F403337

General Info

Members Datasets Scaffolds Average Seq Length
315 175 631 376

Family's Representative Sequence

Representative Sequence 3300046616|Ga0495668_0049837|Ga0495668_0049837_107_1402
Length 431
Sequence LKKPFASCRAKTITGANNKKRKAGIFILRYLGEDEHPEGTAKCLLKIVTSRKSHYMKCSLFFYLLLTIVLTYSGTTAFAKEDHPTLAIGAPAPDFSLPGTDGKTYSLASFKKANLLVVIFTCNHCPTAQAYEDRIIQLTKEYTPKGVAVVAIMPNDPTSVRLDELGYTDMNDSFAEMQLRAKQKKYNFPYLYDGKTQRTSKAYGCAATPHVFIFDKARLLRYQGRIDDVEKPTKTPTQFDTRNALNALLQNNPVPVATTKVFGCSIKWAEKTDLVKKGFEEWAKEPVTVNLVDEAGLKDLLKNSSDKLRLINIWATWCGPCVTEFPAFITMNRMYRRRDFEFISISADEPAKKEKVLKFLQSQQASNTNYLFSVDDKYKLIEAIDPQWQGALPYTILVEPGGKIVYSKQGPIDAAAMKKLIVDHPLIGRYY

Samples

Sample ID Description Type Environment
1 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
75 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
76 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
121 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
122 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
123 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
124 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
125 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
126 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
127 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
128 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
129 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
130 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
131 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
132 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
133 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
134 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
135 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
136 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
137 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
138 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
139 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
140 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
141 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
142 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
145 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
149 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
156 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
157 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
158 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
159 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
160 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
161 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
162 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
163 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
167 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
168 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
169 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
170 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
171 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
172 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
173 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
174 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
175 2738541278 Niastella sp. CF465 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.68
Metatranscriptomes 0
Isolates 0.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.59
Nodule 0
Rhizoplane 1.9
Rhizosphere 93.33
Stem 0
Stem Tuber 0
Unclassified 14.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495668_0049837 3300046616 Bacteria 2322
2 rootH1_10134284 3300003316 Bacteria 1996
3 rootL2_10247718 3300003322 Bacteria 8098
4 rootH1_10015492 3300003323 Bacteria 90717
5 rootH1_10027285 3300003323 Bacteria 5077
