F403388

General Info

Members Datasets Scaffolds Average Seq Length
315 190 302 216

Family's Representative Sequence

Representative Sequence 3300049592|Ga0501076_0209521|Ga0501076_0209521_83_859
Length 258
Sequence VERSNPPARQPSRESRVPELQRTDPRQGALAHTPTVDREPLGAGRTVVIADDDLLLREGIASLLTQAGYGVVGQAGDATELMSLVREHRPELAIVDIRMPPDHATEGLRAAQEIRDEMPEVAILVLSAYVEVKHATTLLASGQRSGYLLKSRVANIDEFLESVDRLSRGGSVVDPSLVVELLATRAAEDPLEVLTSREHEVLGLMAEGRTNAGIARRLWVTEGTVEKHVHSIFVKLRLPETDDDHRRVLAVVAFLGAR

Samples

Sample ID Description Type Environment
1 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
2 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
3 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
4 2739367653 Kocuria sp. OV113 Isolate Unclassified
5 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
6 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
7 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
8 2857727296 Kocuria sp. R-72562 Isolate Unclassified
9 2920879853 Kocuria salina CV6 Isolate Unclassified
10 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
44 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
45 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
46 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
47 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
60 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
96 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
97 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
98 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
99 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
100 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
101 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
102 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
103 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
104 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
110 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
111 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
112 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
113 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
114 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
115 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
116 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
117 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
118 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
119 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
120 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
121 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
122 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
123 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
124 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
125 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
126 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
127 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
128 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
129 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
130 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
131 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
132 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
133 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
134 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
135 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
136 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
137 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
138 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
139 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
140 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
141 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
142 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
157 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
158 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
159 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
160 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
161 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
162 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
163 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
164 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
165 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
166 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
167 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
168 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
169 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
172 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
173 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
174 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
175 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
178 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
179 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
180 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
181 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
182 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
183 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
184 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
185 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
186 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
187 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
188 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
189 8002775197 Frankia nepalensis CN7 Isolate Nodule
190 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.87
Metatranscriptomes 0.32
Isolates 3.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.35
Nodule 0.32
Rhizoplane 5.08
Rhizosphere 84.44
Stem 0
Stem Tuber 0
Unclassified 3.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10088168 3300005327 Bacteria 2555
2 Ga0070658_10255876 3300005327 Bacteria 1486
3 Ga0070676_10047747 3300005328 Bacteria 2501
4 Ga0070683_100591318 3300005329 Bacteria 1062
5 Ga0070683_100782712 3300005329 Bacteria 914
6 Ga0070682_100901145 3300005337 Bacteria 727
7 Ga0070661_100156556 3300005344 Bacteria 1724
8 Ga0070668_100048975 3300005347 Bacteria 3251
9 Ga0070668_100066291 3300005347 Bacteria 2802
10 Ga0070671_100000665 3300005355 Bacteria 24611
11 Ga0070671_100089488 3300005355 Bacteria 2577
12 Ga0070659_100074595 3300005366 Bacteria 2702
13 Ga0070659_100150244 3300005366 Bacteria 1900
14 Ga0070714_100008377 3300005435 Bacteria 8068
15 Ga0070714_100163504 3300005435 Bacteria 2015
16 Ga0070713_100082065 3300005436 Bacteria 2752
17 Ga0070710_10126009 3300005437 Bacteria 1556
18 Ga0070678_100092369 3300005456 Bacteria 2325
19 Ga0070678_100569013 3300005456 Bacteria 1008
20 Ga0070681_10318754 3300005458 Bacteria 1464
21 Ga0068867_100229473 3300005459 Bacteria 1500
