F403955

General Info

Members Datasets Scaffolds Average Seq Length
316 225 632 482

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2912723979|2912724461
Length 531
Sequence RRSLGSCVRAVRASPRPGQGREAPLTVHHLNQLLLVCSLVLLVAVAAVRISSRSGLPSLLVYLGIGVVMGQDGLGHIRFDSAAVTQVMGYAALVVILAEGGLGTKWKEIRPVLSSASVLATGGVAVSVGVTAAGAHYLVGLDWRQALIVGAVVSSTDAAAVFSVLRRIPLPSRVTGTLEAESGFNDAPVVILVVAFSTAGPVEHWYLLLGEIALELAIGAAVGLAVGFAGSWGLRHVALPASGLYPIAVMAIAISAYAAGALGHGSGFLAVYLASMVLGNAKLPHWPATRGFAEGLGWIAQIGMFVLLGLLVTPHELGDDVVPALVIGLVLTMVARPLSVVLSLTPFRVPWQEQTLMSWAGLRGAVPIILATIPMVNGVEGSRSIFNIVFVLVVVYTLVQGPTLPWLARKLRLGEKGEAADLGIESAPLERLRGHLLSVTIPEESRMHGVEIAELRLPSGSAVTLVVREGKSFVPLPSTVLRRGDELLVVATDPVRDAAERRLRAVAHGGKLASWLGTDGAQAGGSGTGKR

Samples

Sample ID Description Type Environment
1 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
2 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
3 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
4 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
6 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
7 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
8 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
9 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
10 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
11 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
12 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
13 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
14 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
15 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
16 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
17 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
18 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
20 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
21 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
22 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
23 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
24 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
25 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
26 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
27 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
28 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
29 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
30 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
31 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
32 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
33 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
34 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
35 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
36 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
37 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
38 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
39 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
40 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
41 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
42 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
43 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
44 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
45 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
46 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
47 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
48 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
49 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
50 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
51 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
52 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
53 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
54 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
55 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
56 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
57 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
58 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
59 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
60 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
61 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
62 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
63 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
64 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
65 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
66 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
67 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
68 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
69 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
70 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
71 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
72 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
73 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
74 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
75 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
76 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
77 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
78 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
79 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
80 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
81 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
82 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
83 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
84 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
85 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
86 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
87 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
88 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
89 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
90 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
91 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
92 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
93 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
94 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
95 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
96 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
97 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
98 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
99 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
100 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
101 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
102 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
103 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
104 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
105 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
106 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
107 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
108 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
109 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
110 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
111 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
112 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
113 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
114 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
115 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
116 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
117 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
118 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
136 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
139 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
140 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
141 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
142 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
146 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
153 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
154 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
155 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
156 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
157 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
158 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
159 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
160 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
161 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
162 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
163 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
164 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
165 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
166 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
167 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
168 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
169 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
170 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
171 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
172 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
173 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
174 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
175 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
176 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
177 2643221647 Streptomyces sp. Root369 Isolate Unclassified
178 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
179 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
180 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
181 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
182 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
183 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
184 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere
185 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
186 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
187 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
188 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
189 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
190 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
191 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
192 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
193 2867369537 Streptomyces sp. Z26 Isolate Unclassified
194 2867428634 Streptomyces sp. RP5T Isolate Unclassified
195 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
196 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
197 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
198 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
199 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
200 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
201 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
202 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
203 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
204 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
205 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
206 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
207 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
208 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
209 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
210 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
211 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
212 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
213 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
214 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
215 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
216 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
217 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
218 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
219 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
220 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
221 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
222 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
223 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
224 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
225 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.01
Metatranscriptomes 0
Isolates 18.99

