F404389

General Info

Members Datasets Scaffolds Average Seq Length
317 287 139 292

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2924207177|2924211634
Length 351
Sequence IAGLIDVFADVPLTGNPLAVVQDADGLTDDQMRRIAGEFNQAETTFLMRSTRADWKLRSFTASGAEVFGAGHNALGAWLWLAENGDLGSLTAARTFQQEIGRDVLPIELESVGGRIHGRMRQVPLRLSDPLDDVAPLADALGLDPRDILPEPPARPADTGATHLMVRVLNVDSVDRALPVADKLLAVLEKTPAEGCYIYALDADAPDTAYARFFNPSVGLWEDAATGTAAGPLAAYLAATGNLTNNELVIEQGTKMGRRSILRIRLAPLPELSGAGIVVVKGVIRLDQQALGLLLGLNGGRGRGFRSHIQQHCPSSIDLRQIQADRCASHGSTILGRPRRVCQEASATRRY

Samples

Sample ID Description Type Environment
1 2510065057 Sinorhizobium meliloti WSM1022 Isolate Nodule
2 2511231052 Sinorhizobium meliloti AK58 Isolate Nodule
3 2513237086 Sinorhizobium meliloti MVII-I Isolate Nodule
4 2513237091 Sinorhizobium meliloti RRI128 Isolate Nodule
5 2513237140 Sinorhizobium meliloti GVPV12 Isolate Nodule
6 2515154107 Sinorhizobium meliloti 4H41 Isolate Nodule
7 2516653046 Sinorhizobium meliloti BO21CC Isolate Nodule
8 2524023207 Ensifer sp. USDA 6670 Isolate Nodule
9 2551306084 Sinorhizobium meliloti 5A14 Isolate Nodule
10 2551306085 Sinorhizobium meliloti AE608H Isolate Nodule
11 2551306086 Sinorhizobium meliloti AK11 Isolate Nodule
12 2551306087 Sinorhizobium meliloti A0643DD Isolate Nodule
13 2551306089 Sinorhizobium meliloti 1A42 Isolate Nodule
14 2551306090 Sinorhizobium meliloti A0641M Isolate Nodule
15 2551306091 Sinorhizobium meliloti C0431A Isolate Nodule
16 2551306092 Sinorhizobium meliloti AK75 Isolate Nodule
17 2551306093 Sinorhizobium meliloti C0438LL Isolate Nodule
18 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
19 2643221591 Devosia sp. Root685 Isolate Unclassified
20 2643221640 Caulobacter sp. Root342 Isolate Unclassified
21 2643221642 Caulobacter sp. Root343 Isolate Unclassified
22 2738541294 Pseudomonas sp. GV087 Isolate Unclassified
23 2738541309 Pseudomonas sp. GV047 Isolate Unclassified
24 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
25 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
26 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
27 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
28 2855825444 Sinorhizobium meliloti CXM1-105 Isolate Nodule
29 2855839649 Sinorhizobium meliloti AK555 Isolate Unclassified
30 2858800743 Sinorhizobium meliloti AK170 Isolate Unclassified
31 2882632389 Mesorhizobium waimense ICMP19557 Isolate Unclassified
32 2915986958 Sinorhizobium meliloti USDA1659 Isolate Nodule
33 2915993759 Sinorhizobium meliloti USDA1336 Isolate Nodule
34 2916000859 Sinorhizobium meliloti USDA1562 Isolate Nodule
35 2916007675 Sinorhizobium meliloti USDA1289 Isolate Nodule
36 2916014648 Sinorhizobium meliloti USDA1583 Isolate Nodule
37 2916021584 Sinorhizobium meliloti USDA1550 Isolate Nodule
38 2916028427 Sinorhizobium meliloti USDA1613 Isolate Nodule
39 2916035215 Sinorhizobium meliloti 3011 Isolate Nodule
40 2916041962 Sinorhizobium meliloti USDA1795 Isolate Nodule
41 2916048683 Sinorhizobium meliloti USDA1796 Isolate Nodule
42 2916055098 Sinorhizobium meliloti USDA1770 Isolate Nodule
43 2916068649 Sinorhizobium meliloti USDA1220 Isolate Nodule
44 2916076590 Sinorhizobium meliloti USDA1661 Isolate Nodule
45 2921201388 Sinorhizobium meliloti USDA1692 Isolate Nodule
46 2921208531 Sinorhizobium meliloti USDA1660 Isolate Nodule
47 2921237296 Sinorhizobium meliloti USDA1508 Isolate Nodule
48 2921244191 Sinorhizobium meliloti 2119 Isolate Nodule
49 2921257292 Sinorhizobium meliloti USDA1320 Isolate Nodule
50 2921263974 Sinorhizobium meliloti USDA1107 Isolate Nodule
51 2921282425 Sinorhizobium meliloti USDA1203 Isolate Nodule
52 2921289301 Sinorhizobium meliloti USDA1730 Isolate Nodule
53 2921296804 Sinorhizobium meliloti USDA1200 Isolate Nodule
54 2924144063 Sinorhizobium meliloti USDA1022 Isolate Nodule
55 2924150972 Sinorhizobium meliloti USDA1700 Isolate Nodule
56 2924158325 Sinorhizobium meliloti USDA1146 Isolate Nodule
57 2924165586 Sinorhizobium meliloti USDA1264 Isolate Nodule
58 2924172951 Sinorhizobium meliloti USDA1626 Isolate Nodule
59 2924179722 Sinorhizobium meliloti USDA1280 Isolate Nodule
60 2924186466 Sinorhizobium meliloti USDA1389 Isolate Nodule
61 2924193448 Sinorhizobium meliloti USDA1158 Isolate Nodule
62 2924200457 Sinorhizobium meliloti USDA1007 Isolate Nodule
63 2924207177 Sinorhizobium meliloti USDA1589 Isolate Nodule
64 2924214083 Sinorhizobium meliloti USDA1702 Isolate Nodule
65 2924221636 Sinorhizobium meliloti USDA1416 Isolate Nodule
66 2924228884 Sinorhizobium meliloti USDA1581 Isolate Nodule
67 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
68 2936996657 Sinorhizobium meliloti USDA1025 Isolate Nodule
69 2937002841 Sinorhizobium meliloti USDA1006 Isolate Nodule
70 2937009748 Sinorhizobium meliloti USDA1162 Isolate Nodule
71 2937016420 Sinorhizobium meliloti USDA1027 Isolate Nodule
72 2937023124 Sinorhizobium meliloti USDA1335 Isolate Nodule
73 2937042894 Sinorhizobium meliloti USDA1687 Isolate Nodule
74 2937049772 Sinorhizobium meliloti USDA1691 Isolate Nodule
75 2937056579 Sinorhizobium meliloti USDA1357 Isolate Nodule
76 2937063883 Sinorhizobium meliloti USDA1808 Isolate Nodule
77 2937071275 Sinorhizobium meliloti USDA1623 Isolate Nodule
78 2937091812 Sinorhizobium meliloti USDA1221 Isolate Nodule
79 2937098957 Sinorhizobium meliloti USDA1519 Isolate Nodule
80 2937106411 Sinorhizobium meliloti USDA1214 Isolate Nodule
81 2937113482 Sinorhizobium meliloti USDA1180 Isolate Nodule
82 2937119839 Sinorhizobium meliloti USDA1790 Isolate Nodule
83 2937126314 Sinorhizobium meliloti USDA1612 Isolate Nodule
84 2957382221 Sinorhizobium meliloti USDA1919 Isolate Nodule
85 2957388812 Sinorhizobium meliloti USDA1195 Isolate Nodule
86 2957395598 Sinorhizobium meliloti USDA1237 Isolate Nodule
87 2957402308 Sinorhizobium meliloti USDA1794 Isolate Nodule
88 2957408893 Sinorhizobium meliloti USDA1163 Isolate Nodule
89 2957415311 Sinorhizobium meliloti USDA1724 Isolate Nodule
90 2957422303 Sinorhizobium meliloti USDA1497 Isolate Nodule
91 2957430029 Sinorhizobium meliloti USDA1590 Isolate Nodule
92 2957443900 Sinorhizobium meliloti USDA1734 Isolate Nodule
93 2957450854 Sinorhizobium meliloti USDA1655 Isolate Nodule