22 Ga0070706_100141603 3300005467 Bacteria 2245
23 Ga0070707_100003803 3300005468 Bacteria 14241
24 Ga0070707_100391780 3300005468 Bacteria 1349
25 Ga0070698_100155970 3300005471 Bacteria 2228
26 Ga0070698_100366549 3300005471 Bacteria 1373
27 Ga0070698_100695696 3300005471 Bacteria 958
28 Ga0070696_100074458 3300005546 Bacteria 2395
29 Ga0070665_100003868 3300005548 Bacteria 15847
30 Ga0070665_100196204 3300005548 Bacteria 2020
31 Ga0070665_100262974 3300005548 Bacteria 1726
32 Ga0068857_100236227 3300005577 Bacteria 1672
33 Ga0068854_100060421 3300005578 Bacteria 2742
34 Ga0070702_100131819 3300005615 Bacteria 1580
35 Ga0068859_101055690 3300005617 Bacteria 893
36 Ga0068864_100443958 3300005618 Bacteria 1240
37 Ga0068864_100482966 3300005618 Bacteria 1189
38 Ga0068861_100059244 3300005719 Bacteria 2931
39 Ga0068870_10157447 3300005840 Bacteria 1344
40 Ga0068870_10210986 3300005840 Bacteria 1183
41 Ga0068858_100189545 3300005842 Bacteria 1943
42 Ga0068860_100000237 3300005843 Bacteria 84631
43 Ga0068860_100011645 3300005843 Bacteria 8675
44 Ga0068860_100433055 3300005843 Bacteria 1305
45 Ga0068862_100230771 3300005844 Bacteria 1679
46 Ga0081455_10013909 3300005937 Bacteria 7910
47 Ga0081455_10017368 3300005937 Bacteria 6902
48 Ga0081455_10139147 3300005937 Bacteria 1888
49 Ga0081540_1000551 3300005983 Bacteria 36299
50 Ga0070717_10235187 3300006028 Bacteria 1614
51 Ga0075365_10009153 3300006038 Bacteria 5674
52 Ga0075365_10014193 3300006038 Bacteria 4787
53 Ga0075365_10027652 3300006038 Bacteria 3611
54 Ga0075365_10052332 3300006038 Bacteria 2700
55 Ga0075365_10438717 3300006038 Bacteria 922
56 Ga0075365_10697846 3300006038 Bacteria 717
57 Ga0075365_10759141 3300006038 Bacteria 685
58 Ga0075368_10134974 3300006042 Bacteria 1027
59 Ga0075363_100372039 3300006048 Bacteria 837
60 Ga0075364_10091541 3300006051 Bacteria 2018
61 Ga0075367_10034935 3300006178 Bacteria 2907
62 Ga0068871_100344284 3300006358 Bacteria 1317
63 Ga0075428_100536250 3300006844 Bacteria 1251
64 Ga0075428_100651744 3300006844 Bacteria 1123
65 Ga0075430_100002542 3300006846 Bacteria 15213
66 Ga0075430_100362133 3300006846 Bacteria 1197
67 Ga0075431_100000104 3300006847 Bacteria 53256
68 Ga0075433_10031329 3300006852 Bacteria 4545
69 Ga0075433_10165249 3300006852 Bacteria 1970
70 Ga0075434_100069684 3300006871 Bacteria 3506
71 Ga0075434_100094823 3300006871 Bacteria 2989
72 Ga0075429_100000172 3300006880 Bacteria 41602
73 Ga0075429_100058903 3300006880 Bacteria 3345
74 Ga0075436_100002205 3300006914 Bacteria 13445
75 Ga0075436_100014670 3300006914 Bacteria 5372
76 Ga0097620_101055657 3300006931 Bacteria 893
77 Ga0075435_100034477 3300007076 Bacteria 4011
78 Ga0111539_10097586 3300009094 Bacteria 3452
79 Ga0105245_10064073 3300009098 Bacteria 3321
80 Ga0105247_10179522 3300009101 Bacteria 1412
81 Ga0114129_10012016 3300009147 Bacteria 12316
82 Ga0114129_10519414 3300009147 Bacteria 1553
83 Ga0105243_10028149 3300009148 Bacteria 4312
84 Ga0105249_10002109 3300009553 Bacteria 17259
85 Ga0105249_10415302 3300009553 Bacteria 1378
86 Ga0105239_10057799 3300010375 Bacteria 4255
87 Ga0105246_10219044 3300011119 Bacteria 1491
88 Ga0157378_10004374 3300013297 Bacteria 12435
89 Ga0157378_10405050 3300013297 Bacteria 1345
90 Ga0163162_10036750 3300013306 Bacteria 4883
91 Ga0157372_10396194 3300013307 Bacteria 1609
92 Ga0157372_11229913 3300013307 Bacteria 865
93 Ga0157375_10589970 3300013308 Bacteria 1271
94 Ga0163163_10469695 3300014325 Bacteria 1319
95 Ga0157379_10314976 3300014968 Bacteria 1428
96 Ga0157379_10393809 3300014968 Bacteria 1272
97 Ga0157376_10480817 3300014969 Bacteria 1217
98 Ga0206354_11400587 3300020081 Bacteria 1203
99 Ga0207645_10058197 3300025907 Bacteria 2468
100 Ga0207643_10237843 3300025908 Bacteria 1119
101 Ga0207705_10055324 3300025909 Bacteria 2861
102 Ga0207705_10247519 3300025909 Bacteria 1359
103 Ga0207707_10330694 3300025912 Bacteria 1315
104 Ga0207693_10060328 3300025915 Bacteria 2971
105 Ga0207646_10000034 3300025922 Bacteria 212493
106 Ga0207687_10008943 3300025927 Bacteria 6547
107 Ga0207687_10391644 3300025927 Bacteria 1141
108 Ga0207700_10088886 3300025928 Bacteria 2434
109 Ga0207664_10003336 3300025929 Bacteria 10674
110 Ga0207644_10001888 3300025931 Bacteria 13632
111 Ga0207644_10087760 3300025931 Bacteria 2312
112 Ga0207706_10027661 3300025933 Bacteria 5070
113 Ga0207665_10265092 3300025939 Bacteria 1274
114 Ga0207712_10041418 3300025961 Bacteria 3166
115 Ga0207668_10037170 3300025972 Bacteria 3257
116 Ga0207668_10037744 3300025972 Bacteria 3236
117 Ga0207658_10055136 3300025986 Bacteria 2944
118 Ga0207648_10314106 3300026089 Bacteria 1407
119 Ga0207676_10466525 3300026095 Bacteria 1193
120 Ga0207675_100004077 3300026118 Bacteria 14141
121 Ga0207698_10658751 3300026142 Bacteria 1038
122 Ga0207698_11344608 3300026142 Bacteria 729
123 Ga0268266_10002963 3300028379 Bacteria 17509
124 Ga0268266_10288599 3300028379 Bacteria 1527
125 Ga0268264_10000195 3300028381 Bacteria 123899
126 Ga0268264_10020520 3300028381 Bacteria 5399
127 Ga0268264_10310935 3300028381 Bacteria 1487
128 Ga0268264_10968258 3300028381 Bacteria 856
129 Ga0307517_10133063 3300028786 Bacteria 1781
130 Ga0307513_10426201 3300031456 Bacteria 1055
131 Ga0307508_10186860 3300031616 Bacteria 1674
132 Ga0307516_10103827 3300031730 Bacteria 2655
133 Ga0307405_10245937 3300031731 Bacteria 1328
134 Ga0307413_10319810 3300031824 Bacteria 1185
135 Ga0307406_10000742 3300031901 Bacteria 18283
136 Ga0307406_10420842 3300031901 Bacteria 1064
137 Ga0307409_100007210 3300031995 Bacteria 6628
138 Ga0307409_100264422 3300031995 Bacteria 1581
139 Ga0307416_100071659 3300032002 Bacteria 2880
140 Ga0395899_0026051 3300037312 Bacteria 4413
141 Ga0395899_0036565 3300037312 Bacteria 3683
142 Ga0395899_0038465 3300037312 Bacteria 3583
143 Ga0395899_0059223 3300037312 Bacteria 2823
144 Ga0395899_0101942 3300037312 Bacteria 2071
145 Ga0395899_0465846 3300037312 Bacteria 825
146 Ga0395900_0026245 3300037418 Bacteria 5965
147 Ga0395900_0044089 3300037418 Bacteria 4597
148 Ga0395900_0049946 3300037418 Bacteria 4309
149 Ga0395900_0054708 3300037418 Bacteria 4109
150 Ga0395900_0057073 3300037418 Bacteria 4019
151 Ga0395900_0067655 3300037418 Bacteria 3670
152 Ga0395900_0110252 3300037418 Bacteria 2827
153 Ga0395900_0170196 3300037418 Bacteria 2218
154 Ga0395900_0720306 3300037418 Bacteria 930
155 Ga0395898_0007096 3300037466 Bacteria 11900
156 Ga0395898_0012288 3300037466 Bacteria 8856
157 Ga0395898_0020141 3300037466 Bacteria 6777
158 Ga0395898_0020764 3300037466 Bacteria 6667
159 Ga0395898_0028620 3300037466 Bacteria 5583
160 Ga0395898_0030997 3300037466 Bacteria 5347
161 Ga0395898_0046264 3300037466 Bacteria 4274
162 Ga0395898_0098854 3300037466 Bacteria 2802
