F402575

General Info

Members Datasets Scaffolds Average Seq Length
314 182 628 372

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100019446|Ga0070698_1000194465
Length 423
Sequence MLRRNETRQHLREEQVDAQPAQREESLDSREMTVARRPRRPHFPSMAGFQRTIDSYRQGARTMPREKYTSDAVFVEERERIFARYWNCVGRASAFIKPGDYHLRTVAGESLIIVRDRGGELHAFFNVCRHRGTRLCRETTGKLSETIQCPYHAWTYGLDGRLIGAPHMNEVEGFDKKNYPLHEAAVAEWEGFVFVNLSEKPQPFNEWFAPILKRLARFTLPMLKVNHRAQYEVNANWKLVFQNYSECLHCPMIHPELNTVLPYTSGANDLTSGPFLGGYMEIKEPNESATLTGRACGRLVNDHLAGNDVKRAYYYTLMPNMMLSVHPDYVNYYLLTPVAVDRTVVDTEWMFSPNNEGDPKFNPQDAIDFWDVTNRQDWDICERSQQGIWSRRYEPGPYSPRESIPAAWDAEYLRMMNNPGNRD

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
24 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
25 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
26 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
27 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
28 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
29 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
30 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
31 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
32 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
33 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
34 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
35 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
36 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
37 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
38 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
39 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
42 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
45 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
46 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
47 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
48 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
49 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
50 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
51 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
52 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
53 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
54 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
55 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
56 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
57 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
58 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
59 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
60 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
61 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
62 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
63 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
64 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
65 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
66 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
67 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
68 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
69 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
70 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
71 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
72 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
73 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
74 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
75 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
76 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
77 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
78 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
79 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
80 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
81 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
82 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
83 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
84 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
85 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
86 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
87 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
88 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
89 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