94 2957464669 Sinorhizobium meliloti USDA1520 Isolate Nodule
95 2957471148 Sinorhizobium meliloti USDA1204 Isolate Nodule
96 2957478035 Sinorhizobium meliloti USDA1171 Isolate Nodule
97 2957484790 Sinorhizobium meliloti USDA1464 Isolate Nodule
98 2957491536 Sinorhizobium meliloti USDA1804 Isolate Nodule
99 2957498199 Sinorhizobium meliloti USDA1561 Isolate Nodule
100 2957505466 Sinorhizobium meliloti USDA1696 Isolate Nodule
101 2960584000 Sinorhizobium meliloti USDA1530 Isolate Nodule
102 2960597568 Sinorhizobium meliloti 3085 Isolate Nodule
103 2960603979 Sinorhizobium meliloti USDA1580 Isolate Nodule
104 2960610863 Sinorhizobium meliloti USDA1792 Isolate Nodule
105 2960617483 Sinorhizobium meliloti USDA1719 Isolate Nodule
106 2960624210 Sinorhizobium meliloti USDA1415 Isolate Nodule
107 2960637947 Sinorhizobium meliloti USDA1202 Isolate Nodule
108 2960645483 Sinorhizobium meliloti USDA1703 Isolate Nodule
109 2960652885 Sinorhizobium meliloti USDA1199 Isolate Nodule
110 2960660292 Sinorhizobium meliloti USDA1883 Isolate Nodule
111 2960674078 Sinorhizobium meliloti USDA1666 Isolate Nodule
112 2964607997 Sinorhizobium meliloti USDA1212 Isolate Nodule
113 2964615318 Sinorhizobium meliloti USDA1248 Isolate Nodule
114 2964621998 Sinorhizobium meliloti USDA1235 Isolate Nodule
115 2964628898 Sinorhizobium meliloti USDA1191 Isolate Nodule
116 2964636051 Sinorhizobium meliloti USDA1594 Isolate Nodule
117 2964649959 Sinorhizobium meliloti USDA1591 Isolate Nodule
118 2964656573 Sinorhizobium meliloti USDA1308 Isolate Nodule
119 2964663802 Sinorhizobium meliloti USDA1688 Isolate Nodule
120 2964670856 Sinorhizobium meliloti USDA1211 Isolate Nodule
121 2964678106 Sinorhizobium meliloti USDA1210 Isolate Nodule
122 2964685014 Sinorhizobium meliloti USDA1232 Isolate Nodule
123 2964691889 Sinorhizobium meliloti USDA1379 Isolate Nodule
124 2964698721 Sinorhizobium meliloti USDA1656 Isolate Nodule
125 2964705432 Sinorhizobium meliloti USDA1614 Isolate Nodule
126 2964712639 Sinorhizobium meliloti USDA1616 Isolate Nodule
127 2964719344 Sinorhizobium meliloti USDA1456 Isolate Nodule
128 2967664464 Sinorhizobium meliloti USDA1208 Isolate Nodule
129 2967671571 Sinorhizobium meliloti USDA1496 Isolate Nodule
130 2967678726 Sinorhizobium meliloti USDA1467 Isolate Nodule
131 2967693043 Sinorhizobium meliloti USDA1183 Isolate Nodule
132 2967699805 Sinorhizobium meliloti USDA1695 Isolate Nodule
133 2967706974 Sinorhizobium meliloti USDA1206 Isolate Nodule
134 2967714385 Sinorhizobium meliloti USDA1023 Isolate Nodule
135 2967721400 Sinorhizobium meliloti USDA1742 Isolate Nodule
136 2967735183 Sinorhizobium meliloti USDA1710 Isolate Nodule
137 2967742019 Sinorhizobium meliloti USDA1676 Isolate Nodule
138 2967748971 Sinorhizobium meliloti USDA1024A Isolate Nodule
139 2967755722 Sinorhizobium meliloti USDA1302 Isolate Nodule
140 2967762386 Sinorhizobium meliloti USDA1397 Isolate Nodule
141 2967769361 Sinorhizobium meliloti USDA1005 Isolate Nodule
142 2967775926 Sinorhizobium meliloti USDA1678 Isolate Nodule
143 2970019648 Sinorhizobium meliloti USDA1603 Isolate Nodule
144 2970033650 Sinorhizobium meliloti USDA1565 Isolate Nodule
145 2970040964 Sinorhizobium meliloti USDA1501 Isolate Nodule
146 2970047711 Sinorhizobium meliloti USDA1793 Isolate Nodule
147 2970054988 Sinorhizobium meliloti USDA1031 Isolate Nodule
148 2970061556 Sinorhizobium meliloti USDA1810 Isolate Nodule
149 2970068827 Sinorhizobium meliloti USDA1227 Isolate Nodule
150 2970076120 Sinorhizobium meliloti USDA1706 Isolate Nodule
151 2970082768 Sinorhizobium meliloti USDA1803 Isolate Nodule
152 2970088815 Sinorhizobium meliloti USDA1819 Isolate Nodule
153 2970095765 Sinorhizobium meliloti USDA1225 Isolate Nodule
154 2970102677 Sinorhizobium meliloti USDA1325 Isolate Nodule
155 2970109326 Sinorhizobium meliloti USDA1186 Isolate Nodule
156 2970116247 Sinorhizobium meliloti USDA1566 Isolate Nodule
157 2970129317 Sinorhizobium meliloti USDA1008 Isolate Nodule
158 2970136068 Sinorhizobium meliloti USDA1699 Isolate Nodule
159 2970149975 Sinorhizobium meliloti USDA1215 Isolate Nodule
160 2970156795 Sinorhizobium meliloti USDA1491 Isolate Nodule
161 2970164137 Sinorhizobium meliloti USDA1018 Isolate Nodule
162 2970170962 Sinorhizobium meliloti USDA1571 Isolate Nodule
163 2970177841 Sinorhizobium meliloti USDA1533 Isolate Nodule
164 2970184632 Sinorhizobium meliloti USDA1593 Isolate Nodule
165 2970191845 Sinorhizobium meliloti USDA1187 Isolate Nodule
166 2977516862 Sinorhizobium meliloti USDA1791 Isolate Nodule
167 2977523885 Sinorhizobium meliloti USDA1777 Isolate Nodule
168 2977537788 Sinorhizobium meliloti USDA1184 Isolate Nodule
169 2977551784 Sinorhizobium meliloti USDA1035 Isolate Nodule
170 2977558990 Sinorhizobium meliloti USDA1222 Isolate Nodule
171 2977565890 Sinorhizobium meliloti USDA1617 Isolate Nodule
172 2977572785 Sinorhizobium meliloti USDA1767 Isolate Nodule
173 2977579622 Sinorhizobium meliloti USDA1161 Isolate Nodule
174 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
175 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
176 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
177 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
178 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
179 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
180 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
181 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
182 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
183 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
184 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
185 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
186 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
187 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
188 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
189 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
190 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
191 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
192 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
193 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