163 Ga0395898_0261117 3300037466 Bacteria 1652
164 Ga0395905_0027566 3300037471 Bacteria 5356
165 Ga0395905_0029033 3300037471 Bacteria 5213
166 Ga0395905_0029736 3300037471 Bacteria 5149
167 Ga0395905_0055719 3300037471 Bacteria 3700
168 Ga0395905_0067566 3300037471 Bacteria 3348
169 Ga0395905_0080872 3300037471 Bacteria 3045
170 Ga0395905_0149191 3300037471 Bacteria 2200
171 Ga0395901_0005317 3300038443 Bacteria 13010
172 Ga0395901_0025026 3300038443 Bacteria 6127
173 Ga0395901_0027998 3300038443 Bacteria 5795
174 Ga0395901_0029785 3300038443 Bacteria 5622
175 Ga0395901_0032263 3300038443 Bacteria 5404
176 Ga0395901_0067652 3300038443 Bacteria 3720
177 Ga0395901_0069301 3300038443 Bacteria 3673
178 Ga0395901_0088155 3300038443 Bacteria 3245
179 Ga0395901_0513725 3300038443 Bacteria 1218
180 Ga0436365_1147075 3300039437 Bacteria 1680
181 Ga0439466_0051285 3300041411 Bacteria 1351
182 Ga0439465_0022039 3300041413 Bacteria 2001
183 Ga0451800_1007701 3300041459 Bacteria 1076
184 Ga0451800_1445353 3300041459 Bacteria 703
185 Ga0451843_0585870 3300041509 Bacteria 1312
186 Ga0439431_0101336 3300041997 Bacteria 792
187 Ga0439448_0061144 3300042005 Bacteria 1245
188 Ga0439446_0083903 3300042156 Bacteria 990
189 Ga0466966_0004639 3300044684 Bacteria 9051
190 Ga0466961_0054381 3300044693 Bacteria 2554
191 Ga0466957_0084823 3300044842 Bacteria 1977
192 Ga0466960_0174780 3300044901 Bacteria 1161
193 Ga0466959_0001239 3300045049 Bacteria 15428
194 Ga0466958_0168056 3300045836 Bacteria 1388
195 Ga0495603_0079050 3300046455 Bacteria 1928
196 Ga0495641_0035915 3300046461 Bacteria 2332
197 Ga0495605_0077053 3300046474 Bacteria 1565
198 Ga0495594_0041516 3300046499 Bacteria 2519
199 Ga0495594_0290623 3300046499 Bacteria 931
200 Ga0495630_0000060 3300046517 Bacteria 90021
201 Ga0495599_0373111 3300046678 Bacteria 853
202 Ga0495669_0009956 3300046684 Bacteria 4020
203 Ga0495686_0133424 3300047472 Bacteria 1471
204 Ga0496102_0022680 3300048905 Bacteria 5563
205 Ga0496104_0421633 3300048907 Bacteria 1246
206 Ga0496104_0464088 3300048907 Bacteria 1178
207 Ga0496106_0140367 3300048909 Bacteria 1900
208 Ga0496107_0130275 3300048910 Bacteria 1857
209 Ga0496108_0010772 3300048911 Bacteria 7422
210 Ga0496109_0001706 3300048912 Bacteria 18326
211 Ga0496109_0014665 3300048912 Bacteria 6820
212 Ga0496109_0281107 3300048912 Bacteria 1568
213 Ga0496110_0021624 3300048913 Bacteria 5451
214 Ga0496111_0015374 3300048914 Bacteria 5251
215 Ga0496112_0099519 3300048915 Bacteria 2877
216 Ga0496113_0119041 3300048916 Bacteria 2063
217 Ga0496114_0353008 3300048917 Bacteria 1301
218 Ga0501031_0006694 3300049568 Bacteria 7517
219 Ga0501032_0002938 3300049569 Bacteria 13258
220 Ga0501032_0011318 3300049569 Bacteria 6406
221 Ga0501033_0016050 3300049570 Bacteria 5671
222 Ga0501034_0025482 3300049571 Bacteria 6022
223 Ga0501034_0118405 3300049571 Bacteria 2635
224 Ga0501036_0001808 3300049572 Bacteria 16575
225 Ga0501036_0010154 3300049572 Bacteria 7759
226 Ga0501037_0018041 3300049573 Bacteria 5197
227 Ga0501038_0008044 3300049574 Bacteria 9710
228 Ga0501038_0048046 3300049574 Bacteria 3694
229 Ga0501039_0263216 3300049575 Bacteria 1355
230 Ga0501039_0414874 3300049575 Bacteria 1057
231 Ga0501041_0486995 3300049577 Bacteria 784
232 Ga0501042_0035054 3300049578 Bacteria 3560
233 Ga0501042_0081751 3300049578 Bacteria 2315
234 Ga0501042_0267100 3300049578 Bacteria 1235
235 Ga0501043_0026062 3300049579 Bacteria 4587
236 Ga0501046_0004544 3300049580 Bacteria 12573
237 Ga0501047_0003191 3300049581 Bacteria 15542
238 Ga0501047_0091962 3300049581 Bacteria 2912
239 Ga0501047_0106804 3300049581 Bacteria 2680
240 Ga0501048_0038359 3300049582 Bacteria 3437
241 Ga0501048_0039463 3300049582 Bacteria 3387
242 Ga0501067_0005552 3300049583 Bacteria 6992
243 Ga0501067_0009372 3300049583 Bacteria 5423
244 Ga0501068_0005697 3300049584 Bacteria 6823
245 Ga0501068_0035047 3300049584 Bacteria 2994
246 Ga0501069_0007009 3300049585 Bacteria 5899
247 Ga0501069_0143876 3300049585 Bacteria 1368
248 Ga0501070_0060515 3300049586 Bacteria 3138
249 Ga0501070_0451782 3300049586 Bacteria 1036
250 Ga0501071_0104072 3300049587 Bacteria 2095
251 Ga0501071_0738230 3300049587 Bacteria 758
252 Ga0501072_0059586 3300049588 Bacteria 3010
253 Ga0501072_0175754 3300049588 Bacteria 1708
254 Ga0501072_0414117 3300049588 Bacteria 1068
255 Ga0501073_0009049 3300049589 Bacteria 7351
256 Ga0501073_0009565 3300049589 Bacteria 7148
257 Ga0501074_0006994 3300049590 Bacteria 8150
258 Ga0501074_0028420 3300049590 Bacteria 4053
259 Ga0501074_0260377 3300049590 Bacteria 1233
260 Ga0501076_0118089 3300049592 Bacteria 2147
261 Ga0501076_0209521 3300049592 Bacteria 1592
262 Ga0501079_0241641 3300049741 Bacteria 1411
263 Ga0501079_0336656 3300049741 Bacteria 1182
264 Ga0501080_0137799 3300049742 Bacteria 2258
265 Ga0501081_0154869 3300049743 Bacteria 1648
266 Ga0501083_0050945 3300049744 Bacteria 2785
267 Ga0501035_0071784 3300049822 Bacteria 3064
268 Ga0501044_0298543 3300049823 Bacteria 1540
269 Ga0501045_0782457 3300049824 Bacteria 703
270 nmdc:mga03n38_303554_c1 3300050490 Bacteria 858
271 nmdc:mga00v17_10296_c1 3300050491 Bacteria 5099
272 nmdc:mga00v17_14240_c1 3300050491 Bacteria 4436
273 nmdc:mga00v17_83656_c1 3300050491 Bacteria 1996
274 nmdc:mga0yw44_106326_c1 3300050492 Bacteria 1793
275 nmdc:mga0yw44_117813_c1 3300050492 Bacteria 1708
276 nmdc:mga0yw44_429_c1 3300050492 Bacteria 14756
277 nmdc:mga0yw44_705592_c1 3300050492 Bacteria 685
278 nmdc:mga06z11_42685_c1 3300050494 Bacteria 2276
279 nmdc:mga05p37_480188_c1 3300050507 Bacteria 1432
280 nmdc:mga05p37_579103_c1 3300050507 Bacteria 1272
281 nmdc:mga05p37_851015_c1 3300050507 Bacteria 990
282 nmdc:mga09592_156320_c1 3300050508 Bacteria 1969
283 nmdc:mga09592_9924_c1 3300050508 Bacteria 7746
284 nmdc:mga0qj67_317794_c1 3300050509 Bacteria 1261
285 nmdc:mga06r32_237_c1 3300050510 Bacteria 45091
286 nmdc:mga06r32_242868_c1 3300050510 Bacteria 1788
287 nmdc:mga06r32_297408_c1 3300050510 Bacteria 1600
288 nmdc:mga06r32_950985_c1 3300050510 Bacteria 814
289 nmdc:mga08y16_424431_c1 3300050511 Bacteria 1359
290 nmdc:mga0n895_130639_c1 3300050512 Bacteria 2537
291 nmdc:mga0n895_241911_c1 3300050512 Bacteria 1832
292 nmdc:mga0rr50_4223_c1 3300050513 Bacteria 8401
293 nmdc:mga0rr50_55001_c1 3300050513 Bacteria 2968
294 nmdc:mga08x19_88893_c1 3300050514 Bacteria 2037
295 nmdc:mga0a205_10642_c1 3300050515 Bacteria 8455
296 nmdc:mga0a205_281565_c1 3300050515 Bacteria 1538
297 nmdc:mga0a205_695245_c1 3300050515 Bacteria 867
298 Ga0495655_0052188 3300053083 Bacteria 1087
299 Ga0501084_0070099 3300054114 Bacteria 2936
300 Ga0501082_0077321 3300060353 Bacteria 2869
301 Ga0501082_0368688 3300060353 Bacteria 1253
302 Ga0530510_0136026 3300061734 Bacteria 1809

