonospora sp. AP08 Isolate Unclassified
198 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
199 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
200 649633069 Micromonospora sp. L5 Isolate Unclassified
201 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
202 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
203 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule
204 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
205 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 88.09
Metatranscriptomes 0.31
Isolates 11.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.27
Nodule 1.57
Rhizoplane 13.17
Rhizosphere 67.71
Stem 0
Stem Tuber 0
Unclassified 0.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070679_100046156 3300005530 Bacteria 4342
2 JGI24749J21850_1008050 3300002076 Bacteria 1467
3 JGI25406J46586_10034461 3300003203 Bacteria 1858
4 Ga0070658_10056045 3300005327 Bacteria 3203
5 Ga0070676_10038641 3300005328 Bacteria 2757
6 Ga0070690_100148357 3300005330 Bacteria 1598
7 Ga0070682_100091565 3300005337 Bacteria 1990
8 Ga0070682_100187768 3300005337 Bacteria 1449
9 Ga0068868_100080383 3300005338 Bacteria 2612
10 Ga0068868_100237435 3300005338 Bacteria 1530
11 Ga0070689_100003451 3300005340 Bacteria 10516
12 Ga0070689_100090541 3300005340 Bacteria 2410
13 Ga0070692_10083156 3300005345 Bacteria 1728
14 Ga0070668_100019914 3300005347 Bacteria 5056
15 Ga0070669_100102930 3300005353 Bacteria 2157
16 Ga0070669_100219377 3300005353 Bacteria 1503
17 Ga0070675_100475758 3300005354 Bacteria 1123
18 Ga0070674_100058647 3300005356 Bacteria 2677
19 Ga0070674_100174893 3300005356 Bacteria 1640
20 Ga0070688_100006614 3300005365 Bacteria 6205
21 Ga0070659_100316547 3300005366 Bacteria 1304
22 Ga0070667_100048552 3300005367 Bacteria 3573
23 Ga0070667_100116918 3300005367 Bacteria 2316
24 Ga0070711_100403694 3300005439 Bacteria 1110
25 Ga0070700_100052760 3300005441 Bacteria 2536
26 Ga0070700_100176736 3300005441 Bacteria 1482
27 Ga0070694_100059680 3300005444 Bacteria 2599
28 Ga0070663_100007163 3300005455 Bacteria 6774
29 Ga0070678_100078490 3300005456 Bacteria 2494
30 Ga0070679_100124259 3300005530 Bacteria 2563
31 Ga0070679_100316947 3300005530 Bacteria 1509
32 Ga0070684_100147690 3300005535 Bacteria 2129
33 Ga0070684_100442579 3300005535 Bacteria 1201
34 Ga0070686_100006316 3300005544 Bacteria 6581
35 Ga0070695_100010785 3300005545 Bacteria 5461
36 Ga0070696_100040024 3300005546 Bacteria 3236
37 Ga0070665_100085365 3300005548 Bacteria 3162
38 Ga0068855_100205504 3300005563 Bacteria 2216
39 Ga0070664_100200636 3300005564 Bacteria 1780
40 Ga0068857_100156657 3300005577 Bacteria 2065
41 Ga0068857_100204541 3300005577 Bacteria 1800
42 Ga0068856_100031199 3300005614 Bacteria 5213
43 Ga0068856_100129763 3300005614 Bacteria 2525
44 Ga0070702_100002501 3300005615 Bacteria 7962
45 Ga0070702_100093362 3300005615 Bacteria 1830
46 Ga0068852_100008773 3300005616 Bacteria 7478
47 Ga0068852_100384490 3300005616 Bacteria 1377
48 Ga0068864_100011260 3300005618 Bacteria 7390
49 Ga0068851_10047384 3300005834 Bacteria 2177
