F404606

General Info

Members Datasets Scaffolds Average Seq Length
318 170 636 535

Family's Representative Sequence

Representative Sequence 3300013307|Ga0157372_10267932|Ga0157372_102679321
Length 555
Sequence MARIKDSSVEAVKAAADFVDVVSARTQLRKAGARYSGRCPFHDERTPSFSVNAVDKLYYCFGCGAKGDLITFVRETEGLDFAGAIEWLGDRFRVPVEYEESSPVEDARRKRRERLLAVLEQAATYYERTLWETEAGGLARDYLKGRGLSEDACRAFRLGLALGGNALARKALAKGFTEEELRAAGLQRQGRHDDYFQRRLLFPLADRQGKVLGFQARKLYEDDPLKAKYVNTPESELFHKGSLLYGLDKARAAIAREDRACVVEGNTDVIALRQAGYEPVVASMGTALTEAQLKELGRLSRRLWLAFDGDSAGETATLRGMELATRQGFDVKVVALPAGIDPADDPAGFQQRLAGAEPYLLYRVRIEIERGEDREATFRAVKALLEGAPDSPERQDAWRLANDKLGMTVQLRGASTARAAAPPSQRALDASTKLERNALAGALAHERLKPLLAELTEEHFYDPVHRRLRAHIASGEPLDEGAVGLLAELDARAVAEGIDDATGEELIWRLRERQLRRELQHADPSRTKELQETLQRLLEHVAARSSPRSISIRTR