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300041459 Ga0451800_1445353 Ga0451800_1445353_25_615 196
2 3300005617 Ga0068859_101055690 Ga0068859_1010556902 198
3 3300006931 Ga0097620_101055657 Ga0097620_1010556572 198
4 3300013297 Ga0157378_10405050 Ga0157378_104050501 199
5 3300006871 Ga0075434_100069684 Ga0075434_1000696841 200
6 3300050512 nmdc:mga0n895_241911_c1 nmdc:mga0n895_241911_c1_212_886 200
7 3300050513 nmdc:mga0rr50_4223_c1 nmdc:mga0rr50_4223_c1_7516_8190 200
8 3300050515 nmdc:mga0a205_695245_c1 nmdc:mga0a205_695245_c1_10_684 200
9 3300041411 Ga0439466_0051285 Ga0439466_0051285_410_1102 201
10 3300041413 Ga0439465_0022039 Ga0439465_0022039_1012_1704 201
11 3300041997 Ga0439431_0101336 Ga0439431_0101336_12_704 201
12 3300042156 Ga0439446_0083903 Ga0439446_0083903_229_921 201
13 3300048913 Ga0496110_0021624 Ga0496110_0021624_3118_3732 202
14 3300005456 Ga0070678_100569013 Ga0070678_1005690132 203
15 3300005618 Ga0068864_100482966 Ga0068864_1004829662 203
16 3300005842 Ga0068858_100189545 Ga0068858_1001895452 203
17 3300013308 Ga0157375_10589970 Ga0157375_105899702 203
18 3300014325 Ga0163163_10469695 Ga0163163_104696952 203
19 3300026095 Ga0207676_10466525 Ga0207676_104665252 203
20 3300037418 Ga0395900_0170196 Ga0395900_0170196_1270_1884 203
21 3300037466 Ga0395898_0020141 Ga0395898_0020141_5415_6029 203
22 3300038443 Ga0395901_0029785 Ga0395901_0029785_3902_4516 203
23 3300048907 Ga0496104_0421633 Ga0496104_0421633_463_1134 203
24 3300048911 Ga0496108_0010772 Ga0496108_0010772_1920_2591 203
25 3300048912 Ga0496109_0281107 Ga0496109_0281107_376_1047 203
26 3300050507 nmdc:mga05p37_480188_c1 nmdc:mga05p37_480188_c1_703_1320 203
27 3300050510 nmdc:mga06r32_242868_c1 nmdc:mga06r32_242868_c1_160_777 203
28 3300050512 nmdc:mga0n895_130639_c1 nmdc:mga0n895_130639_c1_1343_1960 203
29 3300050513 nmdc:mga0rr50_55001_c1 nmdc:mga0rr50_55001_c1_1028_1645 203
30 3300050514 nmdc:mga08x19_88893_c1 nmdc:mga08x19_88893_c1_1285_1902 203
31 3300050515 nmdc:mga0a205_10642_c1 nmdc:mga0a205_10642_c1_7542_8159 203
32 3300005840 Ga0068870_10157447 Ga0068870_101574472 204
33 3300020081 Ga0206354_11400587 Ga0206354_114005872 204
34 3300047472 Ga0495686_0133424 Ga0495686_0133424_721_1377 208
35 iso_pu_bacteria 2515154155 2515856330 208
36 iso_pu_bacteria 2728369276 2729908520 208
37 iso_pu_bacteria 2675903059 2676484206 209
38 iso_pu_bacteria 2739367653 2739603796 209
39 iso_pu_bacteria 2751185782 2753264206 209
40 iso_pu_bacteria 2808606306 2808629669 209
41 iso_pu_bacteria 2816332305 2817510082 209
42 iso_pu_bacteria 2857727296 2857727864 209
43 iso_pu_bacteria 3002998708 3003004941 209
44 3300005459 Ga0068867_100229473 Ga0068867_1002294733 210
45 3300009148 Ga0105243_10028149 Ga0105243_100281494 210
46 3300026089 Ga0207648_10314106 Ga0207648_103141061 210
47 3300049588 Ga0501072_0414117 Ga0501072_0414117_208_846 210
48 iso_pu_bacteria 2920879853 2920879943 210
49 iso_pu_bacteria 8002775197 8002780418 210
50 iso_pu_bacteria 8003856774 8003860790 210
51 3300005327 Ga0070658_10255876 Ga0070658_102558762 211
52 3300005337 Ga0070682_100901145 Ga0070682_1009011451 211
53 3300005548 Ga0070665_100262974 Ga0070665_1002629742 211
54 3300005840 Ga0068870_10210986 Ga0068870_102109862 211
55 3300005937 Ga0081455_10017368 Ga0081455_100173684 211
56 3300006358 Ga0068871_100344284 Ga0068871_1003442842 211
57 3300009094 Ga0111539_10097586 Ga0111539_100975862 211
58 3300009147 Ga0114129_10012016 Ga0114129_1001201610 211
59 3300009147 Ga0114129_10519414 Ga0114129_105194141 211
60 3300011119 Ga0105246_10219044 Ga0105246_102190441 211
61 3300025908 Ga0207643_10237843 Ga0207643_102378432 211
62 3300025909 Ga0207705_10247519 Ga0207705_102475192 211
63 3300026142 Ga0207698_10658751 Ga0207698_106587512 211
64 3300028379 Ga0268266_10288599 Ga0268266_102885992 211
65 3300031901 Ga0307406_10420842 Ga0307406_104208422 211
66 3300037312 Ga0395899_0465846 Ga0395899_0465846_106_747 211
67 3300037418 Ga0395900_0110252 Ga0395900_0110252_402_1043 211
68 3300037466 Ga0395898_0020764 Ga0395898_0020764_3823_4464 211
69 3300037471 Ga0395905_0029033 Ga0395905_0029033_1270_1911 211
70 3300037471 Ga0395905_0149191 Ga0395905_0149191_1218_1886 211
71 3300038443 Ga0395901_0067652 Ga0395901_0067652_626_1267 211
72 3300046684 Ga0495669_0009956 Ga0495669_0009956_1279_1929 211
73 3300050492 nmdc:mga0yw44_117813_c1 nmdc:mga0yw44_117813_c1_134_775 211
74 3300050507 nmdc:mga05p37_579103_c1 nmdc:mga05p37_579103_c1_99_746 211
75 3300050508 nmdc:mga09592_156320_c1 nmdc:mga09592_156320_c1_1056_1703 211
76 3300050509 nmdc:mga0qj67_317794_c1 nmdc:mga0qj67_317794_c1_348_995 211
77 3300050510 nmdc:mga06r32_950985_c1 nmdc:mga06r32_950985_c1_69_716 211
78 3300050511 nmdc:mga08y16_424431_c1 nmdc:mga08y16_424431_c1_147_794 211
79 3300005468 Ga0070707_100003803 Ga0070707_1000038039 212
80 3300005843 Ga0068860_100000237 Ga0068860_10000023754 212