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.11
Nodule 0.32
Rhizoplane 1.9
Rhizosphere 81.65
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070685_10016820 3300005466 Bacteria 3903
2 Ga0070698_100010594 3300005471 Bacteria 9823
3 Ga0068853_100140864 3300005539 Bacteria 2165
4 Ga0081455_10000030 3300005937 Bacteria 148346
5 Ga0081455_10085384 3300005937 Bacteria 2574
6 Ga0075363_100013186 3300006048 Bacteria 3999
7 Ga0075428_100005979 3300006844 Bacteria 13519
8 Ga0075431_100002333 3300006847 Bacteria 18236
9 Ga0075431_100012691 3300006847 Bacteria 8509
10 Ga0075429_100007915 3300006880 Bacteria 9233
11 Ga0099826_10040080 3300006948 Bacteria 3269
12 Ga0111539_10006276 3300009094 Bacteria 15347
13 Ga0114129_10017779 3300009147 Bacteria 10124
14 Ga0105239_10076266 3300010375 Bacteria 3687
15 Ga0105246_10009642 3300011119 Bacteria 5951
16 Ga0182008_10003143 3300014497 Bacteria 10102
17 Ga0182007_10001538 3300015262 Bacteria 12301
18 Ga0183367_1005 3300015688 Bacteria 652063
19 Ga0209758_1004057 3300025297 Bacteria 12618
20 Ga0207647_10002532 3300025904 Bacteria 13843
21 Ga0209371_1006197 3300027312 Bacteria 4503
22 Ga0207428_10003898 3300027907 Bacteria 14307
23 Ga0307517_10006259 3300028786 Bacteria 17687
24 Ga0307515_10000054 3300028794 Bacteria 265489
25 Ga0307515_10021567 3300028794 Bacteria 11412
26 Ga0268256_1012004 3300030500 Bacteria 2704
27 Ga0307511_10000604 3300030521 Bacteria 38490
28 Ga0307513_10007543 3300031456 Bacteria 14071
29 Ga0307509_10011255 3300031507 Bacteria 10856
30 Ga0307508_10006194 3300031616 Bacteria 11284
31 Ga0307508_10011693 3300031616 Bacteria 8023
32 Ga0307508_10024455 3300031616 Bacteria 5481
33 Ga0307508_10043908 3300031616 Bacteria 4002
34 Ga0307514_10004003 3300031649 Bacteria 13744
35 Ga0307516_10008824 3300031730 Bacteria 11328
36 Ga0307516_10024088 3300031730 Bacteria 6223
37 Ga0307516_10082719 3300031730 Bacteria 3052
38 Ga0307507_10025619 3300033179 Bacteria 6392
39 Ga0307507_10102167 3300033179 Bacteria 2393
40 Ga0307510_10004987 3300033180 Bacteria 15713
41 Ga0307510_10027952 3300033180 Bacteria 6449
42 Ga0307510_10163927 3300033180 Bacteria 1814
43 Ga0395898_0051007 3300037466 Bacteria 4047
44 Ga0395901_0020579 3300038443 Bacteria 6752
45 Ga0439436_0008465 3300041404 Bacteria 3164
46 Ga0439439_0000895 3300041406 Bacteria 5504
47 Ga0439448_0012109 3300042005 Bacteria 2576
48 Ga0439449_0000256 3300042007 Bacteria 19084
49 Ga0439449_0005123 3300042007 Bacteria 5040
50 Ga0439457_003164 3300042014 Bacteria 4541
51 Ga0439462_0001669 3300042015 Bacteria 5001
52 Ga0450903_000058 3300042138 Bacteria 22483
53 Ga0439458_0000135 3300042157 Bacteria 15720
54 Ga0450901_003252 3300042533 Bacteria 1705
55 Ga0466969_0002927 3300044656 Bacteria 9108
56 Ga0466969_0028548 3300044656 Bacteria 2851
57 Ga0466972_0004902 3300044658 Bacteria 6715
58 Ga0466972_0010834 3300044658 Bacteria 4576
59 Ga0466972_0022230 3300044658 Bacteria 3159
60 Ga0466966_0000415 3300044684 Bacteria 27468
61 Ga0466966_0006723 3300044684 Bacteria 7617
62 Ga0466961_0001528 3300044693 Bacteria 14328
63 Ga0466961_0008281 3300044693 Bacteria 6620
64 Ga0466961_0008634 3300044693 Bacteria 6493
65 Ga0466963_0000217 3300044694 Bacteria 24560
66 Ga0466963_0030281 3300044694 Bacteria 3491
67 Ga0466964_0002396 3300044706 Bacteria 6660
68 Ga0466971_0000287 3300044719 Bacteria 19329
69 Ga0466971_0003517 3300044719 Bacteria 6695
70 Ga0466970_0000305 3300044765 Bacteria 23911
71 Ga0466970_0003749 3300044765 Bacteria 7432
72 Ga0466957_0001585 3300044842 Bacteria 11950
73 Ga0466957_0033160 3300044842 Bacteria 3097