50 Ga0068870_10186744 3300005840 Bacteria 1248
51 Ga0068860_100001063 3300005843 Bacteria 30293
52 Ga0068860_100056946 3300005843 Bacteria 3715
53 Ga0081538_10038205 3300005981 Bacteria 3102
54 Ga0081539_10002457 3300005985 Bacteria 26107
55 Ga0081539_10061536 3300005985 Bacteria 2056
56 Ga0070717_10338139 3300006028 Bacteria 1344
57 Ga0075365_10015092 3300006038 Bacteria 4664
58 Ga0075365_10015293 3300006038 Bacteria 4638
59 Ga0075365_10323388 3300006038 Bacteria 1086
60 Ga0075368_10080419 3300006042 Bacteria 1326
61 Ga0075364_10006270 3300006051 Bacteria 6979
62 Ga0075364_10031057 3300006051 Bacteria 3431
63 Ga0075364_10083986 3300006051 Bacteria 2108
64 Ga0075364_10255941 3300006051 Bacteria 1190
65 Ga0075367_10021965 3300006178 Bacteria 3573
66 Ga0075370_10006065 3300006353 Bacteria 6057
67 Ga0075428_100001108 3300006844 Bacteria 28692
68 Ga0075428_100075236 3300006844 Bacteria 3688
69 Ga0075428_100190742 3300006844 Bacteria 2217
70 Ga0111539_10024766 3300009094 Bacteria 7361
71 Ga0111539_10198528 3300009094 Bacteria 2340
72 Ga0111539_10229880 3300009094 Bacteria 2160
73 Ga0111539_10358068 3300009094 Bacteria 1698
74 Ga0111539_10585980 3300009094 Bacteria 1299
75 Ga0105245_10017227 3300009098 Bacteria 6303
76 Ga0105245_10078460 3300009098 Bacteria 3013
77 Ga0105245_10558495 3300009098 Bacteria 1167
78 Ga0114129_10094004 3300009147 Bacteria 4153
79 Ga0114129_10201254 3300009147 Bacteria 2697
80 Ga0114129_10382001 3300009147 Bacteria 1860
81 Ga0105243_10052219 3300009148 Bacteria 3237
82 Ga0105243_10287422 3300009148 Bacteria 1484
83 Ga0105241_10159614 3300009174 Bacteria 1852
84 Ga0105242_10025362 3300009176 Bacteria 4691
85 Ga0105242_10111000 3300009176 Bacteria 2337
86 Ga0105248_10034371 3300009177 Bacteria 5668
87 Ga0105237_10222073 3300009545 Bacteria 1889
88 Ga0105237_10469007 3300009545 Bacteria 1265
89 Ga0105238_10059162 3300009551 Bacteria 3839
90 Ga0105238_10171742 3300009551 Bacteria 2144
91 Ga0105249_10011252 3300009553 Bacteria 7855
92 Ga0105249_10076227 3300009553 Bacteria 3108
93 Ga0105249_10133818 3300009553 Bacteria 2370
94 Ga0105239_10028934 3300010375 Bacteria 6090
95 Ga0105239_10057869 3300010375 Bacteria 4252
96 Ga0105246_10060616 3300011119 Unclassified 2630
97 Ga0157369_10011490 3300013105 Bacteria 10056
98 Ga0157369_10356408 3300013105 Bacteria 1519
99 Ga0163162_10651819 3300013306 Bacteria 1176
100 Ga0157372_10024599 3300013307 Bacteria 6544
101 Ga0157372_10129541 3300013307 Bacteria 2902
102 Ga0157372_10171799 3300013307 Bacteria 2508
103 Ga0157372_10255998 3300013307 Bacteria 2032
104 Ga0157375_10063555 3300013308 Bacteria 3673
105 Ga0157375_10567559 3300013308 Bacteria 1296
106 Ga0163163_10148966 3300014325 Bacteria 2385
107 Ga0163163_10337549 3300014325 Bacteria 1562
108 Ga0157380_10116494 3300014326 Bacteria 2255
109 Ga0157380_10547001 3300014326 Bacteria 1135
110 Ga0182008_10051948 3300014497 Bacteria 2032
111 Ga0157377_10030226 3300014745 Bacteria 2933
112 Ga0157377_10036161 3300014745 Bacteria 2715
113 Ga0157377_10086122 3300014745 Bacteria 1846
114 Ga0157379_10064933 3300014968 Bacteria 3262
115 Ga0157379_10114626 3300014968 Bacteria 2422