90 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
91 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
92 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
93 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
94 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
95 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
142 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
146 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
147 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
148 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
149 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
150 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
151 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
152 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
153 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
154 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
155 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
156 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
157 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
158 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
159 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
160 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
161 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
162 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
163 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
164 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
165 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
172 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
173 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
174 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
175 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
176 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
177 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
178 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
179 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
180 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
181 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
182 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.68
Metatranscriptomes 0.32
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.64
Rhizosphere 98.73
Stem 0
Stem Tuber 0
Unclassified 10.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100019446 3300005471 Bacteria 7129
2 JGI25406J46586_10005371 3300003203 Bacteria 5947
3 Ga0065707_10089210 3300005295 Bacteria 4437
4 Ga0070676_10100044 3300005328 Bacteria 1789
5 Ga0070683_100046791 3300005329 Bacteria 3997
6 Ga0070683_100194690 3300005329 Bacteria 1925
7 Ga0070690_100042333 3300005330 Bacteria 2884
8 Ga0070670_100035997 3300005331 Bacteria 4261
9 Ga0070670_100061360 3300005331 Bacteria 3228
10 Ga0070677_10047826 3300005333 Bacteria 1716
11 Ga0068869_100063326 3300005334 Bacteria 2716
12 Ga0070666_10092958 3300005335 Bacteria 2074
13 Ga0070680_100016201 3300005336 Bacteria 5862
14 Ga0070680_100035936 3300005336 Bacteria 4001
15 Ga0070680_100117640 3300005336 Unclassified 2216
16 Ga0070680_100154814 3300005336 Bacteria 1925
17 Ga0070682_100000834 3300005337 Bacteria 17995
18 Ga0068868_100218752 3300005338 Unclassified 1594
19 Ga0070689_100009161 3300005340 Bacteria 7011
20 Ga0070691_10081338 3300005341 Bacteria 1586
21 Ga0070687_100015188 3300005343 Unclassified 3474
22 Ga0070661_100008150 3300005344 Bacteria 7229
23 Ga0070661_100009506 3300005344 Bacteria 6735
24 Ga0070661_100025338 3300005344 Bacteria 4261
25 Ga0070668_100022848 3300005347 Bacteria 4727
26 Ga0070669_100008862 3300005353 Bacteria 7178
27 Ga0070669_100279722 3300005353 Bacteria 1337
28 Ga0070675_100002120 3300005354 Bacteria 14651
29 Ga0070675_100006771 3300005354 Bacteria 8805
30 Ga0070675_100280114 3300005354 Unclassified 1465
31 Ga0070671_100001315 3300005355 Bacteria 18658
32 Ga0070671_100052410 3300005355 Bacteria 3392
33 Ga0070674_100040936 3300005356 Bacteria 3136
34 Ga0070673_100033697 3300005364 Bacteria 3870
35 Ga0070673_100069229 3300005364 Unclassified 2828
36 Ga0070688_100003532 3300005365 Bacteria 8058
37 Ga0070667_100009395 3300005367 Bacteria 8111
