F402163

General Info

Members Datasets Scaffolds Average Seq Length
313 202 269 190

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10405455|Ga0105248_104054551
Length 208
Sequence MSVRHGLLALLERGTRYGYQLRVEFEQTMGGTWPLNIGQVYTTLARLERDGLVRALPESDRAETSAGRHTTGQRPYEITPDGRAELALWFTSPVEHSDRPRDELAIKLALALTTPGVDVRAVVQNQRTATVRHLQELTRLKTTSNDDSDLAWRLVLESMVFRAEAEVRWLDHCESSLARFRPSTMDGATHTSTVDTFETVHTETWGSR

Samples

Sample ID Description Type Environment
1 2501939600 Micromonospora sp. L5 Isolate Unclassified
2 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
3 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
4 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
5 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
6 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
7 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
8 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
9 2855683550 Micromonospora sp. RP3T Isolate Unclassified
10 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
11 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
12 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
13 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
14 2858868258 Micromonospora sp. MH33 Isolate Unclassified
15 2858882152 Micromonospora noduli MED15 Isolate Nodule
16 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
17 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
18 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
19 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
20 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
21 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
22 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
23 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
24 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
25 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
26 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
27 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
28 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
29 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
30 2891562705 Microbispora tritici MT50 Isolate Unclassified
31 2902582711 Micromonospora sp. AP08 Isolate Unclassified
32 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
33 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
34 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
35 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
37 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
38 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
39 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
40 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
41 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
42 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
43 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
44 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
45 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
46 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
47 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
48 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
49 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
50 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
51 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
52 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
53 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
54 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
55 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
56 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
57 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
58 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
59 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
60 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
61 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
62 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
63 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
64 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
65 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
66 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
67 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
68 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
69 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
70 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
71 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
72 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
73 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
74 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
75 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
76 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
77 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
78 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
79 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
80 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
81 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
82 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
83 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
84 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
85 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
86 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
87 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
88 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
89 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
90 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
91 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
92 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
93 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
124 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
126 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
127 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
128 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
129 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
130 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
131 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
132 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
133 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
134 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
135 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
136 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
137 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
138 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
139 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
140 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
141 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
142 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
143 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
144 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
145 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
146 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
147 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
148 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
149 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
150 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
151 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
152 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
153 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
154 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
155 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
156 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
157 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
158 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