6 rootH1_10033678 3300003316 Bacteria 2198
7 rootH1_10033678 3300003323 Bacteria 13642
8 Ga0070676_10039355 3300005328 Unclassified 2734
9 Ga0070683_100000490 3300005329 Bacteria 27911
10 Ga0070683_100019095 3300005329 Bacteria 6082
11 Ga0070683_100154983 3300005329 Bacteria 2172
12 Ga0070690_100031097 3300005330 Bacteria 3323
13 Ga0070690_100034634 3300005330 Bacteria 3165
14 Ga0070670_100030472 3300005331 Unclassified 4646
15 Ga0070670_100036659 3300005331 Bacteria 4220
16 Ga0070670_100125007 3300005331 Bacteria 2220
17 Ga0070670_100143418 3300005331 Bacteria 2066
18 Ga0068869_100011482 3300005334 Bacteria 5810
19 Ga0068869_100019044 3300005334 Bacteria 4683
20 Ga0068869_100157756 3300005334 Bacteria 1764
21 Ga0070666_10015993 3300005335 Bacteria 4793
22 Ga0070666_10063113 3300005335 Bacteria 2511
23 Ga0070666_10106581 3300005335 Bacteria 1936
24 Ga0068868_100027816 3300005338 Bacteria 4316
25 Ga0068868_100028944 3300005338 Bacteria 4240
26 Ga0068868_100138148 3300005338 Bacteria 1999
27 Ga0068868_100163201 3300005338 Unclassified 1841
28 Ga0068868_100214523 3300005338 Unclassified 1610
29 Ga0068868_100331880 3300005338 Unclassified 1298
30 Ga0070689_100011947 3300005340 Bacteria 6237
31 Ga0070689_100015502 3300005340 Bacteria 5560
32 Ga0070661_100017563 3300005344 Bacteria 5078
33 Ga0070661_100022108 3300005344 Bacteria 4549
34 Ga0070668_100001245 3300005347 Bacteria 18166
35 Ga0070668_100045286 3300005347 Unclassified 3376
36 Ga0070669_100090716 3300005353 Unclassified 2291
37 Ga0070669_100153997 3300005353 Bacteria 1781
38 Ga0070675_100075385 3300005354 Bacteria 2804
39 Ga0070675_100281212 3300005354 Bacteria 1462
40 Ga0070671_100014400 3300005355 Bacteria 6389
41 Ga0070671_100020452 3300005355 Bacteria 5398
42 Ga0070671_100241184 3300005355 Bacteria 1534
43 Ga0070674_100009306 3300005356 Bacteria 5881
44 Ga0070673_100004556 3300005364 Bacteria 8780
45 Ga0070673_100012571 3300005364 Bacteria 5815
46 Ga0070688_100085302 3300005365 Bacteria 2052
47 Ga0070659_100037249 3300005366 Bacteria 3791
48 Ga0070667_100008720 3300005367 Bacteria 8406
49 Ga0070667_100036094 3300005367 Bacteria 4144
50 Ga0070667_100037625 3300005367 Bacteria 4057
51 Ga0070678_100052338 3300005456 Bacteria 2964
52 Ga0070662_100017691 3300005457 Bacteria 4809
53 Ga0070662_100041584 3300005457 Bacteria 3279
54 Ga0070662_100050141 3300005457 Bacteria 3011
55 Ga0070662_100182620 3300005457 Bacteria 1655
56 Ga0068867_100074952 3300005459 Unclassified 2537
57 Ga0068867_100112907 3300005459 Bacteria 2090
58 Ga0070679_100019636 3300005530 Bacteria 6575
59 Ga0070679_100096558 3300005530 Unclassified 2943
60 Ga0070684_100042072 3300005535 Bacteria 3943
61 Ga0070684_100061038 3300005535 Bacteria 3299
62 Ga0070684_100114603 3300005535 Bacteria 2420
63 Ga0068853_100003840 3300005539 Bacteria 11512
64 Ga0068853_100026077 3300005539 Bacteria 4906
65 Ga0070672_100010315 3300005543 Bacteria 6476
66 Ga0070672_100144350 3300005543 Bacteria 1966
67 Ga0070693_100044034 3300005547 Unclassified 2523
68 Ga0068855_100088712 3300005563 Bacteria 3572
69 Ga0070664_100000887 3300005564 Bacteria 23244
70 Ga0070664_100034641 3300005564 Bacteria 4235
71 Ga0068857_100001871 3300005577 Bacteria 16937
72 Ga0068857_100059655 3300005577 Bacteria 3389
73 Ga0068857_100066273 3300005577 Bacteria 3213
74 Ga0068857_100216887 3300005577 Bacteria 1747
75 Ga0068854_100032981 3300005578 Bacteria 3607
76 Ga0068854_100362339 3300005578 Unclassified 1190
77 Ga0068856_100054523 3300005614 Bacteria 3943
78 Ga0068856_100084717 3300005614 Unclassified 3149
79 Ga0070702_100016877 3300005615 Unclassified 3757
80 Ga0068852_100067494 3300005616 Bacteria 3127
81 Ga0068859_100226520 3300005617 Bacteria 1957
82 Ga0068864_100001608 3300005618 Bacteria 18629
