F403673

General Info

Members Datasets Scaffolds Average Seq Length
316 238 632 503

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10267618|Ga0105239_102676181
Length 555
Sequence LLLPRAKCDFSKITLSLQLFVLTRFLSRKAYQLFGKRLGTFQLDVVMQIVPKTARTLRLNARDNVLVAIDVIEPGAEVEGVAALQRVPKGHKIAVAPIGEGEPIVKFGQIIGFASQAIVPGSHVHSHNCEFHAFERDYAFAQDARQEAILPLDSQATFQGYRRPNGKAGTRNYVAILTSVNCSASVARFMADAFNQSGMLADYPNIDGVVPFVHGTGCGMADKGEGFEIMKRTQWGYASNPNIAAVLLVGLGCEVFQIGRMKSEYGIVEGDHFQTMTIQDTGGTRKTIEQGMERIKAMLPLANQARRETIPASELILALQCGGSDGYSGISANPALGAAADMLVHQGGTAILSETPEIYGAEHLLTRRAASREVGEKLVERIKWWEEYTAKNNGSMDNNPSPGNKAGGLTTILEKSLGAAAKGGTTTLTAVYEYAEPVKEKGFVFMDTPGYDPVSATGQVAGGANVLCFTTGRGSAYGCKPTPSIKLATNSDIYRRMQDDMDINCGDVLEGVSIEEKGKEIFDKILAVASGAKSKSEELGYGSNEFVPWQVGATM