116 Ga0157379_10491793 3300014968 Bacteria 1136
117 Ga0157376_10665504 3300014969 Bacteria 1043
118 Ga0206353_11522617 3300020082 Bacteria 2872
119 Ga0213872_10046471 3300021361 Bacteria 1975
120 Ga0207642_10015120 3300025899 Bacteria 2866
121 Ga0207688_10013871 3300025901 Bacteria 4381
122 Ga0207688_10064082 3300025901 Bacteria 2074
123 Ga0207688_10091901 3300025901 Bacteria 1743
124 Ga0207645_10019049 3300025907 Bacteria 4506
125 Ga0207705_10047279 3300025909 Bacteria 3094
126 Ga0207654_10092806 3300025911 Bacteria 1844
127 Ga0207663_10355539 3300025916 Bacteria 1110
128 Ga0207657_10042841 3300025919 Bacteria 3991
129 Ga0207652_10124904 3300025921 Bacteria 2291
130 Ga0207650_10296361 3300025925 Bacteria 1320
131 Ga0207650_10609010 3300025925 Bacteria 919
132 Ga0207659_10258363 3300025926 Bacteria 1416
133 Ga0207687_10007749 3300025927 Bacteria 7045
134 Ga0207687_10058023 3300025927 Bacteria 2722
135 Ga0207687_10392369 3300025927 Bacteria 1140
136 Ga0207664_10158601 3300025929 Bacteria 1928
137 Ga0207644_10466151 3300025931 Bacteria 1039
138 Ga0207690_10234393 3300025932 Bacteria 1411
139 Ga0207686_10025022 3300025934 Bacteria 3466
140 Ga0207709_10003115 3300025935 Bacteria 9982
141 Ga0207709_10027787 3300025935 Bacteria 3264
142 Ga0207709_10083953 3300025935 Bacteria 2061
143 Ga0207670_10004219 3300025936 Bacteria 7709
144 Ga0207670_10072113 3300025936 Bacteria 2390
145 Ga0207669_10037542 3300025937 Bacteria 2781
146 Ga0207704_10215514 3300025938 Bacteria 1416
147 Ga0207691_10046826 3300025940 Bacteria 3972
148 Ga0207691_10247513 3300025940 Bacteria 1540
149 Ga0207711_10016387 3300025941 Bacteria 6160
150 Ga0207689_10030998 3300025942 Bacteria 4455
151 Ga0207661_10267427 3300025944 Bacteria 1525
152 Ga0207679_10190767 3300025945 Bacteria 1704
153 Ga0207679_10254983 3300025945 Bacteria 1493
154 Ga0207651_10158625 3300025960 Bacteria 1771
155 Ga0207712_10003996 3300025961 Bacteria 9306
156 Ga0207712_10087833 3300025961 Bacteria 2281
157 Ga0207668_10025072 3300025972 Bacteria 3855
158 Ga0207640_10055793 3300025981 Bacteria 2590
159 Ga0207677_10047924 3300026023 Bacteria 2873
160 Ga0207639_10161635 3300026041 Bacteria 1888
161 Ga0207678_10018978 3300026067 Bacteria 6041
162 Ga0207708_10002767 3300026075 Bacteria 12884
163 Ga0207708_10006263 3300026075 Bacteria 8817
164 Ga0207702_10082081 3300026078 Bacteria 2802
165 Ga0207702_10350463 3300026078 Bacteria 1413
166 Ga0207648_10051450 3300026089 Bacteria 3600
167 Ga0207648_10102972 3300026089 Bacteria 2503
168 Ga0207648_10131473 3300026089 Bacteria 2203
169 Ga0207648_10417752 3300026089 Bacteria 1217
170 Ga0207676_10020383 3300026095 Bacteria 4852
171 Ga0207674_10287673 3300026116 Bacteria 1592
172 Ga0207674_10309010 3300026116 Bacteria 1530
173 Ga0207674_10508500 3300026116 Bacteria 1164
174 Ga0207675_100004097 3300026118 Bacteria 14105
175 Ga0207675_100041389 3300026118 Bacteria 4303
176 Ga0207675_100178947 3300026118 Bacteria 2030
177 Ga0207683_10016810 3300026121 Bacteria 6227
178 Ga0207683_10228701 3300026121 Bacteria 1696
179 Ga0207698_10290445 3300026142 Bacteria 1517
