F401875

General Info

Members Datasets Scaffolds Average Seq Length
312 214 291 885

Family's Representative Sequence

Representative Sequence 3300048920|Ga0496117_0029321|Ga0496117_0029321_38_3160
Length 1040
Sequence MDASRALRLEECREHGARLVQGPSGLCALPPSLEQQIVRPLLHQLKVEQAGLFLEHRADGQRHHADCRPPRSAGQAQRVVVPPLHLDGPAMDQMSAAYTAPGGGRAWRVPSNPELAPAPRRGVDVHQAKGRRCAAPWTITSEPPLSIRHLDRLLSPASVAVFGASNRPGSVGATVWRNLRAGSFAGPVYGVNPKHGSLDGVPIFSSAAHLPAAPDLALICTPPATVAPLVAELGALGTRAVVIVTAGLSAQQKQAALEAARPFTLRLLGPNCLGLLSPHIGLNASFAHADALAGDVAFVSQSGALVTAVLDWTRSRGVGLSHLISLGDHCDVDFGDLLDHLASDARTRSILLYVEAIESPRKFMSAARAAARNKPVIVVKAGRAGNGMKAASSHTGALAGSDIVYDAAIRRAGMLRVDTLQELFIAAETLSRFRSNRHSTLTVMTNGGGAGVMAADAAAREGVTLADPAAKLLARLDAVLPANWSHANPIDIIGDAPVERYAETLSALLADESAGAVLFMHAPTAIVRSEDIARACLPLVRSHASRVMSTWLGDNAVAQARKLFEDAGVADYATPEEAVHAFAMLQTYRRNQETLMETPSACRNAAPDSASVRATLAAATAEGREWLGEQEAKSLLQAYGIETVPTLAVAATAEAAVEAARGLGYPVALKILSRDITHKSDVGGVRLGLCDEAALGKAACEMLDAVRTARPQARIDGFTVQRTVHRPHAQEVIVGASIDSVFGPVILCGQGGTAVEVVGDTAIALPPLNRALAHELVSRTRVARLLAGFRDHPPARLDALYDVLIAVSQMLADLPQLAELDINPLWVDENGALALDARVRLSPTPVGGAERFAILPYPAQWVRAQTWNDRAIVVRPIRPEDEAQHRRFLESLDAEDIRMRFFSTRKELPRSELARLTQIDYDREMAFIAEATDAQGGAETLGVARTVSDPDNVEAEFAIVVRSDLKGQGLGALLFERLIEHARRRGIERLVGLVLRENTRMLKLSAAMGFKADPAEPPSSGLRRMVLELKTSASPSCSSA