Samples

Sample ID Description Type Environment
1 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
40 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
41 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
59 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
60 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
61 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
63 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
64 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
93 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
94 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
95 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
96 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
97 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
98 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
99 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
100 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
101 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
102 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
103 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
104 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
105 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
106 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
107 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
108 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
109 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
110 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
111 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
112 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
113 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
114 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
115 3300042124 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_082716_2423 Metagenome Rhizosphere
116 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
117 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
118 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
119 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
120 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
121 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
122 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
123 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
124 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
125 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
126 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
127 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
128 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
129 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
130 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
131 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
132 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
133 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
134 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
135 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
136 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
137 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
138 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
139 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
140 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
141 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
142 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
143 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
144 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
145 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
146 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
147 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
148 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
149 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
150 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
151 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
152 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
153 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
154 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
155 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
156 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
157 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
158 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
159 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
160 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
161 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
162 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
163 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
164 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
165 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
166 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
167 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
168 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
181 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
182 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
183 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
184 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
185 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
186 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
187 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
188 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
189 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
190 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
191 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
192 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
194 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
195 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
196 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
197 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
198 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
199 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
200 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
201 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
202 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
203 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
204 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
205 2511231004 Pseudomonas sp. GM102 Isolate Nodule
206 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
207 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
208 2643221674 Devosia sp. Root436 Isolate Unclassified
209 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
210 2738543024 Aminobacter sp. AP02 Isolate Unclassified
211 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
212 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
213 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
214 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
215 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
216 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
217 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
218 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
219 2808606394 Promicromonospora sp. C35 Isolate Unclassified
220 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
221 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
222 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
223 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
224 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
225 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
226 2904578770 Phyllobacterium sp. 586 Isolate Unclassified
227 2909042592 Labrys sp. LIt4 Isolate Nodule
228 2919063839 Pseudomonas pharyngis 1098 Isolate Rhizosphere
229 2919119836 Phyllobacterium sp. 1468 Isolate Rhizosphere
230 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
231 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
232 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
233 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
234 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified
235 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified
236 8054929484 Pseudomonas vlassakiae RW4S1 Isolate Rhizosphere
237 8056137416 Pseudomonas fakonensis COW40 Isolate Rhizosphere
238 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.61
Metatranscriptomes 0
Isolates 11.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.7
Nodule 1.9
Rhizoplane 6.01
Rhizosphere 72.15
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105239_10267618 3300010375 Bacteria 1922
2 JGI25165J46597_1000066 3300003214 Bacteria 199459
3 JGI25153J46596_10000679 3300003215 Bacteria 20744
4 Ga0055536_1006200 3300003781 Bacteria 5647
5 Ga0070676_10083209 3300005328 Bacteria 1946
6 Ga0070677_10010690 3300005333 Bacteria 3145
7 Ga0068869_100057954 3300005334 Bacteria 2830
8 Ga0070666_10003177 3300005335 Bacteria 9981
9 Ga0070666_10079512 3300005335 Bacteria 2239
10 Ga0068868_100044177 3300005338 Bacteria 3483
11 Ga0070660_100047988 3300005339 Bacteria 3279
12 Ga0070661_100030496 3300005344 Bacteria 3896
13 Ga0070668_100002470 3300005347 Bacteria 13615
14 Ga0070671_100055271 3300005355 Bacteria 3303
15 Ga0070671_100169037 3300005355 Bacteria 1849
16 Ga0070673_100081157 3300005364 Bacteria 2629
17 Ga0070659_100012186 3300005366 Bacteria 6373
18 Ga0070713_100081777 3300005436 Bacteria 2757
19 Ga0070713_100172389 3300005436 Bacteria 1939
20 Ga0070678_100011832 3300005456 Bacteria 5398
21 Ga0070678_100033018 3300005456 Bacteria 3588
22 Ga0068867_100022796 3300005459 Bacteria 4480
23 Ga0070699_100000628 3300005518 Bacteria 33162
24 Ga0070679_100017009 3300005530 Bacteria 7029
25 Ga0070684_100130123 3300005535 Bacteria 2270
26 Ga0070672_100117555 3300005543 Bacteria 2174
27 Ga0070695_100030565 3300005545 Bacteria 3355
28 Ga0070665_100000366 3300005548 Bacteria 67633
29 Ga0070665_100010636 3300005548 Bacteria 9313
30 Ga0070665_100037319 3300005548 Bacteria 4887
31 Ga0068852_100075091 3300005616 Bacteria 2980
32 Ga0068859_100082743 3300005617 Bacteria 3252
33 Ga0068864_100049856 3300005618 Bacteria 3603
34 Ga0081540_1009236 3300005983 Bacteria 6800
