F403457

General Info

Members Datasets Scaffolds Average Seq Length
315 228 246 356

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8056579771|8056584339
Length 406
Sequence PSDPARRSSGSTPTPAERAQELHPSRRRTRADVRRWRRLLADERAEAAVYRDLAGRRAGEEREILLALARAEKRHESHWLDLLGPDVGAPVRGDLRTRALGFLARRFGGVFVLALAQRAEARSSYAHDADATVTMAADEQIHEEVVRALATRGRNRLSGTFRAAVFGANDGLVSNLALVLGIGASGVATSTVLLSGLAGLLAGALSMGAGEFVSVRSQRELLEASSPSPAAGAALPHLDVDANELALVYRARGMTIEDATAHADAVLARLAVTPTEQQGPLLRVHGASAAERPADGTDSADDADDLDGADDLETHGTAWGAAVSSFCFFASGAVVPVLPYLFGLEGLAAVVVATALVGLALLVTGAVVGLLSGTSPLTRALRQIAIGLGAAGVTYVLGLVFGATVG

Samples

Sample ID Description Type Environment
1 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
2 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
3 2643221546 Microbacterium sp. Root53 Isolate Unclassified
4 2643221549 Agromyces sp. Root1464 Isolate Unclassified
5 2643221572 Leifsonia sp. Root60 Isolate Unclassified
6 2643221616 Leifsonia sp. Root227 Isolate Unclassified
7 2643221619 Agromyces sp. Root81 Isolate Unclassified
8 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
9 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
10 2643221649 Leifsonia sp. Root4 Isolate Unclassified
11 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
12 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
13 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
14 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
15 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
16 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
17 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
18 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
19 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
20 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
21 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
22 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
23 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
24 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
25 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
26 2773857759 Microbacterium sp. 1294 Isolate Unclassified
27 2808606372 Agromyces sp. 23-23 Isolate Unclassified
28 2808606394 Promicromonospora sp. C35 Isolate Unclassified
29 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
30 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
31 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
32 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
33 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
34 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
35 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
36 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
37 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
38 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
39 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
40 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
41 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
42 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
43 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
44 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
45 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
46 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
47 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
48 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
49 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
50 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
51 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
52 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
53 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
54 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
55 2928153084 Leifsonia sp. 563 Isolate Unclassified
56 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
57 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
58 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
59 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
60 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
61 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
62 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
63 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
64 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
65 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
66 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
67 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
68 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
69 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
70 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
71 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
72 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
73 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
74 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
75 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
76 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
77 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
78 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
79 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
80 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
81 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
82 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
83 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
84 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
85 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
86 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
87 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
88 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
89 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
90 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
91 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
92 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
93 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
94 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
95 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
96 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
97 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
98 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
99 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
100 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
101 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
102 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
103 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
104 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
105 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
106 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
107 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
108 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
109 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
111 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
113 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
114 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
115 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
149 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
150 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
151 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
152 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
153 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
154 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
155 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
156 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
157 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
158 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
159 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
160 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
161 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
162 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
163 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
164 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
165 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
166 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
167 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
168 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
169 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
170 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
171 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
172 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
173 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
174 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
175 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
176 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
177 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
178 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
179 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
180 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
181 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
182 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
183 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
184 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
185 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
186 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
187 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
188 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
189 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
190 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
191 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
192 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
193 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
194 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
195 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
196 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
197 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
198 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
199 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
200 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
201 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
202 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
203 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
204 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
205 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
206 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
207 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
208 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
209 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
210 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
211 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
212 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
213 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
214 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
215 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
216 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
217 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
218 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
219 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
220 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
221 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
222 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
223 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
224 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
225 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
226 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
227 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
228 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.46
Metatranscriptomes 0.63
Isolates 21.9