Samples

Sample ID Description Type Environment
1 2513020051 Variovorax sp. CF313 Isolate Rhizosphere
2 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
3 2565956521 Vibrio rhizosphaerae DSM 18581 Isolate Rhizosphere
4 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
5 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
6 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
7 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
8 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
9 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
10 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
11 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
12 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
13 2643221672 Variovorax sp. Root434 Isolate Unclassified
14 2648501241 Vibrio splendidus UCD-SED7 Isolate Rhizosphere
15 2651869818 Vibrio splendidus UCD-SED10 Isolate Rhizosphere
16 2738541337 Pelomonas sp. BT06 Isolate Unclassified
17 2818991446 Variovorax sp. 1180 Isolate Unclassified
18 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
19 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
20 2929520902 Variovorax beijingensis 502 Isolate Unclassified
21 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
22 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
23 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
24 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
25 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
26 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
27 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
28 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
29 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
30 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
31 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
32 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
33 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
34 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
35 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
36 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
37 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
38 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
39 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
40 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
41 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
42 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
43 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
44 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
45 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
46 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
47 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
48 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
49 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
50 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
51 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
52 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
53 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
54 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
55 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
56 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
57 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
58 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
59 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
60 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
61 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
62 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
63 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
64 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
65 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
66 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
67 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
68 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
69 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
70 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
71 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
72 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
73 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
74 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
75 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
76 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
77 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
78 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
79 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
80 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
81 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
82 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
83 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
84 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
85 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
86 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
87 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
88 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
89 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
90 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
91 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
92 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
93 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
94 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
95 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
96 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
97 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
98 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
99 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
100 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
104 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
106 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
107 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
108 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
110 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
111 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
112 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
114 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
115 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
116 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
117 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
118 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
119 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
120 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
149 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
151 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
153 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
154 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
155 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
156 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
157 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
158 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
159 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
160 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
161 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
162 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
163 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
164 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
165 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
166 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
167 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
168 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
169 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
170 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
171 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
172 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
173 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
174 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
175 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
176 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
177 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
178 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