35 Ga0081540_1017805 3300005983 Bacteria 4385
36 Ga0081539_10003922 3300005985 Bacteria 17277
37 Ga0081539_10063400 3300005985 Bacteria 2017
38 Ga0070717_10199061 3300006028 Bacteria 1754
39 Ga0075364_10017423 3300006051 Bacteria 4487
40 Ga0075362_10012671 3300006177 Bacteria 3356
41 Ga0075367_10057977 3300006178 Bacteria 2303
42 Ga0075366_10000625 3300006195 Bacteria 16631
43 Ga0097621_100000074 3300006237 Bacteria 51891
44 Ga0097621_100009806 3300006237 Bacteria 6972
45 Ga0097621_100037574 3300006237 Bacteria 3882
46 Ga0068871_100000173 3300006358 Bacteria 43382
47 Ga0068865_100059759 3300006881 Bacteria 2667
48 Ga0097620_100082748 3300006931 Bacteria 3252
49 Ga0099826_10000059 3300006948 Bacteria 63493
50 Ga0105251_10008941 3300009011 Bacteria 5986
51 Ga0105250_10003451 3300009092 Bacteria 7485
52 Ga0105240_10026525 3300009093 Bacteria 7602
53 Ga0105240_10288723 3300009093 Bacteria 1881
54 Ga0105245_10033991 3300009098 Bacteria 4519
55 Ga0114129_10081984 3300009147 Bacteria 4483
56 Ga0105241_10003951 3300009174 Bacteria 10966
57 Ga0105241_10023852 3300009174 Bacteria 4539
58 Ga0105242_10026846 3300009176 Bacteria 4566
59 Ga0105242_10129010 3300009176 Bacteria 2180
60 Ga0105248_10041754 3300009177 Bacteria 5143
61 Ga0105237_10040346 3300009545 Bacteria 4708
62 Ga0105238_10086475 3300009551 Bacteria 3123
63 Ga0105246_10001985 3300011119 Bacteria 12340
64 Ga0157369_10187681 3300013105 Bacteria 2173
65 Ga0157374_10010252 3300013296 Bacteria 8058
66 Ga0157374_10020146 3300013296 Bacteria 5913
67 Ga0157374_10021336 3300013296 Bacteria 5762
68 Ga0163162_10017637 3300013306 Bacteria 6984
69 Ga0163162_10025485 3300013306 Bacteria 5844
70 Ga0163163_10002114 3300014325 Bacteria 16763
71 Ga0157380_10115326 3300014326 Bacteria 2265
72 Ga0157379_10011937 3300014968 Bacteria 7591
73 Ga0157379_10013299 3300014968 Bacteria 7207
74 Ga0157376_10053565 3300014969 Bacteria 3360
75 Ga0213876_10000776 3300021384 Bacteria 21862
76 Ga0213876_10001515 3300021384 Bacteria 14376
77 Ga0213875_10011549 3300021388 Bacteria 4392
78 Ga0209233_1000045 3300025261 Bacteria 473379
79 Ga0209676_1000092 3300025292 Bacteria 250453
80 Ga0209025_1001342 3300025294 Bacteria 33181
81 Ga0209758_1000008 3300025297 Bacteria 1215263
82 Ga0207696_1006208 3300025711 Bacteria 4847
83 Ga0207713_1008979 3300025735 Bacteria 5685
84 Ga0207682_10002344 3300025893 Bacteria 8541
85 Ga0207654_10001200 3300025911 Bacteria 13892
86 Ga0207654_10121018 3300025911 Bacteria 1643
87 Ga0207707_10052550 3300025912 Bacteria 3547
88 Ga0207707_10066573 3300025912 Bacteria 3138
89 Ga0207695_10020455 3300025913 Bacteria 7578
90 Ga0207695_10112011 3300025913 Bacteria 2707
91 Ga0207649_10009849 3300025920 Bacteria 5239
92 Ga0207694_10073383 3300025924 Bacteria 2677
93 Ga0207659_10090577 3300025926 Bacteria 2283
94 Ga0207687_10006947 3300025927 Bacteria 7457
95 Ga0207700_10032862 3300025928 Bacteria 3706
96 Ga0207700_10200687 3300025928 Bacteria 1681
97 Ga0207664_10019459 3300025929 Bacteria 5019
98 Ga0207644_10128529 3300025931 Bacteria 1937
99 Ga0207686_10047448 3300025934 Bacteria 2655
100 Ga0207686_10065412 3300025934 Bacteria 2319
101 Ga0207709_10001462 3300025935 Bacteria 16434
102 Ga0207669_10046108 3300025937 Bacteria 2573
103 Ga0207704_10003636 3300025938 Bacteria 7002
104 Ga0207691_10197977 3300025940 Bacteria 1749
105 Ga0207689_10078810 3300025942 Bacteria 2708
106 Ga0207667_10084315 3300025949 Bacteria 3290
107 Ga0207668_10018294 3300025972 Bacteria 4406
108 Ga0207677_10060410 3300026023 Bacteria 2620
109 Ga0207703_10082798 3300026035 Bacteria 2679
110 Ga0207648_10003173 3300026089 Bacteria 17320
111 Ga0207648_10027319 3300026089 Bacteria 5067
112 Ga0207683_10001401 3300026121 Bacteria 21763
113 Ga0207683_10018280 3300026121 Bacteria 5980
114 Ga0207698_10020794 3300026142 Bacteria 4525
115 Ga0207698_10121623 3300026142 Bacteria 2211
116 Ga0209282_1016880 3300027666 Bacteria 4643
117 Ga0268266_10000861 3300028379 Bacteria 39497
118 Ga0268266_10006629 3300028379 Bacteria 10563
119 Ga0265318_10005322 3300028577 Bacteria 6049
120 Ga0307517_10117706 3300028786 Bacteria 1982
121 Ga0265338_10003550 3300028800 Bacteria 21798
122 Ga0265332_10010643 3300031238 Bacteria 4093
123 Ga0265320_10041447 3300031240 Bacteria 2289
124 Ga0265331_10025997 3300031250 Bacteria 2950
125 Ga0307513_10004297 3300031456 Bacteria 19041
126 Ga0265313_10001435 3300031595 Bacteria 22271
127 Ga0265313_10002502 3300031595 Bacteria 15819
128 Ga0265314_10027225 3300031711 Bacteria 4283
129 Ga0265314_10064385 3300031711 Bacteria 2482
130 Ga0265314_10066663 3300031711 Bacteria 2427
131 Ga0307413_10055122 3300031824 Bacteria 2417
132 Ga0307415_100012030 3300032126 Bacteria 4986
133 Ga0373942_0027727 3300035207 Bacteria 1476
134 Ga0316582_0082160 3300036647 Bacteria 2106
135 Ga0316584_0047314 3300036712 Bacteria 3213
136 Ga0436364_0704354 3300037853 Bacteria 3180
137 Ga0436364_1428481 3300037853 Bacteria 4203
138 Ga0436365_0740315 3300039437 Bacteria 4124
139 Ga0436365_0806562 3300039437 Bacteria 4431