74 Ga0466960_0003038 3300044901 Bacteria 6409
75 Ga0466959_0004143 3300045049 Bacteria 9657
76 Ga0466959_0004812 3300045049 Bacteria 9118
77 Ga0466959_0056825 3300045049 Bacteria 2854
78 Ga0466958_0001065 3300045836 Bacteria 12581
79 Ga0466958_0023720 3300045836 Bacteria 3604
80 Ga0466967_0001874 3300045976 Bacteria 12687
81 Ga0466967_0005254 3300045976 Bacteria 8925
82 Ga0495592_0014054 3300046454 Bacteria 6081
83 Ga0495603_0000665 3300046455 Bacteria 19429
84 Ga0495603_0001471 3300046455 Bacteria 13717
85 Ga0495603_0011984 3300046455 Bacteria 5247
86 Ga0495603_0040525 3300046455 Bacteria 2788
87 Ga0495629_0001012 3300046459 Bacteria 22585
88 Ga0495629_0004047 3300046459 Bacteria 11019
89 Ga0495629_0007929 3300046459 Bacteria 7811
90 Ga0495629_0017191 3300046459 Bacteria 5188
91 Ga0495629_0118770 3300046459 Bacteria 1842
92 Ga0495651_0007922 3300046462 Bacteria 8139
93 Ga0495651_0010764 3300046462 Bacteria 7032
94 Ga0495653_0004845 3300046463 Bacteria 10912
95 Ga0495580_0015819 3300046472 Bacteria 5680
96 Ga0495605_0035494 3300046474 Bacteria 2519
97 Ga0495662_0000249 3300046476 Bacteria 22816
98 Ga0495662_0000375 3300046476 Bacteria 19754
99 Ga0495662_0030687 3300046476 Bacteria 2595
100 Ga0495664_0001997 3300046477 Bacteria 10878
101 Ga0495584_0016013 3300046491 Bacteria 3827
102 Ga0495594_0000331 3300046499 Bacteria 23477
103 Ga0495594_0013675 3300046499 Bacteria 4241
104 Ga0495594_0049986 3300046499 Bacteria 2299
105 Ga0495596_0017658 3300046500 Bacteria 2951
106 Ga0495606_0059385 3300046507 Bacteria 2453
107 Ga0495608_0019358 3300046511 Bacteria 4685
108 Ga0495616_0023472 3300046513 Bacteria 3317
109 Ga0495620_0023938 3300046515 Bacteria 2911
110 Ga0495628_0005407 3300046516 Bacteria 11190
111 Ga0495628_0101132 3300046516 Bacteria 2224
112 Ga0495631_0007300 3300046518 Bacteria 5627
113 Ga0495632_0041155 3300046519 Bacteria 2323
114 Ga0495643_0001988 3300046522 Bacteria 17097
115 Ga0495643_0007042 3300046522 Bacteria 7305
116 Ga0495666_0018864 3300046526 Bacteria 3426
117 Ga0495652_0021580 3300046529 Bacteria 5723
118 Ga0495652_0030706 3300046529 Bacteria 4709
119 Ga0495652_0035098 3300046529 Bacteria 4366
120 Ga0495654_0020879 3300046530 Bacteria 3410
121 Ga0495640_0007014 3300046533 Bacteria 8870
122 Ga0495640_0011383 3300046533 Bacteria 6844
123 Ga0495587_0006746 3300046536 Bacteria 7473
124 Ga0495609_0002415 3300046538 Bacteria 11484
125 Ga0495597_0015524 3300046542 Bacteria 3605
126 Ga0495645_0002808 3300046543 Bacteria 11814
127 Ga0495622_0003432 3300046557 Bacteria 7469
128 Ga0495622_0034219 3300046557 Bacteria 2370
129 Ga0495633_0036958 3300046558 Bacteria 2338
130 Ga0495668_0011935 3300046616 Bacteria 5173
131 Ga0495634_0005786 3300046642 Bacteria 9441
132 Ga0495634_0008799 3300046642 Bacteria 7486
133 Ga0495611_0032025 3300046648 Bacteria 2316
134 Ga0495625_0005302 3300046660 Bacteria 11826
135 Ga0495635_0020053 3300046663 Bacteria 4659
136 Ga0495635_0027561 3300046663 Bacteria 3951
137 Ga0495635_0095651 3300046663 Bacteria 2030
138 Ga0495588_0006081 3300046674 Bacteria 5416
139 Ga0495657_0006921 3300046675 Bacteria 8813
140 Ga0495657_0077129 3300046675 Bacteria 2162
141 Ga0495623_0014495 3300046679 Bacteria 5101
142 Ga0495646_0000598 3300046680 Bacteria 19615
143 Ga0495658_0046164 3300046683 Bacteria 2448
144 Ga0495613_0007853 3300046689 Bacteria 7934
145 Ga0495613_0032458 3300046689 Bacteria 3879
146 Ga0495613_0043980 3300046689 Bacteria 3305
147 Ga0495613_0048367 3300046689 Bacteria 3140
148 Ga0495624_0011408 3300046690 Bacteria 6105
149 Ga0495671_0002477 3300046692 Bacteria 11644
