F403403

General Info

Members Datasets Scaffolds Average Seq Length
315 201 630 201

Family's Representative Sequence

Representative Sequence 3300050510|nmdc:mga06r32_659479_c1|nmdc:mga06r32_659479_c1_88_843
Length 251
Sequence MRSAKTDERPSGWGASCQPDVSSGARAQAYEFFKIVIDDKNCQCCNDSMLEVAVIDDPAAATVALEPVRSRLLSELAEPASAATLATRLGIARQKVNYHLRALESHRLVRVSKKRKWGGLTERLMVATAASYIVSPSALGPVATDAERTRARGADRLSASYLIALAARIIREVGALLRRSEEIDKRLPTLSLDTEIRFRSAAARAAFSDDLTKAITTLAAHYHDESAPGGRPHRLVVVAYPLPHRPTTKET

Samples

Sample ID Description Type Environment
1 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
2 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
39 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
67 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
99 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
100 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
101 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
102 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
103 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
104 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
105 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
106 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
107 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
108 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
109 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
110 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
111 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
112 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
113 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
114 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
115 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
123 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
124 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
125 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
126 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
127 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
128 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
129 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
130 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
131 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
132 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
133 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
134 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
135 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
136 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
137 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
138 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
139 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
140 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
141 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
142 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
143 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
144 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
145 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
146 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
147 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
148 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
149 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
150 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
151 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
152 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
153 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
154 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
155 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
156 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