Samples

Sample ID Description Type Environment
1 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
41 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
60 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
61 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
62 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
63 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
64 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
65 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
66 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
67 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
68 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
69 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
70 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
71 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
72 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
73 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
82 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
83 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
84 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
85 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
86 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
87 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
88 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
89 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
90 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
91 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
92 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
93 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
94 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
95 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
96 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
97 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
98 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
99 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
100 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
101 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
102 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
103 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
104 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
105 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
106 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
107 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
108 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
109 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
110 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
111 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
112 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
113 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
114 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
115 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
116 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
117 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
118 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
119 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
120 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
121 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
122 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
123 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
124 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
125 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
126 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
127 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
128 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
129 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
145 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
148 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
149 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
150 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
151 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
152 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
153 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
154 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
155 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
156 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
157 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
161 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
162 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
163 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
164 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
165 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
166 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
167 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
168 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
169 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
170 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.06
Metatranscriptomes 0.94
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.55
Rhizosphere 91.82
Stem 0
Stem Tuber 0
Unclassified 1.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157372_10267932 3300013307 Unclassified 1984
2 JGI25407J50210_10002278 3300003373 Bacteria 4504
3 Ga0070658_10052994 3300005327 Bacteria 3291
4 Ga0070658_10056358 3300005327 Bacteria 3193
5 Ga0070683_100002534 3300005329 Bacteria 14579
6 Ga0070683_100031506 3300005329 Bacteria 4822
7 Ga0070683_100149538 3300005329 Bacteria 2214
8 Ga0070680_100007599 3300005336 Bacteria 8268
9 Ga0070680_100121923 3300005336 Bacteria 2177
10 Ga0070660_100011474 3300005339 Bacteria 6298
11 Ga0070660_100032691 3300005339 Bacteria 3917
12 Ga0070660_100059823 3300005339 Bacteria 2955
13 Ga0070661_100018055 3300005344 Bacteria 5012
14 Ga0070661_100098002 3300005344 Bacteria 2177
15 Ga0070659_100008726 3300005366 Bacteria 7417
16 Ga0070714_100053582 3300005435 Bacteria 3444
17 Ga0070713_100048034 3300005436 Bacteria 3512
18 Ga0070711_100022483 3300005439 Bacteria 4088
19 Ga0070711_100115848 3300005439 Bacteria 1974
20 Ga0070705_100011040 3300005440 Bacteria 4543
21 Ga0070708_100025368 3300005445 Bacteria 5067
22 Ga0070678_100122714 3300005456 Unclassified 2051
23 Ga0070681_10001242 3300005458 Bacteria 22193
24 Ga0070681_10017938 3300005458 Bacteria 7075
25 Ga0070681_10025186 3300005458 Bacteria 5984
26 Ga0070681_10040916 3300005458 Bacteria 4643
27 Ga0070681_10109538 3300005458 Bacteria 2702
28 Ga0070698_100001355 3300005471 Bacteria 27231
29 Ga0070698_100017348 3300005471 Bacteria 7585
30 Ga0070698_100177927 3300005471 Bacteria 2066
31 Ga0070699_100142284 3300005518 Bacteria 2119
32 Ga0070679_100044714 3300005530 Bacteria 4412
33 Ga0070679_100055331 3300005530 Bacteria 3951
34 Ga0070679_100065344 3300005530 Bacteria 3626
35 Ga0070684_100003109 3300005535 Bacteria 12399
36 Ga0070684_100012323 3300005535 Bacteria 6848
37 Ga0070684_100033031 3300005535 Bacteria 4415
38 Ga0070684_100051550 3300005535 Bacteria 3575
39 Ga0068853_100087959 3300005539 Bacteria 2727
40 Ga0070696_100061512 3300005546 Bacteria 2627
41 Ga0070665_100011283 3300005548 Bacteria 9036
42 Ga0068855_100018942 3300005563 Bacteria 8275
43 Ga0068855_100024407 3300005563 Bacteria 7233
44 Ga0068855_100217640 3300005563 Bacteria 2143
45 Ga0068857_100003329 3300005577 Bacteria 13368
46 Ga0068857_100087196 3300005577 Bacteria 2791
47 Ga0068856_100055189 3300005614 Bacteria 3921
48 Ga0068856_100116569 3300005614 Bacteria 2671
49 Ga0081455_10006953 3300005937 Bacteria 12031
50 Ga0081455_10016944 3300005937 Bacteria 7003
51 Ga0081538_10001401 3300005981 Bacteria 24745
52 Ga0081538_10004499 3300005981 Bacteria 12831
53 Ga0081538_10037057 3300005981 Bacteria 3172
54 Ga0075428_100211376 3300006844 Bacteria 2096
55 Ga0075428_100254724 3300006844 Bacteria 1891
56 Ga0075430_100033589 3300006846 Bacteria 4354
57 Ga0075431_100062696 3300006847 Bacteria 3836
58 Ga0075434_100043628 3300006871 Bacteria 4448
59 Ga0075429_100028023 3300006880 Bacteria 4888
60 Ga0075435_100091569 3300007076 Bacteria 2510
61 Ga0105245_10024780 3300009098 Bacteria 5272
62 Ga0114129_10039847 3300009147 Bacteria 6627
63 Ga0114129_10191317 3300009147 Bacteria 2778
64 Ga0114129_10271998 3300009147 Bacteria 2266
65 Ga0105243_10045504 3300009148 Bacteria 3449
66 Ga0105238_10028455 3300009551 Bacteria 5693
67 Ga0105238_10075941 3300009551 Bacteria 3352
68 Ga0157370_10019054 3300013104 Bacteria 6898
69 Ga0157370_10034207 3300013104 Bacteria 4951
70 Ga0157370_10076695 3300013104 Bacteria 3148
71 Ga0157370_10156775 3300013104 Bacteria 2118
72 Ga0157369_10002928 3300013105 Bacteria 20413
73 Ga0157369_10010883 3300013105 Bacteria 10362
74 Ga0157369_10019021 3300013105 Bacteria 7691
75 Ga0157369_10142047 3300013105 Bacteria 2540
76 Ga0157378_10057636 3300013297 Bacteria 3463
77 Ga0157372_10119487 3300013307 Bacteria 3025
78 Ga0206353_10345266 3300020082 Bacteria 4150
79 Ga0206353_10437690 3300020082 Bacteria 5428
80 Ga0206353_11046688 3300020082 Bacteria 3152
81 Ga0207705_10028919 3300025909 Bacteria 3951
82 Ga0207707_10003875 3300025912 Bacteria 13267
83 Ga0207707_10066691 3300025912 Bacteria 3134
84 Ga0207695_10107628 3300025913 Bacteria 2773