81 3300006038 Ga0075365_10009153 Ga0075365_100091533 212
82 3300006038 Ga0075365_10014193 Ga0075365_100141932 212
83 3300006038 Ga0075365_10052332 Ga0075365_100523323 212
84 3300006038 Ga0075365_10697846 Ga0075365_106978461 212
85 3300006042 Ga0075368_10134974 Ga0075368_101349742 212
86 3300006048 Ga0075363_100372039 Ga0075363_1003720392 212
87 3300006178 Ga0075367_10034935 Ga0075367_100349354 212
88 3300006844 Ga0075428_100651744 Ga0075428_1006517442 212
89 3300025922 Ga0207646_10000034 Ga0207646_1000003465 212
90 3300025986 Ga0207658_10055136 Ga0207658_100551362 212
91 3300028381 Ga0268264_10000195 Ga0268264_1000019514 212
92 3300041509 Ga0451843_0585870 Ga0451843_0585870_231_872 212
93 3300049571 Ga0501034_0025482 Ga0501034_0025482_2689_3327 212
94 3300049572 Ga0501036_0001808 Ga0501036_0001808_2898_3536 212
95 3300049573 Ga0501037_0018041 Ga0501037_0018041_1060_1698 212
96 3300049574 Ga0501038_0008044 Ga0501038_0008044_7202_7840 212
97 3300049575 Ga0501039_0263216 Ga0501039_0263216_521_1159 212
98 3300049577 Ga0501041_0486995 Ga0501041_0486995_124_762 212
99 3300049578 Ga0501042_0035054 Ga0501042_0035054_2125_2763 212
100 3300049578 Ga0501042_0267100 Ga0501042_0267100_438_1079 212
101 3300049581 Ga0501047_0003191 Ga0501047_0003191_4848_5486 212
102 3300049582 Ga0501048_0038359 Ga0501048_0038359_335_973 212
103 3300049588 Ga0501072_0175754 Ga0501072_0175754_30_671 212
104 3300049589 Ga0501073_0009049 Ga0501073_0009049_2943_3581 212
105 3300049590 Ga0501074_0006994 Ga0501074_0006994_5386_6024 212
106 3300049592 Ga0501076_0118089 Ga0501076_0118089_691_1332 212
107 3300049743 Ga0501081_0154869 Ga0501081_0154869_931_1572 212
108 3300049823 Ga0501044_0298543 Ga0501044_0298543_862_1500 212
109 3300049824 Ga0501045_0782457 Ga0501045_0782457_13_654 212
110 3300050490 nmdc:mga03n38_303554_c1 nmdc:mga03n38_303554_c1_96_737 212
111 3300050491 nmdc:mga00v17_14240_c1 nmdc:mga00v17_14240_c1_2146_2787 212
112 3300050491 nmdc:mga00v17_83656_c1 nmdc:mga00v17_83656_c1_1327_1968 212
113 3300050492 nmdc:mga0yw44_429_c1 nmdc:mga0yw44_429_c1_10865_11506 212
114 3300050492 nmdc:mga0yw44_705592_c1 nmdc:mga0yw44_705592_c1_16_654 212
115 3300050494 nmdc:mga06z11_42685_c1 nmdc:mga06z11_42685_c1_992_1633 212
116 3300060353 Ga0501082_0368688 Ga0501082_0368688_306_947 212
117 3300005328 Ga0070676_10047747 Ga0070676_100477475 213
118 3300005329 Ga0070683_100591318 Ga0070683_1005913182 213
119 3300005347 Ga0070668_100048975 Ga0070668_1000489755 213
120 3300005347 Ga0070668_100066291 Ga0070668_1000662912 213
121 3300005355 Ga0070671_100000665 Ga0070671_1000006657 213
122 3300005437 Ga0070710_10126009 Ga0070710_101260092 213
123 3300005456 Ga0070678_100092369 Ga0070678_1000923693 213
124 3300005471 Ga0070698_100155970 Ga0070698_1001559704 213
125 3300005546 Ga0070696_100074458 Ga0070696_1000744582 213
126 3300005548 Ga0070665_100003868 Ga0070665_10000386814 213
127 3300005578 Ga0068854_100060421 Ga0068854_1000604215 213
128 3300005615 Ga0070702_100131819 Ga0070702_1001318192 213
129 3300005618 Ga0068864_100443958 Ga0068864_1004439582 213
130 3300005719 Ga0068861_100059244 Ga0068861_1000592442 213
131 3300005843 Ga0068860_100011645 Ga0068860_1000116452 213
132 3300005844 Ga0068862_100230771 Ga0068862_1002307712 213
133 3300005937 Ga0081455_10013909 Ga0081455_100139093 213
134 3300005937 Ga0081455_10139147 Ga0081455_101391473 213
135 3300006028 Ga0070717_10235187 Ga0070717_102351871 213
136 3300006852 Ga0075433_10165249 Ga0075433_101652491 213
137 3300009098 Ga0105245_10064073 Ga0105245_100640731 213
138 3300009553 Ga0105249_10002109 Ga0105249_100021094 213
139 3300009553 Ga0105249_10415302 Ga0105249_104153022 213
140 3300010375 Ga0105239_10057799 Ga0105239_100577992 213
141 3300013306 Ga0163162_10036750 Ga0163162_100367505 213
142 3300013307 Ga0157372_10396194 Ga0157372_103961942 213
143 3300014969 Ga0157376_10480817 Ga0157376_104808172 213
144 3300025907 Ga0207645_10058197 Ga0207645_100581975 213
145 3300025915 Ga0207693_10060328 Ga0207693_100603282 213
146 3300025927 Ga0207687_10008943 Ga0207687_100089436 213
147 3300025927 Ga0207687_10391644 Ga0207687_103916443 213
148 3300025931 Ga0207644_10001888 Ga0207644_100018889 213
149 3300025933 Ga0207706_10027661 Ga0207706_100276615 213
150 3300025939 Ga0207665_10265092 Ga0207665_102650922 213
151 3300025961 Ga0207712_10041418 Ga0207712_100414185 213
152 3300025972 Ga0207668_10037170 Ga0207668_100371702 213
153 3300025972 Ga0207668_10037744 Ga0207668_100377445 213
154 3300026118 Ga0207675_100004077 Ga0207675_1000040779 213
155 3300026142 Ga0207698_11344608 Ga0207698_113446081 213
156 3300028379 Ga0268266_10002963 Ga0268266_100029638 213
157 3300028381 Ga0268264_10020520 Ga0268264_100205202 213
158 3300031995 Ga0307409_100264422 Ga0307409_1002644222 213
159 3300039437 Ga0436365_1147075 Ga0436365_1147075_328_987 213
160 3300044842 Ga0466957_0084823 Ga0466957_0084823_750_1391 213