83 Ga0068864_100049719 3300005618 Bacteria 3608
84 Ga0068866_10019328 3300005718 Bacteria 3099
85 Ga0068870_10013369 3300005840 Bacteria 3857
86 Ga0068863_100180111 3300005841 Bacteria 2029
87 Ga0068863_100186375 3300005841 Bacteria 1993
88 Ga0068858_100356494 3300005842 Bacteria 1401
89 Ga0068860_100009006 3300005843 Bacteria 9938
90 Ga0068862_100020948 3300005844 Bacteria 5464
91 Ga0068862_100198318 3300005844 Bacteria 1809
92 Ga0068862_100399191 3300005844 Bacteria 1286
93 Ga0070715_10096076 3300006163 Unclassified 1373
94 Ga0097621_100001005 3300006237 Bacteria 19842
95 Ga0097621_100044315 3300006237 Bacteria 3589
96 Ga0097621_100088849 3300006237 Bacteria 2583
97 Ga0097621_100166381 3300006237 Bacteria 1898
98 Ga0097621_100171357 3300006237 Unclassified 1871
99 Ga0068871_100000069 3300006358 Bacteria 57310
100 Ga0068871_100009145 3300006358 Bacteria 7160
101 Ga0068871_100058500 3300006358 Bacteria 3138
102 Ga0068871_100107192 3300006358 Unclassified 2346
103 Ga0068871_100208525 3300006358 Bacteria 1689
104 Ga0075431_100012700 3300006847 Bacteria 8506
105 Ga0075434_100031919 3300006871 Bacteria 5193
106 Ga0075429_100016901 3300006880 Bacteria 6313
107 Ga0068865_100041381 3300006881 Unclassified 3135
108 Ga0068865_100109035 3300006881 Bacteria 2039
109 Ga0068865_100115638 3300006881 Bacteria 1986
110 Ga0097620_100226514 3300006931 Bacteria 1957
111 Ga0111539_10010793 3300009094 Bacteria 11502
112 Ga0105247_10009396 3300009101 Bacteria 5934
113 Ga0114129_10000714 3300009147 Bacteria 42000
114 Ga0105241_10065397 3300009174 Unclassified 2810
115 Ga0105241_10067230 3300009174 Bacteria 2773
116 Ga0105242_10033950 3300009176 Bacteria 4089
117 Ga0105242_10118294 3300009176 Bacteria 2269
118 Ga0105248_10029265 3300009177 Bacteria 6144
119 Ga0105237_10134025 3300009545 Unclassified 2472
120 Ga0105249_10004771 3300009553 Bacteria 11696
121 Ga0105249_10068791 3300009553 Unclassified 3266
122 Ga0105249_10165232 3300009553 Bacteria 2142
123 Ga0105239_10066827 3300010375 Bacteria 3949
124 Ga0157373_10005462 3300013100 Bacteria 9540
125 Ga0157371_10036861 3300013102 Bacteria 3502
126 Ga0157370_10052408 3300013104 Bacteria 3896
127 Ga0157369_10390626 3300013105 Bacteria 1444
128 Ga0157374_10059702 3300013296 Bacteria 3567
129 Ga0157374_10138792 3300013296 Unclassified 2358
130 Ga0157374_10181540 3300013296 Bacteria 2056
131 Ga0157374_10185151 3300013296 Bacteria 2036
132 Ga0157378_10008357 3300013297 Bacteria 9016
133 Ga0157378_10046263 3300013297 Bacteria 3868
134 Ga0157378_10091212 3300013297 Bacteria 2770
135 Ga0157378_10142527 3300013297 Bacteria 2227
136 Ga0157378_10246501 3300013297 Bacteria 1709
137 Ga0163162_10000195 3300013306 Bacteria 55910
138 Ga0163162_10000957 3300013306 Bacteria 26801
139 Ga0163162_10002155 3300013306 Bacteria 18467
140 Ga0163162_10005732 3300013306 Bacteria 12011
141 Ga0163162_10044495 3300013306 Bacteria 4447
142 Ga0163162_10073070 3300013306 Bacteria 3485
143 Ga0163162_10244345 3300013306 Bacteria 1926
144 Ga0157375_10000646 3300013308 Bacteria 30874
145 Ga0157375_10085326 3300013308 Bacteria 3207
146 Ga0157375_10166030 3300013308 Bacteria 2352
147 Ga0157375_10207680 3300013308 Unclassified 2115
148 Ga0163163_10000218 3300014325 Bacteria 59659
149 Ga0163163_10000508 3300014325 Bacteria 34914
150 Ga0157380_10002431 3300014326 Bacteria 12551
151 Ga0157379_10031547 3300014968 Bacteria 4722
152 Ga0157379_10078406 3300014968 Bacteria 2958
153 Ga0157376_10014637 3300014969 Bacteria 5895
154 Ga0157376_10138367 3300014969 Bacteria 2181
155 Ga0157376_10309417 3300014969 Bacteria 1498
156 Ga0163161_10004735 3300017792 Bacteria 9464
157 Ga0163161_10006960 3300017792 Bacteria 7818
158 Ga0163161_10171955 3300017792 Bacteria 1657
159 Ga0207697_10032152 3300025315 Bacteria 2147