85 Ga0207660_10110072 3300025917 Unclassified 2071
86 Ga0207657_10002710 3300025919 Bacteria 19085
87 Ga0207657_10016631 3300025919 Bacteria 7087
88 Ga0207657_10024850 3300025919 Bacteria 5538
89 Ga0207657_10082591 3300025919 Bacteria 2697
90 Ga0207657_10087611 3300025919 Bacteria 2604
91 Ga0207649_10052501 3300025920 Bacteria 2529
92 Ga0207652_10012776 3300025921 Bacteria 6788
93 Ga0207664_10047073 3300025929 Bacteria 3387
94 Ga0207644_10083663 3300025931 Bacteria 2364
95 Ga0207661_10008561 3300025944 Bacteria 7313
96 Ga0207661_10020701 3300025944 Bacteria 4921
97 Ga0207651_10060208 3300025960 Bacteria 2635
98 Ga0207639_10075893 3300026041 Bacteria 2645
99 Ga0207702_10124524 3300026078 Bacteria 2312
100 Ga0207674_10025919 3300026116 Bacteria 6240
101 Ga0207674_10039549 3300026116 Bacteria 4888
102 Ga0207674_10047044 3300026116 Bacteria 4426
103 Ga0207674_10118378 3300026116 Bacteria 2619
104 Ga0207698_10073672 3300026142 Bacteria 2720
105 Ga0265318_10003898 3300028577 Bacteria 7355
106 Ga0265338_10005979 3300028800 Bacteria 15653
107 Ga0265338_10023271 3300028800 Bacteria 6375
108 Ga0265338_10079381 3300028800 Bacteria 2762
109 Ga0265338_10084676 3300028800 Bacteria 2646
110 Ga0265325_10015834 3300031241 Bacteria 4229
111 Ga0265329_10007822 3300031242 Bacteria 4101
112 Ga0265340_10029302 3300031247 Bacteria 2765
113 Ga0265331_10023825 3300031250 Bacteria 3104
114 Ga0265327_10011799 3300031251 Bacteria 5973
115 Ga0265327_10016224 3300031251 Bacteria 4748
116 Ga0265327_10019211 3300031251 Bacteria 4209
117 Ga0265316_10010795 3300031344 Bacteria 8298
118 Ga0265316_10051148 3300031344 Bacteria 3246
119 Ga0307408_100162824 3300031548 Unclassified 1773
120 Ga0265313_10009467 3300031595 Bacteria 6322
121 Ga0265314_10014152 3300031711 Bacteria 6401
122 Ga0265342_10023217 3300031712 Bacteria 3930
123 Ga0307416_100042706 3300032002 Bacteria 3542
124 Ga0373943_0001026 3300035170 Bacteria 12392
125 Ga0373943_0001158 3300035170 Bacteria 11773
126 Ga0373946_0012361 3300035171 Bacteria 3194
127 Ga0373927_0016622 3300035695 Bacteria 4854
128 Ga0373947_0001205 3300035725 Bacteria 15889
129 Ga0373947_0006697 3300035725 Bacteria 6686
130 Ga0373937_0007079 3300036401 Bacteria 9689
131 Ga0373937_0035616 3300036401 Bacteria 4531
132 Ga0373925_0002327 3300037068 Bacteria 15282
133 Ga0395899_0002521 3300037312 Bacteria 14832
134 Ga0395899_0015950 3300037312 Bacteria 5729
135 Ga0395899_0016456 3300037312 Bacteria 5638
136 Ga0395899_0016826 3300037312 Bacteria 5576
137 Ga0395899_0023978 3300037312 Bacteria 4616
138 Ga0395900_0008873 3300037418 Bacteria 10324
139 Ga0395900_0013275 3300037418 Bacteria 8421
140 Ga0395900_0018146 3300037418 Bacteria 7179
141 Ga0395900_0051464 3300037418 Bacteria 4242
142 Ga0395900_0074876 3300037418 Bacteria 3480
143 Ga0395900_0089948 3300037418 Bacteria 3155
144 Ga0395900_0154293 3300037418 Bacteria 2346
145 Ga0395898_0005827 3300037466 Bacteria 13258
146 Ga0395898_0026496 3300037466 Bacteria 5832
147 Ga0395898_0040022 3300037466 Bacteria 4637
148 Ga0395898_0042853 3300037466 Bacteria 4463
149 Ga0395898_0056556 3300037466 Bacteria 3823
150 Ga0395898_0058087 3300037466 Bacteria 3767
151 Ga0395898_0066328 3300037466 Bacteria 3497
152 Ga0395898_0113632 3300037466 Bacteria 2595
153 Ga0395905_0005756 3300037471 Bacteria 12597
154 Ga0395905_0021234 3300037471 Bacteria 6144
155 Ga0395905_0036275 3300037471 Bacteria 4630
156 Ga0395905_0039819 3300037471 Bacteria 4410
157 Ga0395905_0042746 3300037471 Bacteria 4251
158 Ga0395901_0010440 3300038443 Bacteria 9408
159 Ga0395901_0021230 3300038443 Bacteria 6651
160 Ga0395901_0025869 3300038443 Bacteria 6027
161 Ga0395901_0032106 3300038443 Bacteria 5418
162 Ga0395901_0032408 3300038443 Bacteria 5391
163 Ga0395901_0036148 3300038443 Bacteria 5103
164 Ga0395901_0039292 3300038443 Bacteria 4897
165 Ga0395901_0063637 3300038443 Bacteria 3839
166 Ga0395901_0076870 3300038443 Bacteria 3483
167 Ga0395901_0081770 3300038443 Bacteria 3374
168 Ga0395901_0087424 3300038443 Bacteria 3259
169 Ga0395901_0100210 3300038443 Bacteria 3038
170 Ga0395901_0121402 3300038443 Bacteria 2746
171 Ga0395901_0121825 3300038443 Bacteria 2741
172 Ga0395901_0197731 3300038443 Bacteria 2108
173 Ga0436365_0741333 3300039437 Bacteria 3217
174 Ga0436365_1261930 3300039437 Bacteria 1986
175 Ga0439446_0001428 3300042156 Bacteria 5440
176 Ga0439446_0027618 3300042156 Bacteria 1629
177 Ga0439434_0020019 3300042435 Bacteria 2008
178 Ga0466966_0012902 3300044684 Bacteria 5533
179 Ga0466966_0014917 3300044684 Bacteria 5142
180 Ga0466961_0005407 3300044693 Bacteria 8045
181 Ga0466961_0007765 3300044693 Bacteria 6828