157 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
158 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
159 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
160 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
161 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
162 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
163 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
164 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
165 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
176 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
177 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
178 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
179 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
180 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
181 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
182 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
184 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
185 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
186 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
187 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
188 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
189 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
190 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
191 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
192 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
193 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
194 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
195 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
196 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
197 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
198 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
199 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
200 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
201 2671180531 Gemmata sp. SH-PL17 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.37
Metatranscriptomes 0.32
Isolates 0.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.81
Nodule 0
Rhizoplane 1.9
Rhizosphere 91.75
Stem 0
Stem Tuber 0
Unclassified 7.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga06r32_659479_c1 3300050510 Unclassified 1014
2 Ga0055531_10000002 3300003794 Bacteria 421971
3 Ga0065707_10104203 3300005295 Bacteria 2705
4 Ga0070676_10702086 3300005328 Bacteria 739
5 Ga0070683_100000011 3300005329 Bacteria 283682
6 Ga0068869_100012377 3300005334 Bacteria 5637
7 Ga0070682_100282625 3300005337 Bacteria 1210
8 Ga0070687_100352665 3300005343 Bacteria 950
9 Ga0070692_10062730 3300005345 Bacteria 1962
10 Ga0070669_100000073 3300005353 Bacteria 99085
11 Ga0070669_100089331 3300005353 Bacteria 2307
12 Ga0070674_100262047 3300005356 Bacteria 1362
13 Ga0070674_100752061 3300005356 Bacteria 838
14 Ga0070713_100558354 3300005436 Bacteria 1085
15 Ga0070705_100081384 3300005440 Bacteria 1990
16 Ga0070700_100007631 3300005441 Bacteria 5852
17 Ga0070694_100007642 3300005444 Bacteria 6598
18 Ga0070694_100073576 3300005444 Bacteria 2360
19 Ga0070694_100467314 3300005444 Bacteria 999
20 Ga0070708_100190076 3300005445 Bacteria 1920
21 Ga0070708_100542068 3300005445 Bacteria 1098
22 Ga0070708_100943207 3300005445 Bacteria 810
23 Ga0070681_10125050 3300005458 Bacteria 2504
24 Ga0070685_10000401 3300005466 Bacteria 25965
25 Ga0070685_10000402 3300005466 Bacteria 25958
26 Ga0070706_100151256 3300005467 Bacteria 2167
27 Ga0070706_100538635 3300005467 Bacteria 1086
28 Ga0070706_100788980 3300005467 Bacteria 879
29 Ga0070707_100018003 3300005468 Bacteria 6645
30 Ga0070707_100054039 3300005468 Bacteria 3850
31 Ga0070707_100066005 3300005468 Unclassified 3477
32 Ga0070707_100843460 3300005468 Bacteria 880