38 Ga0070667_100154456 3300005367 Unclassified 2018
39 Ga0070703_10003063 3300005406 Bacteria 4781
40 Ga0070701_10004757 3300005438 Bacteria 5545
41 Ga0070705_100008271 3300005440 Bacteria 5150
42 Ga0070705_100020357 3300005440 Bacteria 3509
43 Ga0070705_100024232 3300005440 Bacteria 3272
44 Ga0070705_100329211 3300005440 Bacteria 1106
45 Ga0070694_100001294 3300005444 Bacteria 14552
46 Ga0070694_100153747 3300005444 Bacteria 1682
47 Ga0070708_100027345 3300005445 Unclassified 4893
48 Ga0070708_100102797 3300005445 Bacteria 2619
49 Ga0070708_100117637 3300005445 Unclassified 2448
50 Ga0070663_100108255 3300005455 Bacteria 2084
51 Ga0070662_100093831 3300005457 Bacteria 2258
52 Ga0070662_100156701 3300005457 Bacteria 1778
53 Ga0070662_100173375 3300005457 Unclassified 1695
54 Ga0070681_10000770 3300005458 Bacteria 26598
55 Ga0070681_10029296 3300005458 Bacteria 5528
56 Ga0070706_100025737 3300005467 Bacteria 5415
57 Ga0070706_100103857 3300005467 Unclassified 2642
58 Ga0070707_100035120 3300005468 Bacteria 4782
59 Ga0070707_100149058 3300005468 Bacteria 2277
60 Ga0070698_100058869 3300005471 Unclassified 3882
61 Ga0070698_100171076 3300005471 Bacteria 2113
62 Ga0070698_100297454 3300005471 Bacteria 1545
63 Ga0070699_100062245 3300005518 Bacteria 3234
64 Ga0070699_100073166 3300005518 Bacteria 2981
65 Ga0070699_100106575 3300005518 Bacteria 2459
66 Ga0070679_100002327 3300005530 Bacteria 17184
67 Ga0070679_100100991 3300005530 Bacteria 2871
68 Ga0070684_100095846 3300005535 Bacteria 2644
69 Ga0070684_100099520 3300005535 Bacteria 2595
70 Ga0070697_100124653 3300005536 Bacteria 2157
71 Ga0070672_100015275 3300005543 Bacteria 5462
72 Ga0070672_100178516 3300005543 Bacteria 1769
73 Ga0070695_100158963 3300005545 Bacteria 1584
74 Ga0070695_100231683 3300005545 Bacteria 1335
75 Ga0070696_100000292 3300005546 Bacteria 30292
76 Ga0070696_100000930 3300005546 Bacteria 18956
77 Ga0070665_100053822 3300005548 Bacteria 4036
78 Ga0070704_100003861 3300005549 Bacteria 8624
79 Ga0070704_100022809 3300005549 Bacteria 4077
80 Ga0070704_100111744 3300005549 Bacteria 2080
81 Ga0070704_100199969 3300005549 Bacteria 1612
82 Ga0068855_100432290 3300005563 Bacteria 1439
83 Ga0070664_100002669 3300005564 Bacteria 14396
84 Ga0070664_100009416 3300005564 Bacteria 7920
85 Ga0070664_100081660 3300005564 Bacteria 2786
86 Ga0068857_100005261 3300005577 Bacteria 11018
87 Ga0068854_100253817 3300005578 Bacteria 1405
88 Ga0070702_100015805 3300005615 Bacteria 3861
89 Ga0068852_100070799 3300005616 Bacteria 3060
90 Ga0068859_100062633 3300005617 Bacteria 3750
91 Ga0068864_100038375 3300005618 Bacteria 4090
92 Ga0068866_10020375 3300005718 Bacteria 3038
93 Ga0068861_100000756 3300005719 Bacteria 19371
94 Ga0068861_100083911 3300005719 Bacteria 2500
95 Ga0068851_10002507 3300005834 Bacteria 8074
96 Ga0068863_100021372 3300005841 Bacteria 6175
97 Ga0068860_100011061 3300005843 Bacteria 8898
98 Ga0068860_100012855 3300005843 Bacteria 8228
99 Ga0068862_100013869 3300005844 Bacteria 6680
100 Ga0081539_10003692 3300005985 Bacteria 18288
101 Ga0070712_100026489 3300006175 Bacteria 3862
102 Ga0075428_100011697 3300006844 Bacteria 9768
103 Ga0075428_100014811 3300006844 Bacteria 8666
104 Ga0075428_100123972 3300006844 Unclassified 2812
105 Ga0075430_100000316 3300006846 Bacteria 34363
106 Ga0075430_100134680 3300006846 Unclassified 2059
107 Ga0075430_100167888 3300006846 Bacteria 1825
108 Ga0075431_100022023 3300006847 Bacteria 6516
109 Ga0075431_100062500 3300006847 Bacteria 3842
110 Ga0075431_100225190 3300006847 Unclassified 1912
111 Ga0075431_100362480 3300006847 Bacteria 1456
112 Ga0075433_10027378 3300006852 Bacteria 4835
113 Ga0075433_10143617 3300006852 Bacteria 2121
114 Ga0075434_100063262 3300006871 Bacteria 3683
115 Ga0075434_100075262 3300006871 Bacteria 3369
116 Ga0075429_100005892 3300006880 Bacteria 10578
117 Ga0075429_100019238 3300006880 Bacteria 5915
118 Ga0075429_100031578 3300006880 Bacteria 4602
119 Ga0075429_100158064 3300006880 Bacteria 1985
120 Ga0075429_100216705 3300006880 Bacteria 1677
121 Ga0068865_100064968 3300006881 Bacteria 2569
122 Ga0075436_100014642 3300006914 Bacteria 5376
123 Ga0075436_100018695 3300006914 Bacteria 4744