179 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
180 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
181 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
182 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
183 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
184 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
185 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
186 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
187 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
188 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
189 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
190 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
191 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
192 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
193 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
194 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
195 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
196 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
197 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
198 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
199 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
200 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
201 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
202 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
203 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
204 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
205 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
206 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
207 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
208 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
209 3300053128 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 endosphere Metagenome Endosphere
210 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
211 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
212 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
213 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
214 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.27
Metatranscriptomes 0
Isolates 6.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 24.68
Nodule 0.32
Rhizoplane 2.24
Rhizosphere 60.58
Stem 0
Stem Tuber 0
Unclassified 12.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000099 3300002773 Bacteria 60826
2 JGI25150J39212_1001778 3300002774 Bacteria 5743
3 JGI25159J45721_1000611 3300002987 Bacteria 15947
4 JGI25151J46595_10000263 3300003187 Bacteria 60826
5 JGI25153J46596_10000184 3300003215 Bacteria 60826
6 JGI25153J46596_10006312 3300003215 Bacteria 6035
7 rootH1_10002119 3300003316 Bacteria 28351
8 rootL2_10010090 3300003322 Bacteria 35147
9 JGI25160J50197_1000141 3300003354 Bacteria 64577
10 Ga0055535_1000115 3300003761 Bacteria 86313
11 Ga0055535_1000123 3300003761 Bacteria 83521
12 Ga0055542_1000028 3300003762 Bacteria 251458
13 Ga0055529_1000159 3300003763 Bacteria 93013
14 Ga0055526_1000156 3300003771 Bacteria 60730
15 Ga0055526_1002910 3300003771 Bacteria 11252
16 Ga0055537_1000073 3300003773 Bacteria 72132
17 Ga0055524_1000217 3300003775 Bacteria 60730
18 Ga0055536_1003455 3300003781 Bacteria 8463
19 Ga0055534_1000087 3300003784 Bacteria 72125
20 Ga0055528_1000130 3300003790 Bacteria 60730
21 Ga0055540_1000092 3300003792 Bacteria 98476
22 Ga0055540_1000582 3300003792 Bacteria 26747
23 Ga0055531_10000724 3300003794 Bacteria 28069
24 Ga0055531_10006571 3300003794 Bacteria 6568
25 Ga0055543_1000860 3300004625 Bacteria 14635
26 Ga0065165_1001511 3300005262 Bacteria 24586
27 Ga0065165_1001737 3300005262 Bacteria 21755
28 Ga0070676_10001432 3300005328 Bacteria 12052
29 Ga0070676_10011886 3300005328 Bacteria 4743
30 Ga0070676_10013809 3300005328 Bacteria 4430
31 Ga0070690_100003415 3300005330 Bacteria 8688
32 Ga0070670_100002714 3300005331 Bacteria 14620
33 Ga0070670_100033234 3300005331 Bacteria 4443
34 Ga0070677_10001092 3300005333 Bacteria 8743
35 Ga0068869_100001571 3300005334 Bacteria 13584
36 Ga0070666_10001397 3300005335 Bacteria 14578
37 Ga0070666_10004237 3300005335 Bacteria 8712
38 Ga0068868_100007310 3300005338 Bacteria 7858
39 Ga0070668_100000295 3300005347 Bacteria 32689
40 Ga0070669_100000388 3300005353 Bacteria 33818
41 Ga0070669_100010849 3300005353 Bacteria 6466
42 Ga0070669_100018827 3300005353 Bacteria 4936
43 Ga0070675_100001773 3300005354 Bacteria 15917
44 Ga0070675_100004874 3300005354 Bacteria 10245
45 Ga0070675_100013049 3300005354 Bacteria 6526
46 Ga0070675_100022394 3300005354 Bacteria 5050
47 Ga0070671_100003800 3300005355 Bacteria 11847
48 Ga0070671_100053199 3300005355 Bacteria 3366
49 Ga0070674_100001342 3300005356 Bacteria 12978
50 Ga0070673_100001336 3300005364 Bacteria 14365
51 Ga0070673_100001516 3300005364 Bacteria 13660
52 Ga0070659_100000178 3300005366 Bacteria 48934
53 Ga0070667_100002342 3300005367 Bacteria 16594
54 Ga0070667_100004537 3300005367 Bacteria 11685
55 Ga0070667_100043582 3300005367 Bacteria 3766
56 Ga0070663_100000397 3300005455 Bacteria 22854
57 Ga0070678_100014466 3300005456 Bacteria 4979
58 Ga0070662_100000588 3300005457 Bacteria 22119
59 Ga0068867_100000223 3300005459 Bacteria 37387
60 Ga0068867_100002338 3300005459 Bacteria 13348
61 Ga0068867_100003163 3300005459 Bacteria 11609
62 Ga0070679_100007595 3300005530 Bacteria 10145
63 Ga0068853_100022880 3300005539 Bacteria 5225
64 Ga0070672_100000890 3300005543 Bacteria 17934
65 Ga0070672_100013786 3300005543 Bacteria 5715
66 Ga0070672_100055748 3300005543 Bacteria 3097
67 Ga0068859_100010122 3300005617 Bacteria 9504
68 Ga0068859_100027659 3300005617 Bacteria 5689
69 Ga0068864_100010281 3300005618 Bacteria 7728
70 Ga0068864_100014835 3300005618 Bacteria 6473
71 Ga0068864_100020422 3300005618 Bacteria 5542
72 Ga0068866_10002125 3300005718 Bacteria 8250
73 Ga0068861_100000719 3300005719 Bacteria 19809
74 Ga0068863_100000977 3300005841 Bacteria 28767
75 Ga0068863_100009341 3300005841 Bacteria 9570
76 Ga0068858_100000366 3300005842 Bacteria 47603
77 Ga0068860_100000619 3300005843 Bacteria 41996
78 Ga0068860_100050430 3300005843 Bacteria 3962
79 Ga0068862_100008691 3300005844 Bacteria 8402
80 Ga0068862_100015075 3300005844 Bacteria 6421
81 Ga0075363_100008645 3300006048 Bacteria 4753
82 Ga0075366_10000256 3300006195 Bacteria 23399
83 Ga0097621_100008807 3300006237 Bacteria 7292
84 Ga0075370_10000830 3300006353 Bacteria 12470
85 Ga0075430_100018980 3300006846 Bacteria 5850
86 Ga0075429_100000203 3300006880 Bacteria 39542
87 Ga0068865_100001218 3300006881 Bacteria 14963
88 Ga0068865_100017766 3300006881 Bacteria 4579
89 Ga0097620_100010122 3300006931 Bacteria 9504
90 Ga0097620_100027659 3300006931 Bacteria 5689
91 Ga0105240_10000842 3300009093 Bacteria 55187
92 Ga0105240_10001225 3300009093 Bacteria 44616
93 Ga0105240_10001696 3300009093 Bacteria 37333
94 Ga0105243_10007022 3300009148 Bacteria 8664
95 Ga0105243_10011745 3300009148 Bacteria 6622
96 Ga0105248_10003839 3300009177 Bacteria 16654
97 Ga0105248_10015757 3300009177 Bacteria 8331
98 Ga0105237_10003967 3300009545 Bacteria 17311
99 Ga0105239_10001665 3300010375 Bacteria 29281
100 Ga0105239_10029089 3300010375 Bacteria 6075
101 Ga0157374_10003593 3300013296 Bacteria 13056
102 Ga0163162_10004810 3300013306 Bacteria 13029
103 Ga0163162_10009632 3300013306 Bacteria 9397
104 Ga0157372_10014080 3300013307 Bacteria 8541
105 Ga0157375_10004535 3300013308 Bacteria 12064
106 Ga0157375_10008022 3300013308 Bacteria 9244
107 Ga0163163_10005310 3300014325 Bacteria 11124
108 Ga0157380_10000608 3300014326 Bacteria 22058
109 Ga0157380_10020987 3300014326 Bacteria 4893
110 Ga0182008_10018491 3300014497 Bacteria 3608
111 Ga0157377_10000029 3300014745 Bacteria 134270
112 Ga0157379_10006224 3300014968 Bacteria 10275
113 Ga0157379_10008357 3300014968 Bacteria 8995
114 Ga0157376_10007704 3300014969 Bacteria 7713
115 Ga0182007_10000340 3300015262 Bacteria 29721
116 Ga0163161_10000923 3300017792 Bacteria 22682
117 Ga0163161_10010947 3300017792 Bacteria 6286
118 Ga0213872_10000330 3300021361 Bacteria 40103
119 Ga0209436_101297 3300025208 Bacteria 8903
120 Ga0209672_100921 3300025228 Bacteria 13299
121 Ga0209147_100878 3300025229 Bacteria 13846
