F402478

General Info

Members Datasets Scaffolds Average Seq Length
313 219 626 310

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8008485437|8008489967
Length 333
Sequence TGETRTTAVGDTSRPGERKESPMTAALSITDETGGPFALSHLDVLESEAVHIFREVAGEFERPVILFSGGKDSIVMLHLALKAFAPAPPPFSLLHVDTGHNFPEVIAYRDRVVAQHGLRLTVALVQDFIDSGELRERPDGTRNPLQTVPLLRAIETNRFDAVFGGGRRDEEKARAKERVFSLRDEFGGWDPRRQRPELWQLYNGRHAPGEHVRVFPLSNWTELDVWQYIAREKIEIPEIYYAHRREVFLRDGMWLAPGEWGGPKEHETVDVRQVRYRTVGDMSCTGAVESDAETIEQIIAEIAASRLTERGATRADDKLSEAAMEDRKREGYF

Samples

Sample ID Description Type Environment
1 3300003285 Grassland soil microbial communities from Hopland, California, USA - Sample H3_Rhizo_39 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
2 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
8 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
9 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
10 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
11 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
12 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
13 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
14 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
15 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
16 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
17 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
18 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
19 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
20 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
21 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
22 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
23 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
34 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
35 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
36 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
37 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
38 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
39 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
40 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
41 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
42 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
43 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
44 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
45 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
46 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
47 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
48 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
49 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
50 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
51 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
52 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
53 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
54 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
55 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
56 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
57 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
58 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
59 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
60 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
61 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
62 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
63 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
64 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
65 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
66 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
67 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
68 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
69 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
70 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
71 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
72 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
73 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
74 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
75 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
76 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
77 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
78 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