33 Ga0070698_100382233 3300005471 Bacteria 1341
34 Ga0070698_100849813 3300005471 Bacteria 857
35 Ga0070699_100424641 3300005518 Bacteria 1203
36 Ga0070684_100000001 3300005535 Bacteria 300240
37 Ga0070697_100034692 3300005536 Unclassified 4069
38 Ga0070686_100000005 3300005544 Bacteria 248346
39 Ga0070695_100003105 3300005545 Bacteria 9671
40 Ga0070696_100015950 3300005546 Bacteria 5053
41 Ga0070696_100327964 3300005546 Bacteria 1180
42 Ga0070693_100005528 3300005547 Bacteria 6078
43 Ga0070665_100628968 3300005548 Bacteria 1086
44 Ga0070704_100001591 3300005549 Bacteria 12264
45 Ga0070704_100131299 3300005549 Bacteria 1942
46 Ga0070704_100292902 3300005549 Bacteria 1353
47 Ga0068852_100007813 3300005616 Bacteria 7829
48 Ga0068861_100493883 3300005719 Bacteria 1105
49 Ga0068862_100048693 3300005844 Bacteria 3618
50 Ga0068862_100566133 3300005844 Bacteria 1087
51 Ga0081455_10140193 3300005937 Bacteria 1879
52 Ga0070717_10525858 3300006028 Bacteria 1070
53 Ga0075365_10040573 3300006038 Unclassified 3036
54 Ga0075364_10017666 3300006051 Bacteria 4460
55 Ga0070716_100845844 3300006173 Bacteria 712
56 Ga0075362_10011221 3300006177 Unclassified 3526
57 Ga0075362_10302349 3300006177 Bacteria 794
58 Ga0068871_100609215 3300006358 Bacteria 994
59 Ga0075428_100025760 3300006844 Bacteria 6513
60 Ga0075428_100026725 3300006844 Bacteria 6391
61 Ga0075428_100107083 3300006844 Bacteria 3047
62 Ga0075428_100309917 3300006844 Bacteria 1697
63 Ga0075428_100401903 3300006844 Bacteria 1468
64 Ga0075428_100696989 3300006844 Bacteria 1082
65 Ga0075430_100231364 3300006846 Bacteria 1532
66 Ga0075431_100052640 3300006847 Bacteria 4198
67 Ga0075431_100053581 3300006847 Bacteria 4159
68 Ga0075433_10076568 3300006852 Bacteria 2946
69 Ga0075434_100288679 3300006871 Bacteria 1660
70 Ga0075434_100793273 3300006871 Bacteria 963
71 Ga0075429_100006721 3300006880 Bacteria 9974
72 Ga0075429_100012699 3300006880 Bacteria 7306
73 Ga0075429_100040197 3300006880 Bacteria 4071
74 Ga0075429_100418195 3300006880 Bacteria 1174
75 Ga0075436_100134445 3300006914 Bacteria 1736
76 Ga0075435_100048070 3300007076 Unclassified 3426
77 Ga0075435_100130897 3300007076 Bacteria 2099
78 Ga0075435_100274900 3300007076 Bacteria 1437
79 Ga0075435_100799465 3300007076 Archaea 821
80 Ga0111539_10013754 3300009094 Bacteria 10108
81 Ga0111539_10051635 3300009094 Bacteria 4896
82 Ga0111539_10113833 3300009094 Bacteria 3173
83 Ga0111539_10195951 3300009094 Bacteria 2356
84 Ga0105247_10029910 3300009101 Bacteria 3302
85 Ga0114129_10012004 3300009147 Bacteria 12320
86 Ga0114129_10082294 3300009147 Bacteria 4473
87 Ga0114129_10126775 3300009147 Bacteria 3509
88 Ga0114129_10174850 3300009147 Bacteria 2925
89 Ga0114129_10633412 3300009147 Bacteria 1382
90 Ga0114129_10799803 3300009147 Bacteria 1203
91 Ga0105243_10521805 3300009148 Bacteria 1130
92 Ga0105238_10000564 3300009551 Bacteria 38884
93 Ga0105249_10046295 3300009553 Bacteria 3958
94 Ga0099796_10091906 3300010159 Bacteria 1129
95 Ga0105239_11459405 3300010375 Bacteria 790
96 Ga0105246_10128800 3300011119 Bacteria 1887
97 Ga0157378_10604722 3300013297 Bacteria 1108
98 Ga0163162_10022014 3300013306 Bacteria 6280
99 Ga0157375_11195598 3300013308 Unclassified 892
100 Ga0163163_10358445 3300014325 Bacteria 1515
101 Ga0157380_10426118 3300014326 Bacteria 1267
102 Ga0157377_10743032 3300014745 Bacteria 717
103 Ga0157379_10496562 3300014968 Bacteria 1131
104 Ga0163161_10558336 3300017792 Bacteria 939
105 Ga0213873_10045110 3300021358 Bacteria 1149
106 Ga0209050_1004982 3300025298 Bacteria 8643
107 Ga0209051_1063389 3300025303 Bacteria 1151
108 Ga0209257_1000049 3300025304 Bacteria 441224
109 Ga0207682_10175325 3300025893 Bacteria 977
110 Ga0207645_10598991 3300025907 Bacteria 748