180 Ga0207698_10398717 3300026142 Bacteria 1314
181 Ga0265356_1000330 3300028017 Bacteria 8705
182 Ga0268266_10059245 3300028379 Bacteria 3298
183 Ga0268266_10131296 3300028379 Bacteria 2240
184 Ga0268264_10001069 3300028381 Bacteria 27210
185 Ga0268264_10200174 3300028381 Bacteria 1827
186 Ga0268264_10266595 3300028381 Bacteria 1598
187 Ga0307513_10000561 3300031456 Bacteria 53247
188 Ga0316579_10000474 3300031691 Bacteria 12995
189 Ga0307413_10025926 3300031824 Bacteria 3223
190 Ga0307410_10063836 3300031852 Bacteria 2528
191 Ga0307409_100059843 3300031995 Bacteria 2967
192 Ga0373931_0143304 3300035691 Bacteria 1386
193 Ga0395899_0160753 3300037312 Bacteria 1587
194 Ga0395905_0246630 3300037471 Bacteria 1669
195 Ga0436364_0975580 3300037853 Bacteria 4750
196 Ga0395901_0018315 3300038443 Bacteria 7150
197 Ga0400485_17869 3300038735 Bacteria 38883
198 Ga0400486_31407 3300038742 Bacteria 45426
199 Ga0436365_0116184 3300039437 Bacteria 2892
200 Ga0436360_0810703 3300039438 Bacteria 1085
201 Ga0436361_0990945 3300039447 Bacteria 4555
202 Ga0436362_1260908 3300039453 Bacteria 1729
203 Ga0451791_0866637 3300041451 Bacteria 1558
204 Ga0451837_1721254 3300041494 Bacteria 1322
205 Ga0451577_0125263 3300042876 Bacteria 2302
206 Ga0466965_0050930 3300044683 Bacteria 2054
207 Ga0466957_0203671 3300044842 Bacteria 1301
208 Ga0466960_0023041 3300044901 Bacteria 2791
209 Ga0466967_0007346 3300045976 Bacteria 7936
210 Ga0466967_0048889 3300045976 Bacteria 3696
211 Ga0466967_0271882 3300045976 Bacteria 1624
212 Ga0466967_0344509 3300045976 Bacteria 1442
213 Ga0466967_0707193 3300045976 Bacteria 998
214 Ga0495641_0094830 3300046461 Bacteria 1333
215 Ga0496101_0049928 3300048904 Bacteria 3010
216 Ga0496101_0385506 3300048904 Bacteria 1103
217 Ga0496102_0006449 3300048905 Bacteria 10006
218 Ga0496102_0042421 3300048905 Bacteria 4122
219 Ga0496103_0078490 3300048906 Bacteria 2074
220 Ga0496104_0176523 3300048907 Bacteria 2046
221 Ga0496104_0238982 3300048907 Bacteria 1728
222 Ga0496104_0338302 3300048907 Bacteria 1418
223 Ga0496105_0176195 3300048908 Bacteria 1752
224 Ga0496105_0211895 3300048908 Bacteria 1579
225 Ga0496106_0006527 3300048909 Bacteria 8635
226 Ga0496106_0019900 3300048909 Bacteria 4977
227 Ga0496106_0228340 3300048909 Bacteria 1486
228 Ga0496107_0005613 3300048910 Bacteria 8595
229 Ga0496107_0034135 3300048910 Bacteria 3642
230 Ga0496108_0002999 3300048911 Bacteria 13564
231 Ga0496108_0067280 3300048911 Bacteria 3022
232 Ga0496108_0125382 3300048911 Bacteria 2204
233 Ga0496108_0296011 3300048911 Bacteria 1409
234 Ga0496109_0012166 3300048912 Bacteria 7422
235 Ga0496109_0034123 3300048912 Bacteria 4580
236 Ga0496109_0046087 3300048912 Bacteria 3959
237 Ga0496109_0143007 3300048912 Bacteria 2237
238 Ga0496109_0387136 3300048912 Bacteria 1321
239 Ga0496110_0019333 3300048913 Bacteria 5730
240 Ga0496110_0168902 3300048913 Bacteria 1984
241 Ga0496110_0243081 3300048913 Bacteria 1638
242 Ga0496110_0417818 3300048913 Bacteria 1223
243 Ga0496110_0504397 3300048913 Unclassified 1101
244 Ga0496111_0028823 3300048914 Bacteria 3937