79 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
80 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
81 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
82 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
83 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
84 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
85 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
86 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
87 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
88 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
89 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
90 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
91 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
92 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
93 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
94 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
95 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
96 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
97 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
98 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
99 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
100 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
101 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
102 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
103 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
104 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
105 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
106 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
107 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
108 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
109 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
110 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
111 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
112 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
113 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
114 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
115 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
116 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
119 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
120 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
123 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
126 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
127 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
128 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
142 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
143 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
149 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
150 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
151 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
152 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
153 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
154 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
157 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
158 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
159 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
160 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
161 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
162 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
163 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
164 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
165 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
166 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
167 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
168 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
169 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
170 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
171 2643221548 Streptomyces sp. Root55 Isolate Unclassified
172 2643221578 Streptomyces sp. Root63 Isolate Unclassified
173 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
174 2643221670 Streptomyces sp. Root431 Isolate Unclassified
175 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
176 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
177 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
178 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
179 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
180 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
181 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
182 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
183 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
184 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
185 2857509624 Bradyrhizobium sp. R-73088 Isolate Unclassified
186 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
187 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
188 2862574272 Streptomyces sp. AcE210 Isolate Nodule
189 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
190 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
191 2867369537 Streptomyces sp. Z26 Isolate Unclassified
192 2867475112 Streptomyces sp. TM32 Isolate Unclassified
193 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
194 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
195 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
196 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
197 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
198 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
199 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
200 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
201 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
202 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
203 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
204 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
205 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
206 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
207 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
208 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
209 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
210 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
211 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
212 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
213 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
214 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
215 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
216 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
217 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
218 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
219 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.55
Metatranscriptomes 1.92
Isolates 18.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.88
Nodule 0.32
Rhizoplane 4.79
Rhizosphere 79.87
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0007423J48922_100554 3300003285 Bacteria 5306
2 JGI25160J50197_1013416 3300003354 Bacteria 2793
3 JGI25160J50197_1023055 3300003354 Bacteria 1809
4 Ga0070658_10167320 3300005327 Bacteria 1846
5 Ga0070682_100207403 3300005337 Bacteria 1387
6 Ga0070671_100000399 3300005355 Bacteria 29938
7 Ga0070714_100019064 3300005435 Bacteria 5583
8 Ga0070665_100067957 3300005548 Bacteria 3573
9 Ga0070665_100103566 3300005548 Bacteria 2849
10 Ga0068855_100015969 3300005563 Bacteria 9031
11 Ga0068858_100085034 3300005842 Bacteria 2943
12 Ga0068858_100423825 3300005842 Bacteria 1280
13 Ga0075364_10006293 3300006051 Bacteria 6969
14 Ga0075364_10030759 3300006051 Bacteria 3447
15 Ga0105238_10488329 3300009551 Bacteria 1231
16 Ga0157370_10008319 3300013104 Bacteria 11189
17 Ga0157370_10053955 3300013104 Bacteria 3832
18 Ga0157372_10000103 3300013307 Bacteria 88718
19 Ga0157375_10363950 3300013308 Bacteria 1612
20 Ga0157375_10474561 3300013308 Bacteria 1416
21 Ga0157376_10280949 3300014969 Bacteria 1568
22 Ga0197907_10051208 3300020069 Bacteria 2613
23 Ga0206356_11718079 3300020070 Bacteria 2270
24 Ga0206353_10548595 3300020082 Bacteria 7317
25 Ga0206353_10618931 3300020082 Bacteria 2639
26 Ga0213872_10019119 3300021361 Bacteria 3155
27 Ga0213872_10091713 3300021361 Bacteria 1359
28 Ga0213872_10095739 3300021361 Bacteria 1326
29 Ga0213875_10033835 3300021388 Bacteria 2415
30 Ga0224712_10022350 3300022467 Bacteria 2179
31 Ga0207426_1001177 3300025302 Bacteria 23399
32 Ga0207426_1014513 3300025302 Bacteria 2884
33 Ga0207705_10099953 3300025909 Bacteria 2133
34 Ga0207649_10121416 3300025920 Bacteria 1762
35 Ga0207681_10007300 3300025923 Bacteria 6772