Biome Distribution

Category Percentage (%)
Aerial Root 0.32
Bulb 0
Endosphere 6.98
Nodule 0
Rhizoplane 4.76
Rhizosphere 63.81
Stem 0
Stem Tuber 0
Unclassified 24.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10008931 3300002067 Bacteria 3232
2 JGI25152J39213_1000441 3300002773 Bacteria 24773
3 rootH1_10004811 3300003323 Bacteria 3430
4 Ga0006562J51391_1203191 3300003578 Bacteria 4960
5 Ga0006562J51391_1203192 3300003578 Bacteria 4820
6 Ga0055527_1000001 3300003760 Bacteria 850044
7 Ga0055529_1000065 3300003763 Bacteria 173112
8 Ga0070658_10000242 3300005327 Bacteria 48504
9 Ga0070683_100273939 3300005329 Bacteria 1605
10 Ga0070683_100295082 3300005329 Bacteria 1542
11 Ga0068869_100128566 3300005334 Bacteria 1945
12 Ga0070682_100012116 3300005337 Bacteria 4935
13 Ga0070682_100105793 3300005337 Bacteria 1866
14 Ga0068868_100120561 3300005338 Bacteria 2139
15 Ga0068868_100302572 3300005338 Bacteria 1358
16 Ga0070660_100030361 3300005339 Bacteria 4055
17 Ga0070689_100061561 3300005340 Bacteria 2919
18 Ga0070668_100075850 3300005347 Bacteria 2625
19 Ga0070675_100316295 3300005354 Bacteria 1378
20 Ga0070659_100083492 3300005366 Bacteria 2553
21 Ga0070659_100094446 3300005366 Bacteria 2401
22 Ga0070710_10005170 3300005437 Bacteria 6180
23 Ga0070678_100179557 3300005456 Bacteria 1731
24 Ga0070679_100196243 3300005530 Bacteria 1986
25 Ga0070684_100057012 3300005535 Bacteria 3410
26 Ga0070684_100234819 3300005535 Bacteria 1675
27 Ga0068854_100208090 3300005578 Bacteria 1542
28 Ga0070702_100167674 3300005615 Bacteria 1425
29 Ga0068852_100056623 3300005616 Bacteria 3389
30 Ga0068864_100168797 3300005618 Bacteria 1994
31 Ga0068864_100210416 3300005618 Bacteria 1790
32 Ga0068862_100106787 3300005844 Bacteria 2455
33 Ga0081538_10000584 3300005981 Bacteria 40455
34 Ga0105244_10018969 3300009036 Bacteria 3850
35 Ga0111539_10102611 3300009094 Bacteria 3357
36 Ga0105245_10085238 3300009098 Bacteria 2896
37 Ga0105247_10162227 3300009101 Bacteria 1481
38 Ga0105248_10201996 3300009177 Bacteria 2239
39 Ga0105238_10253288 3300009551 Bacteria 1739
40 Ga0105239_10102811 3300010375 Bacteria 3162
41 Ga0105246_10002744 3300011119 Bacteria 10653
42 Ga0157371_10006791 3300013102 Bacteria 9355
43 Ga0157370_10009385 3300013104 Bacteria 10463
44 Ga0157369_10000618 3300013105 Bacteria 46223
45 Ga0157369_10001794 3300013105 Bacteria 25978
46 Ga0157369_10041070 3300013105 Bacteria 5050
47 Ga0157369_10091169 3300013105 Bacteria 3254
48 Ga0157369_10228013 3300013105 Bacteria 1948
49 Ga0157378_10313889 3300013297 Bacteria 1521
50 Ga0157372_10089597 3300013307 Bacteria 3495
51 Ga0157372_10621335 3300013307 Bacteria 1259
52 Ga0163163_10055352 3300014325 Bacteria 3921
53 Ga0163163_10210588 3300014325 Bacteria 1993
54 Ga0163163_10335920 3300014325 Bacteria 1566
55 Ga0157377_10106816 3300014745 Bacteria 1677
56 Ga0163161_10056996 3300017792 Bacteria 2839
57 Ga0209672_100006 3300025228 Bacteria 1004497
58 Ga0207425_1010601 3300025245 Bacteria 2236
59 Ga0209148_1000015 3300025254 Bacteria 850103
60 Ga0209129_1000238 3300025258 Bacteria 59892
61 Ga0209455_1000013 3300025272 Bacteria 850103
62 Ga0209025_1000458 3300025294 Bacteria 79809
63 Ga0207692_10032516 3300025898 Bacteria 2508
64 Ga0207642_10045975 3300025899 Bacteria 1941
65 Ga0207680_10048060 3300025903 Bacteria 2532
66 Ga0207647_10028569 3300025904 Bacteria 3620
67 Ga0207647_10178698 3300025904 Bacteria 1233
68 Ga0207645_10009731 3300025907 Bacteria 6638
69 Ga0207643_10045641 3300025908 Bacteria 2475
70 Ga0207705_10000001 3300025909 Bacteria 2061880
71 Ga0207671_10143370 3300025914 Bacteria 1842
72 Ga0207662_10004325 3300025918 Bacteria 7462
73 Ga0207657_10018321 3300025919 Bacteria 6689
74 Ga0207657_10035531 3300025919 Bacteria 4467
75 Ga0207650_10134120 3300025925 Bacteria 1940
76 Ga0207687_10091295 3300025927 Bacteria 2221
77 Ga0207687_10121832 3300025927 Bacteria 1952
78 Ga0207664_10195644 3300025929 Bacteria 1743
79 Ga0207690_10061940 3300025932 Bacteria 2545
80 Ga0207706_10053708 3300025933 Bacteria 3556
81 Ga0207686_10038621 3300025934 Bacteria 2890
82 Ga0207709_10016939 3300025935 Bacteria 4061
83 Ga0207704_10134704 3300025938 Bacteria 1717
84 Ga0207691_10077650 3300025940 Bacteria 2991
85 Ga0207711_10058162 3300025941 Bacteria 3326
86 Ga0207689_10015564 3300025942 Bacteria 6442
87 Ga0207689_10196230 3300025942 Bacteria 1666
88 Ga0207679_10044892 3300025945 Bacteria 3192
89 Ga0207668_10096722 3300025972 Bacteria 2183
90 Ga0207668_10238668 3300025972 Bacteria 1469
91 Ga0207677_10097725 3300026023 Bacteria 2152
92 Ga0207703_10446940 3300026035 Bacteria 1207
93 Ga0207678_10066429 3300026067 Bacteria 3097
94 Ga0207678_10081323 3300026067 Bacteria 2773
95 Ga0207648_10049809 3300026089 Bacteria 3664
96 Ga0207676_10289858 3300026095 Bacteria 1490
97 Ga0207676_10330448 3300026095 Bacteria 1403
98 Ga0207674_10078431 3300026116 Bacteria 3308
99 Ga0207675_100054732 3300026118 Bacteria 3722
100 Ga0207675_100066517 3300026118 Bacteria 3369
101 Ga0207683_10113146 3300026121 Bacteria 2431
102 Ga0268265_10079758 3300028380 Bacteria 2579
103 Ga0268264_10153086 3300028381 Bacteria 2070
104 Ga0307513_10130317 3300031456 Bacteria 2461
105 Ga0307408_100003201 3300031548 Bacteria 11276
106 Ga0307514_10002811 3300031649 Bacteria 17468
107 Ga0307410_10000531 3300031852 Bacteria 15580
108 Ga0307406_10000557 3300031901 Bacteria 21436
109 Ga0307407_10001765 3300031903 Bacteria 8072
110 Ga0307412_10011135 3300031911 Bacteria 5202
111 Ga0307409_100000108 3300031995 Bacteria 30166
112 Ga0307409_100234486 3300031995 Bacteria 1666
113 Ga0307416_100000145 3300032002 Bacteria 41613
114 Ga0307414_10012010 3300032004 Bacteria 5106
115 Ga0307415_100001103 3300032126 Bacteria 12585
116 Ga0395899_0007719 3300037312 Bacteria 8294
117 Ga0395899_0008090 3300037312 Bacteria 8098
118 Ga0395900_0185738 3300037418 Bacteria 2110
119 Ga0395900_0366661 3300037418 Bacteria 1411
120 Ga0395898_0000677 3300037466 Bacteria 61608
121 Ga0395898_0028737 3300037466 Bacteria 5572