159 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
160 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
161 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
162 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
163 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
164 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
165 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
166 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
167 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
168 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
169 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
170 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
171 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
175 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
178 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
179 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
180 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
181 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
182 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
183 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
184 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
185 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
186 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
187 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
188 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
189 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
190 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
191 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
192 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
193 649633069 Micromonospora sp. L5 Isolate Unclassified
194 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
195 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
196 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
197 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
198 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
199 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
200 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
201 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
202 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.94
Metatranscriptomes 0
Isolates 14.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.56
Nodule 1.92
Rhizoplane 5.11
Rhizosphere 76.36
Stem 0
Stem Tuber 0
Unclassified 14.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10002690 3300003203 Bacteria 8376
2 rootH1_10081312 3300003316 Bacteria 3471
3 JGI25407J50210_10015008 3300003373 Bacteria 2000
4 JGI25407J50210_10019790 3300003373 Bacteria 1750
5 JGI25407J50210_10048547 3300003373 Bacteria 1077
6 Ga0070676_10230707 3300005328 Bacteria 1227
7 Ga0070683_100006110 3300005329 Bacteria 10095
8 Ga0070683_100468927 3300005329 Bacteria 1202
9 Ga0070670_100232909 3300005331 Bacteria 1603
10 Ga0068869_100064993 3300005334 Bacteria 2685
11 Ga0070680_100171859 3300005336 Bacteria 1824
12 Ga0068868_100030636 3300005338 Bacteria 4125
13 Ga0070689_101311170 3300005340 Bacteria 652
14 Ga0070661_100037515 3300005344 Bacteria 3526
15 Ga0070675_100001692 3300005354 Bacteria 16281
16 Ga0070674_100278976 3300005356 Bacteria 1324
17 Ga0070659_100034903 3300005366 Bacteria 3914
18 Ga0070713_100218273 3300005436 Bacteria 1729
19 Ga0070700_100021719 3300005441 Bacteria 3734
20 Ga0070663_100013176 3300005455 Bacteria 5259
21 Ga0070678_100154843 3300005456 Bacteria 1850
22 Ga0070662_100013555 3300005457 Bacteria 5427
23 Ga0070662_100084073 3300005457 Bacteria 2377
24 Ga0068855_100330082 3300005563 Bacteria 1684
25 Ga0068855_100888838 3300005563 Bacteria 942
26 Ga0070664_100001631 3300005564 Bacteria 17957
27 Ga0070664_100168457 3300005564 Bacteria 1942
28 Ga0070664_100169063 3300005564 Bacteria 1939
29 Ga0068857_100008158 3300005577 Bacteria 9043
30 Ga0068857_100396279 3300005577 Bacteria 1284
31 Ga0068852_100147203 3300005616 Bacteria 2186
32 Ga0068859_101850541 3300005617 Bacteria 667
33 Ga0068864_100023547 3300005618 Bacteria 5172
34 Ga0068864_100404361 3300005618 Bacteria 1298
35 Ga0068861_100058638 3300005719 Bacteria 2945
36 Ga0068861_100905869 3300005719 Bacteria 835
37 Ga0068863_100017401 3300005841 Bacteria 6892
38 Ga0068863_100147517 3300005841 Bacteria 2250
39 Ga0068858_100050086 3300005842 Bacteria 3865
40 Ga0081538_10001586 3300005981 Bacteria 23317
41 Ga0081538_10001666 3300005981 Bacteria 22696
42 Ga0081538_10009983 3300005981 Bacteria 7834
43 Ga0081538_10027135 3300005981 Bacteria 3980
44 Ga0081538_10035074 3300005981 Bacteria 3303
45 Ga0081538_10039939 3300005981 Bacteria 3001
46 Ga0081540_1107545 3300005983 Bacteria 1187
47 Ga0081539_10000420 3300005985 Bacteria 90166
48 Ga0081539_10004771 3300005985 Bacteria 14626
49 Ga0081539_10090832 3300005985 Bacteria 1579
50 Ga0081539_10153570 3300005985 Bacteria 1105
51 Ga0075432_10050578 3300006058 Bacteria 1466
52 Ga0070716_100062361 3300006173 Bacteria 2161
53 Ga0070712_100434657 3300006175 Bacteria 1090
54 Ga0075427_10001269 3300006194 Bacteria 3221
55 Ga0075428_100000410 3300006844 Bacteria 42619
56 Ga0075428_100005568 3300006844 Bacteria 13997
57 Ga0075428_100013977 3300006844 Bacteria 8937
58 Ga0075428_100145896 3300006844 Bacteria 2572
59 Ga0075428_100323941 3300006844 Bacteria 1656
60 Ga0075428_100596546 3300006844 Bacteria 1180
61 Ga0075430_100003046 3300006846 Bacteria 14015
62 Ga0075430_100005863 3300006846 Bacteria 10368
63 Ga0075430_100021794 3300006846 Bacteria 5446
64 Ga0075430_100103583 3300006846 Bacteria 2376
65 Ga0075431_100002781 3300006847 Bacteria 16939
66 Ga0075431_100129213 3300006847 Bacteria 2607
67 Ga0075431_101114858 3300006847 Bacteria 753
68 Ga0075433_10048815 3300006852 Bacteria 3681
69 Ga0075434_100014598 3300006871 Bacteria 7513
70 Ga0075429_100005553 3300006880 Bacteria 10865
71 Ga0075429_100007537 3300006880 Bacteria 9448
72 Ga0075429_100020182 3300006880 Bacteria 5778
73 Ga0075429_100379926 3300006880 Bacteria 1237
74 Ga0075429_100538173 3300006880 Bacteria 1023
75 Ga0068865_100323496 3300006881 Bacteria 1241
76 Ga0097620_101850748 3300006931 Bacteria 667
77 Ga0105240_10223379 3300009093 Bacteria 2193
78 Ga0111539_10095573 3300009094 Bacteria 3490
79 Ga0111539_10136563 3300009094 Bacteria 2872
80 Ga0111539_10586327 3300009094 Bacteria 1298
81 Ga0111539_11019491 3300009094 Bacteria 962
82 Ga0105245_10095148 3300009098 Bacteria 2747
83 Ga0105245_10433941 3300009098 Bacteria 1319
84 Ga0114129_10000074 3300009147 Bacteria 92340
85 Ga0114129_10046795 3300009147 Bacteria 6079
86 Ga0114129_10071615 3300009147 Bacteria 4834
87 Ga0114129_10356251 3300009147 Bacteria 1937
88 Ga0114129_10476198 3300009147 Bacteria 1634
89 Ga0114129_10544289 3300009147 Bacteria 1510
90 Ga0114129_10675665 3300009147 Bacteria 1330
91 Ga0114129_10980305 3300009147 Bacteria 1066
92 Ga0114129_11021265 3300009147 Bacteria 1040
93 Ga0114129_11270139 3300009147 Bacteria 914
94 Ga0105248_10086978 3300009177 Bacteria 3517
95 Ga0105248_10181162 3300009177 Bacteria 2374
96 Ga0105248_10270172 3300009177 Bacteria 1915
97 Ga0105248_10405455 3300009177 Bacteria 1535
98 Ga0105238_11225423 3300009551 Bacteria 775
99 Ga0105249_10355583 3300009553 Bacteria 1485
100 Ga0105249_11512273 3300009553 Bacteria 744
101 Ga0105239_10179398 3300010375 Bacteria 2369
102 Ga0105239_10545468 3300010375 Bacteria 1320
103 Ga0105239_10663291 3300010375 Bacteria 1192
104 Ga0105239_10875933 3300010375 Bacteria 1030
105 Ga0105246_10429066 3300011119 Bacteria 1105
106 Ga0157375_11485335 3300013308 Bacteria 800
107 Ga0163163_10033491 3300014325 Bacteria 4971
108 Ga0163163_10738302 3300014325 Bacteria 1048
109 Ga0157380_10739731 3300014326 Bacteria 993
110 Ga0157380_11158385 3300014326 Bacteria 815