111 Ga0207684_10237105 3300025910 Bacteria 1574
112 Ga0207684_10455632 3300025910 Bacteria 1098
113 Ga0207707_10102147 3300025912 Bacteria 2506
114 Ga0207693_10122157 3300025915 Bacteria 2045
115 Ga0207646_10003517 3300025922 Bacteria 17649
116 Ga0207646_10034514 3300025922 Bacteria 4571
117 Ga0207646_10052102 3300025922 Unclassified 3662
118 Ga0207681_10000064 3300025923 Bacteria 99054
119 Ga0207681_10046887 3300025923 Bacteria 2908
120 Ga0207694_10000013 3300025924 Bacteria 384823
121 Ga0207650_10563435 3300025925 Unclassified 956
122 Ga0207659_10846678 3300025926 Bacteria 786
123 Ga0207700_10770021 3300025928 Bacteria 860
124 Ga0207691_10156565 3300025940 Bacteria 2001
125 Ga0207689_10022771 3300025942 Bacteria 5263
126 Ga0207661_10000016 3300025944 Bacteria 305159
127 Ga0207667_10238155 3300025949 Bacteria 1863
128 Ga0207712_10001990 3300025961 Bacteria 13406
129 Ga0207668_10180782 3300025972 Bacteria 1663
130 Ga0207678_10295125 3300026067 Bacteria 1392
131 Ga0207708_10129741 3300026075 Bacteria 1970
132 Ga0207641_10230885 3300026088 Bacteria 1720
133 Ga0207648_10451250 3300026089 Bacteria 1171
134 Ga0207675_100392239 3300026118 Bacteria 1367
135 Ga0207683_10773547 3300026121 Bacteria 891
136 Ga0207698_10012580 3300026142 Bacteria 5545
137 Ga0207428_10791995 3300027907 Bacteria 674
138 Ga0268266_10027783 3300028379 Bacteria 4811
139 Ga0268265_10111609 3300028380 Bacteria 2233
140 Ga0265760_10014332 3300031090 Bacteria 2270
141 Ga0265332_10025235 3300031238 Bacteria 2611
142 Ga0265314_10031245 3300031711 Bacteria 3934
143 Ga0307413_10019054 3300031824 Bacteria 3616
144 Ga0307410_10388022 3300031852 Bacteria 1125
145 Ga0307406_10012607 3300031901 Bacteria 4821
146 Ga0307409_100001075 3300031995 Bacteria 12880
147 Ga0307409_100357770 3300031995 Unclassified 1380
148 Ga0307416_100009357 3300032002 Bacteria 6409
149 Ga0307416_100323432 3300032002 Bacteria 1546
150 Ga0307415_100000065 3300032126 Bacteria 43936
151 Ga0307415_100626204 3300032126 Unclassified 961
152 Ga0307415_100776231 3300032126 Bacteria 872
153 Ga0373959_0000270 3300034820 Bacteria 11184
154 Ga0373934_0000311 3300035086 Bacteria 17066
155 Ga0373953_0019488 3300035117 Bacteria 2524
156 Ga0373953_0203874 3300035117 Bacteria 856
157 Ga0373954_0128578 3300035118 Bacteria 1232
158 Ga0373956_0020701 3300035119 Bacteria 2802
159 Ga0373961_0045505 3300035241 Bacteria 1284
160 Ga0373924_0206569 3300035410 Bacteria 867
161 Ga0373924_0287701 3300035410 Bacteria 729
162 Ga0373933_0052885 3300035724 Bacteria 2431
163 Ga0373937_0224267 3300036401 Bacteria 1769
164 Ga0395900_0129241 3300037418 Bacteria 2590
165 Ga0395898_0144629 3300037466 Bacteria 2276
166 Ga0395905_0006241 3300037471 Bacteria 12034
167 Ga0436364_0060793 3300037853 Bacteria 895
168 Ga0436364_1139548 3300037853 Bacteria 759
169 Ga0395901_0023211 3300038443 Bacteria 6359
170 Ga0400485_17274 3300038735 Bacteria 7451
171 Ga0436365_1679689 3300039437 Bacteria 1090
172 Ga0436360_0212996 3300039438 Bacteria 753
173 Ga0436360_0627093 3300039438 Bacteria 1615
174 Ga0436360_1328397 3300039438 Bacteria 633
175 Ga0436361_0171758 3300039447 Bacteria 1092
176 Ga0436361_0488892 3300039447 Bacteria 712
177 Ga0436361_0972949 3300039447 Bacteria 966
178 Ga0436361_1022955 3300039447 Bacteria 782
179 Ga0436363_0511387 3300039450 Bacteria 775
180 Ga0436363_1087282 3300039450 Bacteria 833
181 Ga0436362_0483958 3300039453 Bacteria 673
182 Ga0436362_0842841 3300039453 Bacteria 917
183 Ga0436362_1082200 3300039453 Bacteria 758
184 Ga0451853_3647416 3300041512 Unclassified 619
185 Ga0439460_0022351 3300042461 Bacteria 1734
186 Ga0451577_0205599 3300042876 Bacteria 1778
187 Ga0453683_0068867 3300044673 Bacteria 2212
188 Ga0453683_0121967 3300044673 Bacteria 1641
189 Ga0453683_0269356 3300044673 Bacteria 1087