122 Ga0209258_100060 3300025242 Bacteria 319881
123 Ga0209258_100067 3300025242 Bacteria 287603
124 Ga0207425_1000438 3300025245 Bacteria 27445
125 Ga0207425_1000457 3300025245 Bacteria 26348
126 Ga0209148_1000067 3300025254 Bacteria 338678
127 Ga0209759_1000282 3300025256 Bacteria 71259
128 Ga0209129_1000210 3300025258 Bacteria 68046
129 Ga0209129_1000234 3300025258 Bacteria 60913
130 Ga0209565_1000148 3300025263 Bacteria 96527
131 Ga0209455_1000136 3300025272 Bacteria 146375
132 Ga0209673_1000277 3300025273 Bacteria 96527
133 Ga0209673_1008893 3300025273 Bacteria 4418
134 Ga0209130_1000165 3300025284 Bacteria 96527
135 Ga0209130_1002821 3300025284 Bacteria 8085
136 Ga0209675_1000178 3300025291 Bacteria 72184
137 Ga0209676_1000123 3300025292 Bacteria 195351
138 Ga0209676_1001156 3300025292 Bacteria 28736
139 Ga0209025_1000650 3300025294 Bacteria 60913
140 Ga0209564_1000307 3300025295 Bacteria 96527
141 Ga0209564_1003418 3300025295 Bacteria 10886
142 Ga0209758_1000078 3300025297 Bacteria 266153
143 Ga0209758_1000091 3300025297 Bacteria 242583
144 Ga0209758_1000529 3300025297 Bacteria 60913
145 Ga0209050_1000188 3300025298 Bacteria 138865
146 Ga0209050_1000517 3300025298 Bacteria 64833
147 Ga0209256_1000241 3300025299 Bacteria 96845
148 Ga0207426_1000303 3300025302 Bacteria 96557
149 Ga0209051_1000091 3300025303 Bacteria 173683
150 Ga0209051_1000144 3300025303 Bacteria 134811
151 Ga0209051_1007746 3300025303 Bacteria 5817
152 Ga0209051_1008961 3300025303 Bacteria 5218
153 Ga0209257_1000057 3300025304 Bacteria 396985
154 Ga0209257_1000586 3300025304 Bacteria 60913
155 Ga0207682_10000553 3300025893 Bacteria 17226
156 Ga0207680_10002665 3300025903 Bacteria 8346
157 Ga0207680_10003785 3300025903 Bacteria 7123
158 Ga0207645_10003420 3300025907 Bacteria 12068
159 Ga0207695_10010203 3300025913 Bacteria 11521
160 Ga0207695_10028606 3300025913 Bacteria 6174
161 Ga0207671_10003147 3300025914 Bacteria 16737
162 Ga0207671_10014483 3300025914 Bacteria 6228
163 Ga0207662_10016470 3300025918 Bacteria 4172
164 Ga0207657_10018066 3300025919 Bacteria 6746
165 Ga0207681_10001593 3300025923 Bacteria 14601
166 Ga0207650_10022072 3300025925 Bacteria 4504
167 Ga0207659_10003270 3300025926 Bacteria 9707
168 Ga0207644_10005715 3300025931 Bacteria 8097
169 Ga0207644_10035970 3300025931 Bacteria 3474
170 Ga0207706_10000272 3300025933 Bacteria 56285
171 Ga0207706_10000355 3300025933 Bacteria 49431
172 Ga0207706_10004838 3300025933 Bacteria 12610
173 Ga0207706_10005429 3300025933 Bacteria 11880
174 Ga0207709_10003924 3300025935 Bacteria 8686
175 Ga0207709_10021449 3300025935 Bacteria 3657
176 Ga0207669_10002711 3300025937 Bacteria 7581
177 Ga0207704_10001367 3300025938 Bacteria 10900
178 Ga0207691_10002043 3300025940 Bacteria 19742
179 Ga0207691_10005164 3300025940 Bacteria 12607
180 Ga0207691_10006006 3300025940 Bacteria 11725
181 Ga0207691_10020388 3300025940 Bacteria 6267
182 Ga0207711_10026462 3300025941 Bacteria 4868
183 Ga0207689_10001532 3300025942 Bacteria 21988
184 Ga0207651_10007979 3300025960 Bacteria 5681
185 Ga0207668_10000316 3300025972 Bacteria 31416
186 Ga0207658_10000499 3300025986 Bacteria 35961
187 Ga0207677_10007198 3300026023 Bacteria 6132
188 Ga0207677_10010689 3300026023 Bacteria 5201
189 Ga0207703_10000616 3300026035 Bacteria 36009
190 Ga0207703_10006517 3300026035 Bacteria 9316
191 Ga0207703_10011999 3300026035 Bacteria 6749
192 Ga0207678_10002974 3300026067 Bacteria 15336
193 Ga0207641_10000540 3300026088 Bacteria 42491
194 Ga0207648_10000704 3300026089 Bacteria 37513
195 Ga0207648_10002020 3300026089 Bacteria 22151
196 Ga0207648_10006147 3300026089 Bacteria 11967
197 Ga0207648_10006743 3300026089 Bacteria 11389
198 Ga0207676_10019032 3300026095 Bacteria 5002
199 Ga0207675_100000729 3300026118 Bacteria 32615
200 Ga0207675_100005845 3300026118 Bacteria 11756
201 Ga0207675_100006542 3300026118 Bacteria 11029
202 Ga0207683_10001533 3300026121 Bacteria 20807
203 Ga0207683_10070203 3300026121 Bacteria 3094
204 Ga0207698_10004837 3300026142 Bacteria 8249
205 Ga0207698_10012090 3300026142 Bacteria 5631
206 Ga0268265_10001618 3300028380 Bacteria 18577
207 Ga0268264_10001037 3300028381 Bacteria 27928
208 Ga0307517_10000058 3300028786 Bacteria 148725
209 Ga0307515_10000104 3300028794 Bacteria 198238
210 Ga0307515_10000736 3300028794 Bacteria 75689
211 Ga0307515_10001095 3300028794 Bacteria 62092
212 Ga0307515_10005856 3300028794 Bacteria 24799
213 Ga0307515_10027693 3300028794 Bacteria 9671
214 Ga0307515_10030083 3300028794 Bacteria 9141
215 Ga0307512_10020656 3300030522 Bacteria 5952
216 Ga0307513_10001574 3300031456 Bacteria 32724
217 Ga0307513_10071135 3300031456 Bacteria 3632
218 Ga0307509_10004968 3300031507 Bacteria 18803
219 Ga0307408_100001293 3300031548 Bacteria 18749
220 Ga0307508_10000376 3300031616 Bacteria 53995
221 Ga0307508_10000684 3300031616 Bacteria 40683
222 Ga0307508_10008539 3300031616 Bacteria 9460
223 Ga0307514_10000528 3300031649 Bacteria 74778
224 Ga0307514_10029458 3300031649 Bacteria 4415
225 Ga0307516_10001485 3300031730 Bacteria 32330
226 Ga0307516_10002697 3300031730 Bacteria 23475
227 Ga0307516_10011809 3300031730 Bacteria 9466
228 Ga0307405_10000872 3300031731 Bacteria 11917
229 Ga0307406_10000295 3300031901 Bacteria 29344
230 Ga0307412_10004656 3300031911 Bacteria 7648
231 Ga0307409_100045320 3300031995 Bacteria 3319
232 Ga0307416_100021719 3300032002 Bacteria 4615
233 Ga0307414_10003084 3300032004 Bacteria 8847
234 Ga0373931_0000608 3300035691 Bacteria 14814
235 Ga0395905_0001102 3300037471 Bacteria 33960
236 Ga0395905_0008744 3300037471 Bacteria 9960
237 Ga0400490_55764 3300038726 Bacteria 34653
238 Ga0400483_209287 3300039062 Bacteria 7870
239 Ga0400489_50140 3300039093 Bacteria 6987
240 Ga0436361_0182416 3300039447 Bacteria 55509
241 Ga0436361_0471373 3300039447 Bacteria 3748
242 Ga0439466_0003549 3300041411 Bacteria 6030
243 Ga0439465_0003220 3300041413 Bacteria 5324
244 Ga0439431_0001289 3300041997 Bacteria 5505
245 Ga0439457_001827 3300042014 Bacteria 6285
246 Ga0450918_000147 3300042531 Bacteria 15516
247 Ga0451577_0002356 3300042876 Bacteria 22717
248 Ga0451577_0032834 3300042876 Bacteria 4679
249 Ga0453684_0000006 3300044712 Bacteria 1364191
250 Ga0453684_0000031 3300044712 Bacteria 752632
251 Ga0451576_0000194 3300045051 Bacteria 154080
252 Ga0451576_0020310 3300045051 Bacteria 7235
253 Ga0451576_0060041 3300045051 Bacteria 3967
254 Ga0495583_0000596 3300046506 Bacteria 49267
255 Ga0495606_0005197 3300046507 Bacteria 12574
256 Ga0495668_0005334 3300046616 Bacteria 8772
257 Ga0495649_0001161 3300046694 Bacteria 20440
258 Ga0495649_0003764 3300046694 Bacteria 10066
259 Ga0495687_014526 3300047443 Bacteria 4047
260 Ga0496102_0018503 3300048905 Bacteria 6123
261 Ga0496103_0007447 3300048906 Bacteria 6525
262 Ga0496104_0020803 3300048907 Bacteria 6017
263 Ga0496105_0009639 3300048908 Bacteria 7560
264 Ga0496106_0016812 3300048909 Bacteria 5412
265 Ga0496109_0014976 3300048912 Bacteria 6750
266 Ga0496114_0069022 3300048917 Bacteria 2968
267 Ga0496116_0030584 3300048919 Bacteria 3865
268 Ga0496117_0021125 3300048920 Bacteria 5283
269 Ga0496117_0029321 3300048920 Bacteria 4244
270 Ga0496118_0011411 3300048921 Bacteria 8673
271 Ga0501034_0000335 3300049571 Bacteria 82157
272 Ga0501198_000047 3300049649 Bacteria 40126
273 Ga0501222_000056 3300049662 Bacteria 40303
274 Ga0501221_000727 3300049704 Bacteria 5301
275 Ga0501080_0018960 3300049742 Bacteria 6373
276 Ga0501262_000121 3300049759 Bacteria 9754
277 nmdc:mga0k408_3163_c1 3300050493 Bacteria 8733
278 nmdc:mga07m45_1235_c1 3300050496 Bacteria 11578
279 nmdc:mga07m45_29372_c1 3300050496 Bacteria 3040
280 nmdc:mga07m45_3606_c1 3300050496 Bacteria 7475
281 nmdc:mga07m45_8762_c1 3300050496 Bacteria 5214
282 nmdc:mga0qj67_7970_c1 3300050509 Bacteria 7831
283 Ga0500644_0002131 3300053088 Bacteria 5010
284 Ga0500594_0001393 3300053118 Bacteria 5246
285 Ga0500607_000483 3300053121 Bacteria 38630
286 Ga0500626_001710 3300053128 Bacteria 7094
287 Ga0500658_0000936 3300053134 Bacteria 11904
288 Ga0500559_0000627 3300053136 Bacteria 24005
289 Ga0500622_0000525 3300053156 Bacteria 35545
290 Ga0500636_0006303 3300053177 Bacteria 6806
291 Ga0500587_000362 3300053739 Bacteria 5164