245 Ga0496111_0045530 3300048914 Bacteria 3157
246 Ga0496112_0008226 3300048915 Bacteria 9331
247 Ga0496112_0464805 3300048915 Bacteria 1203
248 Ga0496113_0134641 3300048916 Bacteria 1941
249 Ga0496113_0164953 3300048916 Bacteria 1752
250 Ga0496114_0066733 3300048917 Bacteria 3017
251 Ga0496114_0069332 3300048917 Bacteria 2961
252 Ga0496114_0091388 3300048917 Unclassified 2585
253 Ga0496114_0104414 3300048917 Bacteria 2423
254 Ga0496114_0136321 3300048917 Bacteria 2123
255 Ga0496114_0340100 3300048917 Bacteria 1327
256 Ga0501032_0084669 3300049569 Bacteria 2108
257 Ga0501036_0064677 3300049572 Bacteria 3096
258 Ga0501036_0129006 3300049572 Bacteria 2135
259 Ga0501039_0117470 3300049575 Bacteria 2083
260 Ga0501041_0295602 3300049577 Bacteria 1020
261 Ga0501047_0000015 3300049581 Bacteria 307932
262 Ga0501048_0170878 3300049582 Bacteria 1540
263 Ga0501077_0276398 3300049593 Bacteria 1069
264 Ga0501079_0301991 3300049741 Bacteria 1253
265 Ga0501080_0400889 3300049742 Bacteria 1234
266 Ga0501045_0098016 3300049824 Bacteria 2169
267 nmdc:mga00v17_149067_c1 3300050491 Bacteria 1502
268 nmdc:mga00v17_247811_c1 3300050491 Bacteria 1155
269 nmdc:mga00v17_26003_c1 3300050491 Bacteria 3406
270 nmdc:mga00v17_39059_c1 3300050491 Bacteria 2841
271 nmdc:mga0yw44_127107_c1 3300050492 Bacteria 1647
272 nmdc:mga0yw44_21409_c1 3300050492 Bacteria 3606
273 nmdc:mga0yw44_36435_c1 3300050492 Bacteria 2899
274 nmdc:mga0yw44_4117_c1 3300050492 Bacteria 6173
275 nmdc:mga09592_132912_c1 3300050508 Bacteria 2142
276 nmdc:mga09592_84558_c1 3300050508 Bacteria 2705
277 nmdc:mga0qj67_102431_c1 3300050509 Bacteria 2308
278 nmdc:mga08y16_21544_c2 3300050511 Bacteria 2160
279 nmdc:mga08y16_243029_c1 3300050511 Bacteria 1861
280 Ga0500646_0001969 3300053090 Bacteria 5369
281 Ga0500604_0036214 3300053151 Bacteria 1471
282 Ga0501082_0325561 3300060353 Bacteria 1339
283 2501945143 2501939600 Bacteria 6907073
284 2643889010 2643221576 Bacteria 5214352
285 2643958065 2643221590 Bacteria 5214697
286 2644228851 2643221641 Bacteria 4490190
287 2644446161 2643221679 Bacteria 3839507
288 2644457481 2643221681 Bacteria 3707866
289 2644537257 2643221697 Bacteria 3575694
290 2740166975 2739367898 Bacteria 4367674
291 2772644184 2772190715 Bacteria 6959372
292 2816504223 2816332139 Bacteria 9138787
293 2831936317 2831935698 Bacteria 5963223
294 2855676409 2855670206 Bacteria 7120389
295 2855678669 2855676851 Bacteria 7063653
296 2856864504 2856858025 Bacteria 7255264
297 2857289300 2857288857 Bacteria 7189066
298 2858855188 2858848962 Bacteria 6963058
299 2858874049 2858868258 Bacteria 7683772
300 2858888753 2858882152 Bacteria 7230291
301 2858889027 2858888857 Bacteria 7060307
302 2858897400 2858895516 Bacteria 7378898
303 2867303512 2867302475 Bacteria 7087181
304 2867316132 2867312974 Bacteria 7058875
305 2867320998 2867319477 Bacteria 7069771
306 2869051552 2869048445 Bacteria 6875584
307 2869067388 2869061728 Bacteria 7112407
308 2869075226 2869068681 Bacteria 7205615
309 2880489661 2880489317 Bacteria 7096270
310 2880496042 2880495981 Bacteria 7340502
311 2902583410 2902582711 Bacteria 6187705