124 Ga0075436_100118972 3300006914 Unclassified 1847
125 Ga0097620_100062628 3300006931 Bacteria 3750
126 Ga0097620_100205789 3300006931 Bacteria 2053
127 Ga0075435_100008728 3300007076 Bacteria 7292
128 Ga0075435_100028302 3300007076 Bacteria 4394
129 Ga0075435_100330474 3300007076 Bacteria 1305
130 Ga0099794_10000076 3300007265 Bacteria 36243
131 Ga0105240_10352908 3300009093 Bacteria 1668
132 Ga0105240_10353113 3300009093 Bacteria 1667
133 Ga0111539_10000443 3300009094 Bacteria 52287
134 Ga0111539_10105846 3300009094 Bacteria 3300
135 Ga0105245_10357879 3300009098 Bacteria 1448
136 Ga0114129_10146179 3300009147 Unclassified 3239
137 Ga0114129_10402913 3300009147 Bacteria 1803
138 Ga0114129_10671263 3300009147 Bacteria 1335
139 Ga0105243_10246378 3300009148 Unclassified 1593
140 Ga0105242_10049881 3300009176 Bacteria 3407
141 Ga0105248_10009404 3300009177 Bacteria 10762
142 Ga0105237_10336714 3300009545 Bacteria 1513
143 Ga0105238_10338869 3300009551 Bacteria 1491
144 Ga0105249_10078737 3300009553 Bacteria 3059
145 Ga0157373_10008057 3300013100 Bacteria 7831
146 Ga0157373_10022835 3300013100 Bacteria 4537
147 Ga0157370_10024610 3300013104 Bacteria 5962
148 Ga0157370_10112907 3300013104 Bacteria 2539
149 Ga0157369_10009099 3300013105 Bacteria 11366
150 Ga0157369_10149926 3300013105 Unclassified 2465
151 Ga0157374_10025768 3300013296 Bacteria 5285
152 Ga0157378_10056028 3300013297 Bacteria 3512
153 Ga0163162_10203874 3300013306 Unclassified 2107
154 Ga0163162_10443428 3300013306 Bacteria 1430
155 Ga0163162_10457674 3300013306 Unclassified 1408
156 Ga0157372_10009477 3300013307 Bacteria 10355
157 Ga0157372_10011456 3300013307 Bacteria 9429
158 Ga0157372_10432142 3300013307 Bacteria 1535
159 Ga0157375_10144603 3300013308 Bacteria 2508
160 Ga0157375_10439643 3300013308 Bacteria 1470
161 Ga0157380_10142347 3300014326 Bacteria 2062
162 Ga0157379_10019001 3300014968 Bacteria 6067
163 Ga0182007_10004174 3300015262 Bacteria 6619
164 Ga0206356_11237911 3300020070 Bacteria 2789
165 Ga0213876_10037162 3300021384 Bacteria 2569
166 Ga0207653_10000024 3300025885 Bacteria 117069
167 Ga0207682_10048590 3300025893 Bacteria 1749
168 Ga0207680_10046714 3300025903 Bacteria 2561
169 Ga0207647_10020589 3300025904 Bacteria 4420
170 Ga0207645_10035811 3300025907 Unclassified 3187
171 Ga0207643_10137477 3300025908 Bacteria 1458
172 Ga0207684_10103868 3300025910 Bacteria 2430
173 Ga0207684_10183319 3300025910 Bacteria 1805
174 Ga0207684_10232979 3300025910 Bacteria 1589
175 Ga0207707_10009773 3300025912 Bacteria 8321
176 Ga0207707_10045275 3300025912 Bacteria 3835
177 Ga0207707_10406852 3300025912 Bacteria 1168
178 Ga0207695_10009856 3300025913 Bacteria 11741
179 Ga0207695_10071557 3300025913 Bacteria 3542
180 Ga0207695_10176630 3300025913 Bacteria 2058
181 Ga0207695_10198637 3300025913 Bacteria 1921
182 Ga0207671_10136449 3300025914 Bacteria 1887
183 Ga0207693_10109962 3300025915 Bacteria 2161
184 Ga0207663_10132943 3300025916 Bacteria 1722
185 Ga0207660_10021252 3300025917 Bacteria 4363
186 Ga0207657_10021915 3300025919 Bacteria 5999
187 Ga0207649_10007144 3300025920 Bacteria 6068
188 Ga0207649_10007913 3300025920 Bacteria 5785
189 Ga0207652_10005838 3300025921 Bacteria 9972
190 Ga0207652_10030494 3300025921 Bacteria 4517
191 Ga0207652_10104932 3300025921 Bacteria 2500
192 Ga0207681_10030692 3300025923 Bacteria 3506
193 Ga0207681_10115559 3300025923 Unclassified 1959
194 Ga0207681_10133027 3300025923 Bacteria 1841
195 Ga0207694_10246687 3300025924 Bacteria 1460
196 Ga0207650_10031989 3300025925 Bacteria 3804
197 Ga0207659_10091210 3300025926 Bacteria 2276
198 Ga0207659_10284464 3300025926 Bacteria 1353
199 Ga0207700_10209921 3300025928 Bacteria 1646
200 Ga0207664_10066050 3300025929 Bacteria 2898
201 Ga0207706_10001108 3300025933 Bacteria 27407
202 Ga0207706_10057293 3300025933 Unclassified 3433
203 Ga0207706_10143573 3300025933 Bacteria 2100
204 Ga0207706_10177082 3300025933 Bacteria 1874
205 Ga0207709_10206987 3300025935 Unclassified 1405
206 Ga0207704_10049048 3300025938 Unclassified 2537
207 Ga0207691_10001488 3300025940 Bacteria 23357
208 Ga0207691_10022306 3300025940 Bacteria 5972
209 Ga0207691_10051901 3300025940 Bacteria 3747