140 Ga0436365_0837646 3300039437 Bacteria 24635
141 Ga0436365_1672037 3300039437 Bacteria 20539
142 Ga0436360_0117595 3300039438 Bacteria 3063
143 Ga0436360_0928848 3300039438 Bacteria 2874
144 Ga0436360_1230647 3300039438 Bacteria 2999
145 Ga0436361_0057351 3300039447 Bacteria 2856
146 Ga0436361_0484186 3300039447 Bacteria 3793
147 Ga0436363_0610096 3300039450 Bacteria 8494
148 Ga0436363_0926061 3300039450 Bacteria 7733
149 Ga0436362_0446129 3300039453 Bacteria 10951
150 Ga0436362_0591304 3300039453 Bacteria 2253
151 Ga0451837_1249947 3300041494 Bacteria 2832
152 Ga0439431_0025218 3300041997 Bacteria 1451
153 Ga0450920_000034 3300042122 Bacteria 16144
154 Ga0450922_001275 3300042124 Bacteria 2494
155 Ga0450902_000424 3300042137 Bacteria 5194
156 Ga0450905_000694 3300042142 Bacteria 4116
157 Ga0450907_000040 3300042146 Bacteria 56917
158 Ga0450910_000005 3300042147 Bacteria 55333
159 Ga0450908_000239 3300042184 Bacteria 11030
160 Ga0450901_000200 3300042533 Bacteria 7113
161 Ga0466966_0019885 3300044684 Bacteria 4416
162 Ga0466959_0012416 3300045049 Bacteria 6155
163 Ga0451576_0006175 3300045051 Bacteria 14753
164 Ga0451576_0041999 3300045051 Bacteria 4829
165 Ga0466967_0032106 3300045976 Bacteria 4430
166 Ga0495585_0002798 3300046492 Bacteria 12149
167 Ga0495607_0038718 3300046501 Bacteria 2854
168 Ga0495616_0005084 3300046513 Bacteria 8179
169 Ga0495631_0052288 3300046518 Bacteria 1784
170 Ga0495632_0000037 3300046519 Bacteria 158699
171 Ga0495632_0001008 3300046519 Bacteria 24426
172 Ga0495637_0000073 3300046520 Bacteria 81803
173 Ga0495637_0002529 3300046520 Bacteria 10081
174 Ga0495643_0015805 3300046522 Bacteria 4449
175 Ga0495644_0026537 3300046523 Bacteria 2197
176 Ga0495654_0001087 3300046530 Bacteria 19760
177 Ga0495609_0036297 3300046538 Bacteria 2226
178 Ga0495621_0006560 3300046539 Bacteria 3405
179 Ga0495622_0006917 3300046557 Bacteria 5267
180 Ga0495668_0062247 3300046616 Bacteria 2056
181 Ga0495611_0030473 3300046648 Bacteria 2372
182 Ga0495661_0003305 3300046665 Bacteria 11956
183 Ga0495661_0003813 3300046665 Bacteria 11035
184 Ga0495671_0000560 3300046692 Bacteria 27925
185 Ga0495671_0001098 3300046692 Bacteria 18704
186 Ga0495589_0012727 3300046794 Bacteria 4349
187 Ga0495636_0045897 3300047318 Bacteria 1822
188 Ga0495683_0000868 3300047323 Bacteria 21361
189 Ga0495683_0015053 3300047323 Bacteria 4029
190 Ga0495687_005857 3300047443 Bacteria 7694
191 Ga0495679_001016 3300047446 Bacteria 17222
192 Ga0495673_0000221 3300047469 Bacteria 84565
193 Ga0495602_0049013 3300048088 Bacteria 3788
194 Ga0496100_0031518 3300048903 Bacteria 3297
195 Ga0496102_0051492 3300048905 Bacteria 3751
196 Ga0496104_0002651 3300048907 Bacteria 15403
197 Ga0496104_0021917 3300048907 Bacteria 5868
198 Ga0496104_0105966 3300048907 Bacteria 2694
199 Ga0496105_0001775 3300048908 Bacteria 15414
200 Ga0496105_0066975 3300048908 Bacteria 2965
201 Ga0496108_0000585 3300048911 Bacteria 28495
202 Ga0496109_0000377 3300048912 Bacteria 40679
203 Ga0496110_0033348 3300048913 Bacteria 4453
204 Ga0496111_0121319 3300048914 Bacteria 1930
205 Ga0496112_0001873 3300048915 Bacteria 16586
206 Ga0496113_0000368 3300048916 Bacteria 21718
207 Ga0496115_0006076 3300048918 Bacteria 8819
208 Ga0496115_0013998 3300048918 Bacteria 6072
209 Ga0496116_0095885 3300048919 Bacteria 1789
210 Ga0496119_0003746 3300048922 Bacteria 15556
211 Ga0496119_0005252 3300048922 Bacteria 12484
212 Ga0496121_0109078 3300048924 Bacteria 2116
213 Ga0496122_0005183 3300048925 Bacteria 15671
214 Ga0496122_0008680 3300048925 Bacteria 10895
215 Ga0496123_0001148 3300048926 Bacteria 39511
216 Ga0496123_0007882 3300048926 Bacteria 9898
217 Ga0496125_0017665 3300048928 Bacteria 6791
218 Ga0496126_0057174 3300048929 Bacteria 3523
219 Ga0496126_0088113 3300048929 Bacteria 2735
220 Ga0495682_0000379 3300049460 Bacteria 32202
221 Ga0501033_0022576 3300049570 Bacteria 4747
222 Ga0501033_0024079 3300049570 Bacteria 4594
223 Ga0501033_0119917 3300049570 Bacteria 1910
224 Ga0501034_0000611 3300049571 Bacteria 56186
225 Ga0501034_0045543 3300049571 Bacteria 4432
226 Ga0501036_0172804 3300049572 Bacteria 1820
227 Ga0501038_0015711 3300049574 Bacteria 6880
228 Ga0501039_0007916 3300049575 Bacteria 8100
229 Ga0501040_0004867 3300049576 Bacteria 8695
230 Ga0501041_0009321 3300049577 Bacteria 5781
231 Ga0501041_0057252 3300049577 Bacteria 2384
232 Ga0501042_0012238 3300049578 Bacteria 5806
233 Ga0501042_0015640 3300049578 Bacteria 5196
234 Ga0501043_0008696 3300049579 Bacteria 7989
235 Ga0501043_0067691 3300049579 Bacteria 2804
236 Ga0501046_0006017 3300049580 Bacteria 10790
237 Ga0501046_0011248 3300049580 Bacteria 7661
238 Ga0501046_0142732 3300049580 Bacteria 1811
239 Ga0501047_0002896 3300049581 Bacteria 16274
240 Ga0501047_0048308 3300049581 Bacteria 4109
241 Ga0501047_0050354 3300049581 Bacteria 4022
242 Ga0501048_0008292 3300049582 Bacteria 7861
243 Ga0501067_0002820 3300049583 Bacteria 9562
244 Ga0501069_0002645 3300049585 Bacteria 9145
245 Ga0501071_0134560 3300049587 Bacteria 1838
246 Ga0501072_0019507 3300049588 Bacteria 5243