312 2929232342 2929226422 Bacteria 7248583
313 2996227546 2996221748 Bacteria 6799777
314 649813968 649633069 Bacteria 6962533
315 8003836846 8003830390 Bacteria 6541657
316 8003877381 8003870546 Bacteria 7396674
317 8054612710 8054609563 Bacteria 5170090
318 8054732806 8054727385 Bacteria 7558670
319 8054739005 8054734606 Bacteria 6947278
320 Ga0070679_100046156
321 JGI24749J21850_1008050
322 JGI25406J46586_10034461
323 Ga0070658_10056045
324 Ga0070676_10038641
325 Ga0070690_100148357
326 Ga0070682_100091565
327 Ga0070682_100187768
328 Ga0068868_100080383
329 Ga0068868_100237435
330 Ga0070689_100003451
331 Ga0070689_100090541
332 Ga0070692_10083156
333 Ga0070668_100019914
334 Ga0070669_100102930
335 Ga0070669_100219377
336 Ga0070675_100475758
337 Ga0070674_100058647
338 Ga0070674_100174893
339 Ga0070688_100006614
340 Ga0070659_100316547
341 Ga0070667_100048552
342 Ga0070667_100116918
343 Ga0070711_100403694
344 Ga0070700_100052760
345 Ga0070700_100176736
346 Ga0070694_100059680
347 Ga0070663_100007163
348 Ga0070678_100078490
349 Ga0070679_100124259
350 Ga0070679_100316947
351 Ga0070684_100147690
352 Ga0070684_100442579
353 Ga0070686_100006316
354 Ga0070695_100010785
355 Ga0070696_100040024
356 Ga0070665_100085365
357 Ga0068855_100205504
358 Ga0070664_100200636
359 Ga0068857_100156657
360 Ga0068857_100204541
361 Ga0068856_100031199
362 Ga0068856_100129763
363 Ga0070702_100002501
364 Ga0070702_100093362
365 Ga0068852_100008773
366 Ga0068852_100384490
367 Ga0068864_100011260
368 Ga0068851_10047384
369 Ga0068870_10186744
370 Ga0068860_100001063
371 Ga0068860_100056946
372 Ga0081538_10038205
373 Ga0081539_10002457
374 Ga0081539_10061536
375 Ga0070717_10338139
376 Ga0075365_10015092
377 Ga0075365_10015293
378 Ga0075365_10323388
379 Ga0075368_10080419
380 Ga0075364_10006270
381 Ga0075364_10031057
382 Ga0075364_10083986
383 Ga0075364_10255941
384 Ga0075367_10021965
385 Ga0075370_10006065
386 Ga0075428_100001108
387 Ga0075428_100075236
388 Ga0075428_100190742
389 Ga0111539_10024766
390 Ga0111539_10198528
391 Ga0111539_10229880
392 Ga0111539_10358068
393 Ga0111539_10585980
394 Ga0105245_10017227
395 Ga0105245_10078460
396 Ga0105245_10558495
397 Ga0114129_10094004
398 Ga0114129_10201254
399 Ga0114129_10382001
400 Ga0105243_10052219
401 Ga0105243_10287422
402 Ga0105241_10159614
403 Ga0105242_10025362
404 Ga0105242_10111000
405 Ga0105248_10034371
406 Ga0105237_10222073
407 Ga0105237_10469007
408 Ga0105238_10059162
409 Ga0105238_10171742
410 Ga0105249_10011252
411 Ga0105249_10076227
412 Ga0105249_10133818
413 Ga0105239_10028934
414 Ga0105239_10057869
415 Ga0105246_10060616
416 Ga0157369_10011490
417 Ga0157369_10356408
418 Ga0163162_10651819
419 Ga0157372_10024599
420 Ga0157372_10129541
421 Ga0157372_10171799
422 Ga0157372_10255998
423 Ga0157375_10063555
424 Ga0157375_10567559
425 Ga0163163_10148966
426 Ga0163163_10337549
427 Ga0157380_10116494
428 Ga0157380_10547001
429 Ga0182008_10051948
430 Ga0157377_10030226
431 Ga0157377_10036161
432 Ga0157377_10086122
433 Ga0157379_10064933
434 Ga0157379_10114626
435 Ga0157379_10491793
436 Ga0157376_10665504