36 Ga0207694_10227701 3300025924 Bacteria 1522
37 Ga0207664_10018097 3300025929 Bacteria 5176
38 Ga0207664_10061590 3300025929 Bacteria 2994
39 Ga0207644_10001153 3300025931 Bacteria 16935
40 Ga0207667_10029600 3300025949 Bacteria 5937
41 Ga0207703_10065647 3300026035 Bacteria 2983
42 Ga0207639_10069557 3300026041 Bacteria 2747
43 Ga0268266_10050975 3300028379 Bacteria 3552
44 Ga0268266_10269852 3300028379 Bacteria 1579
45 Ga0307511_10102550 3300030521 Bacteria 1869
46 Ga0307511_10167316 3300030521 Bacteria 1217
47 Ga0307509_10043043 3300031507 Bacteria 4888
48 Ga0265313_10008334 3300031595 Bacteria 6905
49 Ga0307508_10015847 3300031616 Bacteria 6868
50 Ga0307516_10320119 3300031730 Bacteria 1222
51 Ga0307410_10069208 3300031852 Bacteria 2441
52 Ga0307416_100045296 3300032002 Bacteria 3463
53 Ga0307510_10211395 3300033180 Bacteria 1462
54 Ga0436364_0369741 3300037853 Bacteria 15551
55 Ga0395901_0143121 3300038443 Bacteria 2513
56 Ga0395901_0169583 3300038443 Bacteria 2290
57 Ga0436361_0563024 3300039447 Bacteria 3152
58 Ga0436361_0658394 3300039447 Bacteria 19974
59 Ga0436361_1114604 3300039447 Bacteria 888
60 Ga0436363_1340494 3300039450 Bacteria 1072
61 Ga0439436_0000749 3300041404 Bacteria 8770
62 Ga0439457_000009 3300042014 Bacteria 41871
63 Ga0439462_0045532 3300042015 Bacteria 1175
64 Ga0450898_006112 3300042134 Bacteria 1841
65 Ga0450903_009431 3300042138 Bacteria 1591
66 Ga0466969_0000484 3300044656 Bacteria 21847
67 Ga0466969_0061519 3300044656 Bacteria 1823
68 Ga0466969_0067026 3300044656 Bacteria 1732
69 Ga0466972_0026233 3300044658 Bacteria 2887
70 Ga0466966_0012279 3300044684 Bacteria 5676
71 Ga0466966_0014144 3300044684 Bacteria 5282
72 Ga0466966_0018605 3300044684 Bacteria 4578
73 Ga0466966_0232280 3300044684 Bacteria 1112
74 Ga0466961_0002230 3300044693 Bacteria 12066
75 Ga0466961_0029518 3300044693 Bacteria 3524
76 Ga0466971_0000817 3300044719 Bacteria 12570
77 Ga0466971_0003353 3300044719 Bacteria 6841
78 Ga0466968_0020835 3300044735 Bacteria 2650
79 Ga0466959_0018787 3300045049 Bacteria 5077
80 Ga0466959_0038349 3300045049 Bacteria 3540
81 Ga0466958_0004142 3300045836 Bacteria 7611
82 Ga0466958_0009096 3300045836 Bacteria 5521
83 Ga0466958_0200614 3300045836 Bacteria 1269
84 Ga0466967_0316992 3300045976 Bacteria 1503
85 Ga0466967_0325802 3300045976 Bacteria 1483
86 Ga0495617_024776 3300046452 Bacteria 2025
87 Ga0495592_0000516 3300046454 Bacteria 27942
88 Ga0495592_0005101 3300046454 Bacteria 9674
89 Ga0495603_0013267 3300046455 Bacteria 4982
90 Ga0495603_0033943 3300046455 Bacteria 3069
91 Ga0495629_0000865 3300046459 Bacteria 24384
92 Ga0495629_0000982 3300046459 Bacteria 22889
93 Ga0495629_0011955 3300046459 Bacteria 6294
94 Ga0495629_0039054 3300046459 Bacteria 3342
95 Ga0495629_0107880 3300046459 Bacteria 1942
96 Ga0495629_0110164 3300046459 Bacteria 1919
97 Ga0495651_0004413 3300046462 Bacteria 10777
98 Ga0495580_0222723 3300046472 Bacteria 1296
99 Ga0495582_0000745 3300046473 Bacteria 17987
100 Ga0495582_0156603 3300046473 Bacteria 1295
101 Ga0495605_0007353 3300046474 Bacteria 6253
102 Ga0495662_0001632 3300046476 Bacteria 11161
103 Ga0495664_0028333 3300046477 Bacteria 3270
104 Ga0495585_0000327 3300046492 Bacteria 46566
105 Ga0495585_0052976 3300046492 Bacteria 2246
106 Ga0495594_0000910 3300046499 Bacteria 15347
107 Ga0495594_0018444 3300046499 Bacteria 3695
108 Ga0495594_0023413 3300046499 Bacteria 3309
109 Ga0495594_0043226 3300046499 Bacteria 2469
110 Ga0495607_0039171 3300046501 Bacteria 2832
111 Ga0495583_0031820 3300046506 Bacteria 2553
112 Ga0495610_0032612 3300046512 Bacteria 2704
113 Ga0495616_0016281 3300046513 Bacteria 4119
114 Ga0495618_0012164 3300046514 Bacteria 5225
115 Ga0495618_0064495 3300046514 Bacteria 2327
116 Ga0495620_0047070 3300046515 Bacteria 1858
117 Ga0495628_0015506 3300046516 Bacteria 6363
118 Ga0495628_0020537 3300046516 Bacteria 5445
119 Ga0495637_0025345 3300046520 Bacteria 2673
120 Ga0495643_0005569 3300046522 Bacteria 8477
121 Ga0495643_0097194 3300046522 Bacteria 1513
122 Ga0495648_0063568 3300046524 Bacteria 2178
123 Ga0495652_0008753 3300046529 Bacteria 9212
124 Ga0495640_0079705 3300046533 Bacteria 2179
125 Ga0495609_0023854 3300046538 Bacteria 2809
126 Ga0495645_0017105 3300046543 Bacteria 5193