247 Ga0501073_0019988 3300049589 Bacteria 4829
248 Ga0501075_0069615 3300049591 Bacteria 2659
249 Ga0501075_0127425 3300049591 Bacteria 1938
250 Ga0501076_0006977 3300049592 Bacteria 8212
251 Ga0501076_0045555 3300049592 Bacteria 3463
252 Ga0501076_0240237 3300049592 Bacteria 1482
253 Ga0501077_0014158 3300049593 Bacteria 5006
254 Ga0501238_001264 3300049671 Bacteria 2903
255 Ga0501252_001136 3300049682 Bacteria 2367
256 Ga0501079_0004255 3300049741 Bacteria 10617
257 Ga0501079_0062279 3300049741 Bacteria 2878
258 Ga0501081_0000483 3300049743 Bacteria 22159
259 Ga0501081_0032295 3300049743 Bacteria 3551
260 Ga0501035_0005839 3300049822 Bacteria 11608
261 Ga0501035_0007180 3300049822 Bacteria 10424
262 Ga0501035_0023526 3300049822 Bacteria 5652
263 Ga0501035_0071388 3300049822 Bacteria 3074
264 Ga0501044_0020762 3300049823 Bacteria 7009
265 Ga0501044_0088518 3300049823 Bacteria 3125
266 Ga0501045_0005798 3300049824 Bacteria 8547
267 nmdc:mga00v17_4025_c2 3300050491 Bacteria 4609
268 nmdc:mga00v17_48540_c1 3300050491 Bacteria 2573
269 nmdc:mga0k408_2143_c1 3300050493 Bacteria 10581
270 nmdc:mga05p37_90226_c1 3300050507 Bacteria 3777
271 Ga0500643_000006 3300053087 Bacteria 479605
272 Ga0500556_0000022 3300053104 Bacteria 174894
273 Ga0500568_0034183 3300053139 Bacteria 2081
274 Ga0500573_0000009 3300053140 Bacteria 230823
275 Ga0501084_0002763 3300054114 Bacteria 14169
276 Ga0501084_0004951 3300054114 Bacteria 10888
277 Ga0501082_0001434 3300060353 Bacteria 20937
278 Ga0501082_0016975 3300060353 Bacteria 6268
279 Ga0530510_0005417 3300061734 Bacteria 8834
280 Ga0530510_0179222 3300061734 Bacteria 1571
281 2511254192 2511231004 Bacteria 6669789
282 2511254201 2511231004 Bacteria 6669789
283 2601611119 2600255279 Bacteria 5605316
284 2601747892 2600255308 Bacteria 5611129
285 2644412975 2643221674 Bacteria 3919126
286 2738694015 2738541272 Bacteria 6848551
287 2739306941 2738543024 Bacteria 5603683
288 2739327400 2738543027 Bacteria 6409078
289 2739607179 2739367654 Bacteria 6049412
290 2760304912 2758568522 Bacteria 5953541
291 2760621255 2758568621 Bacteria 5967089
292 2765465850 2765235802 Bacteria 5618596
293 2770196429 2767802442 Bacteria 5747986
294 2776269434 2775506902 Bacteria 6208009
295 2776282364 2775506904 Bacteria 5954060
296 2809026052 2808606394 Bacteria 6248540
297 2835188841 2835188231 Bacteria 3476928
298 2839986533 2839986021 Bacteria 3685650
299 2839993496 2839993093 Bacteria 5512535
300 2840766506 2840764183 Bacteria 6358399
301 2842875088 2842871566 Bacteria 4827117
302 2894653538 2894652903 Bacteria 4587256
303 2904579857 2904578770 Bacteria 5302906
304 2909044079 2909042592 Bacteria 6499737
305 2919068074 2919063839 Bacteria 6302690
306 2919120473 2919119836 Bacteria 5208557
307 2928522633 2928521798 Bacteria 4960112
308 2933598204 2933594066 Bacteria 5594265
309 2954013986 2954011201 Bacteria 4762601
310 3002141848 3002141150 Bacteria 5254435
311 8045867993 8045864390 Bacteria 5043873
312 8054563920 8054563764 Bacteria 5592885
313 8054564385 8054563764 Bacteria 5592885
314 8054930392 8054929484 Bacteria 5599761
315 8056140000 8056137416 Bacteria 6147080
316 8056579842 8056579771 Bacteria 5840325
317 Ga0105239_10267618
318 JGI25165J46597_1000066
319 JGI25153J46596_10000679
320 Ga0055536_1006200
321 Ga0070676_10083209
322 Ga0070677_10010690
323 Ga0068869_100057954
324 Ga0070666_10003177
325 Ga0070666_10079512
326 Ga0068868_100044177
327 Ga0070660_100047988
328 Ga0070661_100030496
329 Ga0070668_100002470
330 Ga0070671_100055271
331 Ga0070671_100169037
332 Ga0070673_100081157
333 Ga0070659_100012186
334 Ga0070713_100081777
335 Ga0070713_100172389
336 Ga0070678_100011832
337 Ga0070678_100033018
338 Ga0068867_100022796
339 Ga0070699_100000628
340 Ga0070679_100017009
341 Ga0070684_100130123
342 Ga0070672_100117555
343 Ga0070695_100030565
344 Ga0070665_100000366
345 Ga0070665_100010636
346 Ga0070665_100037319
347 Ga0068852_100075091
348 Ga0068859_100082743
349 Ga0068864_100049856
350 Ga0081540_1009236
351 Ga0081540_1017805
352 Ga0081539_10003922
353 Ga0081539_10063400
354 Ga0070717_10199061
355 Ga0075364_10017423
356 Ga0075362_10012671
357 Ga0075367_10057977
358 Ga0075366_10000625
359 Ga0097621_100000074
360 Ga0097621_100009806
361 Ga0097621_100037574
362 Ga0068871_100000173
363 Ga0068865_100059759
364 Ga0097620_100082748
365 Ga0099826_10000059
366 Ga0105251_10008941
367 Ga0105250_10003451
368 Ga0105240_10026525
369 Ga0105240_10288723
370 Ga0105245_10033991
371 Ga0114129_10081984
372 Ga0105241_10003951
373 Ga0105241_10023852
374 Ga0105242_10026846
375 Ga0105242_10129010
376 Ga0105248_10041754
377 Ga0105237_10040346
378 Ga0105238_10086475
379 Ga0105246_10001985
380 Ga0157369_10187681
381 Ga0157374_10010252
382 Ga0157374_10020146
383 Ga0157374_10021336
384 Ga0163162_10017637
385 Ga0163162_10025485
386 Ga0163163_10002114
387 Ga0157380_10115326
388 Ga0157379_10011937
389 Ga0157379_10013299
390 Ga0157376_10053565
391 Ga0213876_10000776
392 Ga0213876_10001515
393 Ga0213875_10011549
394 Ga0209233_1000045