160 Ga0207688_10005690 3300025901 Bacteria 6776
161 Ga0207680_10023101 3300025903 Unclassified 3391
162 Ga0207680_10046842 3300025903 Unclassified 2558
163 Ga0207680_10091265 3300025903 Bacteria 1938
164 Ga0207647_10040591 3300025904 Bacteria 2930
165 Ga0207645_10000898 3300025907 Bacteria 24683
166 Ga0207645_10012738 3300025907 Bacteria 5700
167 Ga0207643_10010521 3300025908 Bacteria 4981
168 Ga0207705_10276706 3300025909 Bacteria 1284
169 Ga0207695_10049267 3300025913 Unclassified 4443
170 Ga0207671_10056229 3300025914 Unclassified 2915
171 Ga0207657_10025950 3300025919 Bacteria 5394
172 Ga0207652_10036335 3300025921 Bacteria 4165
173 Ga0207681_10057684 3300025923 Unclassified 2655
174 Ga0207681_10093772 3300025923 Bacteria 2150
175 Ga0207681_10137532 3300025923 Bacteria 1815
176 Ga0207650_10067695 3300025925 Bacteria 2680
177 Ga0207650_10076272 3300025925 Bacteria 2532
178 Ga0207650_10166095 3300025925 Unclassified 1751
179 Ga0207659_10162377 3300025926 Unclassified 1755
180 Ga0207644_10005920 3300025931 Bacteria 7973
181 Ga0207644_10198412 3300025931 Bacteria 1582
182 Ga0207644_10235684 3300025931 Bacteria 1456
183 Ga0207690_10011521 3300025932 Bacteria 5282
184 Ga0207690_10021090 3300025932 Bacteria 4036
185 Ga0207690_10175162 3300025932 Bacteria 1610
186 Ga0207706_10001602 3300025933 Bacteria 22464
187 Ga0207706_10004736 3300025933 Bacteria 12739
188 Ga0207706_10015596 3300025933 Bacteria 6864
189 Ga0207706_10054501 3300025933 Bacteria 3529
190 Ga0207706_10059111 3300025933 Bacteria 3376
191 Ga0207706_10211562 3300025933 Bacteria 1700
192 Ga0207670_10112292 3300025936 Bacteria 1966
193 Ga0207669_10067556 3300025937 Unclassified 2228
194 Ga0207704_10082446 3300025938 Bacteria 2083
195 Ga0207704_10114123 3300025938 Unclassified 1833
196 Ga0207691_10000001 3300025940 Bacteria 220829
197 Ga0207691_10011858 3300025940 Bacteria 8365
198 Ga0207691_10063780 3300025940 Bacteria 3341
199 Ga0207689_10001428 3300025942 Bacteria 22805
200 Ga0207689_10030175 3300025942 Bacteria 4518
201 Ga0207689_10034078 3300025942 Bacteria 4229
202 Ga0207689_10053534 3300025942 Bacteria 3325
203 Ga0207689_10104041 3300025942 Unclassified 2333
204 Ga0207661_10002525 3300025944 Bacteria 12595
205 Ga0207661_10033074 3300025944 Bacteria 4011
206 Ga0207679_10001836 3300025945 Bacteria 13215
207 Ga0207679_10014172 3300025945 Bacteria 5235
208 Ga0207679_10042258 3300025945 Bacteria 3275
209 Ga0207679_10143811 3300025945 Unclassified 1931
210 Ga0207679_10207162 3300025945 Bacteria 1642
211 Ga0207667_10030039 3300025949 Bacteria 5884
212 Ga0207651_10007287 3300025960 Bacteria 5880
213 Ga0207712_10003881 3300025961 Bacteria 9447
214 Ga0207668_10000896 3300025972 Bacteria 17994
215 Ga0207640_10145611 3300025981 Bacteria 1733
216 Ga0207658_10008790 3300025986 Bacteria 6857
217 Ga0207658_10088106 3300025986 Bacteria 2399
218 Ga0207677_10101170 3300026023 Unclassified 2121
219 Ga0207677_10160390 3300026023 Bacteria 1746
220 Ga0207703_10011993 3300026035 Bacteria 6750
221 Ga0207703_10143143 3300026035 Bacteria 2077
222 Ga0207639_10022569 3300026041 Unclassified 4534
223 Ga0207639_10333385 3300026041 Bacteria 1351
224 Ga0207678_10008668 3300026067 Bacteria 8956
225 Ga0207702_10091261 3300026078 Unclassified 2667
226 Ga0207702_10130691 3300026078 Unclassified 2259
227 Ga0207702_10219536 3300026078 Bacteria 1771
228 Ga0207641_10163564 3300026088 Bacteria 2025
229 Ga0207648_10000727 3300026089 Bacteria 36875
230 Ga0207648_10066259 3300026089 Bacteria 3149
231 Ga0207648_10139014 3300026089 Bacteria 2140
232 Ga0207676_10001058 3300026095 Bacteria 20966
233 Ga0207676_10154049 3300026095 Bacteria 1983
234 Ga0207676_10232143 3300026095 Bacteria 1650
235 Ga0207674_10001258 3300026116 Bacteria 33135