210 Ga0207711_10136175 3300025941 Bacteria 2206
211 Ga0207689_10007572 3300025942 Bacteria 9517
212 Ga0207689_10014743 3300025942 Bacteria 6636
213 Ga0207689_10032155 3300025942 Bacteria 4365
214 Ga0207661_10008715 3300025944 Bacteria 7252
215 Ga0207661_10151278 3300025944 Bacteria 2006
216 Ga0207679_10007586 3300025945 Bacteria 6889
217 Ga0207679_10009138 3300025945 Bacteria 6336
218 Ga0207679_10105490 3300025945 Bacteria 2213
219 Ga0207667_10333955 3300025949 Bacteria 1547
220 Ga0207651_10085606 3300025960 Bacteria 2288
221 Ga0207651_10190342 3300025960 Bacteria 1636
222 Ga0207712_10002029 3300025961 Bacteria 13283
223 Ga0207712_10048621 3300025961 Bacteria 2951
224 Ga0207668_10026503 3300025972 Bacteria 3764
225 Ga0207640_10080658 3300025981 Bacteria 2222
226 Ga0207658_10179641 3300025986 Bacteria 1750
227 Ga0207703_10073195 3300026035 Bacteria 2834
228 Ga0207639_10038890 3300026041 Bacteria 3541
229 Ga0207678_10090343 3300026067 Bacteria 2618
230 Ga0207708_10029040 3300026075 Bacteria 4189
231 Ga0207641_10032200 3300026088 Bacteria 4353
232 Ga0207676_10028906 3300026095 Bacteria 4146
233 Ga0207674_10000161 3300026116 Bacteria 79934
234 Ga0207674_10008152 3300026116 Bacteria 12146
235 Ga0207675_100001064 3300026118 Bacteria 27248
236 Ga0207675_100105516 3300026118 Bacteria 2656
237 Ga0207698_10046824 3300026142 Bacteria 3270
238 Ga0209588_1005170 3300027671 Bacteria 3722
239 Ga0207428_10008438 3300027907 Bacteria 9300
240 Ga0268266_10133015 3300028379 Bacteria 2226
241 Ga0268265_10038196 3300028380 Bacteria 3530
242 Ga0268264_10139038 3300028381 Bacteria 2163
243 Ga0307408_100000748 3300031548 Bacteria 26281
244 Ga0307406_10001243 3300031901 Bacteria 14279
245 Ga0307406_10140220 3300031901 Unclassified 1710
246 Ga0307412_10090252 3300031911 Unclassified 2141
247 Ga0373937_0156024 3300036401 Bacteria 2139
248 Ga0242420_000644 3300038996 Bacteria 4092
249 Ga0436365_0005834 3300039437 Bacteria 2270
250 Ga0451577_0028295 3300042876 Bacteria 5069
251 Ga0451577_0044422 3300042876 Bacteria 3978
252 Ga0451577_0057793 3300042876 Unclassified 3457
253 Ga0451577_0136038 3300042876 Bacteria 2207
254 Ga0453683_0000008 3300044673 Bacteria 542336
255 Ga0453683_0024265 3300044673 Bacteria 3860
256 Ga0453683_0079219 3300044673 Bacteria 2057
257 Ga0453684_0060945 3300044712 Unclassified 4847
258 Ga0453684_0378281 3300044712 Bacteria 1591
259 Ga0451576_0000005 3300045051 Bacteria 1294643
260 Ga0451576_0005723 3300045051 Bacteria 15483
261 Ga0451576_0010132 3300045051 Bacteria 10850
262 Ga0451576_0025823 3300045051 Bacteria 6327
263 Ga0451576_0071274 3300045051 Bacteria 3616
264 Ga0451576_0097891 3300045051 Bacteria 3050
265 Ga0451576_0144145 3300045051 Bacteria 2484
266 Ga0451576_0171286 3300045051 Bacteria 2266
267 Ga0451576_0420220 3300045051 Bacteria 1402
268 Ga0466967_0047245 3300045976 Bacteria 3752
269 Ga0495580_0098289 3300046472 Bacteria 2036
270 Ga0495582_0013493 3300046473 Bacteria 4498
271 Ga0495609_0038803 3300046538 Bacteria 2146
272 Ga0495659_0000767 3300046664 Bacteria 11518
273 Ga0495658_0074969 3300046683 Bacteria 1973
274 Ga0495581_0140491 3300047315 Unclassified 1409
275 Ga0495672_0007190 3300047320 Bacteria 8413
276 Ga0496109_0066113 3300048912 Bacteria 3310
277 Ga0496112_0084362 3300048915 Bacteria 3142
278 Ga0501031_0131291 3300049568 Bacteria 1636
279 Ga0501038_0093722 3300049574 Bacteria 2512
280 Ga0501040_0003349 3300049576 Bacteria 10357
281 Ga0501042_0044486 3300049578 Unclassified 3164
282 Ga0501043_0239603 3300049579 Bacteria 1399
283 Ga0501046_0224144 3300049580 Bacteria 1391
284 Ga0501072_0168318 3300049588 Bacteria 1749
285 Ga0501072_0206358 3300049588 Bacteria 1567
286 Ga0501075_0234506 3300049591 Bacteria 1399
287 Ga0501076_0046126 3300049592 Bacteria 3443
288 Ga0501076_0101226 3300049592 Bacteria 2322
289 Ga0501045_0005292 3300049824 Bacteria 8939
290 nmdc:mga09592_131300_c1 3300050508 Bacteria 2155
291 nmdc:mga09592_20075_c1 3300050508 Bacteria 5491
292 nmdc:mga0qj67_1072_c1 3300050509 Bacteria 18940
293 nmdc:mga0qj67_110804_c1 3300050509 Unclassified 2216
294 nmdc:mga0qj67_9083_c2 3300050509 Bacteria 5340
295 nmdc:mga06r32_11999_c1 3300050510 Bacteria 7810
296 nmdc:mga06r32_13021_c1 3300050510 Bacteria 7525