395 Ga0209676_1000092
396 Ga0209025_1001342
397 Ga0209758_1000008
398 Ga0207696_1006208
399 Ga0207713_1008979
400 Ga0207682_10002344
401 Ga0207654_10001200
402 Ga0207654_10121018
403 Ga0207707_10052550
404 Ga0207707_10066573
405 Ga0207695_10020455
406 Ga0207695_10112011
407 Ga0207649_10009849
408 Ga0207694_10073383
409 Ga0207659_10090577
410 Ga0207687_10006947
411 Ga0207700_10032862
412 Ga0207700_10200687
413 Ga0207664_10019459
414 Ga0207644_10128529
415 Ga0207686_10047448
416 Ga0207686_10065412
417 Ga0207709_10001462
418 Ga0207669_10046108
419 Ga0207704_10003636
420 Ga0207691_10197977
421 Ga0207689_10078810
422 Ga0207667_10084315
423 Ga0207668_10018294
424 Ga0207677_10060410
425 Ga0207703_10082798
426 Ga0207648_10003173
427 Ga0207648_10027319
428 Ga0207683_10001401
429 Ga0207683_10018280
430 Ga0207698_10020794
431 Ga0207698_10121623
432 Ga0209282_1016880
433 Ga0268266_10000861
434 Ga0268266_10006629
435 Ga0265318_10005322
436 Ga0307517_10117706
437 Ga0265338_10003550
438 Ga0265332_10010643
439 Ga0265320_10041447
440 Ga0265331_10025997
441 Ga0307513_10004297
442 Ga0265313_10001435
443 Ga0265313_10002502
444 Ga0265314_10027225
445 Ga0265314_10064385
446 Ga0265314_10066663
447 Ga0307413_10055122
448 Ga0307415_100012030
449 Ga0373942_0027727
450 Ga0316582_0082160
451 Ga0316584_0047314
452 Ga0436364_0704354
453 Ga0436364_1428481
454 Ga0436365_0740315
455 Ga0436365_0806562
456 Ga0436365_0837646
457 Ga0436365_1672037
458 Ga0436360_0117595
459 Ga0436360_0928848
460 Ga0436360_1230647
461 Ga0436361_0057351
462 Ga0436361_0484186
463 Ga0436363_0610096
464 Ga0436363_0926061
465 Ga0436362_0446129
466 Ga0436362_0591304
467 Ga0451837_1249947
468 Ga0439431_0025218
469 Ga0450920_000034
470 Ga0450922_001275
471 Ga0450902_000424
472 Ga0450905_000694
473 Ga0450907_000040
474 Ga0450910_000005
475 Ga0450908_000239
476 Ga0450901_000200
477 Ga0466966_0019885
478 Ga0466959_0012416
479 Ga0451576_0006175
480 Ga0451576_0041999
481 Ga0466967_0032106
482 Ga0495585_0002798
483 Ga0495607_0038718
484 Ga0495616_0005084
485 Ga0495631_0052288
486 Ga0495632_0000037
487 Ga0495632_0001008
488 Ga0495637_0000073
489 Ga0495637_0002529
490 Ga0495643_0015805
491 Ga0495644_0026537
492 Ga0495654_0001087
493 Ga0495609_0036297
494 Ga0495621_0006560
495 Ga0495622_0006917
496 Ga0495668_0062247
497 Ga0495611_0030473
498 Ga0495661_0003305
499 Ga0495661_0003813
500 Ga0495671_0000560
501 Ga0495671_0001098
502 Ga0495589_0012727
503 Ga0495636_0045897
504 Ga0495683_0000868
505 Ga0495683_0015053
506 Ga0495687_005857
507 Ga0495679_001016
508 Ga0495673_0000221
509 Ga0495602_0049013
510 Ga0496100_0031518
511 Ga0496102_0051492
512 Ga0496104_0002651
513 Ga0496104_0021917
514 Ga0496104_0105966
515 Ga0496105_0001775
516 Ga0496105_0066975
517 Ga0496108_0000585
518 Ga0496109_0000377
519 Ga0496110_0033348
520 Ga0496111_0121319
521 Ga0496112_0001873
522 Ga0496113_0000368
523 Ga0496115_0006076
524 Ga0496115_0013998
525 Ga0496116_0095885
526 Ga0496119_0003746
527 Ga0496119_0005252
528 Ga0496121_0109078
529 Ga0496122_0005183
530 Ga0496122_0008680
531 Ga0496123_0001148
532 Ga0496123_0007882
533 Ga0496125_0017665
534 Ga0496126_0057174
535 Ga0496126_0088113
536 Ga0495682_0000379
537 Ga0501033_0022576
538 Ga0501033_0024079
539 Ga0501033_0119917
540 Ga0501034_0000611
541 Ga0501034_0045543
542 Ga0501036_0172804
543 Ga0501038_0015711
544 Ga0501039_0007916
545 Ga0501040_0004867
546 Ga0501041_0009321
547 Ga0501041_0057252
548 Ga0501042_0012238
549 Ga0501042_0015640
550 Ga0501043_0008696
551 Ga0501043_0067691
552 Ga0501046_0006017
553 Ga0501046_0011248
554 Ga0501046_0142732
555 Ga0501047_0002896
556 Ga0501047_0048308
557 Ga0501047_0050354
558 Ga0501048_0008292
559 Ga0501067_0002820
560 Ga0501069_0002645
561 Ga0501071_0134560
562 Ga0501072_0019507
563 Ga0501073_0019988
564 Ga0501075_0069615
565 Ga0501075_0127425
566 Ga0501076_0006977
567 Ga0501076_0045555
568 Ga0501076_0240237
569 Ga0501077_0014158
570 Ga0501238_001264
571 Ga0501252_001136
572 Ga0501079_0004255
573 Ga0501079_0062279
574 Ga0501081_0000483
575 Ga0501081_0032295
576 Ga0501035_0005839
577 Ga0501035_0007180
578 Ga0501035_0023526
579 Ga0501035_0071388
580 Ga0501044_0020762
581 Ga0501044_0088518
582 Ga0501045_0005798
583 nmdc:mga00v17_4025_c2
584 nmdc:mga00v17_48540_c1
585 nmdc:mga0k408_2143_c1
586 nmdc:mga05p37_90226_c1
587 Ga0500643_000006
588 Ga0500556_0000022
589 Ga0500568_0034183
590 Ga0500573_0000009
591 Ga0501084_0002763
592 Ga0501084_0004951
593 Ga0501082_0001434
594 Ga0501082_0016975
595 Ga0530510_0005417
596 Ga0530510_0179222
597 2511254192
598 2511254201
599 2601611119
600 2601747892
601 2644412975
602 2738694015
603 2739306941
604 2739327400
605 2739607179
606 2760304912
607 2760621255
608 2765465850
609 2770196429
610 2776269434
611 2776282364
612 2809026052
613 2835188841
614 2839986533
615 2839993496
616 2840766506
617 2842875088
618 2894653538
619 2904579857
620 2909044079
621 2919068074
622 2919120473
623 2928522633
624 2933598204
625 2954013986
626 3002141848
627 8045867993
628 8054563920
629 8054564385
630 8054930392
631 8056140000
632 8056579842