437 Ga0206353_11522617
438 Ga0213872_10046471
439 Ga0207642_10015120
440 Ga0207688_10013871
441 Ga0207688_10064082
442 Ga0207688_10091901
443 Ga0207645_10019049
444 Ga0207705_10047279
445 Ga0207654_10092806
446 Ga0207663_10355539
447 Ga0207657_10042841
448 Ga0207652_10124904
449 Ga0207650_10296361
450 Ga0207650_10609010
451 Ga0207659_10258363
452 Ga0207687_10007749
453 Ga0207687_10058023
454 Ga0207687_10392369
455 Ga0207664_10158601
456 Ga0207644_10466151
457 Ga0207690_10234393
458 Ga0207686_10025022
459 Ga0207709_10003115
460 Ga0207709_10027787
461 Ga0207709_10083953
462 Ga0207670_10004219
463 Ga0207670_10072113
464 Ga0207669_10037542
465 Ga0207704_10215514
466 Ga0207691_10046826
467 Ga0207691_10247513
468 Ga0207711_10016387
469 Ga0207689_10030998
470 Ga0207661_10267427
471 Ga0207679_10190767
472 Ga0207679_10254983
473 Ga0207651_10158625
474 Ga0207712_10003996
475 Ga0207712_10087833
476 Ga0207668_10025072
477 Ga0207640_10055793
478 Ga0207677_10047924
479 Ga0207639_10161635
480 Ga0207678_10018978
481 Ga0207708_10002767
482 Ga0207708_10006263
483 Ga0207702_10082081
484 Ga0207702_10350463
485 Ga0207648_10051450
486 Ga0207648_10102972
487 Ga0207648_10131473
488 Ga0207648_10417752
489 Ga0207676_10020383
490 Ga0207674_10287673
491 Ga0207674_10309010
492 Ga0207674_10508500
493 Ga0207675_100004097
494 Ga0207675_100041389
495 Ga0207675_100178947
496 Ga0207683_10016810
497 Ga0207683_10228701
498 Ga0207698_10290445
499 Ga0207698_10398717
500 Ga0265356_1000330
501 Ga0268266_10059245
502 Ga0268266_10131296
503 Ga0268264_10001069
504 Ga0268264_10200174
505 Ga0268264_10266595
506 Ga0307513_10000561
507 Ga0316579_10000474
508 Ga0307413_10025926
509 Ga0307410_10063836
510 Ga0307409_100059843
511 Ga0373931_0143304
512 Ga0395899_0160753
513 Ga0395905_0246630
514 Ga0436364_0975580
515 Ga0395901_0018315
516 Ga0400485_17869
517 Ga0400486_31407
518 Ga0436365_0116184
519 Ga0436360_0810703
520 Ga0436361_0990945
521 Ga0436362_1260908
522 Ga0451791_0866637
523 Ga0451837_1721254
524 Ga0451577_0125263
525 Ga0466965_0050930
526 Ga0466957_0203671
527 Ga0466960_0023041
528 Ga0466967_0007346
529 Ga0466967_0048889
530 Ga0466967_0271882
531 Ga0466967_0344509
532 Ga0466967_0707193
533 Ga0495641_0094830
534 Ga0496101_0049928
535 Ga0496101_0385506
536 Ga0496102_0006449
537 Ga0496102_0042421
538 Ga0496103_0078490
539 Ga0496104_0176523
540 Ga0496104_0238982
541 Ga0496104_0338302
542 Ga0496105_0176195
543 Ga0496105_0211895
544 Ga0496106_0006527
545 Ga0496106_0019900
546 Ga0496106_0228340
547 Ga0496107_0005613
548 Ga0496107_0034135
549 Ga0496108_0002999
550 Ga0496108_0067280
551 Ga0496108_0125382
552 Ga0496108_0296011
553 Ga0496109_0012166
554 Ga0496109_0034123
555 Ga0496109_0046087
556 Ga0496109_0143007
557 Ga0496109_0387136
558 Ga0496110_0019333
559 Ga0496110_0168902
560 Ga0496110_0243081
561 Ga0496110_0417818
562 Ga0496110_0504397
563 Ga0496111_0028823
564 Ga0496111_0045530
565 Ga0496112_0008226
566 Ga0496112_0464805
567 Ga0496113_0134641
568 Ga0496113_0164953
569 Ga0496114_0066733
570 Ga0496114_0069332
571 Ga0496114_0091388
572 Ga0496114_0104414
573 Ga0496114_0136321
574 Ga0496114_0340100