150 Ga0495671_0061434 3300046692 Bacteria 1853
151 Ga0495649_0013753 3300046694 Bacteria 4659
152 Ga0495649_0080117 3300046694 Bacteria 1746
153 Ga0495600_0027905 3300046809 Bacteria 3650
154 Ga0495660_0011248 3300046810 Bacteria 5196
155 Ga0495581_0009930 3300047315 Bacteria 5507
156 Ga0495604_0000786 3300047317 Bacteria 26747
157 Ga0495604_0001175 3300047317 Bacteria 21642
158 Ga0495604_0002805 3300047317 Bacteria 13982
159 Ga0495636_0035761 3300047318 Bacteria 2046
160 Ga0495674_0169077 3300047319 Bacteria 1825
161 Ga0495672_0071823 3300047320 Bacteria 1957
162 Ga0495676_0001924 3300047321 Bacteria 18208
163 Ga0495676_0005915 3300047321 Bacteria 11230
164 Ga0495676_0015783 3300047321 Bacteria 6712
165 Ga0495680_0026484 3300047322 Bacteria 4778
166 Ga0495687_001705 3300047443 Bacteria 19527
167 Ga0495687_017528 3300047443 Bacteria 3570
168 Ga0495675_0002643 3300047444 Bacteria 10732
169 Ga0495685_000281 3300047447 Bacteria 17023
170 Ga0495685_007402 3300047447 Bacteria 3623
171 Ga0495681_0000252 3300047470 Bacteria 43738
172 Ga0495681_0017157 3300047470 Bacteria 4032
173 Ga0495681_0019369 3300047470 Bacteria 3718
174 Ga0495684_0061813 3300047471 Bacteria 2849
175 Ga0495686_0093293 3300047472 Bacteria 1825
176 Ga0495593_0011113 3300047673 Bacteria 5179
177 Ga0495602_0003179 3300048088 Bacteria 16943
178 Ga0495602_0053208 3300048088 Bacteria 3587
179 Ga0495614_0001246 3300048089 Bacteria 10948
180 Ga0495614_0056556 3300048089 Bacteria 1683
181 Ga0495626_0007259 3300048091 Bacteria 6186
182 Ga0496109_0005987 3300048912 Bacteria 10216
183 Ga0496113_0120558 3300048916 Bacteria 2050
184 Ga0496114_0004047 3300048917 Bacteria 11324
185 Ga0496114_0071103 3300048917 Bacteria 2923
186 Ga0496115_0024540 3300048918 Bacteria 4688
187 Ga0501031_0035768 3300049568 Bacteria 3240
188 Ga0501031_0040132 3300049568 Bacteria 3056
189 Ga0501032_0009217 3300049569 Bacteria 7157
190 Ga0501032_0020539 3300049569 Bacteria 4596
191 Ga0501032_0126380 3300049569 Bacteria 1689
192 Ga0501033_0000474 3300049570 Bacteria 38029
193 Ga0501033_0101636 3300049570 Bacteria 2097
194 Ga0501034_0000800 3300049571 Bacteria 46777
195 Ga0501034_0025988 3300049571 Bacteria 5964
196 Ga0501034_0043091 3300049571 Bacteria 4568
197 Ga0501034_0060111 3300049571 Bacteria 3817
198 Ga0501036_0000776 3300049572 Bacteria 23673
199 Ga0501036_0189221 3300049572 Bacteria 1732
200 Ga0501037_0074297 3300049573 Bacteria 2470
201 Ga0501037_0102393 3300049573 Bacteria 2065
202 Ga0501038_0000447 3300049574 Bacteria 35997
203 Ga0501038_0068796 3300049574 Bacteria 3009
204 Ga0501038_0113497 3300049574 Bacteria 2242
205 Ga0501039_0019806 3300049575 Bacteria 5158
206 Ga0501043_0014808 3300049579 Bacteria 6106
207 Ga0501043_0051204 3300049579 Bacteria 3245
208 Ga0501046_0036809 3300049580 Bacteria 3936
209 Ga0501047_0000133 3300049581 Bacteria 90926
210 Ga0501047_0022912 3300049581 Bacteria 5995
211 Ga0501047_0062399 3300049581 Bacteria 3595
212 Ga0501047_0076437 3300049581 Bacteria 3222
213 Ga0501048_0039085 3300049582 Bacteria 3404
214 Ga0501067_0005582 3300049583 Bacteria 6976
215 Ga0501068_0013334 3300049584 Bacteria 4674
216 Ga0501070_0000263 3300049586 Bacteria 49655
217 Ga0501070_0161047 3300049586 Bacteria 1850
218 Ga0501071_0017705 3300049587 Bacteria 4919
219 Ga0501072_0035135 3300049588 Bacteria 3928
220 Ga0501074_0001085 3300049590 Bacteria 17746
221 Ga0501080_0029440 3300049742 Bacteria 5112
222 Ga0501080_0094324 3300049742 Bacteria 2779
223 Ga0501083_0031824 3300049744 Bacteria 3619
224 Ga0501035_0006593 3300049822 Bacteria 10870