111 Ga0157377_10006784 3300014745 Bacteria 5485
112 Ga0157379_10019050 3300014968 Bacteria 6059
113 Ga0163161_10135939 3300017792 Bacteria 1858
114 Ga0207688_10159344 3300025901 Bacteria 1337
115 Ga0207645_10108249 3300025907 Bacteria 1798
116 Ga0207643_10129983 3300025908 Bacteria 1498
117 Ga0207643_10428757 3300025908 Bacteria 839
118 Ga0207693_10165005 3300025915 Bacteria 1743
119 Ga0207652_10008931 3300025921 Bacteria 8075
120 Ga0207681_10037496 3300025923 Bacteria 3205
121 Ga0207650_10199425 3300025925 Bacteria 1602
122 Ga0207659_10007966 3300025926 Bacteria 6549
123 Ga0207687_10186522 3300025927 Bacteria 1611
124 Ga0207690_10057799 3300025932 Bacteria 2622
125 Ga0207706_10013402 3300025933 Bacteria 7455
126 Ga0207706_10206606 3300025933 Bacteria 1722
127 Ga0207665_10311603 3300025939 Bacteria 1179
128 Ga0207711_10174227 3300025941 Bacteria 1954
129 Ga0207689_10003715 3300025942 Bacteria 13912
130 Ga0207689_10130974 3300025942 Bacteria 2064
131 Ga0207661_10032794 3300025944 Bacteria 4028
132 Ga0207661_10365037 3300025944 Bacteria 1305
133 Ga0207679_10173560 3300025945 Bacteria 1777
134 Ga0207667_10244029 3300025949 Bacteria 1838
135 Ga0207668_10039798 3300025972 Bacteria 3168
136 Ga0207640_10082405 3300025981 Bacteria 2203
137 Ga0207677_10006644 3300026023 Bacteria 6347
138 Ga0207703_10110609 3300026035 Bacteria 2344
139 Ga0207703_10130007 3300026035 Bacteria 2173
140 Ga0207678_10008393 3300026067 Bacteria 9113
141 Ga0207678_11356811 3300026067 Bacteria 629
142 Ga0207708_10032529 3300026075 Bacteria 3960
143 Ga0207641_10025364 3300026088 Bacteria 4888
144 Ga0207641_10035190 3300026088 Bacteria 4171
145 Ga0207648_10176705 3300026089 Bacteria 1888
146 Ga0207676_10019504 3300026095 Bacteria 4949
147 Ga0207676_10361549 3300026095 Bacteria 1345
148 Ga0207674_10004071 3300026116 Bacteria 17712
149 Ga0207674_10076301 3300026116 Bacteria 3360
150 Ga0207675_100016617 3300026118 Bacteria 6873
151 Ga0207675_100073447 3300026118 Bacteria 3201
152 Ga0207683_10100863 3300026121 Bacteria 2577
153 Ga0207698_10354303 3300026142 Bacteria 1387
154 Ga0207428_10012705 3300027907 Bacteria 7384
155 Ga0268266_10235935 3300028379 Bacteria 1686
156 Ga0307517_10133388 3300028786 Bacteria 1777
157 Ga0307515_10000042 3300028794 Bacteria 309141
158 Ga0307515_10004496 3300028794 Bacteria 28853
159 Ga0307515_10040622 3300028794 Bacteria 7349
160 Ga0307515_10081768 3300028794 Bacteria 4190
161 Ga0307515_10158666 3300028794 Bacteria 2319
162 Ga0307515_10302562 3300028794 Bacteria 1283
163 Ga0307513_10025499 3300031456 Bacteria 6847
164 Ga0307513_10296733 3300031456 Bacteria 1385
165 Ga0307508_10027727 3300031616 Bacteria 5126
166 Ga0307405_10000800 3300031731 Bacteria 12357
167 Ga0307413_10028988 3300031824 Bacteria 3091
168 Ga0307413_10214375 3300031824 Bacteria 1401
169 Ga0307406_10003920 3300031901 Bacteria 8088
170 Ga0307409_100001212 3300031995 Bacteria 12399
171 Ga0307409_100508243 3300031995 Bacteria 1175
172 Ga0307409_100587564 3300031995 Bacteria 1099
173 Ga0307416_100011144 3300032002 Bacteria 5980
174 Ga0307416_101530206 3300032002 Bacteria 773
175 Ga0307415_100001049 3300032126 Bacteria 12821
176 Ga0307415_100014043 3300032126 Bacteria 4694
177 Ga0307415_100016503 3300032126 Bacteria 4406
178 Ga0307415_100088512 3300032126 Bacteria 2234
179 Ga0373946_0020036 3300035171 Bacteria 2582
180 Ga0373955_0180310 3300035172 Bacteria 1253
181 Ga0373942_0054937 3300035207 Bacteria 1126
182 Ga0373935_0040899 3300035692 Bacteria 2911
183 Ga0395899_0245592 3300037312 Bacteria 1230
184 Ga0395899_0280283 3300037312 Bacteria 1134
185 Ga0395900_0307307 3300037418 Bacteria 1570
186 Ga0395900_1172260 3300037418 Bacteria 684
187 Ga0395898_0317895 3300037466 Bacteria 1485
188 Ga0395898_0360871 3300037466 Bacteria 1385
189 Ga0395905_0061276 3300037471 Bacteria 3519
190 Ga0395905_0079714 3300037471 Bacteria 3069
191 Ga0395901_0006447 3300038443 Bacteria 11889
192 Ga0395901_0132194 3300038443 Bacteria 2622
193 Ga0395901_0285482 3300038443 Bacteria 1714
194 Ga0439450_014548 3300042008 Bacteria 1597
195 Ga0439454_007808 3300042011 Bacteria 1350
196 Ga0439463_018134 3300042016 Bacteria 1750
197 Ga0439435_0050978 3300042436 Bacteria 1185
198 Ga0439444_0011398 3300042437 Bacteria 1439
199 Ga0439464_0014678 3300042439 Bacteria 2108
200 Ga0466972_0141345 3300044658 Bacteria 1133
201 Ga0466965_0321009 3300044683 Bacteria 843
202 Ga0466963_0256296 3300044694 Bacteria 1228
203 Ga0466968_0016123 3300044735 Bacteria 2971
204 Ga0466967_0051904 3300045976 Bacteria 3597
205 Ga0466967_0779871 3300045976 Bacteria 949
206 Ga0495629_0022922 3300046459 Bacteria 4450
207 Ga0495629_0158197 3300046459 Bacteria 1574
208 Ga0495630_0070501 3300046517 Bacteria 2630
209 Ga0495656_0066058 3300046615 Bacteria 1592
210 Ga0495611_0182277 3300046648 Bacteria 981
211 Ga0495674_0281575 3300047319 Bacteria 1362
212 Ga0495593_0315515 3300047673 Bacteria 782
213 Ga0496104_0184229 3300048907 Bacteria 1998
214 Ga0496104_0298790 3300048907 Bacteria 1522
215 Ga0496105_0067382 3300048908 Bacteria 2955
216 Ga0496106_0632277 3300048909 Bacteria 856
217 Ga0496108_0027599 3300048911 Bacteria 4691
218 Ga0496108_0532289 3300048911 Bacteria 1026
219 Ga0496109_0008121 3300048912 Bacteria 8899
220 Ga0496110_0034704 3300048913 Bacteria 4372
221 Ga0496110_0859425 3300048913 Bacteria 813
222 Ga0496111_0058192 3300048914 Bacteria 2798
223 Ga0496112_0007784 3300048915 Bacteria 9537
224 Ga0496112_0143827 3300048915 Bacteria 2353
225 Ga0496112_0258765 3300048915 Bacteria 1690
226 Ga0496112_0317486 3300048915 Bacteria 1502
227 Ga0496112_1037438 3300048915 Bacteria 739
228 Ga0496113_0005629 3300048916 Bacteria 7839
229 Ga0496126_0072145 3300048929 Bacteria 3072
230 Ga0496126_0683151 3300048929 Bacteria 800
231 Ga0501040_0120330 3300049576 Bacteria 1842
232 Ga0501046_0167336 3300049580 Bacteria 1651
233 Ga0501047_0002938 3300049581 Bacteria 16177
234 Ga0501068_0396035 3300049584 Bacteria 890
235 nmdc:mga00v17_165612_c2 3300050491 Bacteria 1125
236 nmdc:mga05p37_10842_c1 3300050507 Bacteria 10820
237 nmdc:mga05p37_1222404_c1 3300050507 Bacteria 774
238 nmdc:mga05p37_188148_c1 3300050507 Bacteria 2509
239 nmdc:mga05p37_289137_c1 3300050507 Bacteria 1951
240 nmdc:mga05p37_339938_c1 3300050507 Bacteria 1770
241 nmdc:mga05p37_379723_c1 3300050507 Bacteria 1656
242 nmdc:mga05p37_420_c1 3300050507 Bacteria 45931
243 nmdc:mga05p37_460713_c1 3300050507 Bacteria 1469
244 nmdc:mga05p37_51081_c1 3300050507 Bacteria 5086
245 nmdc:mga09592_13_c1 3300050508 Bacteria 101979
246 nmdc:mga09592_15384_c1 3300050508 Bacteria 6249
247 nmdc:mga09592_347606_c1 3300050508 Bacteria 1283
248 nmdc:mga0qj67_17873_c1 3300050509 Bacteria 5397
249 nmdc:mga0qj67_5786_c1 3300050509 Bacteria 9048
250 nmdc:mga0qj67_79_c2 3300050509 Bacteria 27322
251 nmdc:mga06r32_174761_c1 3300050510 Bacteria 2132
252 nmdc:mga06r32_433799_c1 3300050510 Bacteria 1295
253 nmdc:mga06r32_839_c1 3300050510 Bacteria 27208
254 nmdc:mga08y16_353245_c1 3300050511 Bacteria 1510
255 nmdc:mga0n895_1158355_c1 3300050512 Bacteria 748
256 nmdc:mga0n895_13615_c1 3300050512 Bacteria 7349
257 nmdc:mga0rr50_675730_c1 3300050513 Bacteria 881
258 nmdc:mga0a205_24025_c1 3300050515 Bacteria 5788
259 nmdc:mga0a205_4046_c1 3300050515 Bacteria 5359
260 nmdc:mga0a205_763387_c1 3300050515 Bacteria 815
261 Ga0500644_0036305 3300053088 Bacteria 1603
262 Ga0500646_0000037 3300053090 Bacteria 37584
263 Ga0500583_0007834 3300053092 Bacteria 3789
264 Ga0500641_0092878 3300053096 Bacteria 1289
265 Ga0500579_077136 3300053143 Bacteria 1887
266 Ga0500588_0016919 3300053146 Bacteria 1894
267 Ga0500604_0092570 3300053151 Bacteria 989
268 Ga0590074_029978 3300059423 Bacteria 959
269 Ga0530510_0150181 3300061734 Bacteria 1720