122 Ga0395898_0077124 3300037466 Bacteria 3217
123 Ga0395898_0093242 3300037466 Bacteria 2895
124 Ga0395905_0013363 3300037471 Bacteria 7867
125 Ga0395901_0006238 3300038443 Bacteria 12086
126 Ga0395901_0026013 3300038443 Bacteria 6009
127 Ga0395901_0387925 3300038443 Bacteria 1436
128 Ga0451793_0526721 3300041452 Bacteria 13250
129 Ga0451797_0920806 3300041453 Bacteria 4311
130 Ga0451802_0467834 3300041460 Bacteria 1199
131 Ga0451843_0026544 3300041509 Bacteria 4050
132 Ga0450920_001214 3300042122 Bacteria 4228
133 Ga0466972_0108131 3300044658 Bacteria 1314
134 Ga0466965_0093786 3300044683 Bacteria 1529
135 Ga0466966_0028511 3300044684 Bacteria 3636
136 Ga0466970_0060459 3300044765 Bacteria 2029
137 Ga0466970_0118585 3300044765 Bacteria 1448
138 Ga0466960_0009651 3300044901 Bacteria 3986
139 Ga0466960_0042362 3300044901 Bacteria 2161
140 Ga0466959_0039021 3300045049 Bacteria 3509
141 Ga0466959_0098421 3300045049 Bacteria 2096
142 Ga0466967_0000412 3300045976 Bacteria 20240
143 Ga0466967_0282907 3300045976 Bacteria 1592
144 Ga0495627_014104 3300046453 Bacteria 2798
145 Ga0495665_0018701 3300046531 Bacteria 3722
146 Ga0495581_0028326 3300047315 Bacteria 3247
147 Ga0495672_0014953 3300047320 Bacteria 5289
148 Ga0496102_0038240 3300048905 Bacteria 4330
149 Ga0496102_0149670 3300048905 Bacteria 2193
150 Ga0496105_0004552 3300048908 Bacteria 10440
151 Ga0496105_0140219 3300048908 Bacteria 1990
152 Ga0496107_0020080 3300048910 Bacteria 4718
153 Ga0496108_0077057 3300048911 Bacteria 2819
154 Ga0496111_0123851 3300048914 Bacteria 1910
155 Ga0496112_0042000 3300048915 Bacteria 4474
156 Ga0496113_0060117 3300048916 Bacteria 2864
157 Ga0496114_0012501 3300048917 Bacteria 6798
158 Ga0496114_0028174 3300048917 Bacteria 4607
159 Ga0496115_0046631 3300048918 Bacteria 3465
160 Ga0496117_0000276 3300048920 Bacteria 95844
161 Ga0496117_0001654 3300048920 Bacteria 31298
162 Ga0496117_0002076 3300048920 Bacteria 26452
163 Ga0496117_0021565 3300048920 Bacteria 5204
164 Ga0496118_0000089 3300048921 Bacteria 175942
165 Ga0496119_0020787 3300048922 Bacteria 4769
166 Ga0496119_0022538 3300048922 Bacteria 4503
167 Ga0496119_0040922 3300048922 Bacteria 2957
168 Ga0496119_0043086 3300048922 Bacteria 2856
169 Ga0496119_0058488 3300048922 Bacteria 2323
170 Ga0496120_0000554 3300048923 Bacteria 56930
171 Ga0496120_0002092 3300048923 Bacteria 21395
172 Ga0496120_0128744 3300048923 Bacteria 1299
173 Ga0496122_0000427 3300048925 Bacteria 88913
174 Ga0496122_0001200 3300048925 Bacteria 44223
175 Ga0496122_0003627 3300048925 Bacteria 20077
176 Ga0496122_0006977 3300048925 Bacteria 12715
177 Ga0496122_0009053 3300048925 Bacteria 10566
178 Ga0496123_0000074 3300048926 Bacteria 196689
179 Ga0496123_0001124 3300048926 Bacteria 39914
180 Ga0496123_0013589 3300048926 Bacteria 6816
181 Ga0496123_0014408 3300048926 Bacteria 6556
182 Ga0496123_0042190 3300048926 Bacteria 3153
183 Ga0496124_0000037 3300048927 Bacteria 317430
184 Ga0496124_0000400 3300048927 Bacteria 79176
185 Ga0496124_0005408 3300048927 Bacteria 14402
186 Ga0496124_0012419 3300048927 Bacteria 8410
187 Ga0496124_0198726 3300048927 Bacteria 1527
188 Ga0496125_0000074 3300048928 Bacteria 235549
189 Ga0496125_0002111 3300048928 Bacteria 26704
190 Ga0496125_0007968 3300048928 Bacteria 11189
191 Ga0496125_0068992 3300048928 Bacteria 2777
192 Ga0496126_0001052 3300048929 Bacteria 46677
193 Ga0496126_0005489 3300048929 Bacteria 14449
194 Ga0496126_0023025 3300048929 Bacteria 6042
195 Ga0501031_0002521 3300049568 Bacteria 11664
196 Ga0501031_0090041 3300049568 Bacteria 2001
197 Ga0501032_0001299 3300049569 Bacteria 20030
198 Ga0501033_0025648 3300049570 Bacteria 4441
199 Ga0501033_0053423 3300049570 Bacteria 2992
200 Ga0501033_0105567 3300049570 Bacteria 2053
201 Ga0501034_0021755 3300049571 Bacteria 6534
202 Ga0501034_0063846 3300049571 Bacteria 3696
203 Ga0501036_0013110 3300049572 Bacteria 6885
204 Ga0501036_0053200 3300049572 Bacteria 3429
205 Ga0501037_0000659 3300049573 Bacteria 26506
206 Ga0501038_0003071 3300049574 Bacteria 15558
207 Ga0501038_0030066 3300049574 Bacteria 4809
208 Ga0501038_0089988 3300049574 Bacteria 2573
209 Ga0501039_0000181 3300049575 Bacteria 44892
210 Ga0501042_0102184 3300049578 Bacteria 2062
211 Ga0501043_0018390 3300049579 Bacteria 5480
212 Ga0501043_0024903 3300049579 Bacteria 4695
213 Ga0501046_0000286 3300049580 Bacteria 51204
214 Ga0501046_0004836 3300049580 Bacteria 12136
215 Ga0501047_0012391 3300049581 Bacteria 8070
216 Ga0501047_0051665 3300049581 Bacteria 3972
217 Ga0501047_0218900 3300049581 Bacteria 1760
218 Ga0501048_0024144 3300049582 Bacteria 4438
219 Ga0501067_0011794 3300049583 Bacteria 4842
220 Ga0501068_0013090 3300049584 Bacteria 4715
221 Ga0501070_0000191 3300049586 Bacteria 57453
222 Ga0501070_0012293 3300049586 Bacteria 7224
223 Ga0501070_0119723 3300049586 Bacteria 2176
224 Ga0501071_0000023 3300049587 Bacteria 51151
225 Ga0501083_0000011 3300049744 Bacteria 181041
226 Ga0501035_0001199 3300049822 Bacteria 27008
227 Ga0501035_0048166 3300049822 Bacteria 3822
228 Ga0501035_0061271 3300049822 Bacteria 3349
229 Ga0501044_0000954 3300049823 Bacteria 34722
230 Ga0501044_0006142 3300049823 Bacteria 13264
231 Ga0501044_0028452 3300049823 Bacteria 5899
232 Ga0501045_0002650 3300049824 Bacteria 12197
233 nmdc:mga03n38_12288_c1 3300050490 Bacteria 3216
234 nmdc:mga07m45_21787_c1 3300050496 Bacteria 3493
235 nmdc:mga07m45_40783_c1 3300050496 Bacteria 2598
236 nmdc:mga08y16_58842_c1 3300050511 Bacteria 4015
237 Ga0500635_0000044 3300053080 Bacteria 87331
238 Ga0500559_0000168 3300053136 Bacteria 51816
239 Ga0500559_0001836 3300053136 Bacteria 11581
240 Ga0500568_0000337 3300053139 Bacteria 36917
241 Ga0500573_0000014 3300053140 Bacteria 193353
242 Ga0500573_0000936 3300053140 Bacteria 13325
243 Ga0500573_0004386 3300053140 Bacteria 7423
244 Ga0500573_0005942 3300053140 Bacteria 6569
245 Ga0500573_0027885 3300053140 Bacteria 3249
246 Ga0500573_0076394 3300053140 Bacteria 1906