225 Ga0501035_0037253 3300049822 Bacteria 4405
226 Ga0501035_0042372 3300049822 Bacteria 4105
227 Ga0501035_0056198 3300049822 Bacteria 3512
228 Ga0501035_0069149 3300049822 Bacteria 3130
229 Ga0501035_0102350 3300049822 Bacteria 2512
230 Ga0501044_0001704 3300049823 Bacteria 25802
231 Ga0501044_0017395 3300049823 Bacteria 7712
232 Ga0501044_0026873 3300049823 Bacteria 6091
233 Ga0501045_0045950 3300049824 Bacteria 3179
234 nmdc:mga03n38_10294_c1 3300050490 Bacteria 3433
235 nmdc:mga05p37_34380_c1 3300050507 Bacteria 6209
236 nmdc:mga09592_459_c1 3300050508 Bacteria 30394
237 nmdc:mga0qj67_7711_c1 3300050509 Bacteria 7955
238 nmdc:mga06r32_1120_c1 3300050510 Bacteria 24028
239 nmdc:mga06r32_152_c1 3300050510 Bacteria 52842
240 nmdc:mga08y16_823_c1 3300050511 Bacteria 29766
241 Ga0495601_0015588 3300053077 Bacteria 4594
242 Ga0500610_0026954 3300053079 Bacteria 2881
243 Ga0495619_0009278 3300053085 Bacteria 6212
244 Ga0500640_011729 3300053095 Bacteria 3578
245 Ga0500654_018231 3300053099 Bacteria 4564
246 Ga0500560_001367 3300053107 Bacteria 4194
247 Ga0500614_011030 3300053123 Bacteria 1949
248 Ga0500628_001553 3300053129 Bacteria 3907
249 Ga0500658_0011919 3300053134 Bacteria 3205
250 Ga0500579_025464 3300053143 Bacteria 3818
251 Ga0500600_0006984 3300053149 Bacteria 6767
252 Ga0500656_000170 3300053732 Bacteria 4191
253 Ga0501084_0063343 3300054114 Bacteria 3095
254 Ga0501082_0018301 3300060353 Bacteria 6031
255 Ga0466962_0001173 3300061719 Bacteria 12065
256 Ga0466962_0020408 3300061719 Bacteria 3183
257 2912724461 2912723979 Bacteria 8557534
258 2554258004 2554235005 Bacteria 6457341
259 2585300100 2582581312 Bacteria 7308206
260 2585308624 2582581313 Bacteria 10042643
261 2585318730 2582581314 Bacteria 11452267
262 2616695275 2616644814 Bacteria 11555299
263 2616903950 2616644941 Bacteria 8510691
264 2643948283 2643221587 Bacteria 7586415
265 2644017285 2643221601 Bacteria 7493239
266 2644173754 2643221631 Bacteria 8168043
267 2644264124 2643221647 Bacteria 10741251
268 2644429756 2643221677 Bacteria 7584031
269 2768644648 2767802112 Bacteria 6465194
270 2784588473 2784132148 Bacteria 8627943
271 2785369307 2784746768 Bacteria 10036182
272 2786670445 2786546132 Bacteria 10419719
273 2793979631 2791355406 Bacteria 11364898
274 2799185703 2799112218 Bacteria 4315149
275 2811848829 2808606982 Bacteria 7791042
276 2812358346 2811994879 Bacteria 9313447
277 2819741049 2818991472 Bacteria 10089953
278 2837274425 2837268691 Bacteria 7850704
279 2852636843 2852635781 Bacteria 8251373
280 2862285512 2862281513 Bacteria 9621493
281 2862290727 2862290372 Bacteria 7471434
282 2862515251 2862507626 Bacteria 9425308
283 2867371760 2867369537 Bacteria 6501581
284 2867430148 2867428634 Bacteria 9590268
285 2868091547 2868088558 Bacteria 7609351
286 2912720190 2912715099 Bacteria 9460473
287 2918504391 2918501144 Bacteria 8668083
288 2946067531 2946064051 Bacteria 8957905
289 2947229472 2947224130 Bacteria 9938529
290 2954007633 2954002825 Bacteria 9173742
291 2954386389 2954380949 Bacteria 10050426
292 2954676790 2954673503 Bacteria 9685905
293 2954687376 2954682443 Bacteria 9862841
294 2954697059 2954691527 Bacteria 10720516
295 2954705074 2954701450 Bacteria 10834262
296 2954716372 2954711539 Bacteria 10867210
297 2954726317 2954721474 Bacteria 10456478
298 2954735494 2954731030 Bacteria 10243860
299 2954745241 2954740390 Bacteria 10229294
300 2954754348 2954749733 Bacteria 10366972
301 2954764216 2954759201 Bacteria 9358192
302 2966602688 2966598605 Bacteria 7676064
303 2995465276 2995463766 Bacteria 8577691