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048917 Ga0496114_0069022 Ga0496114_0069022_578_2956 768
2 3300026035 Ga0207703_10006517 Ga0207703_100065174 835
3 3300005364 Ga0070673_100001516 Ga0070673_10000151612 837
4 3300013306 Ga0163162_10009632 Ga0163162_100096324 837
5 3300006237 Ga0097621_100008807 Ga0097621_1000088074 840
6 3300009093 Ga0105240_10000842 Ga0105240_1000084211 842
7 3300025913 Ga0207695_10010203 Ga0207695_100102033 842
8 3300042876 Ga0451577_0002356 Ga0451577_0002356_11104_13797 842
9 3300049742 Ga0501080_0018960 Ga0501080_0018960_2505_5273 850
10 3300037471 Ga0395905_0001102 Ga0395905_0001102_21906_24575 854
11 3300005459 Ga0068867_100000223 Ga0068867_1000002234 858
12 3300009148 Ga0105243_10007022 Ga0105243_100070222 858
13 3300014745 Ga0157377_10000029 Ga0157377_1000002937 858
14 3300025935 Ga0207709_10003924 Ga0207709_100039248 858
15 3300026089 Ga0207648_10000704 Ga0207648_1000070437 858
16 3300048908 Ga0496105_0009639 Ga0496105_0009639_4474_7140 858
17 3300042876 Ga0451577_0032834 Ga0451577_0032834_540_3215 859
18 3300045051 Ga0451576_0000194 Ga0451576_0000194_4102_6777 859
19 3300026142 Ga0207698_10012090 Ga0207698_100120902 860
20 3300005844 Ga0068862_100015075 Ga0068862_1000150756 861
21 3300050496 nmdc:mga07m45_1235_c1 nmdc:mga07m45_1235_c1_8557_11226 862
22 3300035691 Ga0373931_0000608 Ga0373931_0000608_3947_6619 863
23 3300026121 Ga0207683_10070203 Ga0207683_100702031 864
24 3300005355 Ga0070671_100053199 Ga0070671_1000531992 865
25 3300009093 Ga0105240_10001696 Ga0105240_1000169635 865
26 3300025913 Ga0207695_10028606 Ga0207695_100286063 865
27 3300025914 Ga0207671_10003147 Ga0207671_100031476 865
28 3300025931 Ga0207644_10035970 Ga0207644_100359702 865
29 3300005335 Ga0070666_10001397 Ga0070666_1000139713 866
30 3300005338 Ga0068868_100007310 Ga0068868_1000073107 866
31 3300005354 Ga0070675_100001773 Ga0070675_10000177310 866
32 3300005355 Ga0070671_100003800 Ga0070671_10000380010 866
33 3300005618 Ga0068864_100010281 Ga0068864_1000102812 866
34 3300005841 Ga0068863_100009341 Ga0068863_1000093418 866
35 3300010375 Ga0105239_10001665 Ga0105239_100016659 866
36 3300013308 Ga0157375_10008022 Ga0157375_100080227 866
37 3300025903 Ga0207680_10002665 Ga0207680_100026653 866
38 3300026023 Ga0207677_10007198 Ga0207677_100071987 866
39 3300026118 Ga0207675_100006542 Ga0207675_10000654211 866
40 3300005328 Ga0070676_10011886 Ga0070676_100118863 867
41 3300005331 Ga0070670_100033234 Ga0070670_1000332343 867
42 3300005354 Ga0070675_100013049 Ga0070675_1000130494 867
43 3300005456 Ga0070678_100014466 Ga0070678_1000144662 867
44 3300005543 Ga0070672_100013786 Ga0070672_1000137863 867
45 3300009177 Ga0105248_10003839 Ga0105248_100038396 867
46 3300013296 Ga0157374_10003593 Ga0157374_100035932 867
47 3300013307 Ga0157372_10014080 Ga0157372_100140805 867
48 3300014969 Ga0157376_10007704 Ga0157376_100077042 867
49 3300025919 Ga0207657_10018066 Ga0207657_100180665 867
50 3300025933 Ga0207706_10000272 Ga0207706_1000027210 867
51 3300025935 Ga0207709_10021449 Ga0207709_100214492 867
52 3300025940 Ga0207691_10020388 Ga0207691_100203886 867
53 3300026023 Ga0207677_10010689 Ga0207677_100106891 867
54 3300026089 Ga0207648_10006743 Ga0207648_100067437 867
55 3300026118 Ga0207675_100000729 Ga0207675_10000072930 867
56 3300026121 Ga0207683_10001533 Ga0207683_1000153320 867
57 3300026142 Ga0207698_10004837 Ga0207698_100048372 867
58 3300031616 Ga0307508_10000684 Ga0307508_1000068413 867
59 3300049571 Ga0501034_0000335 Ga0501034_0000335_47922_50636 867
60 3300009545 Ga0105237_10003967 Ga0105237_100039676 868
61 3300028794 Ga0307515_10027693 Ga0307515_100276933 868
62 3300005328 Ga0070676_10001432 Ga0070676_100014328 869
63 3300005330 Ga0070690_100003415 Ga0070690_1000034158 869
64 3300005334 Ga0068869_100001571 Ga0068869_1000015718 869
65 3300005335 Ga0070666_10004237 Ga0070666_100042378 869
66 3300005347 Ga0070668_100000295 Ga0070668_10000029515 869
67 3300005353 Ga0070669_100000388 Ga0070669_10000038823 869
68 3300005354 Ga0070675_100004874 Ga0070675_1000048748 869
69 3300005356 Ga0070674_100001342 Ga0070674_1000013428 869
70 3300005367 Ga0070667_100002342 Ga0070667_10000234212 869
71 3300005459 Ga0068867_100002338 Ga0068867_1000023388 869
72 3300005543 Ga0070672_100000890 Ga0070672_10000089017 869
73 3300005617 Ga0068859_100027659 Ga0068859_1000276597 869
74 3300005618 Ga0068864_100014835 Ga0068864_1000148358 869
75 3300005718 Ga0068866_10002125 Ga0068866_100021252 869
76 3300005719 Ga0068861_100000719 Ga0068861_1000007198 869
77 3300005841 Ga0068863_100000977 Ga0068863_10000097723 869
78 3300005842 Ga0068858_100000366 Ga0068858_10000036622 869
79 3300005843 Ga0068860_100000619 Ga0068860_10000061923 869
80 3300005844 Ga0068862_100008691 Ga0068862_1000086918 869
81 3300006881 Ga0068865_100001218 Ga0068865_1000012188 869
82 3300006931 Ga0097620_100027659 Ga0097620_1000276597 869
83 3300009148 Ga0105243_10011745 Ga0105243_100117457 869
84 3300013306 Ga0163162_10004810 Ga0163162_100048107 869
85 3300013308 Ga0157375_10004535 Ga0157375_100045357 869
86 3300014326 Ga0157380_10000608 Ga0157380_100006087 869
87 3300014968 Ga0157379_10008357 Ga0157379_100083578 869
88 3300017792 Ga0163161_10000923 Ga0163161_100009237 869
89 3300025903 Ga0207680_10003785 Ga0207680_100037854 869
90 3300025907 Ga0207645_10003420 Ga0207645_100034208 869
91 3300025918 Ga0207662_10016470 Ga0207662_100164702 869
92 3300025923 Ga0207681_10001593 Ga0207681_1000159310 869
93 3300025933 Ga0207706_10005429 Ga0207706_100054297 869
94 3300025937 Ga0207669_10002711 Ga0207669_100027114 869
95 3300025938 Ga0207704_10001367 Ga0207704_100013676 869
96 3300025940 Ga0207691_10005164 Ga0207691_100051647 869
97 3300025942 Ga0207689_10001532 Ga0207689_100015327 869
98 3300025960 Ga0207651_10007979 Ga0207651_100079792 869
99 3300025972 Ga0207668_10000316 Ga0207668_1000031627 869
100 3300025986 Ga0207658_10000499 Ga0207658_1000049921 869
101 3300026035 Ga0207703_10000616 Ga0207703_1000061629 869
102 3300026088 Ga0207641_10000540 Ga0207641_1000054023 869
103 3300026089 Ga0207648_10006147 Ga0207648_100061478 869
104 3300026095 Ga0207676_10019032 Ga0207676_100190325 869