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037466 Ga0395898_0077124 Ga0395898_0077124_1965_3071 288
2 3300037471 Ga0395905_0013363 Ga0395905_0013363_3588_4694 288
3 3300038443 Ga0395901_0026013 Ga0395901_0026013_2947_4053 288
4 3300013105 Ga0157369_10001794 Ga0157369_1000179419 295
5 3300037312 Ga0395899_0008090 Ga0395899_0008090_973_2079 298
6 3300037466 Ga0395898_0028737 Ga0395898_0028737_1031_2137 298
7 3300037466 Ga0395898_0093242 Ga0395898_0093242_1381_2487 298
8 3300038443 Ga0395901_0006238 Ga0395901_0006238_3661_4767 298
9 3300044684 Ga0466966_0028511 Ga0466966_0028511_2069_3175 298
10 3300048920 Ga0496117_0002076 Ga0496117_0002076_13167_14321 298
11 3300048922 Ga0496119_0022538 Ga0496119_0022538_2254_3333 298
12 3300048922 Ga0496119_0040922 Ga0496119_0040922_559_1713 298
13 3300048923 Ga0496120_0000554 Ga0496120_0000554_40559_41638 298
14 3300048923 Ga0496120_0002092 Ga0496120_0002092_4770_5924 298
15 3300048925 Ga0496122_0009053 Ga0496122_0009053_9095_10249 298
16 3300048926 Ga0496123_0013589 Ga0496123_0013589_398_1552 298
17 3300048927 Ga0496124_0005408 Ga0496124_0005408_3541_4695 298
18 3300048928 Ga0496125_0007968 Ga0496125_0007968_385_1464 298
19 3300048929 Ga0496126_0005489 Ga0496126_0005489_1280_2434 298
20 3300005337 Ga0070682_100105793 Ga0070682_1001057932 300
21 3300005338 Ga0068868_100120561 Ga0068868_1001205612 300
22 3300005535 Ga0070684_100234819 Ga0070684_1002348192 300
23 3300009551 Ga0105238_10253288 Ga0105238_102532882 300
24 3300010375 Ga0105239_10102811 Ga0105239_101028112 300
25 3300026023 Ga0207677_10097725 Ga0207677_100977252 300
26 3300048911 Ga0496108_0077057 Ga0496108_0077057_876_1976 300
27 3300048915 Ga0496112_0042000 Ga0496112_0042000_858_1958 300
28 3300050490 nmdc:mga03n38_12288_c1 nmdc:mga03n38_12288_c1_459_1559 300
29 3300013102 Ga0157371_10006791 Ga0157371_100067914 303
30 3300003323 rootH1_10004811 rootH1_100048114 304
31 3300031548 Ga0307408_100003201 Ga0307408_1000032013 305
32 3300031852 Ga0307410_10000531 Ga0307410_1000053116 305
33 3300031901 Ga0307406_10000557 Ga0307406_100005579 305
34 3300031903 Ga0307407_10001765 Ga0307407_100017655 305
35 3300031995 Ga0307409_100000108 Ga0307409_10000010824 305
36 3300032002 Ga0307416_100000145 Ga0307416_10000014524 305
37 3300032004 Ga0307414_10012010 Ga0307414_100120102 305
38 3300032126 Ga0307415_100001103 Ga0307415_10000110310 305
39 3300053136 Ga0500559_0001836 Ga0500559_0001836_2185_3261 306
40 3300026035 Ga0207703_10446940 Ga0207703_104469401 307
41 3300048920 Ga0496117_0000276 Ga0496117_0000276_42044_43207 307
42 3300053139 Ga0500568_0000337 Ga0500568_0000337_13757_14830 307
43 3300005337 Ga0070682_100012116 Ga0070682_1000121163 309
44 3300041452 Ga0451793_0526721 Ga0451793_0526721_2121_3209 309
45 3300041453 Ga0451797_0920806 Ga0451797_0920806_102_1190 309
46 3300041460 Ga0451802_0467834 Ga0451802_0467834_49_1137 309
47 3300041509 Ga0451843_0026544 Ga0451843_0026544_1255_2343 309
48 3300044901 Ga0466960_0009651 Ga0466960_0009651_2073_3146 309
49 3300045976 Ga0466967_0282907 Ga0466967_0282907_203_1276 309
50 3300005340 Ga0070689_100061561 Ga0070689_1000615613 310
51 3300005354 Ga0070675_100316295 Ga0070675_1003162951 310
52 3300005456 Ga0070678_100179557 Ga0070678_1001795571 310
53 3300013105 Ga0157369_10228013 Ga0157369_102280133 310
54 3300013307 Ga0157372_10089597 Ga0157372_100895972 310
55 3300014325 Ga0163163_10210588 Ga0163163_102105882 310
56 3300005535 Ga0070684_100057012 Ga0070684_1000570123 311
57 3300005615 Ga0070702_100167674 Ga0070702_1001676742 311
58 3300005618 Ga0068864_100210416 Ga0068864_1002104162 311
59 3300009094 Ga0111539_10102611 Ga0111539_101026112 311
60 3300009101 Ga0105247_10162227 Ga0105247_101622272 311
61 3300014325 Ga0163163_10335920 Ga0163163_103359202 311
62 3300017792 Ga0163161_10056996 Ga0163161_100569963 311
63 3300025899 Ga0207642_10045975 Ga0207642_100459751 311
64 3300025903 Ga0207680_10048060 Ga0207680_100480603 311
65 3300025907 Ga0207645_10009731 Ga0207645_100097312 311
66 3300025914 Ga0207671_10143370 Ga0207671_101433702 311
67 3300025919 Ga0207657_10035531 Ga0207657_100355312 311
68 3300025925 Ga0207650_10134120 Ga0207650_101341201 311
69 3300025933 Ga0207706_10053708 Ga0207706_100537083 311
70 3300025934 Ga0207686_10038621 Ga0207686_100386213 311
71 3300025940 Ga0207691_10077650 Ga0207691_100776502 311
72 3300025942 Ga0207689_10015564 Ga0207689_100155642 311
73 3300026067 Ga0207678_10081323 Ga0207678_100813232 311
74 3300048916 Ga0496113_0060117 Ga0496113_0060117_962_2041 311
75 3300050511 nmdc:mga08y16_58842_c1 nmdc:mga08y16_58842_c1_237_1316 311
76 3300005329 Ga0070683_100273939 Ga0070683_1002739392 312