194 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
195 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
196 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
197 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
198 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
199 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
200 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
201 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
202 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
203 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
204 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
205 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
206 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
207 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
208 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
209 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
210 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
211 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
212 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
213 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
214 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
215 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
216 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
217 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
218 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
219 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
220 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
221 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
222 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
223 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
224 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
225 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
226 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
227 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
228 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
229 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
230 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
231 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
232 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
233 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
234 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
235 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
236 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
237 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
238 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
239 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
240 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
241 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
242 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
243 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
244 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
245 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
246 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
247 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
248 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
249 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
250 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
251 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
252 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
253 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
254 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
255 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
256 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
257 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
258 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
259 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
260 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
261 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
262 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
263 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
264 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
265 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
266 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
267 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
268 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
269 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
270 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
271 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
272 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
273 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
274 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
275 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
276 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
277 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
278 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
279 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
280 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
281 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
282 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
283 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
284 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
285 648276728 Sinorhizobium meliloti BL225C Isolate Nodule
286 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
287 8003992118 Sinorhizobium meliloti RRI128 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 43.85
Metatranscriptomes 0
Isolates 56.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.15
Nodule 52.05
Rhizoplane 1.26
Rhizosphere 36.59
Stem 0
Stem Tuber 0
Unclassified 6.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10054683 3300003203 Bacteria 1319
2 rootH2_10002564 3300003320 Bacteria 48791
3 Ga0055526_1000063 3300003771 Bacteria 103612
4 Ga0065704_10077691 3300005289 Bacteria 4630
5 Ga0065707_10088696 3300005295 Unclassified 4578
6 Ga0070682_100002735 3300005337 Bacteria 9776
7 Ga0070660_100025939 3300005339 Bacteria 4360
8 Ga0070660_100118813 3300005339 Bacteria 2108
9 Ga0070668_100003895 3300005347 Bacteria 11025
10 Ga0070659_100104920 3300005366 Bacteria 2277