105 3300026118 Ga0207675_100005845 Ga0207675_1000058457 869
106 3300028380 Ga0268265_10001618 Ga0268265_1000161811 869
107 3300028381 Ga0268264_10001037 Ga0268264_100010375 869
108 3300028794 Ga0307515_10001095 Ga0307515_1000109512 869
109 3300031456 Ga0307513_10071135 Ga0307513_100711352 869
110 3300031649 Ga0307514_10000528 Ga0307514_1000052818 869
111 3300032002 Ga0307416_100021719 Ga0307416_1000217193 869
112 3300005539 Ga0068853_100022880 Ga0068853_1000228801 870
113 3300005543 Ga0070672_100055748 Ga0070672_1000557481 870
114 3300005843 Ga0068860_100050430 Ga0068860_1000504302 870
115 3300009093 Ga0105240_10001225 Ga0105240_1000122511 870
116 3300009177 Ga0105248_10015757 Ga0105248_100157575 870
117 3300014326 Ga0157380_10020987 Ga0157380_100209872 870
118 3300014968 Ga0157379_10006224 Ga0157379_100062249 870
119 3300025940 Ga0207691_10006006 Ga0207691_100060068 870
120 3300025941 Ga0207711_10026462 Ga0207711_100264622 870
121 3300026035 Ga0207703_10011999 Ga0207703_100119991 870
122 3300005457 Ga0070662_100000588 Ga0070662_10000058812 871
123 3300025933 Ga0207706_10000355 Ga0207706_1000035527 871
124 3300028794 Ga0307515_10000736 Ga0307515_1000073670 871
125 3300038726 Ga0400490_55764 Ga0400490_55764_29479_32184 871
126 3300039093 Ga0400489_50140 Ga0400489_50140_3363_6068 871
127 3300005367 Ga0070667_100004537 Ga0070667_1000045375 872
128 3300005617 Ga0068859_100010122 Ga0068859_10001012210 872
129 3300006931 Ga0097620_100010122 Ga0097620_10001012210 872
130 3300014325 Ga0163163_10005310 Ga0163163_100053106 872
131 3300017792 Ga0163161_10010947 Ga0163161_100109475 872
132 3300025926 Ga0207659_10003270 Ga0207659_100032702 872
133 3300003761 Ga0055535_1000123 Ga0055535_100012320 873
134 3300003763 Ga0055529_1000159 Ga0055529_100015964 873
135 3300025242 Ga0209258_100060 Ga0209258_10006018 873
136 3300025256 Ga0209759_1000282 Ga0209759_100028215 873
137 3300025272 Ga0209455_1000136 Ga0209455_100013665 873
138 iso_pu_bacteria 2565956521 2566036661 873
139 iso_pu_bacteria 2648501241 2649120400 873
140 iso_pu_bacteria 2651869818 2652972963 873
141 3300006846 Ga0075430_100018980 Ga0075430_1000189802 874
142 3300006880 Ga0075429_100000203 Ga0075429_10000020336 874
143 3300050509 nmdc:mga0qj67_7970_c1 nmdc:mga0qj67_7970_c1_558_3224 874
144 iso_pu_bacteria 2513237165 2514040896 874
145 3300039062 Ga0400483_209287 Ga0400483_209287_887_3562 875
146 3300005262 Ga0065165_1001511 Ga0065165_100151110 876
147 3300025298 Ga0209050_1000517 Ga0209050_100051731 876
148 3300025303 Ga0209051_1007746 Ga0209051_10077463 876
149 3300005333 Ga0070677_10001092 Ga0070677_100010923 878
150 3300006048 Ga0075363_100008645 Ga0075363_1000086451 878
151 3300025893 Ga0207682_10000553 Ga0207682_100005533 878
152 3300031730 Ga0307516_10002697 Ga0307516_1000269721 878
153 3300042531 Ga0450918_000147 Ga0450918_000147_5842_8520 878
154 3300031731 Ga0307405_10000872 Ga0307405_1000087211 879
155 3300031995 Ga0307409_100045320 Ga0307409_1000453202 879
156 3300032004 Ga0307414_10003084 Ga0307414_100030846 879
157 iso_pu_bacteria 2585428057 2587729723 879
158 iso_pu_bacteria 2585428058 2587734178 879
159 iso_pu_bacteria 2588253510 2588293446 879
160 iso_pu_bacteria 2643221592 2643968263 879
161 iso_pu_bacteria 2643221625 2644143584 879
162 iso_pu_bacteria 2643221648 2644272041 879
163 3300005366 Ga0070659_100000178 Ga0070659_10000017837 880
164 3300005530 Ga0070679_100007595 Ga0070679_1000075953 880
165 3300031649 Ga0307514_10029458 Ga0307514_100294582 880
166 iso_pu_bacteria 2585428062 2587756365 882
167 iso_pu_bacteria 2643221644 2644248580 882
168 iso_pu_bacteria 2643221646 2644257541 882
169 3300053156 Ga0500622_0000525 Ga0500622_0000525_19576_22242 883
170 iso_pu_bacteria 2513020051 2513226448 883
171 iso_pu_bacteria 2643221672 2644397327 883
172 iso_pu_bacteria 2818991446 2819598695 883
173 iso_pu_bacteria 2831265667 2831266597 883
174 iso_pu_bacteria 2904449895 2904453593 883
175 iso_pu_bacteria 2929520902 2929522356 883
176 3300021361 Ga0213872_10000330 Ga0213872_100003307 884
177 3300039447 Ga0436361_0182416 Ga0436361_0182416_45700_48387 884
178 3300044712 Ga0453684_0000006 Ga0453684_0000006_469358_472057 884
179 3300044712 Ga0453684_0000031 Ga0453684_0000031_261935_264631 884
180 3300048905 Ga0496102_0018503 Ga0496102_0018503_1180_3837 884
181 iso_pu_bacteria 2738541337 2739057212 884
182 3300025297 Ga0209758_1000078 Ga0209758_100007838 885
183 3300028794 Ga0307515_10030083 Ga0307515_100300838 885
184 3300045051 Ga0451576_0060041 Ga0451576_0060041_68_2749 885
185 3300049704 Ga0501221_000727 Ga0501221_000727_2450_5119 885
186 3300003215 JGI25153J46596_10006312 JGI25153J46596_100063125 886
187 3300003771 Ga0055526_1002910 Ga0055526_10029102 886
188 3300005328 Ga0070676_10013809 Ga0070676_100138093 886
189 3300005331 Ga0070670_100002714 Ga0070670_10000271416 886
190 3300005353 Ga0070669_100010849 Ga0070669_1000108493 886
191 3300005364 Ga0070673_100001336 Ga0070673_10000133611 886
192 3300005367 Ga0070667_100043582 Ga0070667_1000435823 886
193 3300005455 Ga0070663_100000397 Ga0070663_10000039714 886
194 3300005459 Ga0068867_100003163 Ga0068867_1000031638 886
195 3300005618 Ga0068864_100020422 Ga0068864_1000204224 886
196 3300006195 Ga0075366_10000256 Ga0075366_1000025622 886
197 3300006353 Ga0075370_10000830 Ga0075370_1000083012 886
198 3300006881 Ga0068865_100017766 Ga0068865_1000177663 886
199 3300010375 Ga0105239_10029089 Ga0105239_100290892 886
200 3300025245 Ga0207425_1000438 Ga0207425_10004385 886
201 3300025258 Ga0209129_1000210 Ga0209129_100021038 886
202 3300025273 Ga0209673_1008893 Ga0209673_10088932 886
203 3300025295 Ga0209564_1003418 Ga0209564_10034182 886
204 3300025297 Ga0209758_1000091 Ga0209758_1000091144 886
205 3300025303 Ga0209051_1008961 Ga0209051_10089612 886
206 3300025914 Ga0207671_10014483 Ga0207671_100144834 886
207 3300025925 Ga0207650_10022072 Ga0207650_100220723 886
208 3300025931 Ga0207644_10005715 Ga0207644_100057151 886
209 3300025933 Ga0207706_10004838 Ga0207706_100048388 886
210 3300025940 Ga0207691_10002043 Ga0207691_1000204311 886
211 3300026067 Ga0207678_10002974 Ga0207678_100029749 886