161 3300046455 Ga0495603_0079050 Ga0495603_0079050_1242_1901 213
162 3300046474 Ga0495605_0077053 Ga0495605_0077053_384_1043 213
163 3300046499 Ga0495594_0041516 Ga0495594_0041516_676_1317 213
164 3300046499 Ga0495594_0290623 Ga0495594_0290623_217_858 213
165 3300046678 Ga0495599_0373111 Ga0495599_0373111_73_714 213
166 3300049592 Ga0501076_0209521 Ga0501076_0209521_83_859 213
167 3300049742 Ga0501080_0137799 Ga0501080_0137799_1151_1873 213
168 3300050515 nmdc:mga0a205_281565_c1 nmdc:mga0a205_281565_c1_157_891 213
169 3300005327 Ga0070658_10088168 Ga0070658_100881682 214
170 3300005329 Ga0070683_100782712 Ga0070683_1007827122 214
171 3300005344 Ga0070661_100156556 Ga0070661_1001565563 214
172 3300005355 Ga0070671_100089488 Ga0070671_1000894882 214
173 3300005366 Ga0070659_100074595 Ga0070659_1000745953 214
174 3300005366 Ga0070659_100150244 Ga0070659_1001502442 214
175 3300005435 Ga0070714_100008377 Ga0070714_1000083775 214
176 3300005435 Ga0070714_100163504 Ga0070714_1001635042 214
177 3300005436 Ga0070713_100082065 Ga0070713_1000820652 214
178 3300005458 Ga0070681_10318754 Ga0070681_103187541 214
179 3300005467 Ga0070706_100141603 Ga0070706_1001416032 214
180 3300005468 Ga0070707_100391780 Ga0070707_1003917802 214
181 3300005471 Ga0070698_100366549 Ga0070698_1003665492 214
182 3300005471 Ga0070698_100695696 Ga0070698_1006956962 214
183 3300005548 Ga0070665_100196204 Ga0070665_1001962042 214
184 3300005577 Ga0068857_100236227 Ga0068857_1002362272 214
185 3300005843 Ga0068860_100433055 Ga0068860_1004330551 214
186 3300005983 Ga0081540_1000551 Ga0081540_10005519 214
187 3300006038 Ga0075365_10027652 Ga0075365_100276524 214
188 3300006038 Ga0075365_10438717 Ga0075365_104387172 214
189 3300006038 Ga0075365_10759141 Ga0075365_107591411 214
190 3300006051 Ga0075364_10091541 Ga0075364_100915412 214
191 3300006844 Ga0075428_100536250 Ga0075428_1005362502 214
192 3300006846 Ga0075430_100002542 Ga0075430_1000025424 214
193 3300006846 Ga0075430_100362133 Ga0075430_1003621332 214
194 3300006847 Ga0075431_100000104 Ga0075431_10000010421 214
195 3300006852 Ga0075433_10031329 Ga0075433_100313292 214
196 3300006871 Ga0075434_100094823 Ga0075434_1000948232 214
197 3300006880 Ga0075429_100000172 Ga0075429_10000017238 214
198 3300006880 Ga0075429_100058903 Ga0075429_1000589038 214
199 3300006914 Ga0075436_100002205 Ga0075436_10000220510 214
200 3300006914 Ga0075436_100014670 Ga0075436_1000146703 214
201 3300007076 Ga0075435_100034477 Ga0075435_1000344772 214
202 3300009101 Ga0105247_10179522 Ga0105247_101795222 214
203 3300013297 Ga0157378_10004374 Ga0157378_1000437411 214
204 3300013307 Ga0157372_11229913 Ga0157372_112299132 214
205 3300014968 Ga0157379_10314976 Ga0157379_103149762 214
206 3300014968 Ga0157379_10393809 Ga0157379_103938091 214
207 3300025909 Ga0207705_10055324 Ga0207705_100553242 214
208 3300025912 Ga0207707_10330694 Ga0207707_103306942 214
209 3300025928 Ga0207700_10088886 Ga0207700_100888862 214
210 3300025929 Ga0207664_10003336 Ga0207664_100033364 214
211 3300025931 Ga0207644_10087760 Ga0207644_100877603 214
212 3300028381 Ga0268264_10310935 Ga0268264_103109352 214
213 3300028381 Ga0268264_10968258 Ga0268264_109682581 214
214 3300028786 Ga0307517_10133063 Ga0307517_101330632 214
215 3300031456 Ga0307513_10426201 Ga0307513_104262011 214
216 3300031616 Ga0307508_10186860 Ga0307508_101868602 214
217 3300031730 Ga0307516_10103827 Ga0307516_101038272 214
218 3300031731 Ga0307405_10245937 Ga0307405_102459371 214
219 3300031824 Ga0307413_10319810 Ga0307413_103198101 214
220 3300031901 Ga0307406_10000742 Ga0307406_1000074211 214
221 3300031901 Ga0307406_10000742 Ga0307406_100007425 214
222 3300031995 Ga0307409_100007210 Ga0307409_1000072106 214
223 3300032002 Ga0307416_100071659 Ga0307416_1000716593 214
224 3300037312 Ga0395899_0026051 Ga0395899_0026051_834_1490 214
225 3300037312 Ga0395899_0036565 Ga0395899_0036565_624_1271 214
226 3300037312 Ga0395899_0038465 Ga0395899_0038465_409_1059 214
227 3300037312 Ga0395899_0059223 Ga0395899_0059223_840_1487 214
228 3300037312 Ga0395899_0101942 Ga0395899_0101942_228_872 214
229 3300037418 Ga0395900_0026245 Ga0395900_0026245_310_954 214
230 3300037418 Ga0395900_0044089 Ga0395900_0044089_3326_3973 214
231 3300037418 Ga0395900_0049946 Ga0395900_0049946_226_873 214
232 3300037418 Ga0395900_0054708 Ga0395900_0054708_2223_2873 214
233 3300037418 Ga0395900_0057073 Ga0395900_0057073_1786_2442 214
234 3300037418 Ga0395900_0067655 Ga0395900_0067655_2145_2795 214
235 3300037418 Ga0395900_0720306 Ga0395900_0720306_122_769 214
236 3300037466 Ga0395898_0007096 Ga0395898_0007096_9139_9786 214
237 3300037466 Ga0395898_0012288 Ga0395898_0012288_530_1180 214
238 3300037466 Ga0395898_0028620 Ga0395898_0028620_2504_3154 214
239 3300037466 Ga0395898_0030997 Ga0395898_0030997_4251_4898 214
240 3300037466 Ga0395898_0046264 Ga0395898_0046264_2316_2972 214