11 Ga0070659_100116911 3300005366 Bacteria 2156
12 Ga0070714_100540360 3300005435 Unclassified 1115
13 Ga0070663_100204949 3300005455 Bacteria 1541
14 Ga0070681_10036007 3300005458 Bacteria 4972
15 Ga0070665_100280443 3300005548 Unclassified 1668
16 Ga0068855_100168667 3300005563 Unclassified 2480
17 Ga0068855_100350253 3300005563 Bacteria 1627
18 Ga0081455_10015710 3300005937 Bacteria 7338
19 Ga0081539_10001361 3300005985 Bacteria 42392
20 Ga0070717_10370876 3300006028 Unclassified 1282
21 Ga0075365_10069785 3300006038 Bacteria 2362
22 Ga0068871_100701037 3300006358 Unclassified 927
23 Ga0075428_100168339 3300006844 Bacteria 2377
24 Ga0075431_100117016 3300006847 Bacteria 2750
25 Ga0079104_1014238 3300006946 Bacteria 2407
26 Ga0099826_10034113 3300006948 Bacteria 3641
27 Ga0105240_10023361 3300009093 Bacteria 8180
28 Ga0105240_10051017 3300009093 Bacteria 5210
29 Ga0105248_10270694 3300009177 Bacteria 1913
30 Ga0105238_10440962 3300009551 Bacteria 1298
31 Ga0105249_10000238 3300009553 Bacteria 61651
32 Ga0099796_10092085 3300010159 Bacteria 1128
33 Ga0157373_10153030 3300013100 Bacteria 1622
34 Ga0157371_10014318 3300013102 Bacteria 5991
35 Ga0157371_10089846 3300013102 Bacteria 2176
36 Ga0157371_10222001 3300013102 Bacteria 1357
37 Ga0157370_10070924 3300013104 Bacteria 3288
38 Ga0157370_10446271 3300013104 Unclassified 1189
39 Ga0157369_10013430 3300013105 Bacteria 9258
40 Ga0157369_10017305 3300013105 Bacteria 8103
41 Ga0157378_10174538 3300013297 Bacteria 2018
42 Ga0163162_10007671 3300013306 Bacteria 10507
43 Ga0182008_10116105 3300014497 Bacteria 1328
44 Ga0182008_10197133 3300014497 Bacteria 1023
45 Ga0157379_10046237 3300014968 Bacteria 3884
46 Ga0182007_10008064 3300015262 Bacteria 4350
47 Ga0182007_10043274 3300015262 Bacteria 1497
48 Ga0182007_10050251 3300015262 Bacteria 1377
49 Ga0209564_1000006 3300025295 Bacteria 1100927
50 Ga0207707_10021852 3300025912 Bacteria 5592
51 Ga0207695_10017805 3300025913 Bacteria 8243
52 Ga0207695_10112111 3300025913 Bacteria 2706
53 Ga0207657_10047603 3300025919 Bacteria 3747
54 Ga0207664_10226164 3300025929 Unclassified 1625
55 Ga0207690_10002614 3300025932 Bacteria 10846
56 Ga0207690_10089702 3300025932 Bacteria 2168
57 Ga0207667_10135720 3300025949 Unclassified 2534
58 Ga0207712_10000231 3300025961 Bacteria 55021
59 Ga0207668_10003715 3300025972 Bacteria 8979
60 Ga0209281_1000459 3300027111 Bacteria 57396
61 Ga0307517_10027128 3300028786 Bacteria 6893
62 Ga0307517_10128647 3300028786 Eukaryota 1835
63 Ga0307512_10032234 3300030522 Bacteria 4527
64 Ga0265328_10024873 3300031239 Bacteria 2259
65 Ga0265331_10000850 3300031250 Bacteria 24826
66 Ga0265327_10001272 3300031251 Bacteria 33201
67 Ga0307513_10027512 3300031456 Bacteria 6528
68 Ga0307513_10134905 3300031456 Bacteria 2405
69 Ga0307509_10178183 3300031507 Bacteria 1995
70 Ga0307508_10047659 3300031616 Bacteria 3819
71 Ga0307516_10025484 3300031730 Bacteria 6022
72 Ga0307405_10232908 3300031731 Bacteria 1359
73 Ga0307406_10054766 3300031901 Bacteria 2547
74 Ga0307406_10057602 3300031901 Bacteria 2493
75 Ga0307414_10000636 3300032004 Bacteria 17977
76 Ga0307415_100001780 3300032126 Bacteria 10540
77 Ga0373936_0015927 3300035113 Bacteria 2885
78 Ga0395899_0000003 3300037312 Bacteria 1232684
79 Ga0395899_0048978 3300037312 Bacteria 3142
80 Ga0395898_0018459 3300037466 Bacteria 7112
81 Ga0395901_0115048 3300038443 Bacteria 2825
82 Ga0466970_0006571 3300044765 Bacteria 5812
83 Ga0495592_0167104 3300046454 Eukaryota 1509
84 Ga0495592_0171994 3300046454 Bacteria 1483
85 Ga0495638_0226439 3300046460 Bacteria 1042
86 Ga0495605_0000117 3300046474 Bacteria 103262
87 Ga0495664_0065318 3300046477 Bacteria 2169
88 Ga0495607_0002442 3300046501 Bacteria 15135
89 Ga0495606_0035786 3300046507 Eukaryota 3390
90 Ga0495608_0012938 3300046511 Eukaryota 5791
91 Ga0495618_0001487 3300046514 Eukaryota 15727
92 Ga0495628_0016262 3300046516 Eukaryota 6207
93 Ga0495630_0088081 3300046517 Eukaryota 2345
94 Ga0495631_0052425 3300046518 Bacteria 1782
95 Ga0495632_0051313 3300046519 Bacteria 2031
96 Ga0495632_0109894 3300046519 Bacteria 1295
97 Ga0495643_0000263 3300046522 Bacteria 76248
98 Ga0495652_0000530 3300046529 Eukaryota 44470
99 Ga0495652_0037871 3300046529 Bacteria 4182
100 Ga0495652_0044177 3300046529 Eukaryota 3838
101 Ga0495645_0008512 3300046543 Eukaryota 7166
102 Ga0495645_0018551 3300046543 Eukaryota 4998
103 Ga0495667_0362174 3300046559 Unclassified 915
104 Ga0495668_0075094 3300046616 Bacteria 1856
105 Ga0495634_0009444 3300046642 Eukaryota 7194
106 Ga0495661_0002221 3300046665 Bacteria 15090
107 Ga0495657_0026706 3300046675 Eukaryota 4086
108 Ga0495599_0026417 3300046678 Eukaryota 3638
109 Ga0495599_0278668 3300046678 Bacteria 1013
110 Ga0495623_0027653 3300046679 Eukaryota 3651
111 Ga0495646_0185277 3300046680 Eukaryota 1140
112 Ga0495589_0000034 3300046794 Bacteria 162449
113 Ga0495660_0000054 3300046810 Bacteria 135325
114 Ga0495604_0098882 3300047317 Eukaryota 2148
115 Ga0495604_0136238 3300047317 Bacteria 1759
116 Ga0495674_0122289 3300047319 Bacteria 2198
117 Ga0495672_0001329 3300047320 Bacteria 24574
118 Ga0495683_0094246 3300047323 Bacteria 1447
119 Ga0495687_000287 3300047443 Bacteria 66402
120 Ga0495677_0000647 3300047445 Bacteria 14036
121 Ga0495602_0021221 3300048088 Eukaryota 6400
122 Ga0495602_0044388 3300048088 Eukaryota 4032
123 Ga0495626_0000409 3300048091 Bacteria 44004
124 Ga0496100_0170814 3300048903 Bacteria 1566
125 Ga0496105_0094628 3300048908 Bacteria 2467
126 Ga0496115_0452123 3300048918 Bacteria 1037
127 Ga0501241_009081 3300049758 Bacteria 1811
128 Ga0501035_0004671 3300049822 Bacteria 13000
129 Ga0501035_0031084 3300049822 Bacteria 4863
130 Ga0501044_0000174 3300049823 Bacteria 79875
131 nmdc:mga06r32_27503_c1 3300050510 Bacteria 5314
132 Ga0500566_0018252 3300053094 Bacteria 4122
133 Ga0500568_0007260 3300053139 Bacteria 5458
134 Ga0500568_0045183 3300053139 Bacteria 1754
135 Ga0500577_0003428 3300053142 Bacteria 4118
136 Ga0500622_0007698 3300053156 Bacteria 6089
137 Ga0500622_0043783 3300053156 Bacteria 2321
138 Ga0500634_0073218 3300053161 Unclassified 1786
139 Ga0501084_0118661 3300054114 Bacteria 2224