190 Ga0451576_0069213 3300045051 Bacteria 3672
191 Ga0451576_0117262 3300045051 Bacteria 2771
192 Ga0451576_0142612 3300045051 Bacteria 2498
193 Ga0495592_0014089 3300046454 Bacteria 6074
194 Ga0495629_0263735 3300046459 Bacteria 1184
195 Ga0495629_0637293 3300046459 Bacteria 711
196 Ga0495638_0094335 3300046460 Bacteria 1799
197 Ga0495641_0199773 3300046461 Bacteria 896
198 Ga0495651_0347310 3300046462 Bacteria 981
199 Ga0495582_0016028 3300046473 Bacteria 4109
200 Ga0495582_0451053 3300046473 Bacteria 743
201 Ga0495639_0235455 3300046475 Bacteria 903
202 Ga0495662_0176329 3300046476 Bacteria 1053
203 Ga0495594_0020462 3300046499 Bacteria 3524
204 Ga0495594_0159764 3300046499 Bacteria 1281
205 Ga0495594_0235871 3300046499 Bacteria 1043
206 Ga0495608_0141306 3300046511 Bacteria 1536
207 Ga0495618_0505493 3300046514 Bacteria 728
208 Ga0495628_0000816 3300046516 Bacteria 28807
209 Ga0495628_0036046 3300046516 Bacteria 3973
210 Ga0495628_0095344 3300046516 Bacteria 2299
211 Ga0495630_0000022 3300046517 Bacteria 172932
212 Ga0495630_0012448 3300046517 Bacteria 6177
213 Ga0495630_0675969 3300046517 Bacteria 790
214 Ga0495666_0013090 3300046526 Bacteria 4134
215 Ga0495652_0242919 3300046529 Bacteria 1339
216 Ga0495586_0000010 3300046535 Bacteria 143135
217 Ga0495586_0015472 3300046535 Bacteria 4058
218 Ga0495645_0040318 3300046543 Bacteria 3407
219 Ga0495634_0038762 3300046642 Bacteria 3247
220 Ga0495634_0242365 3300046642 Bacteria 1105
221 Ga0495657_0023507 3300046675 Bacteria 4403
222 Ga0495599_0065344 3300046678 Bacteria 2273
223 Ga0495599_0582744 3300046678 Bacteria 653
224 Ga0495647_0011534 3300046681 Bacteria 3029
225 Ga0495647_0023501 3300046681 Bacteria 2235
226 Ga0495658_0013604 3300046683 Bacteria 4144
227 Ga0495658_0330758 3300046683 Bacteria 967
228 Ga0495613_0033863 3300046689 Bacteria 3794
229 Ga0495613_0076909 3300046689 Bacteria 2428
230 Ga0495613_0360904 3300046689 Bacteria 996
231 Ga0495624_0258675 3300046690 Bacteria 1052
232 Ga0495624_0585478 3300046690 Bacteria 665
233 Ga0495600_0027618 3300046809 Bacteria 3668
234 Ga0495600_0373293 3300046809 Bacteria 891
235 Ga0495604_0029896 3300047317 Bacteria 4333
236 Ga0495676_0062514 3300047321 Bacteria 2906
237 Ga0495676_0083543 3300047321 Bacteria 2413
238 Ga0495680_0430683 3300047322 Bacteria 906
239 Ga0495675_0278684 3300047444 Bacteria 997
240 Ga0496101_0489652 3300048904 Bacteria 971
241 Ga0496102_0222193 3300048905 Bacteria 1781
242 Ga0496109_0940523 3300048912 Bacteria 802
243 Ga0496112_0563197 3300048915 Bacteria 1073
244 Ga0496112_0707955 3300048915 Bacteria 935
245 Ga0496114_1026680 3300048917 Bacteria 708
246 Ga0501031_0029640 3300049568 Bacteria 3570
247 Ga0501031_0077857 3300049568 Bacteria 2160
248 Ga0501034_0137084 3300049571 Bacteria 2428
249 Ga0501036_0067845 3300049572 Bacteria 3018
250 Ga0501036_0219714 3300049572 Bacteria 1596
251 Ga0501039_0007820 3300049575 Bacteria 8153
252 Ga0501040_0014019 3300049576 Bacteria 5277
253 Ga0501040_0103340 3300049576 Bacteria 1989
254 Ga0501040_0354530 3300049576 Unclassified 1051
255 Ga0501041_0013292 3300049577 Bacteria 4878
256 Ga0501042_0107814 3300049578 Unclassified 2005
257 Ga0501042_0141922 3300049578 Bacteria 1732
258 Ga0501042_0459974 3300049578 Bacteria 923
259 Ga0501043_0214132 3300049579 Bacteria 1493
260 Ga0501043_0442267 3300049579 Bacteria 978
261 Ga0501046_0152023 3300049580 Unclassified 1746
262 Ga0501048_0135565 3300049582 Unclassified 1740
263 Ga0501071_0016531 3300049587 Bacteria 5076
264 Ga0501071_0062155 3300049587 Bacteria 2705
265 Ga0501072_0108697 3300049588 Bacteria 2207
266 Ga0501072_0445975 3300049588 Unclassified 1025
267 Ga0501072_0746958 3300049588 Bacteria 768
268 Ga0501075_0183082 3300049591 Bacteria 1598