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300026067 Ga0207678_11356811 Ga0207678_113568111 140
2 3300049584 Ga0501068_0396035 Ga0501068_0396035_91_579 157
3 3300006058 Ga0075432_10050578 Ga0075432_100505783 160
4 3300027907 Ga0207428_10012705 Ga0207428_100127051 160
5 iso_pu_bacteria 8003856774 8003861905 161
6 3300009147 Ga0114129_10476198 Ga0114129_104761982 164
7 3300050507 nmdc:mga05p37_379723_c1 nmdc:mga05p37_379723_c1_1023_1565 164
8 3300009553 Ga0105249_11512273 Ga0105249_115122732 166
9 3300014326 Ga0157380_11158385 Ga0157380_111583852 166
10 3300048929 Ga0496126_0683151 Ga0496126_0683151_44_559 166
11 3300006194 Ga0075427_10001269 Ga0075427_100012694 167
12 3300009551 Ga0105238_11225423 Ga0105238_112254232 168
13 3300028794 Ga0307515_10000042 Ga0307515_10000042271 170
14 3300028794 Ga0307515_10081768 Ga0307515_100817684 170
15 3300028794 Ga0307515_10302562 Ga0307515_103025622 170
16 iso_pu_bacteria 2622736626 2623587278 170
17 3300048915 Ga0496112_1037438 Ga0496112_1037438_61_648 172
18 3300028794 Ga0307515_10004496 Ga0307515_1000449617 173
19 3300031616 Ga0307508_10027727 Ga0307508_100277273 173
20 3300031995 Ga0307409_100587564 Ga0307409_1005875642 173
21 3300044683 Ga0466965_0321009 Ga0466965_0321009_18_542 173
22 3300005577 Ga0068857_100396279 Ga0068857_1003962791 174
23 iso_pu_bacteria 2856741275 2856745315 174
24 iso_pu_bacteria 2891562705 2891567229 174
25 3300006844 Ga0075428_100005568 Ga0075428_1000055683 175
26 3300006846 Ga0075430_100005863 Ga0075430_1000058636 175
27 3300006846 Ga0075430_100103583 Ga0075430_1001035833 175
28 3300009094 Ga0111539_10095573 Ga0111539_100955732 175
29 3300048929 Ga0496126_0072145 Ga0496126_0072145_819_1346 175
30 3300050507 nmdc:mga05p37_188148_c1 nmdc:mga05p37_188148_c1_1612_2196 175
31 3300050509 nmdc:mga0qj67_5786_c1 nmdc:mga0qj67_5786_c1_1632_2216 175
32 3300050510 nmdc:mga06r32_433799_c1 nmdc:mga06r32_433799_c1_409_993 175
33 3300050515 nmdc:mga0a205_4046_c1 nmdc:mga0a205_4046_c1_4239_4823 175
34 3300003373 JGI25407J50210_10048547 JGI25407J50210_100485472 176
35 3300005981 Ga0081538_10001586 Ga0081538_100015869 176
36 3300006847 Ga0075431_100129213 Ga0075431_1001292133 176
37 3300006880 Ga0075429_100538173 Ga0075429_1005381733 176
38 3300050510 nmdc:mga06r32_174761_c1 nmdc:mga06r32_174761_c1_229_786 176
39 3300053088 Ga0500644_0036305 Ga0500644_0036305_974_1552 177
40 3300005329 Ga0070683_100468927 Ga0070683_1004689272 178
41 3300005336 Ga0070680_100171859 Ga0070680_1001718592 178
42 3300044735 Ga0466968_0016123 Ga0466968_0016123_1401_1976 178
43 3300053090 Ga0500646_0000037 Ga0500646_0000037_13851_14471 178
44 3300005457 Ga0070662_100084073 Ga0070662_1000840733 179
45 3300005719 Ga0068861_100905869 Ga0068861_1009058691 179
46 3300017792 Ga0163161_10135939 Ga0163161_101359392 179
47 3300025908 Ga0207643_10428757 Ga0207643_104287571 179
48 3300025921 Ga0207652_10008931 Ga0207652_100089316 179
49 3300025933 Ga0207706_10206606 Ga0207706_102066063 179
50 3300025944 Ga0207661_10365037 Ga0207661_103650372 179
51 3300025972 Ga0207668_10039798 Ga0207668_100397983 179
52 3300026118 Ga0207675_100016617 Ga0207675_1000166174 179
53 3300050507 nmdc:mga05p37_339938_c1 nmdc:mga05p37_339938_c1_885_1454 179
54 3300005328 Ga0070676_10230707 Ga0070676_102307072 180
55 3300005329 Ga0070683_100006110 Ga0070683_1000061107 180
56 3300005331 Ga0070670_100232909 Ga0070670_1002329092 180
57 3300005334 Ga0068869_100064993 Ga0068869_1000649932 180
58 3300005338 Ga0068868_100030636 Ga0068868_1000306363 180
59 3300005344 Ga0070661_100037515 Ga0070661_1000375153 180
60 3300005354 Ga0070675_100001692 Ga0070675_1000016928 180
61 3300005366 Ga0070659_100034903 Ga0070659_1000349031 180
62 3300005441 Ga0070700_100021719 Ga0070700_1000217193 180
63 3300005455 Ga0070663_100013176 Ga0070663_1000131762 180
64 3300005457 Ga0070662_100013555 Ga0070662_1000135555 180
65 3300005563 Ga0068855_100330082 Ga0068855_1003300823 180
66 3300005564 Ga0070664_100001631 Ga0070664_1000016313 180
67 3300005577 Ga0068857_100008158 Ga0068857_1000081588 180
68 3300005616 Ga0068852_100147203 Ga0068852_1001472032 180
69 3300005618 Ga0068864_100404361 Ga0068864_1004043612 180
70 3300005719 Ga0068861_100058638 Ga0068861_1000586382 180
71 3300006880 Ga0075429_100379926 Ga0075429_1003799263 180
72 3300006881 Ga0068865_100323496 Ga0068865_1003234962 180
73 3300009098 Ga0105245_10095148 Ga0105245_100951484 180
74 3300009553 Ga0105249_10355583 Ga0105249_103555832 180
75 3300010375 Ga0105239_10179398 Ga0105239_101793983 180
76 3300011119 Ga0105246_10429066 Ga0105246_104290662 180
77 3300013308 Ga0157375_11485335 Ga0157375_114853352 180