236 Ga0207674_10032452 3300026116 Bacteria 5477
237 Ga0207674_10039676 3300026116 Bacteria 4880
238 Ga0207674_10083723 3300026116 Bacteria 3189
239 Ga0207674_10132623 3300026116 Bacteria 2454
240 Ga0207674_10224052 3300026116 Bacteria 1829
241 Ga0207675_100351826 3300026118 Bacteria 1444
242 Ga0207683_10001354 3300026121 Bacteria 22147
243 Ga0207683_10011208 3300026121 Bacteria 7641
244 Ga0207683_10177036 3300026121 Bacteria 1933
245 Ga0268266_10002856 3300028379 Bacteria 17998
246 Ga0268266_10047683 3300028379 Bacteria 3672
247 Ga0268266_10181537 3300028379 Unclassified 1916
248 Ga0268265_10022489 3300028380 Bacteria 4431
249 Ga0268264_10009723 3300028381 Bacteria 7961
250 Ga0268264_10020229 3300028381 Bacteria 5440
251 Ga0268264_10049044 3300028381 Bacteria 3512
252 Ga0268264_10260145 3300028381 Bacteria 1616
253 Ga0265327_10000389 3300031251 Bacteria 82772
254 Ga0265327_10008956 3300031251 Bacteria 7337
255 Ga0265316_10012862 3300031344 Bacteria 7473
256 Ga0307513_10060665 3300031456 Bacteria 4009
257 Ga0307513_10073958 3300031456 Bacteria 3546
258 Ga0307414_10116473 3300032004 Bacteria 2046
259 Ga0307510_10141283 3300033180 Bacteria 2050
260 Ga0373947_0037417 3300035725 Unclassified 2880
261 Ga0373937_0072107 3300036401 Bacteria 3185
262 Ga0395905_0296886 3300037471 Unclassified 1503
263 Ga0439439_0012910 3300041406 Bacteria 2022
264 Ga0451800_0832301 3300041459 Bacteria 1568
265 Ga0451853_3014767 3300041512 Unclassified 1311
266 Ga0439457_007236 3300042014 Bacteria 2671
267 Ga0466972_0000011 3300044658 Bacteria 249697
268 Ga0466957_0002103 3300044842 Bacteria 10649
269 Ga0466967_0104108 3300045976 Bacteria 2598
270 Ga0495638_0062389 3300046460 Unclassified 2301
271 Ga0495606_0002459 3300046507 Bacteria 21479
272 Ga0495608_0029646 3300046511 Bacteria 3710
273 Ga0495618_0162204 3300046514 Bacteria 1425
274 Ga0495645_0132215 3300046543 Bacteria 1748
275 Ga0495604_0168075 3300047317 Bacteria 1545
276 Ga0495674_0109187 3300047319 Bacteria 2347
277 Ga0495676_0144246 3300047321 Unclassified 1703
278 Ga0495686_0000005 3300047472 Bacteria 827143
279 Ga0496101_0087129 3300048904 Unclassified 2317
280 Ga0496104_0169758 3300048907 Unclassified 2092
281 Ga0496109_0212602 3300048912 Bacteria 1819
282 Ga0496110_0382608 3300048913 Bacteria 1282
283 Ga0496111_0106687 3300048914 Bacteria 2062
284 Ga0501032_0078510 3300049569 Bacteria 2198
285 Ga0501036_0294571 3300049572 Bacteria 1357
286 Ga0501037_0194828 3300049573 Bacteria 1434
287 Ga0501043_0068021 3300049579 Bacteria 2797
288 Ga0501046_0014333 3300049580 Bacteria 6694
289 Ga0501047_0055429 3300049581 Bacteria 3834
290 Ga0501047_0076147 3300049581 Bacteria 3229
291 Ga0501047_0079543 3300049581 Bacteria 3152
292 Ga0501047_0262014 3300049581 Bacteria 1576
293 Ga0501067_0006973 3300049583 Bacteria 6269
294 Ga0501069_0031791 3300049585 Bacteria 2904
295 Ga0501072_0200466 3300049588 Bacteria 1591
296 Ga0501073_0009006 3300049589 Bacteria 7370
297 Ga0501074_0034691 3300049590 Unclassified 3657
298 Ga0501225_0000826 3300049705 Bacteria 9634
299 Ga0501080_0323158 3300049742 Bacteria 1396
300 Ga0501080_0342786 3300049742 Bacteria 1350
301 Ga0501083_0039811 3300049744 Bacteria 3191
302 Ga0501035_0347439 3300049822 Bacteria 1242
303 Ga0501044_0031987 3300049823 Bacteria 5531
304 Ga0501044_0195884 3300049823 Bacteria 1981
305 nmdc:mga05p37_2026_c1 3300050507 Bacteria 23622
306 nmdc:mga09592_81024_c1 3300050508 Bacteria 2765
307 nmdc:mga06r32_88377_c1 3300050510 Bacteria 3025
308 nmdc:mga08y16_215309_c1 3300050511 Bacteria 1989
309 nmdc:mga0n895_96377_c1 3300050512 Bacteria 2963
310 Ga0500578_0000190 3300053086 Bacteria 74445
311 Ga0500583_0000066 3300053092 Bacteria 65583
312 Ga0500583_0000480 3300053092 Bacteria 12378