127 Ga0495645_0350321 3300046543 Bacteria 952
128 Ga0495667_0049301 3300046559 Bacteria 2780
129 Ga0495668_0117103 3300046616 Bacteria 1457
130 Ga0495634_0049764 3300046642 Bacteria 2816
131 Ga0495634_0052083 3300046642 Bacteria 2745
132 Ga0495611_0001810 3300046648 Bacteria 10249
133 Ga0495611_0010340 3300046648 Bacteria 3948
134 Ga0495611_0017160 3300046648 Bacteria 3094
135 Ga0495625_0038552 3300046660 Bacteria 3497
136 Ga0495635_0013327 3300046663 Bacteria 5754
137 Ga0495635_0070461 3300046663 Bacteria 2396
138 Ga0495635_0089560 3300046663 Bacteria 2105
139 Ga0495661_0028891 3300046665 Bacteria 3544
140 Ga0495588_0003939 3300046674 Bacteria 6514
141 Ga0495588_0015381 3300046674 Bacteria 3681
142 Ga0495657_0014567 3300046675 Bacteria 5769
143 Ga0495599_0052608 3300046678 Bacteria 2551
144 Ga0495623_0021961 3300046679 Bacteria 4122
145 Ga0495646_0194087 3300046680 Bacteria 1108
146 Ga0495613_0000824 3300046689 Bacteria 24009
147 Ga0495613_0001044 3300046689 Bacteria 21114
148 Ga0495613_0002824 3300046689 Bacteria 13032
149 Ga0495613_0182809 3300046689 Bacteria 1484
150 Ga0495670_0035272 3300046691 Bacteria 2493
151 Ga0495670_0062468 3300046691 Bacteria 1874
152 Ga0495589_0060534 3300046794 Bacteria 1859
153 Ga0495600_0006440 3300046809 Bacteria 7151
154 Ga0495600_0070389 3300046809 Bacteria 2285
155 Ga0495600_0143374 3300046809 Bacteria 1549
156 Ga0495660_0000570 3300046810 Bacteria 29807
157 Ga0495660_0001436 3300046810 Bacteria 16320
158 Ga0495581_0001871 3300047315 Bacteria 11774
159 Ga0495581_0079979 3300047315 Bacteria 1891
160 Ga0495581_0241050 3300047315 Bacteria 1057
161 Ga0495604_0009563 3300047317 Bacteria 7668
162 Ga0495604_0021492 3300047317 Bacteria 5151
163 Ga0495636_0166399 3300047318 Bacteria 995
164 Ga0495674_0142657 3300047319 Bacteria 2013
165 Ga0495676_0003837 3300047321 Bacteria 13668
166 Ga0495676_0040036 3300047321 Bacteria 3872
167 Ga0495680_0009068 3300047322 Bacteria 8981
168 Ga0495680_0082890 3300047322 Bacteria 2419
169 Ga0495683_0005023 3300047323 Bacteria 7411
170 Ga0495687_014729 3300047443 Bacteria 4008
171 Ga0495677_0045611 3300047445 Bacteria 1608
172 Ga0495685_004561 3300047447 Bacteria 4486
173 Ga0495685_008981 3300047447 Bacteria 3332
174 Ga0495685_071277 3300047447 Bacteria 1163
175 Ga0495684_0057721 3300047471 Bacteria 2958
176 Ga0495686_0014092 3300047472 Bacteria 5518
177 Ga0495593_0140701 3300047673 Bacteria 1222
178 Ga0495614_0000354 3300048089 Bacteria 18301
179 Ga0495614_0054013 3300048089 Bacteria 1722
180 Ga0495626_0112504 3300048091 Bacteria 1177
181 Ga0496104_0050667 3300048907 Bacteria 3918
182 Ga0496105_0000311 3300048908 Bacteria 31946
183 Ga0496105_0132648 3300048908 Bacteria 2053
184 Ga0496108_0010685 3300048911 Bacteria 7449
185 Ga0496108_0078755 3300048911 Bacteria 2790
186 Ga0496109_0000449 3300048912 Bacteria 35266
187 Ga0496110_0006985 3300048913 Bacteria 8982
188 Ga0496111_0000133 3300048914 Bacteria 32723
189 Ga0496113_0076080 3300048916 Bacteria 2563
190 Ga0496114_0005760 3300048917 Bacteria 9728
191 Ga0496114_0081649 3300048917 Bacteria 2731
192 Ga0496114_0087387 3300048917 Bacteria 2643
193 Ga0496114_0218829 3300048917 Bacteria 1671
194 Ga0496115_0179077 3300048918 Bacteria 1753
195 Ga0496121_0014492 3300048924 Bacteria 8358
196 Ga0495682_0018614 3300049460 Bacteria 2616
197 Ga0501032_0002106 3300049569 Bacteria 15701
198 Ga0501032_0042708 3300049569 Bacteria 3074
199 Ga0501033_0001751 3300049570 Bacteria 19000
200 Ga0501034_0001946 3300049571 Bacteria 26168
201 Ga0501036_0001036 3300049572 Bacteria 20979
202 Ga0501036_0014001 3300049572 Bacteria 6666
203 Ga0501037_0000583 3300049573 Bacteria 28693
204 Ga0501037_0161245 3300049573 Bacteria 1598
205 Ga0501038_0007082 3300049574 Bacteria 10358
206 Ga0501038_0017056 3300049574 Bacteria 6568
207 Ga0501039_0009401 3300049575 Bacteria 7451
208 Ga0501040_0003664 3300049576 Bacteria 9951
209 Ga0501042_0026322 3300049578 Bacteria 4088
210 Ga0501043_0002709 3300049579 Bacteria 14837
211 Ga0501043_0060846 3300049579 Bacteria 2965
212 Ga0501043_0113234 3300049579 Bacteria 2130
213 Ga0501046_0001733 3300049580 Bacteria 20807
214 Ga0501046_0100488 3300049580 Bacteria 2219
215 Ga0501047_0003115 3300049581 Bacteria 15734
216 Ga0501047_0005782 3300049581 Bacteria 11646