182 Ga0466963_0002613 3300044694 Bacteria 10110
183 Ga0466963_0003103 3300044694 Bacteria 9422
184 Ga0466963_0029858 3300044694 Bacteria 3513
185 Ga0466963_0053604 3300044694 Bacteria 2678
186 Ga0466963_0066032 3300044694 Bacteria 2426
187 Ga0466971_0000165 3300044719 Bacteria 24707
188 Ga0466968_0033762 3300044735 Bacteria 2132
189 Ga0466957_0001076 3300044842 Bacteria 14082
190 Ga0466957_0026267 3300044842 Bacteria 3454
191 Ga0466959_0008120 3300045049 Bacteria 7406
192 Ga0466959_0049955 3300045049 Bacteria 3072
193 Ga0466958_0000198 3300045836 Bacteria 22183
194 Ga0466967_0004296 3300045976 Bacteria 9585
195 Ga0466967_0008335 3300045976 Bacteria 7584
196 Ga0466967_0010886 3300045976 Bacteria 6852
197 Ga0466967_0017330 3300045976 Bacteria 5714
198 Ga0466967_0051122 3300045976 Bacteria 3621
199 Ga0466967_0067089 3300045976 Bacteria 3199
200 Ga0466967_0118676 3300045976 Bacteria 2440
201 Ga0466967_0259965 3300045976 Bacteria 1661
202 Ga0495592_0038071 3300046454 Bacteria 3620
203 Ga0495629_0000944 3300046459 Bacteria 23386
204 Ga0495651_0079392 3300046462 Bacteria 2480
205 Ga0495653_0040634 3300046463 Bacteria 3634
206 Ga0495582_0012357 3300046473 Bacteria 4703
207 Ga0495582_0014947 3300046473 Bacteria 4267
208 Ga0495608_0015205 3300046511 Bacteria 5340
209 Ga0495628_0090812 3300046516 Bacteria 2364
210 Ga0495630_0010735 3300046517 Bacteria 6614
211 Ga0495630_0029233 3300046517 Bacteria 4096
212 Ga0495630_0095832 3300046517 Bacteria 2243
213 Ga0495666_0023968 3300046526 Bacteria 3018
214 Ga0495652_0076318 3300046529 Bacteria 2780
215 Ga0495665_0014387 3300046531 Bacteria 4268
216 Ga0495665_0045771 3300046531 Bacteria 2324
217 Ga0495640_0001188 3300046533 Bacteria 20367
218 Ga0495587_0051755 3300046536 Bacteria 2426
219 Ga0495645_0069742 3300046543 Bacteria 2537
220 Ga0495667_0015295 3300046559 Bacteria 5182
221 Ga0495634_0032119 3300046642 Bacteria 3612
222 Ga0495635_0035822 3300046663 Bacteria 3441
223 Ga0495635_0044671 3300046663 Bacteria 3056
224 Ga0495659_0048898 3300046664 Bacteria 1534
225 Ga0495658_0001012 3300046683 Bacteria 14837
226 Ga0495624_0053085 3300046690 Bacteria 2560
227 Ga0495670_0063005 3300046691 Bacteria 1867
228 Ga0495581_0000328 3300047315 Bacteria 23476
229 Ga0495581_0048250 3300047315 Bacteria 2459
230 Ga0495674_0001467 3300047319 Bacteria 23112
231 Ga0495680_0002404 3300047322 Bacteria 19198
232 Ga0495680_0002570 3300047322 Bacteria 18505
233 Ga0495680_0040279 3300047322 Bacteria 3723
234 Ga0495680_0062439 3300047322 Bacteria 2864
235 Ga0495684_0003586 3300047471 Bacteria 12108
236 Ga0495684_0038959 3300047471 Bacteria 3643
237 Ga0495593_0003283 3300047673 Bacteria 9699
238 Ga0495593_0045405 3300047673 Bacteria 2345
239 Ga0495602_0089995 3300048088 Bacteria 2551
240 Ga0496100_0019021 3300048903 Bacteria 4089
241 Ga0496100_0085743 3300048903 Bacteria 2138
242 Ga0496100_0141555 3300048903 Bacteria 1705
243 Ga0496101_0001361 3300048904 Bacteria 14635
244 Ga0496104_0002527 3300048907 Bacteria 15765
245 Ga0496105_0003550 3300048908 Bacteria 11565
246 Ga0496106_0003504 3300048909 Bacteria 11694
247 Ga0496107_0003591 3300048910 Bacteria 10402
248 Ga0496107_0165981 3300048910 Bacteria 1637
249 Ga0496108_0021699 3300048911 Bacteria 5279
250 Ga0496109_0002570 3300048912 Bacteria 15204
251 Ga0496109_0014725 3300048912 Bacteria 6805
252 Ga0496109_0047862 3300048912 Bacteria 3889
253 Ga0496110_0006814 3300048913 Bacteria 9086
254 Ga0496110_0042279 3300048913 Bacteria 3978
255 Ga0496110_0141836 3300048913 Bacteria 2172
256 Ga0496111_0004379 3300048914 Bacteria 8918
257 Ga0496111_0044234 3300048914 Bacteria 3201
258 Ga0496112_0002534 3300048915 Bacteria 14751
259 Ga0496112_0005069 3300048915 Bacteria 11319
260 Ga0496112_0007263 3300048915 Bacteria 9820
261 Ga0496112_0086716 3300048915 Bacteria 3097
262 Ga0496114_0002399 3300048917 Bacteria 14271
263 Ga0496115_0069755 3300048918 Bacteria 2848
264 Ga0501031_0001514 3300049568 Bacteria 14460
265 Ga0501031_0058536 3300049568 Bacteria 2511
266 Ga0501033_0073056 3300049570 Bacteria 2518
267 Ga0501034_0062082 3300049571 Bacteria 3752
268 Ga0501036_0013925 3300049572 Bacteria 6688
269 Ga0501038_0001674 3300049574 Bacteria 20538
270 Ga0501038_0049484 3300049574 Bacteria 3634
271 Ga0501039_0033743 3300049575 Bacteria 3948
272 Ga0501040_0002170 3300049576 Bacteria 12660
273 Ga0501041_0004027 3300049577 Bacteria 8484
274 Ga0501042_0005566 3300049578 Bacteria 8121
275 Ga0501046_0009629 3300049580 Bacteria 8331
276 Ga0501046_0075283 3300049580 Bacteria 2617
277 Ga0501047_0069476 3300049581 Bacteria 3392
278 Ga0501067_0001025 3300049583 Bacteria 15041