575 Ga0501032_0084669
576 Ga0501036_0064677
577 Ga0501036_0129006
578 Ga0501039_0117470
579 Ga0501041_0295602
580 Ga0501047_0000015
581 Ga0501048_0170878
582 Ga0501077_0276398
583 Ga0501079_0301991
584 Ga0501080_0400889
585 Ga0501045_0098016
586 nmdc:mga00v17_149067_c1
587 nmdc:mga00v17_247811_c1
588 nmdc:mga00v17_26003_c1
589 nmdc:mga00v17_39059_c1
590 nmdc:mga0yw44_127107_c1
591 nmdc:mga0yw44_21409_c1
592 nmdc:mga0yw44_36435_c1
593 nmdc:mga0yw44_4117_c1
594 nmdc:mga09592_132912_c1
595 nmdc:mga09592_84558_c1
596 nmdc:mga0qj67_102431_c1
597 nmdc:mga08y16_21544_c2
598 nmdc:mga08y16_243029_c1
599 Ga0500646_0001969
600 Ga0500604_0036214
601 Ga0501082_0325561
602 2501945143
603 2643889010
604 2643958065
605 2644228851
606 2644446161
607 2644457481
608 2644537257
609 2740166975
610 2772644184
611 2816504223
612 2831936317
613 2855676409
614 2855678669
615 2856864504
616 2857289300
617 2858855188
618 2858874049
619 2858888753
620 2858889027
621 2858897400
622 2867303512
623 2867316132
624 2867320998
625 2869051552
626 2869067388
627 2869075226
628 2880489661
629 2880496042
630 2902583410
631 2929232342
632 2996227546
633 649813968
634 8003836846
635 8003877381
636 8054612710
637 8054732806
638 8054739005

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02219

MTHFR

Methylenetetrahydrofolate reductase

45

330

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
7th5-assembly1.cif.gz_B thermus thermophilus methylenetetrahydrofolate reductase 0.9155 2 265
1v93-assembly1.cif.gz_A 5,10-methylenetetrahydrofolate reductase from thermus thermophilus hb8 0.9027 2 267
1b5t-assembly1.cif.gz_B escherichia coli methylenetetrahydrofolate reductase 0.9015 3 267
5ume-assembly1.cif.gz_D crystal structure of 5,10-methylenetetrahydrofolate reductase metf from haemophilus influenzae 0.8916 1 266
7th5-assembly1.cif.gz_B thermus thermophilus methylenetetrahydrofolate reductase 0.8896 2 265
ID Description Score Start End Superfamily
af_Q9WU20_42_335_3.20.20.220 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9154 3 261 3.20.20.220
af_Q75HE6_1_304_3.20.20.220 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9098 3 267 3.20.20.220
1v93A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9027 2 267 3.20.20.220
af_A0A1D6GER4_1_215_3.20.20.220 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8933 73 261 3.20.20.220
af_A4IC95_4_307_3.20.20.220 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.892 2 265 3.20.20.220
ID Description Score Start End GO Terms
AF-A0A7K0ZM08-F1-model_v4 Methylenetetrahydrofolate reductase 0.9916 168 267 GO:0004489
GO:0005829
GO:0009086
GO:0035999
GO:0071949
AF-A0A1J5NXD6-F1-model_v4 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.9883 176 264 GO:0004489
GO:0005829
GO:0009086
GO:0035999
GO:0071949
AF-A0A6G3Y007-F1-model_v4 Methylenetetrahydrofolate reductase 0.9846 178 264 GO:0004489
GO:0005829
GO:0009086
GO:0035999
GO:0071949
AF-A0A6I2ZF65-F1-model_v4 deleted 0.9821 156 264
AF-A0A3M1GA65-F1-model_v4 Methylenetetrahydrofolate reductase 0.9779 164 263 GO:0005829
GO:0009086
GO:0035999
GO:0071949
GO:0106312

Map