313 Ga0500641_0011440 3300053096 Unclassified 3221
314 Ga0500568_0002667 3300053139 Bacteria 10353
315 Ga0501084_0025011 3300054114 Bacteria 4982
316 2738727441 2738541278 Bacteria 9755573
317 Ga0495668_0049837
318 rootH1_10134284
319 rootL2_10247718
320 rootH1_10015492
321 rootH1_10027285
322 rootH1_10033678
323 Ga0070676_10039355
324 Ga0070683_100000490
325 Ga0070683_100019095
326 Ga0070683_100154983
327 Ga0070690_100031097
328 Ga0070690_100034634
329 Ga0070670_100030472
330 Ga0070670_100036659
331 Ga0070670_100125007
332 Ga0070670_100143418
333 Ga0068869_100011482
334 Ga0068869_100019044
335 Ga0068869_100157756
336 Ga0070666_10015993
337 Ga0070666_10063113
338 Ga0070666_10106581
339 Ga0068868_100027816
340 Ga0068868_100028944
341 Ga0068868_100138148
342 Ga0068868_100163201
343 Ga0068868_100214523
344 Ga0068868_100331880
345 Ga0070689_100011947
346 Ga0070689_100015502
347 Ga0070661_100017563
348 Ga0070661_100022108
349 Ga0070668_100001245
350 Ga0070668_100045286
351 Ga0070669_100090716
352 Ga0070669_100153997
353 Ga0070675_100075385
354 Ga0070675_100281212
355 Ga0070671_100014400
356 Ga0070671_100020452
357 Ga0070671_100241184
358 Ga0070674_100009306
359 Ga0070673_100004556
360 Ga0070673_100012571
361 Ga0070688_100085302
362 Ga0070659_100037249
363 Ga0070667_100008720
364 Ga0070667_100036094
365 Ga0070667_100037625
366 Ga0070678_100052338
367 Ga0070662_100017691
368 Ga0070662_100041584
369 Ga0070662_100050141
370 Ga0070662_100182620
371 Ga0068867_100074952
372 Ga0068867_100112907
373 Ga0070679_100019636
374 Ga0070679_100096558
375 Ga0070684_100042072
376 Ga0070684_100061038
377 Ga0070684_100114603
378 Ga0068853_100003840
379 Ga0068853_100026077
380 Ga0070672_100010315
381 Ga0070672_100144350
382 Ga0070693_100044034
383 Ga0068855_100088712
384 Ga0070664_100000887
385 Ga0070664_100034641
386 Ga0068857_100001871
387 Ga0068857_100059655
388 Ga0068857_100066273
389 Ga0068857_100216887
390 Ga0068854_100032981
391 Ga0068854_100362339
392 Ga0068856_100054523
393 Ga0068856_100084717
394 Ga0070702_100016877
395 Ga0068852_100067494
396 Ga0068859_100226520
397 Ga0068864_100001608
398 Ga0068864_100049719
399 Ga0068866_10019328
400 Ga0068870_10013369
401 Ga0068863_100180111
402 Ga0068863_100186375
403 Ga0068858_100356494
404 Ga0068860_100009006
405 Ga0068862_100020948
406 Ga0068862_100198318
407 Ga0068862_100399191
408 Ga0070715_10096076
409 Ga0097621_100001005
410 Ga0097621_100044315
411 Ga0097621_100088849
412 Ga0097621_100166381
413 Ga0097621_100171357
414 Ga0068871_100000069
415 Ga0068871_100009145
416 Ga0068871_100058500
417 Ga0068871_100107192
418 Ga0068871_100208525
419 Ga0075431_100012700
420 Ga0075434_100031919
421 Ga0075429_100016901
422 Ga0068865_100041381
423 Ga0068865_100109035
424 Ga0068865_100115638
425 Ga0097620_100226514
426 Ga0111539_10010793
427 Ga0105247_10009396
428 Ga0114129_10000714
429 Ga0105241_10065397
430 Ga0105241_10067230
431 Ga0105242_10033950
432 Ga0105242_10118294
433 Ga0105248_10029265
434 Ga0105237_10134025
435 Ga0105249_10004771
436 Ga0105249_10068791
437 Ga0105249_10165232
438 Ga0105239_10066827
439 Ga0157373_10005462
440 Ga0157371_10036861
441 Ga0157370_10052408
442 Ga0157369_10390626
443 Ga0157374_10059702
444 Ga0157374_10138792
445 Ga0157374_10181540
446 Ga0157374_10185151
447 Ga0157378_10008357
448 Ga0157378_10046263
449 Ga0157378_10091212
450 Ga0157378_10142527
451 Ga0157378_10246501
452 Ga0163162_10000195
453 Ga0163162_10000957
454 Ga0163162_10002155
455 Ga0163162_10005732
456 Ga0163162_10044495
457 Ga0163162_10073070
458 Ga0163162_10244345
459 Ga0157375_10000646
460 Ga0157375_10085326
461 Ga0157375_10166030
462 Ga0157375_10207680
463 Ga0163163_10000218
464 Ga0163163_10000508
465 Ga0157380_10002431
466 Ga0157379_10031547
467 Ga0157379_10078406