279 Ga0501067_0001043 3300049583 Bacteria 14898
280 Ga0501067_0006754 3300049583 Bacteria 6363
281 Ga0501069_0013273 3300049585 Bacteria 4390
282 Ga0501069_0071087 3300049585 Bacteria 1950
283 Ga0501070_0000402 3300049586 Bacteria 39380
284 Ga0501070_0033335 3300049586 Bacteria 4310
285 Ga0501070_0065644 3300049586 Bacteria 3005
286 Ga0501071_0016116 3300049587 Bacteria 5137
287 Ga0501072_0032637 3300049588 Bacteria 4078
288 Ga0501072_0077913 3300049588 Bacteria 2624
289 Ga0501073_0021291 3300049589 Bacteria 4675
290 Ga0501074_0118363 3300049590 Bacteria 1895
291 Ga0501075_0021929 3300049591 Bacteria 4661
292 Ga0501075_0038671 3300049591 Bacteria 3567
293 Ga0501076_0006773 3300049592 Bacteria 8314
294 Ga0501077_0001520 3300049593 Bacteria 13977
295 Ga0501077_0014270 3300049593 Bacteria 4990
296 Ga0501077_0022138 3300049593 Bacteria 4025
297 Ga0501079_0014272 3300049741 Bacteria 6056
298 Ga0501080_0038589 3300049742 Bacteria 4458
299 Ga0501081_0026792 3300049743 Bacteria 3889
300 Ga0501081_0038581 3300049743 Bacteria 3264
301 Ga0501083_0006260 3300049744 Bacteria 8446
302 Ga0501035_0005511 3300049822 Bacteria 11961
303 Ga0501044_0045058 3300049823 Bacteria 4574
304 Ga0501045_0122290 3300049824 Bacteria 1932
305 nmdc:mga05p37_120488_c1 3300050507 Bacteria 3223
306 nmdc:mga05p37_264367_c1 3300050507 Bacteria 2057
307 nmdc:mga05p37_87324_c1 3300050507 Bacteria 3844
308 nmdc:mga09592_101149_c1 3300050508 Bacteria 2469
309 nmdc:mga06r32_70054_c1 3300050510 Bacteria 3391
310 nmdc:mga08y16_92653_c1 3300050511 Bacteria 3149
311 nmdc:mga08x19_132162_c1 3300050514 Bacteria 1679
312 Ga0495619_0066093 3300053085 Bacteria 2413
313 Ga0501084_0014075 3300054114 Bacteria 6624
314 Ga0590075_003052 3300059424 Bacteria 3979
315 Ga0501082_0004683 3300060353 Bacteria 11930
316 Ga0501082_0006577 3300060353 Bacteria 10060
317 Ga0501082_0159699 3300060353 Bacteria 1959
318 Ga0466962_0000618 3300061719 Bacteria 15773
319 Ga0157372_10267932
320 JGI25407J50210_10002278
321 Ga0070658_10052994
322 Ga0070658_10056358
323 Ga0070683_100002534
324 Ga0070683_100031506
325 Ga0070683_100149538
326 Ga0070680_100007599
327 Ga0070680_100121923
328 Ga0070660_100011474
329 Ga0070660_100032691
330 Ga0070660_100059823
331 Ga0070661_100018055
332 Ga0070661_100098002
333 Ga0070659_100008726
334 Ga0070714_100053582
335 Ga0070713_100048034
336 Ga0070711_100022483
337 Ga0070711_100115848
338 Ga0070705_100011040
339 Ga0070708_100025368
340 Ga0070678_100122714
341 Ga0070681_10001242
342 Ga0070681_10017938
343 Ga0070681_10025186
344 Ga0070681_10040916
345 Ga0070681_10109538
346 Ga0070698_100001355
347 Ga0070698_100017348
348 Ga0070698_100177927
349 Ga0070699_100142284
350 Ga0070679_100044714
351 Ga0070679_100055331
352 Ga0070679_100065344
353 Ga0070684_100003109
354 Ga0070684_100012323
355 Ga0070684_100033031
356 Ga0070684_100051550
357 Ga0068853_100087959
358 Ga0070696_100061512
359 Ga0070665_100011283
360 Ga0068855_100018942
361 Ga0068855_100024407
362 Ga0068855_100217640
363 Ga0068857_100003329
364 Ga0068857_100087196
365 Ga0068856_100055189
366 Ga0068856_100116569
367 Ga0081455_10006953
368 Ga0081455_10016944
369 Ga0081538_10001401
370 Ga0081538_10004499
371 Ga0081538_10037057
372 Ga0075428_100211376
373 Ga0075428_100254724
374 Ga0075430_100033589
375 Ga0075431_100062696
376 Ga0075434_100043628
377 Ga0075429_100028023
378 Ga0075435_100091569
379 Ga0105245_10024780
380 Ga0114129_10039847
381 Ga0114129_10191317
382 Ga0114129_10271998
383 Ga0105243_10045504
384 Ga0105238_10028455
385 Ga0105238_10075941
386 Ga0157370_10019054
387 Ga0157370_10034207
388 Ga0157370_10076695
389 Ga0157370_10156775
390 Ga0157369_10002928
391 Ga0157369_10010883
392 Ga0157369_10019021
393 Ga0157369_10142047
394 Ga0157378_10057636
395 Ga0157372_10119487
396 Ga0206353_10345266
397 Ga0206353_10437690
398 Ga0206353_11046688
399 Ga0207705_10028919
400 Ga0207707_10003875
401 Ga0207707_10066691
402 Ga0207695_10107628
403 Ga0207660_10110072
404 Ga0207657_10002710
405 Ga0207657_10016631
406 Ga0207657_10024850
407 Ga0207657_10082591
408 Ga0207657_10087611
409 Ga0207649_10052501
410 Ga0207652_10012776
411 Ga0207664_10047073
412 Ga0207644_10083663
413 Ga0207661_10008561
414 Ga0207661_10020701
415 Ga0207651_10060208
416 Ga0207639_10075893
417 Ga0207702_10124524
418 Ga0207674_10025919
419 Ga0207674_10039549
420 Ga0207674_10047044
421 Ga0207674_10118378
422 Ga0207698_10073672
423 Ga0265318_10003898
424 Ga0265338_10005979
425 Ga0265338_10023271
426 Ga0265338_10079381
427 Ga0265338_10084676
428 Ga0265325_10015834
429 Ga0265329_10007822
430 Ga0265340_10029302