78 3300014326 Ga0157380_10739731 Ga0157380_107397312 180
79 3300014745 Ga0157377_10006784 Ga0157377_100067843 180
80 3300025901 Ga0207688_10159344 Ga0207688_101593442 180
81 3300025907 Ga0207645_10108249 Ga0207645_101082492 180
82 3300025908 Ga0207643_10129983 Ga0207643_101299833 180
83 3300025923 Ga0207681_10037496 Ga0207681_100374964 180
84 3300025925 Ga0207650_10199425 Ga0207650_101994252 180
85 3300025926 Ga0207659_10007966 Ga0207659_100079663 180
86 3300025927 Ga0207687_10186522 Ga0207687_101865223 180
87 3300025932 Ga0207690_10057799 Ga0207690_100577993 180
88 3300025933 Ga0207706_10013402 Ga0207706_100134027 180
89 3300025942 Ga0207689_10003715 Ga0207689_100037154 180
90 3300025944 Ga0207661_10032794 Ga0207661_100327942 180
91 3300025949 Ga0207667_10244029 Ga0207667_102440293 180
92 3300025981 Ga0207640_10082405 Ga0207640_100824052 180
93 3300026023 Ga0207677_10006644 Ga0207677_100066446 180
94 3300026035 Ga0207703_10110609 Ga0207703_101106093 180
95 3300026067 Ga0207678_10008393 Ga0207678_100083934 180
96 3300026075 Ga0207708_10032529 Ga0207708_100325293 180
97 3300026089 Ga0207648_10176705 Ga0207648_101767052 180
98 3300026095 Ga0207676_10361549 Ga0207676_103615492 180
99 3300026116 Ga0207674_10004071 Ga0207674_1000407110 180
100 3300026118 Ga0207675_100073447 Ga0207675_1000734475 180
101 3300026142 Ga0207698_10354303 Ga0207698_103543032 180
102 3300050508 nmdc:mga09592_347606_c1 nmdc:mga09592_347606_c1_36_608 180
103 3300050511 nmdc:mga08y16_353245_c1 nmdc:mga08y16_353245_c1_117_689 180
104 iso_pu_bacteria 2501939600 2501941470 180
105 iso_pu_bacteria 2831935698 2831937939 180
106 iso_pu_bacteria 2832004796 2832007558 180
107 iso_pu_bacteria 2855683550 2855689339 180
108 iso_pu_bacteria 2856858025 2856861125 180
109 iso_pu_bacteria 2858868258 2858872718 180
110 iso_pu_bacteria 2861520306 2861520683 180
111 iso_pu_bacteria 2866065130 2866071007 180
112 iso_pu_bacteria 2867507094 2867507779 180
113 iso_pu_bacteria 2902582711 2902587956 180
114 iso_pu_bacteria 649633069 649811886 180
115 iso_pu_bacteria 8001781756 8001781850 180
116 3300005456 Ga0070678_100154843 Ga0070678_1001548433 181
117 3300026121 Ga0207683_10100863 Ga0207683_101008632 181
118 3300032126 Ga0307415_100014043 Ga0307415_1000140433 181
119 3300035172 Ga0373955_0180310 Ga0373955_0180310_156_842 181
120 3300044694 Ga0466963_0256296 Ga0466963_0256296_651_1211 181
121 3300045976 Ga0466967_0051904 Ga0466967_0051904_1725_2285 181
122 3300045976 Ga0466967_0779871 Ga0466967_0779871_333_881 181
123 3300010375 Ga0105239_10545468 Ga0105239_105454682 182
124 3300014325 Ga0163163_10738302 Ga0163163_107383022 182
125 3300031995 Ga0307409_100508243 Ga0307409_1005082432 182
126 3300032002 Ga0307416_101530206 Ga0307416_1015302061 182
127 3300032126 Ga0307415_100088512 Ga0307415_1000885124 182
128 iso_pu_bacteria 2858902515 2858903836 182
129 3300003316 rootH1_10081312 rootH1_100813123 183
130 iso_pu_bacteria 2867302475 2867304805 183
131 iso_pu_bacteria 8003830390 8003835835 183
132 iso_pu_bacteria 8055412473 8055417531 183
133 iso_pu_bacteria 8057568493 8057568942 183
134 3300005340 Ga0070689_101311170 Ga0070689_1013111701 184
135 3300005985 Ga0081539_10000420 Ga0081539_100004206 184
136 3300006844 Ga0075428_100596546 Ga0075428_1005965462 184
137 3300006880 Ga0075429_100020182 Ga0075429_1000201823 184
138 3300009147 Ga0114129_10980305 Ga0114129_109803051 184
139 3300009147 Ga0114129_11270139 Ga0114129_112701392 184
140 3300031824 Ga0307413_10214375 Ga0307413_102143752 184
141 3300050507 nmdc:mga05p37_460713_c1 nmdc:mga05p37_460713_c1_72_659 184
142 iso_pu_bacteria 2880495981 2880499320 184
143 3300005564 Ga0070664_100169063 Ga0070664_1001690632 185
144 3300009094 Ga0111539_10136563 Ga0111539_101365632 185
145 iso_pu_bacteria 2855670206 2855670999 185
146 iso_pu_bacteria 2855676851 2855682199 185
147 iso_pu_bacteria 2857288857 2857292389 185
148 iso_pu_bacteria 2858848962 2858853055 185
149 iso_pu_bacteria 2858882152 2858884144 185
150 iso_pu_bacteria 2858888857 2858889704 185
151 iso_pu_bacteria 2858895516 2858896624 185
152 iso_pu_bacteria 2867312974 2867315594 185
153 iso_pu_bacteria 2867319477 2867324441 185
154 iso_pu_bacteria 2869048445 2869050952 185
155 iso_pu_bacteria 2869061728 2869064596 185
156 iso_pu_bacteria 2869068681 2869073732 185
157 iso_pu_bacteria 2929219909 2929221298 185
158 iso_pu_bacteria 2929226422 2929227918 185
159 iso_pu_bacteria 2996221748 2996226585 185
160 iso_pu_bacteria 8003870546 8003874936 185
161 iso_pu_bacteria 8054704163 8054710397 185
162 iso_pu_bacteria 8054727385 8054731969 185
163 iso_pu_bacteria 8054734606 8054739105 185
164 3300028794 Ga0307515_10040622 Ga0307515_100406229 186