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046559 Ga0495667_0362174 Ga0495667_0362174_111_899 255
2 3300013297 Ga0157378_10174538 Ga0157378_101745382 277
3 3300031731 Ga0307405_10232908 Ga0307405_102329081 280
4 3300031901 Ga0307406_10057602 Ga0307406_100576022 280
5 3300032126 Ga0307415_100001780 Ga0307415_1000017803 280
6 3300046507 Ga0495606_0035786 Ga0495606_0035786_1080_2078 280
7 3300009551 Ga0105238_10440962 Ga0105238_104409622 281
8 3300014497 Ga0182008_10116105 Ga0182008_101161051 281
9 3300015262 Ga0182007_10043274 Ga0182007_100432742 281
10 3300030522 Ga0307512_10032234 Ga0307512_100322343 281
11 3300031616 Ga0307508_10047659 Ga0307508_100476593 281
12 3300044765 Ga0466970_0006571 Ga0466970_0006571_839_1714 282
13 iso_pu_bacteria 2510065057 2510305586 286
14 iso_pu_bacteria 2511231052 2511499086 286
15 iso_pu_bacteria 2513237086 2513583898 286
16 iso_pu_bacteria 2513237091 2513615927 286
17 iso_pu_bacteria 2513237140 2513883518 286
18 iso_pu_bacteria 2515154107 2515610043 286
19 iso_pu_bacteria 2516653046 2516898164 286
20 iso_pu_bacteria 2524023207 2524451699 286
21 iso_pu_bacteria 2551306084 2551677288 286
22 iso_pu_bacteria 2551306085 2551684889 286
23 iso_pu_bacteria 2551306086 2551693177 286
24 iso_pu_bacteria 2551306087 2551698226 286
25 iso_pu_bacteria 2551306089 2551708638 286
26 iso_pu_bacteria 2551306090 2551723782 286
27 iso_pu_bacteria 2551306091 2551728827 286
28 iso_pu_bacteria 2551306092 2551735741 286
29 iso_pu_bacteria 2551306092 2551737416 286
30 iso_pu_bacteria 2551306093 2551740908 286
31 iso_pu_bacteria 2585428106 2587917743 286
32 iso_pu_bacteria 2643221640 2644226737 286
33 iso_pu_bacteria 2643221642 2644233793 286
34 iso_pu_bacteria 2738541294 2738812214 286
35 iso_pu_bacteria 2738541309 2738899574 286
36 iso_pu_bacteria 2767802442 2770199887 286
37 iso_pu_bacteria 2840764183 2840764374 286
38 iso_pu_bacteria 2840764183 2840769730 286
39 iso_pu_bacteria 2855825444 2855829797 286
40 iso_pu_bacteria 2855839649 2855846077 286
41 iso_pu_bacteria 2858800743 2858804190 286
42 iso_pu_bacteria 2915986958 2915992687 286
43 iso_pu_bacteria 2915993759 2915999250 286
44 iso_pu_bacteria 2916000859 2916004235 286
45 iso_pu_bacteria 2916007675 2916011854 286
46 iso_pu_bacteria 2916014648 2916017407 286
47 iso_pu_bacteria 2916021584 2916023610 286
48 iso_pu_bacteria 2916028427 2916028722 286
49 iso_pu_bacteria 2916035215 2916035611 286
50 iso_pu_bacteria 2916041962 2916043537 286
51 iso_pu_bacteria 2916048683 2916049814 286
52 iso_pu_bacteria 2916055098 2916056112 286
53 iso_pu_bacteria 2916068649 2916070172 286
54 iso_pu_bacteria 2916076590 2916080312 286
55 iso_pu_bacteria 2921201388 2921203769 286
56 iso_pu_bacteria 2921208531 2921209018 286
57 iso_pu_bacteria 2921237296 2921240149 286
58 iso_pu_bacteria 2921244191 2921247909 286
59 iso_pu_bacteria 2921257292 2921258117 286
60 iso_pu_bacteria 2921263974 2921264346 286
61 iso_pu_bacteria 2921282425 2921286060 286
62 iso_pu_bacteria 2921289301 2921296477 286
63 iso_pu_bacteria 2921296804 2921301203 286
64 iso_pu_bacteria 2924144063 2924149968 286
65 iso_pu_bacteria 2924150972 2924153607 286
66 iso_pu_bacteria 2924158325 2924162834 286
67 iso_pu_bacteria 2924165586 2924171682 286
68 iso_pu_bacteria 2924172951 2924179413 286
69 iso_pu_bacteria 2924179722 2924182913 286
70 iso_pu_bacteria 2924186466 2924191284 286
71 iso_pu_bacteria 2924193448 2924199842 286
72 iso_pu_bacteria 2924200457 2924201092 286
73 iso_pu_bacteria 2924207177 2924211634 286
74 iso_pu_bacteria 2924214083 2924218125 286
75 iso_pu_bacteria 2924221636 2924221736 286
76 iso_pu_bacteria 2924228884 2924234500 286
77 iso_pu_bacteria 2928531327 2928535804 286
78 iso_pu_bacteria 2936996657 2936997321 286
79 iso_pu_bacteria 2937002841 2937006391 286
80 iso_pu_bacteria 2937009748 2937016205 286
81 iso_pu_bacteria 2937016420 2937021130 286
82 iso_pu_bacteria 2937023124 2937024911 286
83 iso_pu_bacteria 2937042894 2937045126 286
84 iso_pu_bacteria 2937049772 2937049928 286
85 iso_pu_bacteria 2937056579 2937056636 286
86 iso_pu_bacteria 2937063883 2937070927 286
87 iso_pu_bacteria 2937071275 2937073393 286
88 iso_pu_bacteria 2937091812 2937091946 286
89 iso_pu_bacteria 2937098957 2937106133 286
90 iso_pu_bacteria 2937106411 2937106553 286
91 iso_pu_bacteria 2937113482 2937113696 286
92 iso_pu_bacteria 2937119839 2937123498 286
93 iso_pu_bacteria 2937126314 2937126522 286
94 iso_pu_bacteria 2957382221 2957383533 286
95 iso_pu_bacteria 2957388812 2957390853 286
96 iso_pu_bacteria 2957395598 2957397621 286
97 iso_pu_bacteria 2957402308 2957408732 286
98 iso_pu_bacteria 2957408893 2957412834 286
99 iso_pu_bacteria 2957415311 2957420430 286
100 iso_pu_bacteria 2957422303 2957423100 286
101 iso_pu_bacteria 2957430029 2957432281 286
102 iso_pu_bacteria 2957443900 2957448051 286
103 iso_pu_bacteria 2957450854 2957454055 286
104 iso_pu_bacteria 2957464669 2957470115 286
105 iso_pu_bacteria 2957471148 2957476295 286
106 iso_pu_bacteria 2957478035 2957478199 286
107 iso_pu_bacteria 2957484790 2957487827 286
108 iso_pu_bacteria 2957491536 2957493632 286
109 iso_pu_bacteria 2957498199 2957498354 286
110 iso_pu_bacteria 2957505466 2957511187 286
111 iso_pu_bacteria 2960584000 2960589053 286
112 iso_pu_bacteria 2960597568 2960597803 286
113 iso_pu_bacteria 2960603979 2960607122 286
114 iso_pu_bacteria 2960610863 2960613464 286
115 iso_pu_bacteria 2960617483 2960620753 286
116 iso_pu_bacteria 2960624210 2960624792 286
117 iso_pu_bacteria 2960637947 2960640595 286
118 iso_pu_bacteria 2960645483 2960649932 286