212 3300026089 Ga0207648_10002020 Ga0207648_1000202013 886
213 3300028794 Ga0307515_10000104 Ga0307515_100001044 886
214 3300028794 Ga0307515_10005856 Ga0307515_1000585614 886
215 3300030522 Ga0307512_10020656 Ga0307512_100206563 886
216 3300031456 Ga0307513_10001574 Ga0307513_1000157416 886
217 3300031507 Ga0307509_10004968 Ga0307509_100049686 886
218 3300031616 Ga0307508_10000376 Ga0307508_1000037649 886
219 3300031730 Ga0307516_10001485 Ga0307516_1000148525 886
220 3300031730 Ga0307516_10011809 Ga0307516_100118094 886
221 3300039447 Ga0436361_0471373 Ga0436361_0471373_765_3446 886
222 3300046506 Ga0495583_0000596 Ga0495583_0000596_5653_8343 886
223 3300046507 Ga0495606_0005197 Ga0495606_0005197_3067_5757 886
224 3300046616 Ga0495668_0005334 Ga0495668_0005334_3593_6283 886
225 3300046694 Ga0495649_0001161 Ga0495649_0001161_6678_9368 886
226 3300046694 Ga0495649_0003764 Ga0495649_0003764_6935_9613 886
227 3300047443 Ga0495687_014526 Ga0495687_014526_170_2848 886
228 3300048909 Ga0496106_0016812 Ga0496106_0016812_1235_3913 886
229 3300049649 Ga0501198_000047 Ga0501198_000047_26033_28696 886
230 3300049662 Ga0501222_000056 Ga0501222_000056_26034_28697 886
231 3300050493 nmdc:mga0k408_3163_c1 nmdc:mga0k408_3163_c1_1953_4622 886
232 3300050496 nmdc:mga07m45_29372_c1 nmdc:mga07m45_29372_c1_294_2984 886
233 3300050496 nmdc:mga07m45_3606_c1 nmdc:mga07m45_3606_c1_1244_3922 886
234 3300050496 nmdc:mga07m45_8762_c1 nmdc:mga07m45_8762_c1_473_3151 886
235 3300053088 Ga0500644_0002131 Ga0500644_0002131_1995_4736 886
236 3300053118 Ga0500594_0001393 Ga0500594_0001393_103_2844 886
237 3300053134 Ga0500658_0000936 Ga0500658_0000936_4484_7162 886
238 3300053136 Ga0500559_0000627 Ga0500559_0000627_11152_13893 886
239 3300053177 Ga0500636_0006303 Ga0500636_0006303_453_3146 886
240 3300053739 Ga0500587_000362 Ga0500587_000362_1373_4114 886
241 3300003761 Ga0055535_1000115 Ga0055535_10001159 887
242 3300003781 Ga0055536_1003455 Ga0055536_10034559 887
243 3300003792 Ga0055540_1000092 Ga0055540_100009223 887
244 3300003792 Ga0055540_1000582 Ga0055540_100058230 887
245 3300003794 Ga0055531_10000724 Ga0055531_100007247 887
246 3300003794 Ga0055531_10006571 Ga0055531_100065714 887
247 3300004625 Ga0055543_1000860 Ga0055543_10008609 887
248 3300005262 Ga0065165_1001737 Ga0065165_100173716 887
249 3300005353 Ga0070669_100018827 Ga0070669_1000188272 887
250 3300005354 Ga0070675_100022394 Ga0070675_1000223941 887
251 3300014497 Ga0182008_10018491 Ga0182008_100184912 887
252 3300015262 Ga0182007_10000340 Ga0182007_1000034020 887
253 3300025208 Ga0209436_101297 Ga0209436_1012977 887
254 3300025228 Ga0209672_100921 Ga0209672_1009217 887
255 3300025229 Ga0209147_100878 Ga0209147_10087813 887
256 3300025242 Ga0209258_100067 Ga0209258_10006799 887
257 3300025245 Ga0207425_1000457 Ga0207425_100045725 887
258 3300025254 Ga0209148_1000067 Ga0209148_1000067142 887
259 3300025258 Ga0209129_1000234 Ga0209129_100023445 887
260 3300025263 Ga0209565_1000148 Ga0209565_100014877 887
261 3300025273 Ga0209673_1000277 Ga0209673_100027777 887
262 3300025284 Ga0209130_1000165 Ga0209130_100016519 887
263 3300025284 Ga0209130_1002821 Ga0209130_10028213 887
264 3300025291 Ga0209675_1000178 Ga0209675_100017856 887
265 3300025292 Ga0209676_1000123 Ga0209676_100012364 887
266 3300025292 Ga0209676_1001156 Ga0209676_100115611 887
267 3300025294 Ga0209025_1000650 Ga0209025_100065045 887
268 3300025295 Ga0209564_1000307 Ga0209564_100030777 887
269 3300025297 Ga0209758_1000529 Ga0209758_100052945 887
270 3300025298 Ga0209050_1000188 Ga0209050_100018827 887
271 3300025299 Ga0209256_1000241 Ga0209256_100024177 887
272 3300025302 Ga0207426_1000303 Ga0207426_100030377 887
273 3300025303 Ga0209051_1000091 Ga0209051_100009164 887
274 3300025303 Ga0209051_1000144 Ga0209051_100014476 887
275 3300025304 Ga0209257_1000057 Ga0209257_100005722 887
276 3300025304 Ga0209257_1000586 Ga0209257_100058645 887
277 3300031548 Ga0307408_100001293 Ga0307408_1000012936 887
278 3300031901 Ga0307406_10000295 Ga0307406_100002954 887
279 3300031911 Ga0307412_10004656 Ga0307412_100046566 887
280 3300037471 Ga0395905_0008744 Ga0395905_0008744_6378_9056 887
281 3300041411 Ga0439466_0003549 Ga0439466_0003549_1791_4469 887
282 3300041413 Ga0439465_0003220 Ga0439465_0003220_1451_4129 887
283 3300041997 Ga0439431_0001289 Ga0439431_0001289_2353_5031 887
284 3300042014 Ga0439457_001827 Ga0439457_001827_1608_4286 887
285 3300048906 Ga0496103_0007447 Ga0496103_0007447_3547_6225 887
286 3300048907 Ga0496104_0020803 Ga0496104_0020803_420_3098 887
287 3300048912 Ga0496109_0014976 Ga0496109_0014976_258_2936 887
288 3300048919 Ga0496116_0030584 Ga0496116_0030584_704_3394 887
289 3300053128 Ga0500626_001710 Ga0500626_001710_2156_4846 887
290 3300003316 rootH1_10002119 rootH1_1000211924 888
291 3300003322 rootL2_10010090 rootL2_1001009010 888
292 3300053121 Ga0500607_000483 Ga0500607_000483_31449_34163 890
293 iso_pu_bacteria 2939631187 2939636189 890
294 3300049759 Ga0501262_000121 Ga0501262_000121_1943_4648 891
295 3300028786 Ga0307517_10000058 Ga0307517_10000058105 894
296 3300031616 Ga0307508_10008539 Ga0307508_100085396 894
297 3300045051 Ga0451576_0020310 Ga0451576_0020310_672_3374 894
298 3300003762 Ga0055542_1000028 Ga0055542_1000028154 898
299 3300048920 Ga0496117_0029321 Ga0496117_0029321_38_3160 898
300 3300048921 Ga0496118_0011411 Ga0496118_0011411_1113_4235 898
301 3300048920 Ga0496117_0021125 Ga0496117_0021125_1225_4008 899
302 3300002773 JGI25152J39213_1000099 JGI25152J39213_100009919 901
303 3300002774 JGI25150J39212_1001778 JGI25150J39212_10017784 901
304 3300002987 JGI25159J45721_1000611 JGI25159J45721_100061116 901
305 3300003187 JGI25151J46595_10000263 JGI25151J46595_1000026319 901
306 3300003215 JGI25153J46596_10000184 JGI25153J46596_1000018419 901
307 3300003354 JGI25160J50197_1000141 JGI25160J50197_10001418 901
308 3300003771 Ga0055526_1000156 Ga0055526_100015619 901
309 3300003773 Ga0055537_1000073 Ga0055537_100007319 901
310 3300003775 Ga0055524_1000217 Ga0055524_100021719 901
311 3300003784 Ga0055534_1000087 Ga0055534_100008719 901
312 3300003790 Ga0055528_1000130 Ga0055528_100013019 901