468 Ga0157376_10014637
469 Ga0157376_10138367
470 Ga0157376_10309417
471 Ga0163161_10004735
472 Ga0163161_10006960
473 Ga0163161_10171955
474 Ga0207697_10032152
475 Ga0207688_10005690
476 Ga0207680_10023101
477 Ga0207680_10046842
478 Ga0207680_10091265
479 Ga0207647_10040591
480 Ga0207645_10000898
481 Ga0207645_10012738
482 Ga0207643_10010521
483 Ga0207705_10276706
484 Ga0207695_10049267
485 Ga0207671_10056229
486 Ga0207657_10025950
487 Ga0207652_10036335
488 Ga0207681_10057684
489 Ga0207681_10093772
490 Ga0207681_10137532
491 Ga0207650_10067695
492 Ga0207650_10076272
493 Ga0207650_10166095
494 Ga0207659_10162377
495 Ga0207644_10005920
496 Ga0207644_10198412
497 Ga0207644_10235684
498 Ga0207690_10011521
499 Ga0207690_10021090
500 Ga0207690_10175162
501 Ga0207706_10001602
502 Ga0207706_10004736
503 Ga0207706_10015596
504 Ga0207706_10054501
505 Ga0207706_10059111
506 Ga0207706_10211562
507 Ga0207670_10112292
508 Ga0207669_10067556
509 Ga0207704_10082446
510 Ga0207704_10114123
511 Ga0207691_10000001
512 Ga0207691_10011858
513 Ga0207691_10063780
514 Ga0207689_10001428
515 Ga0207689_10030175
516 Ga0207689_10034078
517 Ga0207689_10053534
518 Ga0207689_10104041
519 Ga0207661_10002525
520 Ga0207661_10033074
521 Ga0207679_10001836
522 Ga0207679_10014172
523 Ga0207679_10042258
524 Ga0207679_10143811
525 Ga0207679_10207162
526 Ga0207667_10030039
527 Ga0207651_10007287
528 Ga0207712_10003881
529 Ga0207668_10000896
530 Ga0207640_10145611
531 Ga0207658_10008790
532 Ga0207658_10088106
533 Ga0207677_10101170
534 Ga0207677_10160390
535 Ga0207703_10011993
536 Ga0207703_10143143
537 Ga0207639_10022569
538 Ga0207639_10333385
539 Ga0207678_10008668
540 Ga0207702_10091261
541 Ga0207702_10130691
542 Ga0207702_10219536
543 Ga0207641_10163564
544 Ga0207648_10000727
545 Ga0207648_10066259
546 Ga0207648_10139014
547 Ga0207676_10001058
548 Ga0207676_10154049
549 Ga0207676_10232143
550 Ga0207674_10001258
551 Ga0207674_10032452
552 Ga0207674_10039676
553 Ga0207674_10083723
554 Ga0207674_10132623
555 Ga0207674_10224052
556 Ga0207675_100351826
557 Ga0207683_10001354
558 Ga0207683_10011208
559 Ga0207683_10177036
560 Ga0268266_10002856
561 Ga0268266_10047683
562 Ga0268266_10181537
563 Ga0268265_10022489
564 Ga0268264_10009723
565 Ga0268264_10020229
566 Ga0268264_10049044
567 Ga0268264_10260145
568 Ga0265327_10000389
569 Ga0265327_10008956
570 Ga0265316_10012862
571 Ga0307513_10060665
572 Ga0307513_10073958
573 Ga0307414_10116473
574 Ga0307510_10141283
575 Ga0373947_0037417
576 Ga0373937_0072107
577 Ga0395905_0296886
578 Ga0439439_0012910
579 Ga0451800_0832301
580 Ga0451853_3014767
581 Ga0439457_007236
582 Ga0466972_0000011
583 Ga0466957_0002103
584 Ga0466967_0104108
585 Ga0495638_0062389
586 Ga0495606_0002459
587 Ga0495608_0029646
588 Ga0495618_0162204
589 Ga0495645_0132215
590 Ga0495604_0168075
591 Ga0495674_0109187
592 Ga0495676_0144246
593 Ga0495686_0000005
594 Ga0496101_0087129
595 Ga0496104_0169758
596 Ga0496109_0212602
597 Ga0496110_0382608
598 Ga0496111_0106687
599 Ga0501032_0078510
600 Ga0501036_0294571
601 Ga0501037_0194828
602 Ga0501043_0068021
603 Ga0501046_0014333
604 Ga0501047_0055429
605 Ga0501047_0076147
606 Ga0501047_0079543
607 Ga0501047_0262014
608 Ga0501067_0006973
609 Ga0501069_0031791
610 Ga0501072_0200466
611 Ga0501073_0009006
612 Ga0501074_0034691
613 Ga0501225_0000826
614 Ga0501080_0323158
615 Ga0501080_0342786
616 Ga0501083_0039811
617 Ga0501035_0347439
618 Ga0501044_0031987
619 Ga0501044_0195884
620 nmdc:mga05p37_2026_c1
621 nmdc:mga09592_81024_c1
622 nmdc:mga06r32_88377_c1
623 nmdc:mga08y16_215309_c1
624 nmdc:mga0n895_96377_c1
625 Ga0500578_0000190
626 Ga0500583_0000066
627 Ga0500583_0000480
628 Ga0500641_0011440
629 Ga0500568_0002667
630 Ga0501084_0025011
631 2738727441