431 Ga0265331_10023825
432 Ga0265327_10011799
433 Ga0265327_10016224
434 Ga0265327_10019211
435 Ga0265316_10010795
436 Ga0265316_10051148
437 Ga0307408_100162824
438 Ga0265313_10009467
439 Ga0265314_10014152
440 Ga0265342_10023217
441 Ga0307416_100042706
442 Ga0373943_0001026
443 Ga0373943_0001158
444 Ga0373946_0012361
445 Ga0373927_0016622
446 Ga0373947_0001205
447 Ga0373947_0006697
448 Ga0373937_0007079
449 Ga0373937_0035616
450 Ga0373925_0002327
451 Ga0395899_0002521
452 Ga0395899_0015950
453 Ga0395899_0016456
454 Ga0395899_0016826
455 Ga0395899_0023978
456 Ga0395900_0008873
457 Ga0395900_0013275
458 Ga0395900_0018146
459 Ga0395900_0051464
460 Ga0395900_0074876
461 Ga0395900_0089948
462 Ga0395900_0154293
463 Ga0395898_0005827
464 Ga0395898_0026496
465 Ga0395898_0040022
466 Ga0395898_0042853
467 Ga0395898_0056556
468 Ga0395898_0058087
469 Ga0395898_0066328
470 Ga0395898_0113632
471 Ga0395905_0005756
472 Ga0395905_0021234
473 Ga0395905_0036275
474 Ga0395905_0039819
475 Ga0395905_0042746
476 Ga0395901_0010440
477 Ga0395901_0021230
478 Ga0395901_0025869
479 Ga0395901_0032106
480 Ga0395901_0032408
481 Ga0395901_0036148
482 Ga0395901_0039292
483 Ga0395901_0063637
484 Ga0395901_0076870
485 Ga0395901_0081770
486 Ga0395901_0087424
487 Ga0395901_0100210
488 Ga0395901_0121402
489 Ga0395901_0121825
490 Ga0395901_0197731
491 Ga0436365_0741333
492 Ga0436365_1261930
493 Ga0439446_0001428
494 Ga0439446_0027618
495 Ga0439434_0020019
496 Ga0466966_0012902
497 Ga0466966_0014917
498 Ga0466961_0005407
499 Ga0466961_0007765
500 Ga0466963_0002613
501 Ga0466963_0003103
502 Ga0466963_0029858
503 Ga0466963_0053604
504 Ga0466963_0066032
505 Ga0466971_0000165
506 Ga0466968_0033762
507 Ga0466957_0001076
508 Ga0466957_0026267
509 Ga0466959_0008120
510 Ga0466959_0049955
511 Ga0466958_0000198
512 Ga0466967_0004296
513 Ga0466967_0008335
514 Ga0466967_0010886
515 Ga0466967_0017330
516 Ga0466967_0051122
517 Ga0466967_0067089
518 Ga0466967_0118676
519 Ga0466967_0259965
520 Ga0495592_0038071
521 Ga0495629_0000944
522 Ga0495651_0079392
523 Ga0495653_0040634
524 Ga0495582_0012357
525 Ga0495582_0014947
526 Ga0495608_0015205
527 Ga0495628_0090812
528 Ga0495630_0010735
529 Ga0495630_0029233
530 Ga0495630_0095832
531 Ga0495666_0023968
532 Ga0495652_0076318
533 Ga0495665_0014387
534 Ga0495665_0045771
535 Ga0495640_0001188
536 Ga0495587_0051755
537 Ga0495645_0069742
538 Ga0495667_0015295
539 Ga0495634_0032119
540 Ga0495635_0035822
541 Ga0495635_0044671
542 Ga0495659_0048898
543 Ga0495658_0001012
544 Ga0495624_0053085
545 Ga0495670_0063005
546 Ga0495581_0000328
547 Ga0495581_0048250
548 Ga0495674_0001467
549 Ga0495680_0002404
550 Ga0495680_0002570
551 Ga0495680_0040279
552 Ga0495680_0062439
553 Ga0495684_0003586
554 Ga0495684_0038959
555 Ga0495593_0003283
556 Ga0495593_0045405
557 Ga0495602_0089995
558 Ga0496100_0019021
559 Ga0496100_0085743
560 Ga0496100_0141555
561 Ga0496101_0001361
562 Ga0496104_0002527
563 Ga0496105_0003550
564 Ga0496106_0003504
565 Ga0496107_0003591
566 Ga0496107_0165981
567 Ga0496108_0021699
568 Ga0496109_0002570
569 Ga0496109_0014725
570 Ga0496109_0047862
571 Ga0496110_0006814
572 Ga0496110_0042279
573 Ga0496110_0141836
574 Ga0496111_0004379
575 Ga0496111_0044234
576 Ga0496112_0002534
577 Ga0496112_0005069
578 Ga0496112_0007263
579 Ga0496112_0086716
580 Ga0496114_0002399
581 Ga0496115_0069755
582 Ga0501031_0001514
583 Ga0501031_0058536
584 Ga0501033_0073056
585 Ga0501034_0062082
586 Ga0501036_0013925
587 Ga0501038_0001674
588 Ga0501038_0049484
589 Ga0501039_0033743
590 Ga0501040_0002170
591 Ga0501041_0004027
592 Ga0501042_0005566
593 Ga0501046_0009629
594 Ga0501046_0075283
595 Ga0501047_0069476
596 Ga0501067_0001025
597 Ga0501067_0001043
598 Ga0501067_0006754
599 Ga0501069_0013273
600 Ga0501069_0071087
601 Ga0501070_0000402
602 Ga0501070_0033335
603 Ga0501070_0065644
604 Ga0501071_0016116
605 Ga0501072_0032637
606 Ga0501072_0077913
607 Ga0501073_0021291
608 Ga0501074_0118363
609 Ga0501075_0021929
610 Ga0501075_0038671
611 Ga0501076_0006773
612 Ga0501077_0001520
613 Ga0501077_0014270
614 Ga0501077_0022138
615 Ga0501079_0014272
616 Ga0501080_0038589
617 Ga0501081_0026792
618 Ga0501081_0038581
619 Ga0501083_0006260
620 Ga0501035_0005511
621 Ga0501044_0045058
622 Ga0501045_0122290
623 nmdc:mga05p37_120488_c1
624 nmdc:mga05p37_264367_c1
625 nmdc:mga05p37_87324_c1
626 nmdc:mga09592_101149_c1
627 nmdc:mga06r32_70054_c1
628 nmdc:mga08y16_92653_c1
629 nmdc:mga08x19_132162_c1
630 Ga0495619_0066093
631 Ga0501084_0014075
632 Ga0590075_003052
633 Ga0501082_0004683
634 Ga0501082_0006577
635 Ga0501082_0159699
636 Ga0466962_0000618