269 Ga0501076_0038977 3300049592 Bacteria 3730
270 Ga0501076_0448734 3300049592 Unclassified 1062
271 Ga0501079_0091831 3300049741 Bacteria 2352
272 Ga0501079_0137668 3300049741 Bacteria 1902
273 Ga0501080_0330045 3300049742 Bacteria 1380
274 Ga0501080_0530346 3300049742 Unclassified 1050
275 Ga0501081_0060399 3300049743 Bacteria 2626
276 Ga0501081_0169274 3300049743 Unclassified 1577
277 Ga0501035_0342729 3300049822 Bacteria 1252
278 Ga0501045_0063910 3300049824 Bacteria 2701
279 nmdc:mga0yw44_320600_c1 3300050492 Bacteria 1040
280 nmdc:mga06z11_375776_c1 3300050494 Bacteria 853
281 nmdc:mga05p37_480166_c1 3300050507 Bacteria 1432
282 nmdc:mga05p37_56391_c1 3300050507 Bacteria 4837
283 nmdc:mga05p37_6950_c1 3300050507 Bacteria 13336
284 nmdc:mga09592_101551_c1 3300050508 Bacteria 2464
285 nmdc:mga09592_45265_c1 3300050508 Bacteria 3706
286 nmdc:mga09592_730578_c1 3300050508 Bacteria 841
287 nmdc:mga09592_7373_c1 3300050508 Bacteria 8941
288 nmdc:mga06r32_1215906_c1 3300050510 Unclassified 699
289 nmdc:mga06r32_4301_c1 3300050510 Bacteria 12747
290 nmdc:mga06r32_80800_c1 3300050510 Bacteria 3164
291 nmdc:mga08y16_204882_c1 3300050511 Bacteria 2044
292 nmdc:mga08y16_42097_c1 3300050511 Bacteria 4783
293 nmdc:mga0n895_304109_c1 3300050512 Bacteria 1617
294 nmdc:mga0n895_752765_c1 3300050512 Unclassified 967
295 nmdc:mga0rr50_112069_c1 3300050513 Bacteria 2160
296 nmdc:mga0rr50_123926_c1 3300050513 Unclassified 2061
297 nmdc:mga0rr50_91703_c1 3300050513 Bacteria 2367
298 nmdc:mga0a205_145992_c1 3300050515 Bacteria 2266
299 nmdc:mga0a205_49564_c1 3300050515 Bacteria 4054
300 Ga0495601_0005251 3300053077 Bacteria 7539
301 Ga0495595_0039191 3300053084 Bacteria 2161
302 Ga0495619_0063678 3300053085 Bacteria 2457
303 Ga0495619_0133334 3300053085 Bacteria 1708
304 Ga0500658_0053172 3300053134 Bacteria 1661
305 Ga0500568_0000259 3300053139 Bacteria 44872
306 Ga0501084_0243647 3300054114 Bacteria 1517
307 Ga0501084_0833989 3300054114 Unclassified 776
308 Ga0501084_0870529 3300054114 Bacteria 758
309 Ga0590075_009260 3300059424 Bacteria 2357
310 Ga0501082_0412554 3300060353 Bacteria 1179
311 Ga0501082_0427362 3300060353 Unclassified 1157
312 Ga0530510_0013691 3300061734 Bacteria 5709
313 Ga0530510_0017914 3300061734 Bacteria 5022
314 Ga0530510_0290024 3300061734 Bacteria 1223
315 2673168746 2671180531 Bacteria 9045424
316 nmdc:mga06r32_659479_c1
317 Ga0055531_10000002
318 Ga0065707_10104203
319 Ga0070676_10702086
320 Ga0070683_100000011
321 Ga0068869_100012377
322 Ga0070682_100282625
323 Ga0070687_100352665
324 Ga0070692_10062730
325 Ga0070669_100000073
326 Ga0070669_100089331
327 Ga0070674_100262047
328 Ga0070674_100752061
329 Ga0070713_100558354
330 Ga0070705_100081384
331 Ga0070700_100007631
332 Ga0070694_100007642
333 Ga0070694_100073576
334 Ga0070694_100467314
335 Ga0070708_100190076
336 Ga0070708_100542068
337 Ga0070708_100943207
338 Ga0070681_10125050
339 Ga0070685_10000401
340 Ga0070685_10000402
341 Ga0070706_100151256
342 Ga0070706_100538635
343 Ga0070706_100788980
344 Ga0070707_100018003
345 Ga0070707_100054039
346 Ga0070707_100066005
347 Ga0070707_100843460
348 Ga0070698_100382233
349 Ga0070698_100849813
350 Ga0070699_100424641
351 Ga0070684_100000001
352 Ga0070697_100034692
353 Ga0070686_100000005
354 Ga0070695_100003105
355 Ga0070696_100015950
356 Ga0070696_100327964
357 Ga0070693_100005528
358 Ga0070665_100628968
359 Ga0070704_100001591
360 Ga0070704_100131299
361 Ga0070704_100292902
362 Ga0068852_100007813
363 Ga0068861_100493883
364 Ga0068862_100048693
365 Ga0068862_100566133
366 Ga0081455_10140193
367 Ga0070717_10525858
368 Ga0075365_10040573
369 Ga0075364_10017666
370 Ga0070716_100845844
371 Ga0075362_10011221
372 Ga0075362_10302349
373 Ga0068871_100609215