119 iso_pu_bacteria 2960652885 2960654271 286
120 iso_pu_bacteria 2960660292 2960661146 286
121 iso_pu_bacteria 2960674078 2960678651 286
122 iso_pu_bacteria 2964607997 2964608138 286
123 iso_pu_bacteria 2964615318 2964615571 286
124 iso_pu_bacteria 2964621998 2964622095 286
125 iso_pu_bacteria 2964628898 2964631980 286
126 iso_pu_bacteria 2964636051 2964638615 286
127 iso_pu_bacteria 2964649959 2964654566 286
128 iso_pu_bacteria 2964656573 2964660756 286
129 iso_pu_bacteria 2964663802 2964668372 286
130 iso_pu_bacteria 2964670856 2964675608 286
131 iso_pu_bacteria 2964678106 2964683921 286
132 iso_pu_bacteria 2964685014 2964689733 286
133 iso_pu_bacteria 2964691889 2964692024 286
134 iso_pu_bacteria 2964698721 2964701402 286
135 iso_pu_bacteria 2964705432 2964706802 286
136 iso_pu_bacteria 2964712639 2964714811 286
137 iso_pu_bacteria 2964719344 2964719447 286
138 iso_pu_bacteria 2967664464 2967670038 286
139 iso_pu_bacteria 2967671571 2967676444 286
140 iso_pu_bacteria 2967678726 2967679292 286
141 iso_pu_bacteria 2967693043 2967694403 286
142 iso_pu_bacteria 2967699805 2967705322 286
143 iso_pu_bacteria 2967706974 2967710342 286
144 iso_pu_bacteria 2967714385 2967715108 286
145 iso_pu_bacteria 2967721400 2967728280 286
146 iso_pu_bacteria 2967735183 2967735748 286
147 iso_pu_bacteria 2967742019 2967745984 286
148 iso_pu_bacteria 2967748971 2967749777 286
149 iso_pu_bacteria 2967755722 2967758162 286
150 iso_pu_bacteria 2967762386 2967763254 286
151 iso_pu_bacteria 2967769361 2967769711 286
152 iso_pu_bacteria 2967775926 2967780416 286
153 iso_pu_bacteria 2970019648 2970020254 286
154 iso_pu_bacteria 2970033650 2970039103 286
155 iso_pu_bacteria 2970040964 2970044775 286
156 iso_pu_bacteria 2970047711 2970047829 286
157 iso_pu_bacteria 2970054988 2970058483 286
158 iso_pu_bacteria 2970061556 2970061711 286
159 iso_pu_bacteria 2970068827 2970073213 286
160 iso_pu_bacteria 2970076120 2970078918 286
161 iso_pu_bacteria 2970082768 2970085411 286
162 iso_pu_bacteria 2970088815 2970088969 286
163 iso_pu_bacteria 2970095765 2970099775 286
164 iso_pu_bacteria 2970102677 2970105555 286
165 iso_pu_bacteria 2970109326 2970113366 286
166 iso_pu_bacteria 2970116247 2970121745 286
167 iso_pu_bacteria 2970129317 2970131048 286
168 iso_pu_bacteria 2970136068 2970138728 286
169 iso_pu_bacteria 2970149975 2970155204 286
170 iso_pu_bacteria 2970156795 2970156913 286
171 iso_pu_bacteria 2970164137 2970164345 286
172 iso_pu_bacteria 2970170962 2970173063 286
173 iso_pu_bacteria 2970177841 2970183120 286
174 iso_pu_bacteria 2970184632 2970190106 286
175 iso_pu_bacteria 2970191845 2970192456 286
176 iso_pu_bacteria 2977516862 2977522454 286
177 iso_pu_bacteria 2977523885 2977526075 286
178 iso_pu_bacteria 2977537788 2977541786 286
179 iso_pu_bacteria 2977551784 2977555047 286
180 iso_pu_bacteria 2977558990 2977561417 286
181 iso_pu_bacteria 2977565890 2977572575 286
182 iso_pu_bacteria 2977572785 2977575882 286
183 iso_pu_bacteria 2977579622 2977579992 286
184 iso_pu_bacteria 648276728 648736174 286
185 iso_pu_bacteria 8001845381 8001848404 286
186 iso_pu_bacteria 8003992118 8003998530 286
187 3300037312 Ga0395899_0048978 Ga0395899_0048978_814_1710 287
188 3300037466 Ga0395898_0018459 Ga0395898_0018459_598_1494 287
189 3300038443 Ga0395901_0115048 Ga0395901_0115048_341_1237 287
190 3300046474 Ga0495605_0000117 Ga0495605_0000117_20095_20958 287
191 3300046501 Ga0495607_0002442 Ga0495607_0002442_6547_7410 287
192 3300046518 Ga0495631_0052425 Ga0495631_0052425_626_1489 287
193 3300046519 Ga0495632_0051313 Ga0495632_0051313_683_1546 287
194 3300046522 Ga0495643_0000263 Ga0495643_0000263_52774_53637 287
195 3300046665 Ga0495661_0002221 Ga0495661_0002221_6561_7424 287
196 3300046794 Ga0495589_0000034 Ga0495589_0000034_156222_157085 287
197 3300046810 Ga0495660_0000054 Ga0495660_0000054_22612_23475 287
198 3300047320 Ga0495672_0001329 Ga0495672_0001329_7253_8116 287
199 3300047323 Ga0495683_0094246 Ga0495683_0094246_53_916 287
200 3300047443 Ga0495687_000287 Ga0495687_000287_18802_19665 287
201 3300047445 Ga0495677_0000647 Ga0495677_0000647_12483_13346 287
202 3300048091 Ga0495626_0000409 Ga0495626_0000409_43014_43877 287
203 3300005563 Ga0068855_100350253 Ga0068855_1003502532 288
204 3300009093 Ga0105240_10051017 Ga0105240_100510175 288
205 3300013104 Ga0157370_10070924 Ga0157370_100709242 288
206 3300025913 Ga0207695_10112111 Ga0207695_101121112 288
207 3300003320 rootH2_10002564 rootH2_1000256433 289
208 3300003771 Ga0055526_1000063 Ga0055526_100006318 289
209 3300005937 Ga0081455_10015710 Ga0081455_100157104 289
210 3300006038 Ga0075365_10069785 Ga0075365_100697852 289
211 3300006358 Ga0068871_100701037 Ga0068871_1007010371 289
212 3300006844 Ga0075428_100168339 Ga0075428_1001683394 289
213 3300006847 Ga0075431_100117016 Ga0075431_1001170163 289
214 3300009177 Ga0105248_10270694 Ga0105248_102706942 289
215 3300013306 Ga0163162_10007671 Ga0163162_100076716 289
216 3300014968 Ga0157379_10046237 Ga0157379_100462374 289
217 3300025295 Ga0209564_1000006 Ga0209564_1000006809 289
218 3300028786 Ga0307517_10128647 Ga0307517_101286472 289
219 3300031456 Ga0307513_10134905 Ga0307513_101349052 289
220 3300031901 Ga0307406_10054766 Ga0307406_100547663 289
221 3300032004 Ga0307414_10000636 Ga0307414_1000063611 289
222 3300046454 Ga0495592_0167104 Ga0495592_0167104_115_1110 289
223 3300046454 Ga0495592_0171994 Ga0495592_0171994_512_1402 289
224 3300046477 Ga0495664_0065318 Ga0495664_0065318_1246_2136 289
225 3300046511 Ga0495608_0012938 Ga0495608_0012938_3501_4496 289
226 3300046514 Ga0495618_0001487 Ga0495618_0001487_2258_3253 289