165 3300032126 Ga0307415_100016503 Ga0307415_1000165035 186
166 3300049581 Ga0501047_0002938 Ga0501047_0002938_6128_6709 186
167 3300053092 Ga0500583_0007834 Ga0500583_0007834_1840_2457 186
168 3300053096 Ga0500641_0092878 Ga0500641_0092878_280_897 186
169 3300053146 Ga0500588_0016919 Ga0500588_0016919_909_1526 186
170 3300053151 Ga0500604_0092570 Ga0500604_0092570_13_609 186
171 iso_pu_bacteria 2675903059 2676486006 186
172 iso_pu_bacteria 2772190715 2772644768 186
173 iso_pu_bacteria 2880489317 2880492986 186
174 3300009177 Ga0105248_10270172 Ga0105248_102701721 187
175 3300025941 Ga0207711_10174227 Ga0207711_101742271 187
176 3300025942 Ga0207689_10130974 Ga0207689_101309742 187
177 3300035207 Ga0373942_0054937 Ga0373942_0054937_468_1091 187
178 3300038443 Ga0395901_0285482 Ga0395901_0285482_129_704 187
179 3300046459 Ga0495629_0158197 Ga0495629_0158197_60_650 187
180 3300047319 Ga0495674_0281575 Ga0495674_0281575_247_825 187
181 3300050507 nmdc:mga05p37_1222404_c1 nmdc:mga05p37_1222404_c1_53_622 187
182 3300005981 Ga0081538_10035074 Ga0081538_100350742 188
183 3300005983 Ga0081540_1107545 Ga0081540_11075452 188
184 3300006844 Ga0075428_100000410 Ga0075428_10000041035 188
185 3300006846 Ga0075430_100003046 Ga0075430_1000030463 188
186 3300006847 Ga0075431_100002781 Ga0075431_10000278110 188
187 3300006880 Ga0075429_100005553 Ga0075429_1000055533 188
188 3300009147 Ga0114129_10000074 Ga0114129_1000007418 188
189 3300009177 Ga0105248_10405455 Ga0105248_104054551 188
190 3300044658 Ga0466972_0141345 Ga0466972_0141345_290_859 188
191 3300050491 nmdc:mga00v17_165612_c2 nmdc:mga00v17_165612_c2_335_931 188
192 3300050507 nmdc:mga05p37_420_c1 nmdc:mga05p37_420_c1_18648_19217 188
193 3300050508 nmdc:mga09592_13_c1 nmdc:mga09592_13_c1_100212_100781 188
194 3300050509 nmdc:mga0qj67_79_c2 nmdc:mga0qj67_79_c2_18783_19352 188
195 3300050510 nmdc:mga06r32_839_c1 nmdc:mga06r32_839_c1_18669_19238 188
196 3300005436 Ga0070713_100218273 Ga0070713_1002182732 189
197 3300005563 Ga0068855_100888838 Ga0068855_1008888382 189
198 3300005564 Ga0070664_100168457 Ga0070664_1001684572 189
199 3300005617 Ga0068859_101850541 Ga0068859_1018505411 189
200 3300005618 Ga0068864_100023547 Ga0068864_1000235473 189
201 3300005841 Ga0068863_100147517 Ga0068863_1001475172 189
202 3300005842 Ga0068858_100050086 Ga0068858_1000500864 189
203 3300006173 Ga0070716_100062361 Ga0070716_1000623613 189
204 3300006175 Ga0070712_100434657 Ga0070712_1004346572 189
205 3300006931 Ga0097620_101850748 Ga0097620_1018507481 189
206 3300009094 Ga0111539_11019491 Ga0111539_110194911 189
207 3300009177 Ga0105248_10086978 Ga0105248_100869782 189
208 3300010375 Ga0105239_10663291 Ga0105239_106632912 189
209 3300014325 Ga0163163_10033491 Ga0163163_100334911 189
210 3300014968 Ga0157379_10019050 Ga0157379_100190503 189
211 3300025915 Ga0207693_10165005 Ga0207693_101650052 189
212 3300025939 Ga0207665_10311603 Ga0207665_103116031 189
213 3300025945 Ga0207679_10173560 Ga0207679_101735601 189
214 3300026035 Ga0207703_10130007 Ga0207703_101300073 189
215 3300026088 Ga0207641_10035190 Ga0207641_100351902 189
216 3300026095 Ga0207676_10019504 Ga0207676_100195044 189
217 3300026116 Ga0207674_10076301 Ga0207674_100763012 189
218 3300028786 Ga0307517_10133388 Ga0307517_101333882 189
219 3300035171 Ga0373946_0020036 Ga0373946_0020036_1339_1941 189
220 3300035692 Ga0373935_0040899 Ga0373935_0040899_1351_1953 189
221 3300037312 Ga0395899_0245592 Ga0395899_0245592_66_659 189
222 3300037466 Ga0395898_0360871 Ga0395898_0360871_573_1166 189
223 3300037471 Ga0395905_0061276 Ga0395905_0061276_1324_1917 189
224 3300038443 Ga0395901_0006447 Ga0395901_0006447_2622_3215 189
225 3300046459 Ga0495629_0022922 Ga0495629_0022922_1533_2135 189
226 3300046517 Ga0495630_0070501 Ga0495630_0070501_1697_2299 189
227 3300047673 Ga0495593_0315515 Ga0495593_0315515_76_678 189
228 3300048907 Ga0496104_0184229 Ga0496104_0184229_241_843 189
229 3300048908 Ga0496105_0067382 Ga0496105_0067382_2179_2781 189
230 3300048909 Ga0496106_0632277 Ga0496106_0632277_73_675 189
231 3300048911 Ga0496108_0027599 Ga0496108_0027599_2934_3536 189
232 3300048912 Ga0496109_0008121 Ga0496109_0008121_8016_8618 189
233 3300048913 Ga0496110_0034704 Ga0496110_0034704_95_697 189
234 3300048914 Ga0496111_0058192 Ga0496111_0058192_1677_2279 189
235 3300048915 Ga0496112_0143827 Ga0496112_0143827_565_1167 189
236 3300048915 Ga0496112_0258765 Ga0496112_0258765_211_801 189
237 3300048916 Ga0496113_0005629 Ga0496113_0005629_65_667 189
238 3300050512 nmdc:mga0n895_1158355_c1 nmdc:mga0n895_1158355_c1_32_604 189
239 3300053143 Ga0500579_077136 Ga0500579_077136_799_1374 189