77 3300005338 Ga0068868_100302572 Ga0068868_1003025721 312
78 3300005347 Ga0070668_100075850 Ga0070668_1000758501 312
79 3300005366 Ga0070659_100083492 Ga0070659_1000834922 312
80 3300005578 Ga0068854_100208090 Ga0068854_1002080902 312
81 3300005616 Ga0068852_100056623 Ga0068852_1000566233 312
82 3300005844 Ga0068862_100106787 Ga0068862_1001067872 312
83 3300009098 Ga0105245_10085238 Ga0105245_100852383 312
84 3300014745 Ga0157377_10106816 Ga0157377_101068162 312
85 3300025918 Ga0207662_10004325 Ga0207662_100043253 312
86 3300025938 Ga0207704_10134704 Ga0207704_101347042 312
87 3300025972 Ga0207668_10096722 Ga0207668_100967221 312
88 3300026089 Ga0207648_10049809 Ga0207648_100498092 312
89 3300026118 Ga0207675_100054732 Ga0207675_1000547322 312
90 3300028380 Ga0268265_10079758 Ga0268265_100797583 312
91 3300028381 Ga0268264_10153086 Ga0268264_101530862 312
92 3300049571 Ga0501034_0021755 Ga0501034_0021755_2053_3126 312
93 3300049587 Ga0501071_0000023 Ga0501071_0000023_19238_20311 312
94 3300013105 Ga0157369_10000618 Ga0157369_1000061849 313
95 3300042122 Ga0450920_001214 Ga0450920_001214_836_1963 314
96 3300045976 Ga0466967_0000412 Ga0466967_0000412_9008_10042 314
97 3300046531 Ga0495665_0018701 Ga0495665_0018701_1510_2601 315
98 3300047315 Ga0495581_0028326 Ga0495581_0028326_1073_2164 315
99 3300048923 Ga0496120_0128744 Ga0496120_0128744_126_1187 315
100 3300050496 nmdc:mga07m45_40783_c1 nmdc:mga07m45_40783_c1_382_1473 315
101 3300047320 Ga0495672_0014953 Ga0495672_0014953_2466_3536 316
102 3300049568 Ga0501031_0002521 Ga0501031_0002521_1621_2802 316
103 3300049569 Ga0501032_0001299 Ga0501032_0001299_17548_18729 316
104 3300049571 Ga0501034_0063846 Ga0501034_0063846_2505_3686 316
105 3300049572 Ga0501036_0013110 Ga0501036_0013110_4046_5227 316
106 3300049573 Ga0501037_0000659 Ga0501037_0000659_2033_3214 316
107 3300049574 Ga0501038_0030066 Ga0501038_0030066_2455_3636 316
108 3300049575 Ga0501039_0000181 Ga0501039_0000181_40393_41574 316
109 3300049578 Ga0501042_0102184 Ga0501042_0102184_633_1814 316
110 3300049579 Ga0501043_0024903 Ga0501043_0024903_840_2021 316
111 3300049580 Ga0501046_0000286 Ga0501046_0000286_24744_25925 316
112 3300049581 Ga0501047_0218900 Ga0501047_0218900_456_1637 316
113 3300049582 Ga0501048_0024144 Ga0501048_0024144_455_1606 316
114 3300049584 Ga0501068_0013090 Ga0501068_0013090_682_1863 316
115 3300049586 Ga0501070_0012293 Ga0501070_0012293_1970_3151 316
116 3300049822 Ga0501035_0048166 Ga0501035_0048166_59_1240 316
117 3300049823 Ga0501044_0006142 Ga0501044_0006142_11_1192 316
118 3300049824 Ga0501045_0002650 Ga0501045_0002650_1066_2247 316
119 3300037312 Ga0395899_0007719 Ga0395899_0007719_374_1492 317
120 3300038443 Ga0395901_0387925 Ga0395901_0387925_78_1196 317
121 3300048928 Ga0496125_0068992 Ga0496125_0068992_1590_2684 317
122 3300013105 Ga0157369_10091169 Ga0157369_100911693 318
123 3300025927 Ga0207687_10121832 Ga0207687_101218322 318
124 3300053140 Ga0500573_0000014 Ga0500573_0000014_110022_111077 318
125 3300053140 Ga0500573_0076394 Ga0500573_0076394_459_1511 318
126 3300005366 Ga0070659_100094446 Ga0070659_1000944462 320
127 3300005530 Ga0070679_100196243 Ga0070679_1001962432 320
128 3300025904 Ga0207647_10028569 Ga0207647_100285693 320
129 3300025932 Ga0207690_10061940 Ga0207690_100619402 320
130 3300049570 Ga0501033_0053423 Ga0501033_0053423_1527_2657 320
131 3300049744 Ga0501083_0000011 Ga0501083_0000011_139135_140229 320
132 3300037418 Ga0395900_0366661 Ga0395900_0366661_21_1052 321
133 3300003760 Ga0055527_1000001 Ga0055527_100000187 322
134 3300003763 Ga0055529_1000065 Ga0055529_100006587 322
135 3300013297 Ga0157378_10313889 Ga0157378_103138892 322
136 3300013307 Ga0157372_10621335 Ga0157372_106213352 322
137 3300025228 Ga0209672_100006 Ga0209672_100006889 322
138 3300025254 Ga0209148_1000015 Ga0209148_1000015733 322
139 3300025272 Ga0209455_1000013 Ga0209455_1000013733 322
140 3300025929 Ga0207664_10195644 Ga0207664_101956442 322
141 3300026121 Ga0207683_10113146 Ga0207683_101131462 322
142 3300048910 Ga0496107_0020080 Ga0496107_0020080_2051_3157 322
143 iso_pu_bacteria 2738543034 2739364793 322
144 3300026067 Ga0207678_10066429 Ga0207678_100664293 323
145 3300049570 Ga0501033_0105567 Ga0501033_0105567_775_1890 323
146 3300049581 Ga0501047_0051665 Ga0501047_0051665_1651_2766 323
147 3300049823 Ga0501044_0028452 Ga0501044_0028452_3591_4706 323
148 iso_pu_bacteria 2643221690 2644504540 323
149 iso_pu_bacteria 2643221694 2644523976 323
150 iso_pu_bacteria 2643221722 2644668073 323
151 3300048929 Ga0496126_0023025 Ga0496126_0023025_3130_4227 324