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04295

GD_AH_second

D-galactarate dehydratase/Altronate hydrolase, second domain

160

303

0.98

PF20629

GD_AH_C

D-galactarate/Altronate dehydratase, C-terminal

312

554

0.98

PF08666

SAF

SAF domain

63

130

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3k3s-assembly3.cif.gz_C crystal structure of altronate hydrolase (fragment 1-84) from shigella flexneri. 0.9321 3 81
6u7l-assembly2.cif.gz_C 2.75 angstrom crystal structure of galactarate dehydratase from escherichia coli. 0.901 1 499
6u7l-assembly2.cif.gz_D 2.75 angstrom crystal structure of galactarate dehydratase from escherichia coli. 0.9007 1 499
6u7l-assembly2.cif.gz_D 2.75 angstrom crystal structure of galactarate dehydratase from escherichia coli. 0.8988 1 499
6u7l-assembly2.cif.gz_C 2.75 angstrom crystal structure of galactarate dehydratase from escherichia coli. 0.8954 1 499
ID Description Score Start End Superfamily
3k3sD01 Mainly Beta;Roll;Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4; 0.927 4 81 2.30.130.110
af_P39829_14_92_2.30.130.110 Mainly Beta;Roll;Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4; 0.9093 4 78 2.30.130.110
3k3sD01 Mainly Beta;Roll;Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4; 0.8626 4 81 2.30.130.110
af_P39829_14_92_2.30.130.110 Mainly Beta;Roll;Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4; 0.8554 4 78 2.30.130.110
af_Q55D12_405_491_3.40.50.800 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain 0.8051 120 143 3.40.50.800
ID Description Score Start End GO Terms
AF-A0A848TP75-F1-model_v4 UxaA family hydrolase 0.9925 1 76 GO:0016787
GO:0016829
GO:0019698
AF-K5CYI7-F1-model_v4 deleted 0.9911 101 492
AF-A0A7L5XUM2-F1-model_v4 UxaA family hydrolase 0.9903 5 499 GO:0016787
GO:0016829
GO:0019698
AF-A0A4Q3IVG0-F1-model_v4 deleted 0.9896 214 499
AF-A0A4Q3IM07-F1-model_v4 Altronate dehydratase 0.9894 178 499 GO:0016829
GO:0019698

Map