240 3300005356 Ga0070674_100278976 Ga0070674_1002789762 190
241 3300005841 Ga0068863_100017401 Ga0068863_1000174015 190
242 3300005981 Ga0081538_10039939 Ga0081538_100399392 190
243 3300005985 Ga0081539_10153570 Ga0081539_101535701 190
244 3300009147 Ga0114129_11021265 Ga0114129_110212651 190
245 3300009177 Ga0105248_10181162 Ga0105248_101811623 190
246 3300026088 Ga0207641_10025364 Ga0207641_100253645 190
247 3300028379 Ga0268266_10235935 Ga0268266_102359353 190
248 3300031456 Ga0307513_10025499 Ga0307513_100254995 190
249 3300031456 Ga0307513_10296733 Ga0307513_102967331 190
250 3300037312 Ga0395899_0280283 Ga0395899_0280283_185_757 190
251 3300037418 Ga0395900_1172260 Ga0395900_1172260_28_603 190
252 3300037471 Ga0395905_0079714 Ga0395905_0079714_2466_3038 190
253 3300038443 Ga0395901_0132194 Ga0395901_0132194_1193_1765 190
254 3300048907 Ga0496104_0298790 Ga0496104_0298790_283_882 190
255 3300048911 Ga0496108_0532289 Ga0496108_0532289_107_706 190
256 3300048913 Ga0496110_0859425 Ga0496110_0859425_181_780 190
257 3300048915 Ga0496112_0007784 Ga0496112_0007784_5221_5820 190
258 3300048915 Ga0496112_0317486 Ga0496112_0317486_196_795 190
259 3300049576 Ga0501040_0120330 Ga0501040_0120330_118_693 190
260 3300061734 Ga0530510_0150181 Ga0530510_0150181_685_1260 190
261 3300003373 JGI25407J50210_10015008 JGI25407J50210_100150082 191
262 3300003373 JGI25407J50210_10019790 JGI25407J50210_100197902 191
263 3300005981 Ga0081538_10001666 Ga0081538_1000166616 191
264 3300005981 Ga0081538_10009983 Ga0081538_100099833 191
265 3300005981 Ga0081538_10027135 Ga0081538_100271353 191
266 3300005985 Ga0081539_10090832 Ga0081539_100908323 191
267 3300006844 Ga0075428_100013977 Ga0075428_1000139778 191
268 3300006844 Ga0075428_100145896 Ga0075428_1001458962 191
269 3300006846 Ga0075430_100021794 Ga0075430_1000217947 191
270 3300006847 Ga0075431_101114858 Ga0075431_1011148582 191
271 3300006852 Ga0075433_10048815 Ga0075433_100488156 191
272 3300006871 Ga0075434_100014598 Ga0075434_10001459810 191
273 3300006880 Ga0075429_100007537 Ga0075429_1000075377 191
274 3300009094 Ga0111539_10586327 Ga0111539_105863272 191
275 3300009147 Ga0114129_10046795 Ga0114129_100467955 191
276 3300009147 Ga0114129_10071615 Ga0114129_100716157 191
277 3300009147 Ga0114129_10356251 Ga0114129_103562511 191
278 3300009147 Ga0114129_10675665 Ga0114129_106756652 191
279 3300028794 Ga0307515_10158666 Ga0307515_101586662 191
280 3300031731 Ga0307405_10000800 Ga0307405_100008006 191
281 3300031824 Ga0307413_10028988 Ga0307413_100289884 191
282 3300031901 Ga0307406_10003920 Ga0307406_100039201 191
283 3300031995 Ga0307409_100001212 Ga0307409_1000012127 191
284 3300032002 Ga0307416_100011144 Ga0307416_1000111446 191
285 3300032126 Ga0307415_100001049 Ga0307415_1000010497 191
286 3300037418 Ga0395900_0307307 Ga0395900_0307307_985_1560 191
287 3300037466 Ga0395898_0317895 Ga0395898_0317895_425_1000 191
288 3300050507 nmdc:mga05p37_10842_c1 nmdc:mga05p37_10842_c1_2849_3424 191
289 3300050507 nmdc:mga05p37_51081_c1 nmdc:mga05p37_51081_c1_3136_3711 191
290 3300050508 nmdc:mga09592_15384_c1 nmdc:mga09592_15384_c1_982_1557 191
291 3300050509 nmdc:mga0qj67_17873_c1 nmdc:mga0qj67_17873_c1_3457_4032 191
292 3300050512 nmdc:mga0n895_13615_c1 nmdc:mga0n895_13615_c1_4199_4774 191
293 3300050513 nmdc:mga0rr50_675730_c1 nmdc:mga0rr50_675730_c1_244_819 191
294 3300050515 nmdc:mga0a205_24025_c1 nmdc:mga0a205_24025_c1_181_756 191
295 3300050515 nmdc:mga0a205_763387_c1 nmdc:mga0a205_763387_c1_42_641 191
296 3300006844 Ga0075428_100323941 Ga0075428_1003239412 192
297 3300059423 Ga0590074_029978 Ga0590074_029978_110_718 193
298 3300009093 Ga0105240_10223379 Ga0105240_102233792 194
299 3300009098 Ga0105245_10433941 Ga0105245_104339412 194
300 3300009147 Ga0114129_10544289 Ga0114129_105442892 194
301 3300010375 Ga0105239_10875933 Ga0105239_108759332 194
302 3300042008 Ga0439450_014548 Ga0439450_014548_919_1515 194
303 3300042011 Ga0439454_007808 Ga0439454_007808_711_1307 194
304 3300042016 Ga0439463_018134 Ga0439463_018134_380_976 194
305 3300042436 Ga0439435_0050978 Ga0439435_0050978_101_697 194
306 3300042437 Ga0439444_0011398 Ga0439444_0011398_65_661 194
307 3300042439 Ga0439464_0014678 Ga0439464_0014678_261_857 194
308 3300046615 Ga0495656_0066058 Ga0495656_0066058_452_1048 194
309 3300046648 Ga0495611_0182277 Ga0495611_0182277_327_923 194
310 3300049580 Ga0501046_0167336 Ga0501046_0167336_103_690 194
311 3300050507 nmdc:mga05p37_289137_c1 nmdc:mga05p37_289137_c1_618_1214 194
312 3300003203 JGI25406J46586_10002690 JGI25406J46586_100026903 196
313 3300005985 Ga0081539_10004771 Ga0081539_100047719 196