304 2995466650 2995463766 Bacteria 8577691
305 3006327039 3006321560 Bacteria 8247479
306 3006428576 3006425503 Bacteria 6491253
307 8008578975 8008574985 Bacteria 7815457
308 8025414350 8025413630 Bacteria 7014048
309 8025480796 8025478263 Bacteria 8209203
310 8047896704 8047893842 Bacteria 11723082
311 8048362218 8048356638 Bacteria 11044339
312 8048373717 8048369669 Bacteria 11666822
313 8048384511 8048379754 Bacteria 11877923
314 8056453364 8056447290 Bacteria 7680491
315 8056671884 8056667051 Bacteria 6953971
316 8056831872 8056829672 Bacteria 9045328
317 Ga0070685_10016820
318 Ga0070698_100010594
319 Ga0068853_100140864
320 Ga0081455_10000030
321 Ga0081455_10085384
322 Ga0075363_100013186
323 Ga0075428_100005979
324 Ga0075431_100002333
325 Ga0075431_100012691
326 Ga0075429_100007915
327 Ga0099826_10040080
328 Ga0111539_10006276
329 Ga0114129_10017779
330 Ga0105239_10076266
331 Ga0105246_10009642
332 Ga0182008_10003143
333 Ga0182007_10001538
334 Ga0183367_1005
335 Ga0209758_1004057
336 Ga0207647_10002532
337 Ga0209371_1006197
338 Ga0207428_10003898
339 Ga0307517_10006259
340 Ga0307515_10000054
341 Ga0307515_10021567
342 Ga0268256_1012004
343 Ga0307511_10000604
344 Ga0307513_10007543
345 Ga0307509_10011255
346 Ga0307508_10006194
347 Ga0307508_10011693
348 Ga0307508_10024455
349 Ga0307508_10043908
350 Ga0307514_10004003
351 Ga0307516_10008824
352 Ga0307516_10024088
353 Ga0307516_10082719
354 Ga0307507_10025619
355 Ga0307507_10102167
356 Ga0307510_10004987
357 Ga0307510_10027952
358 Ga0307510_10163927
359 Ga0395898_0051007
360 Ga0395901_0020579
361 Ga0439436_0008465
362 Ga0439439_0000895
363 Ga0439448_0012109
364 Ga0439449_0000256
365 Ga0439449_0005123
366 Ga0439457_003164
367 Ga0439462_0001669
368 Ga0450903_000058
369 Ga0439458_0000135
370 Ga0450901_003252
371 Ga0466969_0002927
372 Ga0466969_0028548
373 Ga0466972_0004902
374 Ga0466972_0010834
375 Ga0466972_0022230
376 Ga0466966_0000415
377 Ga0466966_0006723
378 Ga0466961_0001528
379 Ga0466961_0008281
380 Ga0466961_0008634
381 Ga0466963_0000217
382 Ga0466963_0030281
383 Ga0466964_0002396
384 Ga0466971_0000287
385 Ga0466971_0003517
386 Ga0466970_0000305
387 Ga0466970_0003749
388 Ga0466957_0001585
389 Ga0466957_0033160
390 Ga0466960_0003038
391 Ga0466959_0004143
392 Ga0466959_0004812
393 Ga0466959_0056825
394 Ga0466958_0001065
395 Ga0466958_0023720
396 Ga0466967_0001874
397 Ga0466967_0005254
398 Ga0495592_0014054
399 Ga0495603_0000665
400 Ga0495603_0001471
401 Ga0495603_0011984
402 Ga0495603_0040525
403 Ga0495629_0001012
404 Ga0495629_0004047
405 Ga0495629_0007929
406 Ga0495629_0017191
407 Ga0495629_0118770
408 Ga0495651_0007922
409 Ga0495651_0010764
410 Ga0495653_0004845
411 Ga0495580_0015819
412 Ga0495605_0035494
413 Ga0495662_0000249
414 Ga0495662_0000375
415 Ga0495662_0030687
416 Ga0495664_0001997
417 Ga0495584_0016013
418 Ga0495594_0000331
419 Ga0495594_0013675
420 Ga0495594_0049986
421 Ga0495596_0017658
422 Ga0495606_0059385
423 Ga0495608_0019358
424 Ga0495616_0023472
425 Ga0495620_0023938
426 Ga0495628_0005407
427 Ga0495628_0101132
428 Ga0495631_0007300
429 Ga0495632_0041155
430 Ga0495643_0001988
431 Ga0495643_0007042
432 Ga0495666_0018864
433 Ga0495652_0021580
434 Ga0495652_0030706
435 Ga0495652_0035098
436 Ga0495654_0020879
437 Ga0495640_0007014
438 Ga0495640_0011383
439 Ga0495587_0006746
440 Ga0495609_0002415
441 Ga0495597_0015524
442 Ga0495645_0002808
443 Ga0495622_0003432
444 Ga0495622_0034219
445 Ga0495633_0036958
446 Ga0495668_0011935
447 Ga0495634_0005786
448 Ga0495634_0008799
449 Ga0495611_0032025
450 Ga0495625_0005302
451 Ga0495635_0020053
452 Ga0495635_0027561