241 3300037466 Ga0395898_0098854 Ga0395898_0098854_230_874 214
242 3300037466 Ga0395898_0261117 Ga0395898_0261117_662_1315 214
243 3300037471 Ga0395905_0027566 Ga0395905_0027566_2315_2965 214
244 3300037471 Ga0395905_0029736 Ga0395905_0029736_392_1036 214
245 3300037471 Ga0395905_0055719 Ga0395905_0055719_2114_2761 214
246 3300037471 Ga0395905_0067566 Ga0395905_0067566_806_1453 214
247 3300037471 Ga0395905_0080872 Ga0395905_0080872_2001_2657 214
248 3300038443 Ga0395901_0005317 Ga0395901_0005317_5158_5805 214
249 3300038443 Ga0395901_0025026 Ga0395901_0025026_2954_3601 214
250 3300038443 Ga0395901_0027998 Ga0395901_0027998_2397_3047 214
251 3300038443 Ga0395901_0032263 Ga0395901_0032263_224_868 214
252 3300038443 Ga0395901_0069301 Ga0395901_0069301_1210_1866 214
253 3300038443 Ga0395901_0088155 Ga0395901_0088155_1120_1770 214
254 3300038443 Ga0395901_0513725 Ga0395901_0513725_278_925 214
255 3300041459 Ga0451800_1007701 Ga0451800_1007701_36_683 214
256 3300042005 Ga0439448_0061144 Ga0439448_0061144_108_752 214
257 3300044684 Ga0466966_0004639 Ga0466966_0004639_1100_1750 214
258 3300044693 Ga0466961_0054381 Ga0466961_0054381_935_1585 214
259 3300044901 Ga0466960_0174780 Ga0466960_0174780_160_810 214
260 3300045049 Ga0466959_0001239 Ga0466959_0001239_7503_8153 214
261 3300045836 Ga0466958_0168056 Ga0466958_0168056_664_1314 214
262 3300046461 Ga0495641_0035915 Ga0495641_0035915_427_1077 214
263 3300046517 Ga0495630_0000060 Ga0495630_0000060_36725_37375 214
264 3300048905 Ga0496102_0022680 Ga0496102_0022680_4001_4651 214
265 3300048907 Ga0496104_0464088 Ga0496104_0464088_17_667 214
266 3300048909 Ga0496106_0140367 Ga0496106_0140367_659_1309 214
267 3300048910 Ga0496107_0130275 Ga0496107_0130275_276_926 214
268 3300048912 Ga0496109_0001706 Ga0496109_0001706_3872_4528 214
269 3300048912 Ga0496109_0014665 Ga0496109_0014665_1768_2418 214
270 3300048914 Ga0496111_0015374 Ga0496111_0015374_3220_3870 214
271 3300048915 Ga0496112_0099519 Ga0496112_0099519_1989_2645 214
272 3300048916 Ga0496113_0119041 Ga0496113_0119041_679_1329 214
273 3300048917 Ga0496114_0353008 Ga0496114_0353008_249_896 214
274 3300049568 Ga0501031_0006694 Ga0501031_0006694_1591_2247 214
275 3300049569 Ga0501032_0002938 Ga0501032_0002938_3208_3873 214
276 3300049569 Ga0501032_0011318 Ga0501032_0011318_270_926 214
277 3300049570 Ga0501033_0016050 Ga0501033_0016050_4512_5168 214
278 3300049571 Ga0501034_0118405 Ga0501034_0118405_1603_2259 214
279 3300049572 Ga0501036_0010154 Ga0501036_0010154_3911_4567 214
280 3300049574 Ga0501038_0048046 Ga0501038_0048046_2662_3318 214
281 3300049575 Ga0501039_0414874 Ga0501039_0414874_379_1035 214
282 3300049578 Ga0501042_0081751 Ga0501042_0081751_954_1610 214
283 3300049579 Ga0501043_0026062 Ga0501043_0026062_1501_2157 214
284 3300049580 Ga0501046_0004544 Ga0501046_0004544_2191_2847 214
285 3300049581 Ga0501047_0091962 Ga0501047_0091962_1753_2403 214
286 3300049581 Ga0501047_0106804 Ga0501047_0106804_122_778 214
287 3300049582 Ga0501048_0039463 Ga0501048_0039463_458_1114 214
288 3300049583 Ga0501067_0005552 Ga0501067_0005552_4060_4716 214
289 3300049583 Ga0501067_0009372 Ga0501067_0009372_2609_3253 214
290 3300049584 Ga0501068_0005697 Ga0501068_0005697_2365_3021 214
291 3300049584 Ga0501068_0035047 Ga0501068_0035047_297_941 214
292 3300049585 Ga0501069_0007009 Ga0501069_0007009_3617_4273 214
293 3300049585 Ga0501069_0143876 Ga0501069_0143876_682_1326 214
294 3300049586 Ga0501070_0060515 Ga0501070_0060515_1025_1681 214
295 3300049586 Ga0501070_0451782 Ga0501070_0451782_307_951 214
296 3300049587 Ga0501071_0104072 Ga0501071_0104072_875_1531 214
297 3300049587 Ga0501071_0738230 Ga0501071_0738230_56_715 214
298 3300049588 Ga0501072_0059586 Ga0501072_0059586_391_1047 214
299 3300049589 Ga0501073_0009565 Ga0501073_0009565_2406_3062 214
300 3300049590 Ga0501074_0028420 Ga0501074_0028420_2700_3356 214
301 3300049590 Ga0501074_0260377 Ga0501074_0260377_451_1095 214
302 3300049741 Ga0501079_0241641 Ga0501079_0241641_58_714 214
303 3300049741 Ga0501079_0336656 Ga0501079_0336656_120_764 214
304 3300049744 Ga0501083_0050945 Ga0501083_0050945_1105_1761 214
305 3300049822 Ga0501035_0071784 Ga0501035_0071784_645_1301 214
306 3300050491 nmdc:mga00v17_10296_c1 nmdc:mga00v17_10296_c1_3369_4019 214
307 3300050492 nmdc:mga0yw44_106326_c1 nmdc:mga0yw44_106326_c1_787_1437 214
308 3300050507 nmdc:mga05p37_851015_c1 nmdc:mga05p37_851015_c1_310_963 214
309 3300050508 nmdc:mga09592_9924_c1 nmdc:mga09592_9924_c1_1827_2477 214
310 3300050510 nmdc:mga06r32_237_c1 nmdc:mga06r32_237_c1_34567_35217 214
311 3300050510 nmdc:mga06r32_297408_c1 nmdc:mga06r32_297408_c1_555_1217 214
312 3300053083 Ga0495655_0052188 Ga0495655_0052188_144_806 214
313 3300054114 Ga0501084_0070099 Ga0501084_0070099_703_1359 214
314 3300060353 Ga0501082_0077321 Ga0501082_0077321_586_1242 214
315 3300061734 Ga0530510_0136026 Ga0530510_0136026_689_1333 214