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10400

Vir_act_alpha_C

Virulence activator alpha C-term

100

178

0.96

PF03551

PadR

Transcriptional regulator PadR-like family

7

88

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xma-assembly1.cif.gz_B-2 structure of a transcriptional regulator from clostridium thermocellum cth-833 0.9448 3 79
3b2e-assembly2.cif.gz_G crystal structure of s. cerevisiae get3 in the open conformation in complex with get1 cytosolic domain 0.934 113 170
3b2e-assembly1.cif.gz_F crystal structure of s. cerevisiae get3 in the open conformation in complex with get1 cytosolic domain 0.9261 110 170
1xma-assembly1.cif.gz_A structure of a transcriptional regulator from clostridium thermocellum cth-833 0.9255 3 79
1jmb-assembly2.cif.gz_B crystal structure of four-helix bundle model 0.9241 113 163
ID Description Score Start End Superfamily
af_P64588_52_154_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9406 3 78 1.10.10.10
af_P71704_1_89_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9388 3 85 1.10.10.10
3b2eG00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.934 113 170 1.10.287.660
3b2eF00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9261 110 170 1.10.287.660
1xmaA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9255 3 79 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A399SP22-F1-model_v4 PadR family transcriptional regulator 0.9595 1 121
AF-A0A2N5X2X5-F1-model_v4 PadR family transcriptional regulator 0.9485 1 134
AF-A0A399SP22-F1-model_v4 PadR family transcriptional regulator 0.9443 1 121
AF-A0A6N3FDT3-F1-model_v4 Transcriptional regulator YqjI 0.9429 3 79
AF-I3ZK53-F1-model_v4 Putative transcriptional regulator 0.9421 1 78

Feature Viewer

pLDDT pTM Quality
86.16 0.77 High
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Predicted Structure (AlphaFold2)

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