217 Ga0501047_0010865 3300049581 Bacteria 8606
218 Ga0501047_0254275 3300049581 Bacteria 1605
219 Ga0501048_0004087 3300049582 Bacteria 11114
220 Ga0501067_0026969 3300049583 Bacteria 3181
221 Ga0501068_0007663 3300049584 Bacteria 5975
222 Ga0501069_0003069 3300049585 Bacteria 8556
223 Ga0501070_0005095 3300049586 Bacteria 11198
224 Ga0501071_0001130 3300049587 Bacteria 14911
225 Ga0501072_0000332 3300049588 Bacteria 33590
226 Ga0501073_0016085 3300049589 Bacteria 5423
227 Ga0501074_0014378 3300049590 Bacteria 5760
228 Ga0501076_0007436 3300049592 Bacteria 7974
229 Ga0501077_0002268 3300049593 Bacteria 11599
230 Ga0501079_0001534 3300049741 Bacteria 16336
231 Ga0501080_0023718 3300049742 Bacteria 5684
232 Ga0501080_0086964 3300049742 Bacteria 2904
233 Ga0501083_0000304 3300049744 Bacteria 30994
234 Ga0501035_0028760 3300049822 Bacteria 5071
235 Ga0501035_0073170 3300049822 Bacteria 3032
236 Ga0501035_0079639 3300049822 Bacteria 2893
237 Ga0501044_0002967 3300049823 Bacteria 19278
238 Ga0501044_0013267 3300049823 Bacteria 8920
239 Ga0501044_0014906 3300049823 Bacteria 8380
240 Ga0501044_0081408 3300049823 Bacteria 3278
241 Ga0501044_0130818 3300049823 Bacteria 2504
242 Ga0501045_0011037 3300049824 Bacteria 6332
243 Ga0501045_0214115 3300049824 Bacteria 1435
244 nmdc:mga00v17_8941_c1 3300050491 Bacteria 5404
245 Ga0495612_0067232 3300053078 Bacteria 1490
246 Ga0495612_0071600 3300053078 Bacteria 1446
247 Ga0495619_0011098 3300053085 Bacteria 5665
248 Ga0500560_000373 3300053107 Bacteria 5957
249 Ga0500616_0007310 3300053153 Bacteria 7044
250 Ga0501084_0167644 3300054114 Bacteria 1853
251 Ga0501082_0001940 3300060353 Bacteria 18203
252 Ga0466962_0000138 3300061719 Bacteria 29768
253 Ga0466962_0002222 3300061719 Bacteria 9177
254 Ga0466962_0007904 3300061719 Bacteria 5099
255 Ga0530510_0041368 3300061734 Bacteria 3327
256 8008489967 8008485437 Bacteria 7198341
257 2554260495 2554235005 Bacteria 6457341
258 2585298720 2582581312 Bacteria 7308206
259 2616699795 2616644814 Bacteria 11555299
260 2616902477 2616644941 Bacteria 8510691
261 2643761855 2643221548 Bacteria 8053412
262 2643904065 2643221578 Bacteria 9213798
263 2643943275 2643221587 Bacteria 7586415
264 2644388256 2643221670 Bacteria 6497041
265 2644402420 2643221673 Bacteria 9196637
266 2644430743 2643221677 Bacteria 7584031
267 2644460718 2643221682 Bacteria 6743283
268 2768646213 2767802112 Bacteria 6465194
269 2785340429 2784746763 Bacteria 9783172
270 2793978325 2791355406 Bacteria 11364898
271 2804848674 2802429296 Bacteria 7227771
272 2808840768 2808606359 Bacteria 9866990
273 2811843749 2808606982 Bacteria 7791042
274 2812478202 2811994917 Bacteria 7761064
275 2857511977 2857509624 Bacteria 7472071
276 2862182433 2862178590 Bacteria 8583590
277 2862291898 2862290372 Bacteria 7471434
278 2862295395 2862290372 Bacteria 7471434
279 2862576721 2862574272 Bacteria 10567477
280 2862709420 2862705112 Bacteria 6563286
281 2867353049 2867346516 Bacteria 7608576
282 2867374499 2867369537 Bacteria 6501581
283 2867375072 2867369537 Bacteria 6501581
284 2867476544 2867475112 Bacteria 6909112
285 2873153343 2873151551 Bacteria 8625867
286 2875397448 2875391855 Bacteria 7600475
287 2875397584 2875391855 Bacteria 7600475
288 2884995645 2884994152 Bacteria 4492978
289 2899806653 2899803654 Bacteria 5577784
290 2912721121 2912715099 Bacteria 9460473
291 2912763670 2912757875 Bacteria 7940295
292 2918507267 2918501144 Bacteria 8668083
293 2919450466 2919446982 Bacteria 3994487
294 2946047060 2946045630 Bacteria 8527308
295 2990049148 2990044586 Bacteria 6603797
296 2990093733 2990088156 Bacteria 6657676
297 2995464523 2995463766 Bacteria 8577691
298 2997459430 2997451912 Bacteria 8492419
299 3006327160 3006321560 Bacteria 8247479
300 3006430155 3006425503 Bacteria 6491253
301 3006493748 3006486233 Bacteria 8157040
302 8025417647 8025413630 Bacteria 7014048
303 8025529300 8025524527 Bacteria 7197316
304 8025532852 8025530807 Bacteria 8495698
305 8025537591 8025530807 Bacteria 8495698
306 8033687667 8033684223 Bacteria 6906479
307 8047895443 8047893842 Bacteria 11723082
308 8048132477 8048127548 Bacteria 11053136
309 8048363511 8048356638 Bacteria 11044339
310 8048372468 8048369669 Bacteria 11666822