374 Ga0075428_100025760
375 Ga0075428_100026725
376 Ga0075428_100107083
377 Ga0075428_100309917
378 Ga0075428_100401903
379 Ga0075428_100696989
380 Ga0075430_100231364
381 Ga0075431_100052640
382 Ga0075431_100053581
383 Ga0075433_10076568
384 Ga0075434_100288679
385 Ga0075434_100793273
386 Ga0075429_100006721
387 Ga0075429_100012699
388 Ga0075429_100040197
389 Ga0075429_100418195
390 Ga0075436_100134445
391 Ga0075435_100048070
392 Ga0075435_100130897
393 Ga0075435_100274900
394 Ga0075435_100799465
395 Ga0111539_10013754
396 Ga0111539_10051635
397 Ga0111539_10113833
398 Ga0111539_10195951
399 Ga0105247_10029910
400 Ga0114129_10012004
401 Ga0114129_10082294
402 Ga0114129_10126775
403 Ga0114129_10174850
404 Ga0114129_10633412
405 Ga0114129_10799803
406 Ga0105243_10521805
407 Ga0105238_10000564
408 Ga0105249_10046295
409 Ga0099796_10091906
410 Ga0105239_11459405
411 Ga0105246_10128800
412 Ga0157378_10604722
413 Ga0163162_10022014
414 Ga0157375_11195598
415 Ga0163163_10358445
416 Ga0157380_10426118
417 Ga0157377_10743032
418 Ga0157379_10496562
419 Ga0163161_10558336
420 Ga0213873_10045110
421 Ga0209050_1004982
422 Ga0209051_1063389
423 Ga0209257_1000049
424 Ga0207682_10175325
425 Ga0207645_10598991
426 Ga0207684_10237105
427 Ga0207684_10455632
428 Ga0207707_10102147
429 Ga0207693_10122157
430 Ga0207646_10003517
431 Ga0207646_10034514
432 Ga0207646_10052102
433 Ga0207681_10000064
434 Ga0207681_10046887
435 Ga0207694_10000013
436 Ga0207650_10563435
437 Ga0207659_10846678
438 Ga0207700_10770021
439 Ga0207691_10156565
440 Ga0207689_10022771
441 Ga0207661_10000016
442 Ga0207667_10238155
443 Ga0207712_10001990
444 Ga0207668_10180782
445 Ga0207678_10295125
446 Ga0207708_10129741
447 Ga0207641_10230885
448 Ga0207648_10451250
449 Ga0207675_100392239
450 Ga0207683_10773547
451 Ga0207698_10012580
452 Ga0207428_10791995
453 Ga0268266_10027783
454 Ga0268265_10111609
455 Ga0265760_10014332
456 Ga0265332_10025235
457 Ga0265314_10031245
458 Ga0307413_10019054
459 Ga0307410_10388022
460 Ga0307406_10012607
461 Ga0307409_100001075
462 Ga0307409_100357770
463 Ga0307416_100009357
464 Ga0307416_100323432
465 Ga0307415_100000065
466 Ga0307415_100626204
467 Ga0307415_100776231
468 Ga0373959_0000270
469 Ga0373934_0000311
470 Ga0373953_0019488
471 Ga0373953_0203874
472 Ga0373954_0128578
473 Ga0373956_0020701
474 Ga0373961_0045505
475 Ga0373924_0206569
476 Ga0373924_0287701
477 Ga0373933_0052885
478 Ga0373937_0224267
479 Ga0395900_0129241
480 Ga0395898_0144629
481 Ga0395905_0006241
482 Ga0436364_0060793
483 Ga0436364_1139548
484 Ga0395901_0023211
485 Ga0400485_17274
486 Ga0436365_1679689
487 Ga0436360_0212996
488 Ga0436360_0627093
489 Ga0436360_1328397
490 Ga0436361_0171758
491 Ga0436361_0488892
492 Ga0436361_0972949
493 Ga0436361_1022955
494 Ga0436363_0511387
495 Ga0436363_1087282
496 Ga0436362_0483958
497 Ga0436362_0842841
498 Ga0436362_1082200
499 Ga0451853_3647416
500 Ga0439460_0022351
501 Ga0451577_0205599
502 Ga0453683_0068867
503 Ga0453683_0121967
504 Ga0453683_0269356
505 Ga0451576_0069213
506 Ga0451576_0117262
507 Ga0451576_0142612
508 Ga0495592_0014089
509 Ga0495629_0263735
510 Ga0495629_0637293
511 Ga0495638_0094335
512 Ga0495641_0199773
513 Ga0495651_0347310
514 Ga0495582_0016028
515 Ga0495582_0451053
516 Ga0495639_0235455
517 Ga0495662_0176329
518 Ga0495594_0020462
519 Ga0495594_0159764
520 Ga0495594_0235871
521 Ga0495608_0141306
522 Ga0495618_0505493
523 Ga0495628_0000816
524 Ga0495628_0036046
525 Ga0495628_0095344
526 Ga0495630_0000022
527 Ga0495630_0012448
528 Ga0495630_0675969
529 Ga0495666_0013090
530 Ga0495652_0242919
531 Ga0495586_0000010
532 Ga0495586_0015472
533 Ga0495645_0040318
534 Ga0495634_0038762
535 Ga0495634_0242365
536 Ga0495657_0023507
537 Ga0495599_0065344
538 Ga0495599_0582744