152 3300044658 Ga0466972_0108131 Ga0466972_0108131_102_1190 326
153 3300045049 Ga0466959_0039021 Ga0466959_0039021_2200_3288 326
154 3300045049 Ga0466959_0098421 Ga0466959_0098421_536_1603 326
155 3300048917 Ga0496114_0028174 Ga0496114_0028174_2335_3423 326
156 iso_pu_bacteria 2585428094 2587862745 326
157 iso_pu_bacteria 2643221649 2644279629 326
158 iso_pu_bacteria 2904497146 2904501572 326
159 iso_pu_bacteria 2919034639 2919035607 326
160 iso_pu_bacteria 2919538618 2919539201 326
161 3300002773 JGI25152J39213_1000441 JGI25152J39213_10004417 327
162 3300005437 Ga0070710_10005170 Ga0070710_100051706 327
163 3300009036 Ga0105244_10018969 Ga0105244_100189694 327
164 3300011119 Ga0105246_10002744 Ga0105246_100027444 327
165 3300025245 Ga0207425_1010601 Ga0207425_10106012 327
166 3300025258 Ga0209129_1000238 Ga0209129_100023818 327
167 3300025294 Ga0209025_1000458 Ga0209025_100045824 327
168 3300025898 Ga0207692_10032516 Ga0207692_100325163 327
169 3300025935 Ga0207709_10016939 Ga0207709_100169393 327
170 3300031456 Ga0307513_10130317 Ga0307513_101303172 327
171 3300044765 Ga0466970_0060459 Ga0466970_0060459_147_1268 327
172 3300044765 Ga0466970_0118585 Ga0466970_0118585_155_1240 327
173 3300048905 Ga0496102_0149670 Ga0496102_0149670_1042_2121 327
174 3300048920 Ga0496117_0001654 Ga0496117_0001654_1331_2410 327
175 3300048921 Ga0496118_0000089 Ga0496118_0000089_138196_139275 327
176 3300048922 Ga0496119_0020787 Ga0496119_0020787_3668_4747 327
177 3300048925 Ga0496122_0001200 Ga0496122_0001200_24093_25148 327
178 3300048926 Ga0496123_0001124 Ga0496123_0001124_17406_18461 327
179 3300048926 Ga0496123_0042190 Ga0496123_0042190_1732_2811 327
180 3300048927 Ga0496124_0000037 Ga0496124_0000037_227725_228804 327
181 iso_pu_bacteria 2751185788 2753302191 327
182 iso_pu_bacteria 2758568621 2760625957 327
183 iso_pu_bacteria 2844849076 2844851798 327
184 iso_pu_bacteria 2904430863 2904432692 327
185 iso_pu_bacteria 2904501621 2904503137 327
186 iso_pu_bacteria 2908674828 2908675686 327
187 iso_pu_bacteria 2909074476 2909074735 327
188 iso_pu_bacteria 2919039151 2919040805 327
189 iso_pu_bacteria 2919042368 2919043875 327
190 iso_pu_bacteria 2919051321 2919054039 327
191 iso_pu_bacteria 2928104781 2928105145 327
192 iso_pu_bacteria 2928500415 2928500670 327
193 iso_pu_bacteria 2984551494 2984554330 327
194 3300005329 Ga0070683_100295082 Ga0070683_1002950821 328
195 3300009177 Ga0105248_10201996 Ga0105248_102019961 328
196 3300025927 Ga0207687_10091295 Ga0207687_100912951 328
197 3300025941 Ga0207711_10058162 Ga0207711_100581625 328
198 3300031911 Ga0307412_10011135 Ga0307412_100111353 328
199 3300046453 Ga0495627_014104 Ga0495627_014104_721_1950 328
200 3300053136 Ga0500559_0000168 Ga0500559_0000168_21375_22433 328
201 3300053140 Ga0500573_0000936 Ga0500573_0000936_6825_7883 328
202 3300053140 Ga0500573_0005942 Ga0500573_0005942_2378_3442 328
203 iso_pu_bacteria 2554235227 2555229504 328
204 iso_pu_bacteria 2643221635 2644198815 328
205 iso_pu_bacteria 2654587600 2655031525 328
206 iso_pu_bacteria 2808606372 2808902140 328
207 iso_pu_bacteria 2904765812 2904766560 328
208 iso_pu_bacteria 2904770941 2904772733 328
209 iso_pu_bacteria 2908811453 2908811518 328
210 iso_pu_bacteria 2919420072 2919421005 328
211 iso_pu_bacteria 2919432681 2919433237 328
212 3300005327 Ga0070658_10000242 Ga0070658_100002427 329
213 3300005334 Ga0068869_100128566 Ga0068869_1001285661 329
214 3300005339 Ga0070660_100030361 Ga0070660_1000303613 329
215 3300013104 Ga0157370_10009385 Ga0157370_100093851 329
216 3300025904 Ga0207647_10178698 Ga0207647_101786982 329
217 3300025908 Ga0207643_10045641 Ga0207643_100456413 329
218 3300025909 Ga0207705_10000001 Ga0207705_10000001516 329
219 3300025919 Ga0207657_10018321 Ga0207657_100183213 329
220 3300025942 Ga0207689_10196230 Ga0207689_101962302 329
221 3300025972 Ga0207668_10238668 Ga0207668_102386681 329
222 3300026095 Ga0207676_10330448 Ga0207676_103304481 329
223 3300026118 Ga0207675_100066517 Ga0207675_1000665172 329
224 3300031649 Ga0307514_10002811 Ga0307514_100028118 329
225 3300031995 Ga0307409_100234486 Ga0307409_1002344862 329
226 3300048905 Ga0496102_0038240 Ga0496102_0038240_2117_3211 329
227 3300048917 Ga0496114_0012501 Ga0496114_0012501_3413_4489 329
228 3300048918 Ga0496115_0046631 Ga0496115_0046631_1239_2315 329
229 3300048922 Ga0496119_0058488 Ga0496119_0058488_175_1269 329
230 3300048925 Ga0496122_0000427 Ga0496122_0000427_1247_2392 329
231 3300048926 Ga0496123_0000074 Ga0496123_0000074_31671_32816 329
232 3300048927 Ga0496124_0000400 Ga0496124_0000400_18803_19948 329
233 3300048927 Ga0496124_0012419 Ga0496124_0012419_6339_7433 329