297 nmdc:mga06r32_268845_c1 3300050510 Bacteria 1692
298 nmdc:mga06r32_48565_c1 3300050510 Bacteria 4057
299 nmdc:mga08y16_132_c1 3300050511 Bacteria 64594
300 nmdc:mga08y16_16893_c1 3300050511 Bacteria 7684
301 nmdc:mga0n895_11331_c1 3300050512 Bacteria 7947
302 nmdc:mga0n895_177563_c1 3300050512 Bacteria 2161
303 nmdc:mga0n895_28323_c1 3300050512 Bacteria 5328
304 nmdc:mga0n895_65482_c1 3300050512 Bacteria 3597
305 nmdc:mga0rr50_325317_c1 3300050513 Bacteria 1290
306 nmdc:mga0rr50_5504_c1 3300050513 Bacteria 7563
307 nmdc:mga0rr50_5911_c1 3300050513 Bacteria 7364
308 nmdc:mga0rr50_83229_c1 3300050513 Bacteria 2473
309 nmdc:mga0rr50_89472_c1 3300050513 Bacteria 2394
310 nmdc:mga08x19_3999_c1 3300050514 Bacteria 8773
311 nmdc:mga08x19_41600_c1 3300050514 Bacteria 2927
312 nmdc:mga08x19_5642_c1 3300050514 Bacteria 7395
313 nmdc:mga0a205_30427_c1 3300050515 Bacteria 5169
314 nmdc:mga0a205_34912_c1 3300050515 Bacteria 4827
315 Ga0070698_100019446
316 JGI25406J46586_10005371
317 Ga0065707_10089210
318 Ga0070676_10100044
319 Ga0070683_100046791
320 Ga0070683_100194690
321 Ga0070690_100042333
322 Ga0070670_100035997
323 Ga0070670_100061360
324 Ga0070677_10047826
325 Ga0068869_100063326
326 Ga0070666_10092958
327 Ga0070680_100016201
328 Ga0070680_100035936
329 Ga0070680_100117640
330 Ga0070680_100154814
331 Ga0070682_100000834
332 Ga0068868_100218752
333 Ga0070689_100009161
334 Ga0070691_10081338
335 Ga0070687_100015188
336 Ga0070661_100008150
337 Ga0070661_100009506
338 Ga0070661_100025338
339 Ga0070668_100022848
340 Ga0070669_100008862
341 Ga0070669_100279722
342 Ga0070675_100002120
343 Ga0070675_100006771
344 Ga0070675_100280114
345 Ga0070671_100001315
346 Ga0070671_100052410
347 Ga0070674_100040936
348 Ga0070673_100033697
349 Ga0070673_100069229
350 Ga0070688_100003532
351 Ga0070667_100009395
352 Ga0070667_100154456
353 Ga0070703_10003063
354 Ga0070701_10004757
355 Ga0070705_100008271
356 Ga0070705_100020357
357 Ga0070705_100024232
358 Ga0070705_100329211
359 Ga0070694_100001294
360 Ga0070694_100153747
361 Ga0070708_100027345
362 Ga0070708_100102797
363 Ga0070708_100117637
364 Ga0070663_100108255
365 Ga0070662_100093831
366 Ga0070662_100156701
367 Ga0070662_100173375
368 Ga0070681_10000770
369 Ga0070681_10029296
370 Ga0070706_100025737
371 Ga0070706_100103857
372 Ga0070707_100035120
373 Ga0070707_100149058
374 Ga0070698_100058869
375 Ga0070698_100171076
376 Ga0070698_100297454
377 Ga0070699_100062245
378 Ga0070699_100073166
379 Ga0070699_100106575
380 Ga0070679_100002327
381 Ga0070679_100100991
382 Ga0070684_100095846
383 Ga0070684_100099520
384 Ga0070697_100124653
385 Ga0070672_100015275
386 Ga0070672_100178516
387 Ga0070695_100158963
388 Ga0070695_100231683
389 Ga0070696_100000292
390 Ga0070696_100000930
391 Ga0070665_100053822
392 Ga0070704_100003861
393 Ga0070704_100022809
394 Ga0070704_100111744
395 Ga0070704_100199969
396 Ga0068855_100432290
397 Ga0070664_100002669
398 Ga0070664_100009416
399 Ga0070664_100081660
400 Ga0068857_100005261
401 Ga0068854_100253817
402 Ga0070702_100015805
403 Ga0068852_100070799
404 Ga0068859_100062633
405 Ga0068864_100038375
406 Ga0068866_10020375
407 Ga0068861_100000756
408 Ga0068861_100083911
409 Ga0068851_10002507
410 Ga0068863_100021372
411 Ga0068860_100011061
412 Ga0068860_100012855
413 Ga0068862_100013869
414 Ga0081539_10003692
415 Ga0070712_100026489
416 Ga0075428_100011697
417 Ga0075428_100014811
418 Ga0075428_100123972
419 Ga0075430_100000316
420 Ga0075430_100134680
421 Ga0075430_100167888
422 Ga0075431_100022023
423 Ga0075431_100062500
424 Ga0075431_100225190
425 Ga0075431_100362480
426 Ga0075433_10027378
427 Ga0075433_10143617
428 Ga0075434_100063262
429 Ga0075434_100075262
430 Ga0075429_100005892
431 Ga0075429_100019238
432 Ga0075429_100031578
433 Ga0075429_100158064
434 Ga0075429_100216705
435 Ga0068865_100064968
436 Ga0075436_100014642
437 Ga0075436_100018695
438 Ga0075436_100118972
439 Ga0097620_100062628
440 Ga0097620_100205789
441 Ga0075435_100008728
442 Ga0075435_100028302
443 Ga0075435_100330474
444 Ga0099794_10000076
445 Ga0105240_10352908
446 Ga0105240_10353113
447 Ga0111539_10000443
448 Ga0111539_10105846
449 Ga0105245_10357879
450 Ga0114129_10146179
451 Ga0114129_10402913