539 Ga0495647_0011534
540 Ga0495647_0023501
541 Ga0495658_0013604
542 Ga0495658_0330758
543 Ga0495613_0033863
544 Ga0495613_0076909
545 Ga0495613_0360904
546 Ga0495624_0258675
547 Ga0495624_0585478
548 Ga0495600_0027618
549 Ga0495600_0373293
550 Ga0495604_0029896
551 Ga0495676_0062514
552 Ga0495676_0083543
553 Ga0495680_0430683
554 Ga0495675_0278684
555 Ga0496101_0489652
556 Ga0496102_0222193
557 Ga0496109_0940523
558 Ga0496112_0563197
559 Ga0496112_0707955
560 Ga0496114_1026680
561 Ga0501031_0029640
562 Ga0501031_0077857
563 Ga0501034_0137084
564 Ga0501036_0067845
565 Ga0501036_0219714
566 Ga0501039_0007820
567 Ga0501040_0014019
568 Ga0501040_0103340
569 Ga0501040_0354530
570 Ga0501041_0013292
571 Ga0501042_0107814
572 Ga0501042_0141922
573 Ga0501042_0459974
574 Ga0501043_0214132
575 Ga0501043_0442267
576 Ga0501046_0152023
577 Ga0501048_0135565
578 Ga0501071_0016531
579 Ga0501071_0062155
580 Ga0501072_0108697
581 Ga0501072_0445975
582 Ga0501072_0746958
583 Ga0501075_0183082
584 Ga0501076_0038977
585 Ga0501076_0448734
586 Ga0501079_0091831
587 Ga0501079_0137668
588 Ga0501080_0330045
589 Ga0501080_0530346
590 Ga0501081_0060399
591 Ga0501081_0169274
592 Ga0501035_0342729
593 Ga0501045_0063910
594 nmdc:mga0yw44_320600_c1
595 nmdc:mga06z11_375776_c1
596 nmdc:mga05p37_480166_c1
597 nmdc:mga05p37_56391_c1
598 nmdc:mga05p37_6950_c1
599 nmdc:mga09592_101551_c1
600 nmdc:mga09592_45265_c1
601 nmdc:mga09592_730578_c1
602 nmdc:mga09592_7373_c1
603 nmdc:mga06r32_1215906_c1
604 nmdc:mga06r32_4301_c1
605 nmdc:mga06r32_80800_c1
606 nmdc:mga08y16_204882_c1
607 nmdc:mga08y16_42097_c1
608 nmdc:mga0n895_304109_c1
609 nmdc:mga0n895_752765_c1
610 nmdc:mga0rr50_112069_c1
611 nmdc:mga0rr50_123926_c1
612 nmdc:mga0rr50_91703_c1
613 nmdc:mga0a205_145992_c1
614 nmdc:mga0a205_49564_c1
615 Ga0495601_0005251
616 Ga0495595_0039191
617 Ga0495619_0063678
618 Ga0495619_0133334
619 Ga0500658_0053172
620 Ga0500568_0000259
621 Ga0501084_0243647
622 Ga0501084_0833989
623 Ga0501084_0870529
624 Ga0590075_009260
625 Ga0501082_0412554
626 Ga0501082_0427362
627 Ga0530510_0013691
628 Ga0530510_0017914
629 Ga0530510_0290024
630 2673168746

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12840

HTH_20

Helix-turn-helix domain

64

112

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3f72-assembly2.cif.gz_D crystal structure of the staphylococcus aureus pi258 cadc metal binding site 2 mutant 0.9533 11 62
2p8t-assembly1.cif.gz_A hypothetical protein ph0730 from pyrococcus horikoshii ot3 0.9345 20 62
3f72-assembly3.cif.gz_E crystal structure of the staphylococcus aureus pi258 cadc metal binding site 2 mutant 0.9158 11 80
1u2w-assembly1.cif.gz_A crystal structure of the staphylococcus aureus pi258 cadc 0.9152 11 80
7rhe-assembly1.cif.gz_A-2 crystal structure of rok family protein from burkholderia vietnamiensis g4 0.9068 20 79
ID Description Score Start End Superfamily
3f72D00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9533 11 62 1.10.10.10
1ulyA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9491 1 86 1.10.10.10
af_Q2G033_15_91_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.943 21 64 1.10.10.10
2p8tA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9345 20 62 1.10.10.10
1ulyA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9172 1 86 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A662JEJ3-F1-model_v4 HTH arsR-type domain-containing protein 0.9826 11 79 GO:0003700
AF-A0A662W1U1-F1-model_v4 HTH arsR-type domain-containing protein 0.9799 17 80 GO:0003700
AF-A0A6B1KAE5-F1-model_v4 deleted 0.9736 1 93
AF-A0A0M0BTG6-F1-model_v4 HTH arsR-type domain-containing protein 0.9722 4 86 GO:0003700
AF-A0A7X9A2Z5-F1-model_v4 Helix-turn-helix transcriptional regulator 0.9707 1 86

Map