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13155

Toprim_2

Toprim-like

261

346

0.98

PF01807

zf-CHC2

CHC2 zinc finger

4

101

0.96

PF01751

Toprim

Toprim domain

259

336

0.95

PF13662

Toprim_4

Toprim domain

258

335

0.92

PF13362

Toprim_3

Toprim domain

259

349

0.89

PF08275

DNAG_N

DNA primase catalytic core, N-terminal domain

125

251

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1d0q-assembly1.cif.gz_B structure of the zinc-binding domain of bacillus stearothermophilus dna primase 0.945 4 95
4ee1-assembly1.cif.gz_A the structure of the s. aureus dnag rna polymerase domain bound to ctp and manganese 0.9017 114 406
5w33-assembly1.cif.gz_A crystal structure of the rna polymerase domain (rpd) of mycobacterium tuberculosis primase dnag 0.8949 112 401
4e2k-assembly1.cif.gz_A the structure of the s. aureus dnag rna polymerase domain 0.8921 114 406
5guj-assembly1.cif.gz_A crystal structure of the bacillus subtilis dnag rna polymerase domain, natural degradation of full length dnag 0.8811 111 406
ID Description Score Start End Superfamily
af_P9WNW1_1_101_3.90.580.10 Alpha Beta;Alpha-Beta Complex;DNA Primase; Chain A;Zinc finger, CHC2-type domain 0.9746 1 99 3.90.580.10
af_P9WNW1_1_101_3.90.580.10 Alpha Beta;Alpha-Beta Complex;DNA Primase; Chain A;Zinc finger, CHC2-type domain 0.9465 1 99 3.90.580.10
5w33A01 Alpha Beta;Alpha-Beta Complex;DNA primase DNAg catalytic core, N-terminal domain;DNA primase, catalytic core, N-terminal domain 0.929 112 237 3.90.980.10
5gujA02 Alpha Beta;3-Layer(aba) Sandwich;Dna Topoisomerase Vi A Subunit; Chain: A, domain 2; 0.9184 239 354 3.40.1360.10
5gujA01 Alpha Beta;Alpha-Beta Complex;DNA primase DNAg catalytic core, N-terminal domain;DNA primase, catalytic core, N-terminal domain 0.9135 111 237 3.90.980.10
ID Description Score Start End GO Terms
AF-W3Y5L9-F1-model_v4 deleted 0.9635 5 95
AF-A0A2M7EKP9-F1-model_v4 DNA primase 0.9595 192 298 GO:0003896
GO:0005737
AF-A0A831Y4Q6-F1-model_v4 Zinc finger CHC2-type domain-containing protein 0.9582 1 89 GO:0003677
GO:0003896
GO:0005737
GO:0008270
AF-A0A3B8HJB5-F1-model_v4 Zinc finger CHC2-type domain-containing protein 0.9534 5 100 GO:0003677
GO:0003896
GO:0005737
GO:0008270
AF-A0A3D5UVF1-F1-model_v4 DNA primase 0.9513 9 87 GO:0003677
GO:0003896
GO:0005737
GO:0008270

Map