311 8048381402 8048379754 Bacteria 11877923
312 8054163089 8054160619 Bacteria 7783213
313 8056667125 8056667051 Bacteria 6953971
314 Ga0007423J48922_100554
315 JGI25160J50197_1013416
316 JGI25160J50197_1023055
317 Ga0070658_10167320
318 Ga0070682_100207403
319 Ga0070671_100000399
320 Ga0070714_100019064
321 Ga0070665_100067957
322 Ga0070665_100103566
323 Ga0068855_100015969
324 Ga0068858_100085034
325 Ga0068858_100423825
326 Ga0075364_10006293
327 Ga0075364_10030759
328 Ga0105238_10488329
329 Ga0157370_10008319
330 Ga0157370_10053955
331 Ga0157372_10000103
332 Ga0157375_10363950
333 Ga0157375_10474561
334 Ga0157376_10280949
335 Ga0197907_10051208
336 Ga0206356_11718079
337 Ga0206353_10548595
338 Ga0206353_10618931
339 Ga0213872_10019119
340 Ga0213872_10091713
341 Ga0213872_10095739
342 Ga0213875_10033835
343 Ga0224712_10022350
344 Ga0207426_1001177
345 Ga0207426_1014513
346 Ga0207705_10099953
347 Ga0207649_10121416
348 Ga0207681_10007300
349 Ga0207694_10227701
350 Ga0207664_10018097
351 Ga0207664_10061590
352 Ga0207644_10001153
353 Ga0207667_10029600
354 Ga0207703_10065647
355 Ga0207639_10069557
356 Ga0268266_10050975
357 Ga0268266_10269852
358 Ga0307511_10102550
359 Ga0307511_10167316
360 Ga0307509_10043043
361 Ga0265313_10008334
362 Ga0307508_10015847
363 Ga0307516_10320119
364 Ga0307410_10069208
365 Ga0307416_100045296
366 Ga0307510_10211395
367 Ga0436364_0369741
368 Ga0395901_0143121
369 Ga0395901_0169583
370 Ga0436361_0563024
371 Ga0436361_0658394
372 Ga0436361_1114604
373 Ga0436363_1340494
374 Ga0439436_0000749
375 Ga0439457_000009
376 Ga0439462_0045532
377 Ga0450898_006112
378 Ga0450903_009431
379 Ga0466969_0000484
380 Ga0466969_0061519
381 Ga0466969_0067026
382 Ga0466972_0026233
383 Ga0466966_0012279
384 Ga0466966_0014144
385 Ga0466966_0018605
386 Ga0466966_0232280
387 Ga0466961_0002230
388 Ga0466961_0029518
389 Ga0466971_0000817
390 Ga0466971_0003353
391 Ga0466968_0020835
392 Ga0466959_0018787
393 Ga0466959_0038349
394 Ga0466958_0004142
395 Ga0466958_0009096
396 Ga0466958_0200614
397 Ga0466967_0316992
398 Ga0466967_0325802
399 Ga0495617_024776
400 Ga0495592_0000516
401 Ga0495592_0005101
402 Ga0495603_0013267
403 Ga0495603_0033943
404 Ga0495629_0000865
405 Ga0495629_0000982
406 Ga0495629_0011955
407 Ga0495629_0039054
408 Ga0495629_0107880
409 Ga0495629_0110164
410 Ga0495651_0004413
411 Ga0495580_0222723
412 Ga0495582_0000745
413 Ga0495582_0156603
414 Ga0495605_0007353
415 Ga0495662_0001632
416 Ga0495664_0028333
417 Ga0495585_0000327
418 Ga0495585_0052976
419 Ga0495594_0000910
420 Ga0495594_0018444
421 Ga0495594_0023413
422 Ga0495594_0043226
423 Ga0495607_0039171
424 Ga0495583_0031820
425 Ga0495610_0032612
426 Ga0495616_0016281
427 Ga0495618_0012164
428 Ga0495618_0064495
429 Ga0495620_0047070
430 Ga0495628_0015506
431 Ga0495628_0020537
432 Ga0495637_0025345
433 Ga0495643_0005569
434 Ga0495643_0097194
435 Ga0495648_0063568
436 Ga0495652_0008753
437 Ga0495640_0079705
438 Ga0495609_0023854
439 Ga0495645_0017105
440 Ga0495645_0350321
441 Ga0495667_0049301
442 Ga0495668_0117103
443 Ga0495634_0049764
444 Ga0495634_0052083
445 Ga0495611_0001810
446 Ga0495611_0010340
447 Ga0495611_0017160
448 Ga0495625_0038552
449 Ga0495635_0013327
450 Ga0495635_0070461
451 Ga0495635_0089560
452 Ga0495661_0028891
453 Ga0495588_0003939
454 Ga0495588_0015381
455 Ga0495657_0014567
456 Ga0495599_0052608
457 Ga0495623_0021961
458 Ga0495646_0194087
459 Ga0495613_0000824
460 Ga0495613_0001044
461 Ga0495613_0002824
462 Ga0495613_0182809
463 Ga0495670_0035272
464 Ga0495670_0062468
465 Ga0495589_0060534
466 Ga0495600_0006440
467 Ga0495600_0070389
468 Ga0495600_0143374
469 Ga0495660_0000570
470 Ga0495660_0001436
471 Ga0495581_0001871
472 Ga0495581_0079979
473 Ga0495581_0241050
474 Ga0495604_0009563
475 Ga0495604_0021492
476 Ga0495636_0166399
477 Ga0495674_0142657
478 Ga0495676_0003837
479 Ga0495676_0040036
480 Ga0495680_0009068
481 Ga0495680_0082890
482 Ga0495683_0005023
483 Ga0495687_014729
484 Ga0495677_0045611
485 Ga0495685_004561
486 Ga0495685_008981
487 Ga0495685_071277
488 Ga0495684_0057721
489 Ga0495686_0014092
490 Ga0495593_0140701
491 Ga0495614_0000354
492 Ga0495614_0054013
493 Ga0495626_0112504
494 Ga0496104_0050667
495 Ga0496105_0000311
496 Ga0496105_0132648
497 Ga0496108_0010685
498 Ga0496108_0078755