227 3300046516 Ga0495628_0016262 Ga0495628_0016262_5163_6158 289
228 3300046517 Ga0495630_0088081 Ga0495630_0088081_185_1180 289
229 3300046529 Ga0495652_0000530 Ga0495652_0000530_25320_26309 289
230 3300046529 Ga0495652_0037871 Ga0495652_0037871_1142_2032 289
231 3300046529 Ga0495652_0044177 Ga0495652_0044177_2099_3094 289
232 3300046543 Ga0495645_0008512 Ga0495645_0008512_4278_5273 289
233 3300046543 Ga0495645_0018551 Ga0495645_0018551_1783_2772 289
234 3300046642 Ga0495634_0009444 Ga0495634_0009444_1121_2116 289
235 3300046675 Ga0495657_0026706 Ga0495657_0026706_104_1099 289
236 3300046678 Ga0495599_0026417 Ga0495599_0026417_1408_2403 289
237 3300046678 Ga0495599_0278668 Ga0495599_0278668_79_969 289
238 3300046679 Ga0495623_0027653 Ga0495623_0027653_23_1012 289
239 3300046680 Ga0495646_0185277 Ga0495646_0185277_48_1043 289
240 3300047317 Ga0495604_0098882 Ga0495604_0098882_343_1332 289
241 3300047317 Ga0495604_0136238 Ga0495604_0136238_688_1578 289
242 3300047319 Ga0495674_0122289 Ga0495674_0122289_79_969 289
243 3300048088 Ga0495602_0021221 Ga0495602_0021221_3724_4713 289
244 3300048088 Ga0495602_0044388 Ga0495602_0044388_49_1044 289
245 3300048903 Ga0496100_0170814 Ga0496100_0170814_639_1529 289
246 3300048908 Ga0496105_0094628 Ga0496105_0094628_129_1019 289
247 3300048918 Ga0496115_0452123 Ga0496115_0452123_85_975 289
248 3300050510 nmdc:mga06r32_27503_c1 nmdc:mga06r32_27503_c1_3105_4001 289
249 3300054114 Ga0501084_0118661 Ga0501084_0118661_87_983 289
250 iso_pu_bacteria 2643221591 2643965287 289
251 iso_pu_bacteria 2882632389 2882637714 289
252 3300003203 JGI25406J46586_10054683 JGI25406J46586_100546831 290
253 3300005289 Ga0065704_10077691 Ga0065704_100776914 290
254 3300005295 Ga0065707_10088696 Ga0065707_100886963 290
255 3300005337 Ga0070682_100002735 Ga0070682_1000027356 290
256 3300005339 Ga0070660_100025939 Ga0070660_1000259394 290
257 3300005339 Ga0070660_100118813 Ga0070660_1001188131 290
258 3300005347 Ga0070668_100003895 Ga0070668_1000038954 290
259 3300005366 Ga0070659_100104920 Ga0070659_1001049202 290
260 3300005366 Ga0070659_100116911 Ga0070659_1001169112 290
261 3300005435 Ga0070714_100540360 Ga0070714_1005403602 290
262 3300005455 Ga0070663_100204949 Ga0070663_1002049492 290
263 3300005458 Ga0070681_10036007 Ga0070681_100360072 290
264 3300005548 Ga0070665_100280443 Ga0070665_1002804433 290
265 3300005563 Ga0068855_100168667 Ga0068855_1001686672 290
266 3300005985 Ga0081539_10001361 Ga0081539_100013619 290
267 3300006028 Ga0070717_10370876 Ga0070717_103708761 290
268 3300006946 Ga0079104_1014238 Ga0079104_10142383 290
269 3300006948 Ga0099826_10034113 Ga0099826_100341132 290
270 3300009093 Ga0105240_10023361 Ga0105240_100233612 290
271 3300009553 Ga0105249_10000238 Ga0105249_1000023845 290
272 3300010159 Ga0099796_10092085 Ga0099796_100920851 290
273 3300013100 Ga0157373_10153030 Ga0157373_101530303 290
274 3300013102 Ga0157371_10014318 Ga0157371_100143185 290
275 3300013102 Ga0157371_10089846 Ga0157371_100898462 290
276 3300013102 Ga0157371_10222001 Ga0157371_102220012 290
277 3300013104 Ga0157370_10446271 Ga0157370_104462711 290
278 3300013105 Ga0157369_10013430 Ga0157369_1001343011 290
279 3300013105 Ga0157369_10017305 Ga0157369_100173059 290
280 3300014497 Ga0182008_10197133 Ga0182008_101971331 290
281 3300015262 Ga0182007_10008064 Ga0182007_100080642 290
282 3300015262 Ga0182007_10050251 Ga0182007_100502512 290
283 3300025912 Ga0207707_10021852 Ga0207707_100218524 290
284 3300025913 Ga0207695_10017805 Ga0207695_1001780511 290
285 3300025919 Ga0207657_10047603 Ga0207657_100476031 290
286 3300025929 Ga0207664_10226164 Ga0207664_102261642 290
287 3300025932 Ga0207690_10002614 Ga0207690_100026143 290
288 3300025932 Ga0207690_10089702 Ga0207690_100897023 290
289 3300025949 Ga0207667_10135720 Ga0207667_101357203 290
290 3300025961 Ga0207712_10000231 Ga0207712_100002316 290
291 3300025972 Ga0207668_10003715 Ga0207668_100037158 290
292 3300027111 Ga0209281_1000459 Ga0209281_100045956 290
293 3300028786 Ga0307517_10027128 Ga0307517_100271282 290
294 3300031239 Ga0265328_10024873 Ga0265328_100248732 290
295 3300031250 Ga0265331_10000850 Ga0265331_1000085021 290
296 3300031251 Ga0265327_10001272 Ga0265327_1000127225 290
297 3300031456 Ga0307513_10027512 Ga0307513_100275126 290
298 3300031507 Ga0307509_10178183 Ga0307509_101781832 290
299 3300031730 Ga0307516_10025484 Ga0307516_100254843 290
300 3300035113 Ga0373936_0015927 Ga0373936_0015927_973_1896 290
301 3300037312 Ga0395899_0000003 Ga0395899_0000003_990433_991317 290
302 3300046460 Ga0495638_0226439 Ga0495638_0226439_156_1031 290
303 3300046519 Ga0495632_0109894 Ga0495632_0109894_350_1228 290
304 3300046616 Ga0495668_0075094 Ga0495668_0075094_428_1303 290
305 3300049758 Ga0501241_009081 Ga0501241_009081_923_1798 290
306 3300049822 Ga0501035_0004671 Ga0501035_0004671_11904_12788 290
307 3300049822 Ga0501035_0031084 Ga0501035_0031084_503_1384 290
308 3300049823 Ga0501044_0000174 Ga0501044_0000174_24805_25689 290
309 3300053094 Ga0500566_0018252 Ga0500566_0018252_2206_3117 290
310 3300053139 Ga0500568_0007260 Ga0500568_0007260_848_1738 290
311 3300053139 Ga0500568_0045183 Ga0500568_0045183_433_1308 290
312 3300053142 Ga0500577_0003428 Ga0500577_0003428_1679_2554 290
313 3300053156 Ga0500622_0007698 Ga0500622_0007698_4184_5059 290
314 3300053156 Ga0500622_0043783 Ga0500622_0043783_1199_2074 290
315 3300053161 Ga0500634_0073218 Ga0500634_0073218_527_1462 290
316 iso_pu_bacteria 2775506902 2776271364 290
317 iso_pu_bacteria 2775506904 2776280635 290