452 Ga0114129_10671263
453 Ga0105243_10246378
454 Ga0105242_10049881
455 Ga0105248_10009404
456 Ga0105237_10336714
457 Ga0105238_10338869
458 Ga0105249_10078737
459 Ga0157373_10008057
460 Ga0157373_10022835
461 Ga0157370_10024610
462 Ga0157370_10112907
463 Ga0157369_10009099
464 Ga0157369_10149926
465 Ga0157374_10025768
466 Ga0157378_10056028
467 Ga0163162_10203874
468 Ga0163162_10443428
469 Ga0163162_10457674
470 Ga0157372_10009477
471 Ga0157372_10011456
472 Ga0157372_10432142
473 Ga0157375_10144603
474 Ga0157375_10439643
475 Ga0157380_10142347
476 Ga0157379_10019001
477 Ga0182007_10004174
478 Ga0206356_11237911
479 Ga0213876_10037162
480 Ga0207653_10000024
481 Ga0207682_10048590
482 Ga0207680_10046714
483 Ga0207647_10020589
484 Ga0207645_10035811
485 Ga0207643_10137477
486 Ga0207684_10103868
487 Ga0207684_10183319
488 Ga0207684_10232979
489 Ga0207707_10009773
490 Ga0207707_10045275
491 Ga0207707_10406852
492 Ga0207695_10009856
493 Ga0207695_10071557
494 Ga0207695_10176630
495 Ga0207695_10198637
496 Ga0207671_10136449
497 Ga0207693_10109962
498 Ga0207663_10132943
499 Ga0207660_10021252
500 Ga0207657_10021915
501 Ga0207649_10007144
502 Ga0207649_10007913
503 Ga0207652_10005838
504 Ga0207652_10030494
505 Ga0207652_10104932
506 Ga0207681_10030692
507 Ga0207681_10115559
508 Ga0207681_10133027
509 Ga0207694_10246687
510 Ga0207650_10031989
511 Ga0207659_10091210
512 Ga0207659_10284464
513 Ga0207700_10209921
514 Ga0207664_10066050
515 Ga0207706_10001108
516 Ga0207706_10057293
517 Ga0207706_10143573
518 Ga0207706_10177082
519 Ga0207709_10206987
520 Ga0207704_10049048
521 Ga0207691_10001488
522 Ga0207691_10022306
523 Ga0207691_10051901
524 Ga0207711_10136175
525 Ga0207689_10007572
526 Ga0207689_10014743
527 Ga0207689_10032155
528 Ga0207661_10008715
529 Ga0207661_10151278
530 Ga0207679_10007586
531 Ga0207679_10009138
532 Ga0207679_10105490
533 Ga0207667_10333955
534 Ga0207651_10085606
535 Ga0207651_10190342
536 Ga0207712_10002029
537 Ga0207712_10048621
538 Ga0207668_10026503
539 Ga0207640_10080658
540 Ga0207658_10179641
541 Ga0207703_10073195
542 Ga0207639_10038890
543 Ga0207678_10090343
544 Ga0207708_10029040
545 Ga0207641_10032200
546 Ga0207676_10028906
547 Ga0207674_10000161
548 Ga0207674_10008152
549 Ga0207675_100001064
550 Ga0207675_100105516
551 Ga0207698_10046824
552 Ga0209588_1005170
553 Ga0207428_10008438
554 Ga0268266_10133015
555 Ga0268265_10038196
556 Ga0268264_10139038
557 Ga0307408_100000748
558 Ga0307406_10001243
559 Ga0307406_10140220
560 Ga0307412_10090252
561 Ga0373937_0156024
562 Ga0242420_000644
563 Ga0436365_0005834
564 Ga0451577_0028295
565 Ga0451577_0044422
566 Ga0451577_0057793
567 Ga0451577_0136038
568 Ga0453683_0000008
569 Ga0453683_0024265
570 Ga0453683_0079219
571 Ga0453684_0060945
572 Ga0453684_0378281
573 Ga0451576_0000005
574 Ga0451576_0005723
575 Ga0451576_0010132
576 Ga0451576_0025823
577 Ga0451576_0071274
578 Ga0451576_0097891
579 Ga0451576_0144145
580 Ga0451576_0171286
581 Ga0451576_0420220
582 Ga0466967_0047245
583 Ga0495580_0098289
584 Ga0495582_0013493
585 Ga0495609_0038803
586 Ga0495659_0000767
587 Ga0495658_0074969
588 Ga0495581_0140491
589 Ga0495672_0007190
590 Ga0496109_0066113
591 Ga0496112_0084362
592 Ga0501031_0131291
593 Ga0501038_0093722
594 Ga0501040_0003349
595 Ga0501042_0044486
596 Ga0501043_0239603
597 Ga0501046_0224144
598 Ga0501072_0168318
599 Ga0501072_0206358
600 Ga0501075_0234506
601 Ga0501076_0046126
602 Ga0501076_0101226
603 Ga0501045_0005292
604 nmdc:mga09592_131300_c1
605 nmdc:mga09592_20075_c1
606 nmdc:mga0qj67_1072_c1
607 nmdc:mga0qj67_110804_c1
608 nmdc:mga0qj67_9083_c2
609 nmdc:mga06r32_11999_c1
610 nmdc:mga06r32_13021_c1
611 nmdc:mga06r32_268845_c1
612 nmdc:mga06r32_48565_c1
613 nmdc:mga08y16_132_c1
614 nmdc:mga08y16_16893_c1
615 nmdc:mga0n895_11331_c1
616 nmdc:mga0n895_177563_c1
617 nmdc:mga0n895_28323_c1
618 nmdc:mga0n895_65482_c1
619 nmdc:mga0rr50_325317_c1
620 nmdc:mga0rr50_5504_c1
621 nmdc:mga0rr50_5911_c1
622 nmdc:mga0rr50_83229_c1
623 nmdc:mga0rr50_89472_c1
624 nmdc:mga08x19_3999_c1
625 nmdc:mga08x19_41600_c1
626 nmdc:mga08x19_5642_c1
627 nmdc:mga0a205_30427_c1
628 nmdc:mga0a205_34912_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00848