234 3300048928 Ga0496125_0002111 Ga0496125_0002111_13705_14847 329
235 3300049568 Ga0501031_0090041 Ga0501031_0090041_476_1537 329
236 3300049579 Ga0501043_0018390 Ga0501043_0018390_1077_2138 329
237 3300049581 Ga0501047_0012391 Ga0501047_0012391_3452_4513 329
238 3300049586 Ga0501070_0119723 Ga0501070_0119723_560_1621 329
239 3300049822 Ga0501035_0001199 Ga0501035_0001199_23390_24451 329
240 3300049823 Ga0501044_0000954 Ga0501044_0000954_24077_25138 329
241 3300053140 Ga0500573_0027885 Ga0500573_0027885_1368_2423 329
242 iso_pu_bacteria 2643221549 2643767638 329
243 iso_pu_bacteria 2643221619 2644110995 329
244 iso_pu_bacteria 2811994880 2812362927 329
245 iso_pu_bacteria 2870622029 2870622305 329
246 iso_pu_bacteria 2919443155 2919446141 329
247 iso_pu_bacteria 2935409751 2935411450 329
248 iso_pu_bacteria 2939657138 2939659333 329
249 iso_pu_bacteria 8056037122 8056040079 329
250 3300053080 Ga0500635_0000044 Ga0500635_0000044_62245_63336 330
251 iso_pu_bacteria 2721755702 2723642099 330
252 iso_pu_bacteria 2757320536 2758226295 330
253 iso_pu_bacteria 2773857758 2774380663 330
254 iso_pu_bacteria 2956939328 2956939513 330
255 iso_pu_bacteria 3001119090 3001122298 330
256 iso_pu_bacteria 8056579771 8056584339 330
257 3300005981 Ga0081538_10000584 Ga0081538_1000058410 331
258 3300044683 Ga0466965_0093786 Ga0466965_0093786_161_1342 331
259 3300048922 Ga0496119_0043086 Ga0496119_0043086_1515_2666 331
260 3300048925 Ga0496122_0003627 Ga0496122_0003627_3530_4681 331
261 3300048925 Ga0496122_0006977 Ga0496122_0006977_5989_7176 331
262 3300048926 Ga0496123_0014408 Ga0496123_0014408_1507_2694 331
263 3300048928 Ga0496125_0000074 Ga0496125_0000074_56205_57356 331
264 3300048929 Ga0496126_0001052 Ga0496126_0001052_6406_7500 331
265 3300053140 Ga0500573_0004386 Ga0500573_0004386_291_1361 331
266 iso_pu_bacteria 2643221546 2643752675 331
267 iso_pu_bacteria 2643221632 2644181699 331
268 iso_pu_bacteria 2773857759 2774384637 331
269 iso_pu_bacteria 2835188231 2835190697 331
270 iso_pu_bacteria 2844852863 2844854100 331
271 iso_pu_bacteria 2906799679 2906800411 331
272 iso_pu_bacteria 2928121344 2928124936 331
273 iso_pu_bacteria 2977251589 2977253780 331
274 3300026095 Ga0207676_10289858 Ga0207676_102898582 332
275 3300049574 Ga0501038_0089988 Ga0501038_0089988_468_1556 332
276 3300013105 Ga0157369_10041070 Ga0157369_100410705 333
277 3300037418 Ga0395900_0185738 Ga0395900_0185738_1007_2092 333
278 3300037466 Ga0395898_0000677 Ga0395898_0000677_46428_47513 333
279 3300044901 Ga0466960_0042362 Ga0466960_0042362_780_1949 333
280 3300048908 Ga0496105_0004552 Ga0496105_0004552_2460_3563 333
281 3300048908 Ga0496105_0140219 Ga0496105_0140219_760_1875 333
282 3300048914 Ga0496111_0123851 Ga0496111_0123851_158_1210 333
283 3300048927 Ga0496124_0198726 Ga0496124_0198726_367_1485 333
284 3300049570 Ga0501033_0025648 Ga0501033_0025648_146_1240 333
285 3300049572 Ga0501036_0053200 Ga0501036_0053200_2190_3380 333
286 3300049574 Ga0501038_0003071 Ga0501038_0003071_11724_12914 333
287 3300049580 Ga0501046_0004836 Ga0501046_0004836_9296_10486 333
288 3300049583 Ga0501067_0011794 Ga0501067_0011794_2079_3269 333
289 3300049586 Ga0501070_0000191 Ga0501070_0000191_21073_22158 333
290 3300049822 Ga0501035_0061271 Ga0501035_0061271_1250_2335 333
291 3300050496 nmdc:mga07m45_21787_c1 nmdc:mga07m45_21787_c1_32_1138 333
292 iso_pu_bacteria 2643221616 2644096063 333
293 iso_pu_bacteria 2758568522 2760305561 333
294 iso_pu_bacteria 2897561785 2897561981 333
295 iso_pu_bacteria 2964326757 2964327847 333
296 3300002067 JGI24735J21928_10008931 JGI24735J21928_100089312 334
297 3300003578 Ga0006562J51391_1203191 Ga0006562J51391_12031913 334
298 3300003578 Ga0006562J51391_1203192 Ga0006562J51391_12031923 334
299 3300005618 Ga0068864_100168797 Ga0068864_1001687971 334
300 3300014325 Ga0163163_10055352 Ga0163163_100553524 334
301 3300025945 Ga0207679_10044892 Ga0207679_100448923 334
302 3300026116 Ga0207674_10078431 Ga0207674_100784313 334
303 3300048920 Ga0496117_0021565 Ga0496117_0021565_2520_3608 334
304 iso_pu_bacteria 2643221572 2643875299 334
305 iso_pu_bacteria 2643221669 2644382355 334
306 iso_pu_bacteria 2738541272 2738694148 334
307 iso_pu_bacteria 2738543027 2739325314 334
308 iso_pu_bacteria 2739367654 2739609322 334
309 iso_pu_bacteria 2808606394 2809030969 334
310 iso_pu_bacteria 2895660088 2895661388 334
311 iso_pu_bacteria 2928153084 2928156538 334
312 iso_pu_bacteria 2939660829 2939663883 334
313 iso_pu_bacteria 2966921586 2966922497 334
314 iso_pu_bacteria 2966924647 2966927320 334
315 iso_pu_bacteria 8046352972 8046356360 334