499 Ga0496109_0000449
500 Ga0496110_0006985
501 Ga0496111_0000133
502 Ga0496113_0076080
503 Ga0496114_0005760
504 Ga0496114_0081649
505 Ga0496114_0087387
506 Ga0496114_0218829
507 Ga0496115_0179077
508 Ga0496121_0014492
509 Ga0495682_0018614
510 Ga0501032_0002106
511 Ga0501032_0042708
512 Ga0501033_0001751
513 Ga0501034_0001946
514 Ga0501036_0001036
515 Ga0501036_0014001
516 Ga0501037_0000583
517 Ga0501037_0161245
518 Ga0501038_0007082
519 Ga0501038_0017056
520 Ga0501039_0009401
521 Ga0501040_0003664
522 Ga0501042_0026322
523 Ga0501043_0002709
524 Ga0501043_0060846
525 Ga0501043_0113234
526 Ga0501046_0001733
527 Ga0501046_0100488
528 Ga0501047_0003115
529 Ga0501047_0005782
530 Ga0501047_0010865
531 Ga0501047_0254275
532 Ga0501048_0004087
533 Ga0501067_0026969
534 Ga0501068_0007663
535 Ga0501069_0003069
536 Ga0501070_0005095
537 Ga0501071_0001130
538 Ga0501072_0000332
539 Ga0501073_0016085
540 Ga0501074_0014378
541 Ga0501076_0007436
542 Ga0501077_0002268
543 Ga0501079_0001534
544 Ga0501080_0023718
545 Ga0501080_0086964
546 Ga0501083_0000304
547 Ga0501035_0028760
548 Ga0501035_0073170
549 Ga0501035_0079639
550 Ga0501044_0002967
551 Ga0501044_0013267
552 Ga0501044_0014906
553 Ga0501044_0081408
554 Ga0501044_0130818
555 Ga0501045_0011037
556 Ga0501045_0214115
557 nmdc:mga00v17_8941_c1
558 Ga0495612_0067232
559 Ga0495612_0071600
560 Ga0495619_0011098
561 Ga0500560_000373
562 Ga0500616_0007310
563 Ga0501084_0167644
564 Ga0501082_0001940
565 Ga0466962_0000138
566 Ga0466962_0002222
567 Ga0466962_0007904
568 Ga0530510_0041368
569 8008489967
570 2554260495
571 2585298720
572 2616699795
573 2616902477
574 2643761855
575 2643904065
576 2643943275
577 2644388256
578 2644402420
579 2644430743
580 2644460718
581 2768646213
582 2785340429
583 2793978325
584 2804848674
585 2808840768
586 2811843749
587 2812478202
588 2857511977
589 2862182433
590 2862291898
591 2862295395
592 2862576721
593 2862709420
594 2867353049
595 2867374499
596 2867375072
597 2867476544
598 2873153343
599 2875397448
600 2875397584
601 2884995645
602 2899806653
603 2912721121
604 2912763670
605 2918507267
606 2919450466
607 2946047060
608 2990049148
609 2990093733
610 2995464523
611 2997459430
612 3006327160
613 3006430155
614 3006493748
615 8025417647
616 8025529300
617 8025532852
618 8025537591
619 8033687667
620 8047895443
621 8048132477
622 8048363511
623 8048372468
624 8048381402
625 8054163089
626 8056667125

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01507

PAPS_reduct

Phosphoadenosine phosphosulfate reductase family

62

287

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zun-assembly1.cif.gz_A crystal structure of a gtp-regulated atp sulfurylase heterodimer from pseudomonas syringae 0.8778 15 219
1zun-assembly1.cif.gz_A crystal structure of a gtp-regulated atp sulfurylase heterodimer from pseudomonas syringae 0.8293 15 219
4bwv-assembly1.cif.gz_B structure of adenosine 5-prime-phosphosulfate reductase apr-b from physcomitrella patens 0.7997 18 216
3g59-assembly1.cif.gz_A crystal structure of candida glabrata fmn adenylyltransferase in complex with atp 0.7984 17 216
3fwk-assembly1.cif.gz_A crystal structure of candida glabrata fmn adenylyltransferase 0.7441 17 216
ID Description Score Start End Superfamily
1zunA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8776 16 219 3.40.50.620
1zunA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8732 16 219 3.40.50.620
af_Q9VJY1_8_244_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8256 17 216 3.40.50.620
af_A4I3B1_2_215_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8092 17 216 3.40.50.620
4bwvB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.7997 18 216 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A382WX81-F1-model_v4 Phosphoadenosine phosphosulphate reductase domain-containing protein 0.9955 19 98 GO:0003824
AF-A0A4Q3J4F7-F1-model_v4 Sulfate adenylyltransferase small subunit (EC 2.7.7.4) 0.9925 18 100 GO:0004781
AF-A0A3D3BSU9-F1-model_v4 Sulfate adenylyltransferase small subunit (EC 2.7.7.4) 0.9886 18 96 GO:0004781
AF-A0A640W6R9-F1-model_v4 Phosphoadenosine phosphosulfate reductase family protein 0.988 18 97 GO:0003824
AF-A0A2N7TN89-F1-model_v4 Sulfate adenylyltransferase small subunit 0.9856 15 100 GO:0016779

Map