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00196

GerE

Bacterial regulatory proteins, luxR family

192

244

0.95

PF00072

Response_reg

Response regulator receiver domain

47

163

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7x1k-assembly1.cif.gz_B crystal structure of the flagellar expression regulator degu from listeria monocytogenes 0.9563 148 213
7ve5-assembly1.cif.gz_B c-terminal domain of vrar 0.9558 147 213
1zlj-assembly2.cif.gz_C crystal structure of the mycobacterium tuberculosis hypoxic response regulator dosr c-terminal domain 0.9498 151 213
4qic-assembly1.cif.gz_C co-crystal structure of anti-anti-sigma factor phyr complexed with anti-sigma factor nepr from bartonella quintana 0.9308 2 81
6v7w-assembly1.cif.gz_B crystal structure of lasr-aqs1 complex from pseudomonas aeruginosa 0.9293 151 213
ID Description Score Start End Superfamily
af_P52106_149_214_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9559 151 213 1.10.10.10
4if4B02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9526 147 213 1.10.10.10
af_P06993_830_894_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9524 151 213 1.10.10.10
4if4D02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9492 146 213 1.10.10.10
4if4C02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9473 146 213 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A538JGH7-F1-model_v4 Response regulator 0.9958 2 134 GO:0000160
GO:0004016
GO:0009190
AF-A0A538J270-F1-model_v4 Response regulator 0.9937 1 143 GO:0000160
GO:0004016
GO:0009190
AF-A0A3N0DSD5-F1-model_v4 Response regulator 0.9932 2 139 GO:0000160
GO:0004016
GO:0009190
AF-A0A7Y5X430-F1-model_v4 Response regulator 0.9861 1 140 GO:0000160
GO:0004016
GO:0009190
AF-A9WTE0-F1-model_v4 Two-component response regulator 0.9856 1 89 GO:0000160

Feature Viewer

pLDDT pTM Quality
90.83 0.65 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map