453 Ga0495635_0095651
454 Ga0495588_0006081
455 Ga0495657_0006921
456 Ga0495657_0077129
457 Ga0495623_0014495
458 Ga0495646_0000598
459 Ga0495658_0046164
460 Ga0495613_0007853
461 Ga0495613_0032458
462 Ga0495613_0043980
463 Ga0495613_0048367
464 Ga0495624_0011408
465 Ga0495671_0002477
466 Ga0495671_0061434
467 Ga0495649_0013753
468 Ga0495649_0080117
469 Ga0495600_0027905
470 Ga0495660_0011248
471 Ga0495581_0009930
472 Ga0495604_0000786
473 Ga0495604_0001175
474 Ga0495604_0002805
475 Ga0495636_0035761
476 Ga0495674_0169077
477 Ga0495672_0071823
478 Ga0495676_0001924
479 Ga0495676_0005915
480 Ga0495676_0015783
481 Ga0495680_0026484
482 Ga0495687_001705
483 Ga0495687_017528
484 Ga0495675_0002643
485 Ga0495685_000281
486 Ga0495685_007402
487 Ga0495681_0000252
488 Ga0495681_0017157
489 Ga0495681_0019369
490 Ga0495684_0061813
491 Ga0495686_0093293
492 Ga0495593_0011113
493 Ga0495602_0003179
494 Ga0495602_0053208
495 Ga0495614_0001246
496 Ga0495614_0056556
497 Ga0495626_0007259
498 Ga0496109_0005987
499 Ga0496113_0120558
500 Ga0496114_0004047
501 Ga0496114_0071103
502 Ga0496115_0024540
503 Ga0501031_0035768
504 Ga0501031_0040132
505 Ga0501032_0009217
506 Ga0501032_0020539
507 Ga0501032_0126380
508 Ga0501033_0000474
509 Ga0501033_0101636
510 Ga0501034_0000800
511 Ga0501034_0025988
512 Ga0501034_0043091
513 Ga0501034_0060111
514 Ga0501036_0000776
515 Ga0501036_0189221
516 Ga0501037_0074297
517 Ga0501037_0102393
518 Ga0501038_0000447
519 Ga0501038_0068796
520 Ga0501038_0113497
521 Ga0501039_0019806
522 Ga0501043_0014808
523 Ga0501043_0051204
524 Ga0501046_0036809
525 Ga0501047_0000133
526 Ga0501047_0022912
527 Ga0501047_0062399
528 Ga0501047_0076437
529 Ga0501048_0039085
530 Ga0501067_0005582
531 Ga0501068_0013334
532 Ga0501070_0000263
533 Ga0501070_0161047
534 Ga0501071_0017705
535 Ga0501072_0035135
536 Ga0501074_0001085
537 Ga0501080_0029440
538 Ga0501080_0094324
539 Ga0501083_0031824
540 Ga0501035_0006593
541 Ga0501035_0037253
542 Ga0501035_0042372
543 Ga0501035_0056198
544 Ga0501035_0069149
545 Ga0501035_0102350
546 Ga0501044_0001704
547 Ga0501044_0017395
548 Ga0501044_0026873
549 Ga0501045_0045950
550 nmdc:mga03n38_10294_c1
551 nmdc:mga05p37_34380_c1
552 nmdc:mga09592_459_c1
553 nmdc:mga0qj67_7711_c1
554 nmdc:mga06r32_1120_c1
555 nmdc:mga06r32_152_c1
556 nmdc:mga08y16_823_c1
557 Ga0495601_0015588
558 Ga0500610_0026954
559 Ga0495619_0009278
560 Ga0500640_011729
561 Ga0500654_018231
562 Ga0500560_001367
563 Ga0500614_011030
564 Ga0500628_001553
565 Ga0500658_0011919
566 Ga0500579_025464
567 Ga0500600_0006984
568 Ga0500656_000170
569 Ga0501084_0063343
570 Ga0501082_0018301
571 Ga0466962_0001173
572 Ga0466962_0020408
573 2912724461
574 2554258004
575 2585300100
576 2585308624
577 2585318730
578 2616695275
579 2616903950
580 2643948283
581 2644017285
582 2644173754
583 2644264124
584 2644429756
585 2768644648
586 2784588473
587 2785369307
588 2786670445
589 2793979631
590 2799185703
591 2811848829
592 2812358346
593 2819741049
594 2837274425
595 2852636843
596 2862285512
597 2862290727
598 2862515251
599 2867371760
600 2867430148
601 2868091547
602 2912720190
603 2918504391
604 2946067531
605 2947229472
606 2954007633
607 2954386389
608 2954676790
609 2954687376
610 2954697059
611 2954705074
612 2954716372
613 2954726317
614 2954735494
615 2954745241
616 2954754348
617 2954764216
618 2966602688
619 2995465276
620 2995466650
621 3006327039
622 3006428576
623 8008578975
624 8025414350
625 8025480796
626 8047896704
627 8048362218
628 8048373717
629 8048384511
630 8056453364
631 8056671884
632 8056831872