Ring_hydroxyl_A

Ring hydroxylating alpha subunit (catalytic domain)

220

418

0.91

PF00355

Rieske

Rieske [2Fe-2S] domain

85

180

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4qur-assembly1.cif.gz_A crystal structure of stachydrine demethylase in complex with cyanide, oxygen, and n-methyl proline in a new orientation 0.8962 12 372
4quq-assembly1.cif.gz_A crystal structure of stachydrine demethylase in complex with azide 0.8928 12 372
3vca-assembly1.cif.gz_A quaternary ammonium oxidative demethylation: x-ray crystallographic, resonance raman and uv-visible spectroscopic analysis of a rieske-type demethylase 0.89 12 372
4qup-assembly1.cif.gz_A crystal structure of stachydrine demethylase with n-methyl proline from low x-ray dose composite datasets 0.883 7 372
3n0q-assembly1.cif.gz_A crystal structure of a putative aromatic-ring hydroxylating dioxygenase (tm1040_3219) from silicibacter sp. tm1040 at 1.80 a resolution 0.8819 7 374
ID Description Score Start End Superfamily
af_A0A1D8PL08_48_170_2.102.10.10 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.9558 39 159 2.102.10.10
3n0qA02 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.9547 39 159 2.102.10.10
af_P0ABR7_49_169_2.102.10.10 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.9422 43 161 2.102.10.10
3n0qA02 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.9392 39 159 2.102.10.10
af_A0A1D8PL08_48_170_2.102.10.10 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.9333 39 159 2.102.10.10
ID Description Score Start End GO Terms
AF-A0A382PKG5-F1-model_v4 Rieske domain-containing protein 0.9917 39 137 GO:0016491
GO:0046872
GO:0051537
AF-A0A3M2A522-F1-model_v4 Aromatic ring-hydroxylating dioxygenase subunit alpha 0.9868 15 373 GO:0005506
GO:0051213
GO:0051537
AF-A0A1Q7VAE0-F1-model_v4 (2Fe-2S)-binding protein 0.9838 77 357 GO:0005506
GO:0016491
GO:0051537
AF-A0A1Q7YKM1-F1-model_v4 (2Fe-2S)-binding protein 0.9834 37 373 GO:0005506
GO:0016491
GO:0051537
AF-A0A2D8MYV1-F1-model_v4 (2Fe-2S)-binding protein 0.9795 12 371 GO:0005506
GO:0016491
GO:0051537

Map