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13905

Thioredoxin_8

Thioredoxin-like

306

404

0.94

PF00578

AhpC-TSA

AhpC/TSA family

88

223

0.93

PF08534

Redoxin

Redoxin

280

421

0.9

PF00578

AhpC-TSA

AhpC/TSA family

287

407

0.87

PF08534

Redoxin

Redoxin

87

241

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2cvb-assembly1.cif.gz_A crystal structure of a thioredoxin-like protein from thermus thermophilus hb8 0.9264 27 217
3u5r-assembly1.cif.gz_E crystal structure of a hypothetical protein smc02350 from sinorhizobium meliloti 1021 0.9234 29 214
1st9-assembly2.cif.gz_B crystal structure of a soluble domain of resa in the oxidised form 0.9229 35 168
2ywi-assembly2.cif.gz_B crystal structure of uncharacterized conserved protein from geobacillus kaustophilus 0.9192 29 213
5um7-assembly1.cif.gz_A crystal structure of the reduced state of the thiol-disulfide reductase sdba from streptococcus gordonii 0.901 33 168
ID Description Score Start End Superfamily
2ywoA00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9275 27 217 3.40.30.10
af_P71990_1_182_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9117 31 213 3.40.30.10
2ywoA00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8846 27 217 3.40.30.10
af_P71990_1_182_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8684 31 213 3.40.30.10
4grfA00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8639 30 165 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A2V6PDT6-F1-model_v4 Redoxin 0.9886 256 368 GO:0016491
GO:0017004
AF-A0A7X9HHY6-F1-model_v4 TlpA family protein disulfide reductase 0.9814 250 376 GO:0016491
GO:0017004
AF-A0A2V9KQ11-F1-model_v4 Redoxin 0.9794 29 207 GO:0016209
GO:0016491
AF-A0A4V1ZD92-F1-model_v4 Redoxin domain-containing protein 0.974 28 376 GO:0016209
GO:0016491
AF-A0A7C1IGB5-F1-model_v4 Thioredoxin family protein 0.9725 29 213 GO:0016491

Map