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02567

PhzC-PhzF

Phenazine biosynthesis-like protein

5

282

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
1u1x-assembly1.cif.gz_B structure and function of phenazine-biosynthesis protein phzf from pseudomonas fluorescens 2-79 0.894 2 290
1u1x-assembly1.cif.gz_B structure and function of phenazine-biosynthesis protein phzf from pseudomonas fluorescens 2-79 0.8909 2 290
5iwe-assembly1.cif.gz_A-2 e45q mutant of phenazine biosynthesis protein phzf in complex with (5r,6r)-6-azaniumyl-5-ethoxycyclohexa-1,3-diene-1-carboxylate 0.8898 2 290
5iwe-assembly1.cif.gz_A-2 e45q mutant of phenazine biosynthesis protein phzf in complex with (5r,6r)-6-azaniumyl-5-ethoxycyclohexa-1,3-diene-1-carboxylate 0.8868 2 290
1u0k-assembly1.cif.gz_B the structure of a predicted epimerase pa4716 from pseudomonas aeruginosa 0.884 4 290
ID Description Score Start End Superfamily
1sdjA01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9326 3 126 3.10.310.10
1qyaA01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.8876 2 126 3.10.310.10
1u1vA01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.8816 5 120 3.10.310.10
af_Q8NIL3_2_111_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.8796 2 110 3.10.310.10
1u0kB01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.8794 4 117 3.10.310.10
ID Description Score Start End GO Terms
AF-A0A4R1T5C2-F1-model_v4 deleted 0.9772 1 71
AF-A0A662RZB8-F1-model_v4 PhzF family phenazine biosynthesis protein 0.9518 127 248 GO:0003824
GO:0009058
AF-A0A527ZB93-F1-model_v4 PhzF family phenazine biosynthesis protein 0.9482 136 246 GO:0003824
GO:0009058
AF-A0A7X0AG51-F1-model_v4 PhzF family phenazine biosynthesis protein 0.9467 1 290 GO:0005737
GO:0009058
GO:0016853
AF-A0A134ALK9-F1-model_v4 Phenazine biosynthesis protein, PhzF family 0.945 2 290 GO:0005737
GO:0009058
GO:0016853

Feature Viewer

pLDDT pTM Quality
94.81 0.92 High
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Predicted Structure (AlphaFold2)

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