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00999

Na_H_Exchanger

Sodium/hydrogen exchanger family

39

410

0.93

PF02080

TrkA_C

TrkA-C domain

436

504

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3l4b-assembly1.cif.gz_D crystal structure of an octomeric two-subunit trka k+ channel ring gating assembly, tm1088a:tm1088b, from thermotoga maritima 0.944 359 429
3l4b-assembly1.cif.gz_G crystal structure of an octomeric two-subunit trka k+ channel ring gating assembly, tm1088a:tm1088b, from thermotoga maritima 0.9157 354 429
3jxo-assembly1.cif.gz_B crystal structure of an octomeric two-subunit trka k+ channel ring gating assembly, tm1088a:tm1088b, from thermotoga maritima 0.9111 360 428
4j9u-assembly2.cif.gz_G crystal structure of the trkh/trka potassium transport complex 0.8308 359 426
6v4k-assembly1.cif.gz_E structure of trkh-trka in complex with adp 0.8273 360 426
ID Description Score Start End Superfamily
af_P76007_411_484_3.30.70.1450 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Regulator of K+ conductance, C-terminal domain 0.9183 360 420 3.30.70.1450
3jxoA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Regulator of K+ conductance, C-terminal domain 0.9115 358 428 3.30.70.1450
af_P9WFZ3_136_217_3.30.70.1450 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Regulator of K+ conductance, C-terminal domain 0.9073 359 429 3.30.70.1450
af_P76007_6_393_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.8635 2 339 1.20.1530.20
af_O05882_87_159_3.30.70.1450 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Regulator of K+ conductance, C-terminal domain 0.838 363 428 3.30.70.1450
ID Description Score Start End GO Terms
AF-A0A1F5YMQ3-F1-model_v4 Trk system potassium uptake protein TrkA 0.9291 359 428 GO:0005886
GO:0015079
AF-A0A4Q8TI41-F1-model_v4 Trk system potassium uptake protein TrkA 0.9254 355 430 GO:0005886
GO:0015079
AF-A0A645FTH6-F1-model_v4 RCK C-terminal domain-containing protein 0.9203 359 428 GO:0006813
GO:0008324
AF-A0A381YMJ4-F1-model_v4 Trk system potassium uptake protein TrkA 0.9154 359 427 GO:0005886
GO:0015079
AF-A0A645G9S4-F1-model_v4 RCK C-terminal domain-containing protein 0.9099 360 419 GO:0006813
GO:0008324

Map