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01988

VIT1

VIT family

161

399

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
6iu4-assembly1.cif.gz_A crystal structure of iron transporter vit1 with cobalt ion 0.7342 112 326
6iu4-assembly1.cif.gz_A crystal structure of iron transporter vit1 with cobalt ion 0.6943 112 326
6h2d-assembly1.cif.gz_P structure of the soluble ahlc of the tripartite alpha-pore forming toxin, ahl, from aeromonas hydrophila. 0.2598 61 284
6h2d-assembly1.cif.gz_P structure of the soluble ahlc of the tripartite alpha-pore forming toxin, ahl, from aeromonas hydrophila. 0.2564 61 284
4ke2-assembly1.cif.gz_A crystal structure of the hyperactive type i antifreeze from winter flounder 0.2341 133 331
ID Description Score Start End Superfamily
af_Q4DKQ8_55_270_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.7367 114 326 1.20.1260.10
af_Q54H47_119_343_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.7293 114 322 1.20.1260.10
af_K7MU65_40_256_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.7284 114 326 1.20.1260.10
af_Q4DKQ8_55_270_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.7241 114 326 1.20.1260.10
af_I1K5I4_32_243_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.7197 114 326 1.20.1260.10
ID Description Score Start End GO Terms
AF-A0A4R8VY20-F1-model_v4 Rubrerythrin family protein 0.9549 2 334 GO:0005384
GO:0012505
GO:0016020
GO:0030026
AF-A0A3S3ZB77-F1-model_v4 Rubrerythrin family protein 0.9528 2 334 GO:0005384
GO:0012505
GO:0016020
GO:0030026
AF-A0A4R8VY20-F1-model_v4 Rubrerythrin family protein 0.9493 2 334 GO:0005384
GO:0012505
GO:0016020
GO:0030026
AF-A0A3S3ZB77-F1-model_v4 Rubrerythrin family protein 0.9472 2 334 GO:0005384
GO:0012505
GO:0016020
GO:0030026
AF-A0A2W5RLF1-F1-model_v4 deleted 0.9381 2 334

Feature Viewer

pLDDT pTM Quality
79.63 0.64 Medium
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Predicted Structure (AlphaFold2)

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Map