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13607

Succ_CoA_lig

Succinyl-CoA ligase like flavodoxin domain

293

430

0.99

PF13549

ATP-grasp_5

ATP-grasp domain

618

841

0.98

PF13380

CoA_binding_2

CoA binding domain

157

278

0.96

PF02629

CoA_binding

CoA binding domain

155

247

0.93

PF19045

Ligase_CoA_2

Ligase-CoA domain

441

595

0.81

PF00583

Acetyltransf_1

Acetyltransferase (GNAT) family

892

1010

0.77

PF13302

Acetyltransf_3

Acetyltransferase (GNAT) domain

871

1011

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
4xym-assembly1.cif.gz_B ca. korarchaeum cryptofilum dinucleotide forming acetyl-coenzyme a synthetase 1 in complex with coenzyme a, ca-ampcp and hgcl+ 0.9362 483 711
4ybz-assembly1.cif.gz_C ca. korarchaeum cryptofilum dinucleotide forming acetyl-coenzyme a synthetase 1 in complex with adp and with phosphorylated phosphohistidine segment (site i orientation) 0.9345 20 472
4y8v-assembly1.cif.gz_C ca. korarchaeum cryptofilum dinucleotide forming acetyl-coenzyme a synthetase 1 in complex with adp and additional adp bound to phosphate binding site 0.932 20 472
4yaj-assembly1.cif.gz_C ca. korarchaeum cryptofilum dinucleotide forming acetyl-coenzyme a synthetase 1 (apo form) 0.9315 20 471
4xym-assembly1.cif.gz_B ca. korarchaeum cryptofilum dinucleotide forming acetyl-coenzyme a synthetase 1 in complex with coenzyme a, ca-ampcp and hgcl+ 0.9207 483 711
ID Description Score Start End Superfamily
af_Q8IL89_166_326_3.40.50.261 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Succinyl-CoA synthetase domains 0.9727 142 301 3.40.50.261
af_P76594_4_125_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.969 18 140 3.40.50.720
af_Q58010_137_292_3.40.50.261 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Succinyl-CoA synthetase domains 0.9682 149 293 3.40.50.261
4yakB02 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.9611 515 593 3.30.1490.20
af_Q8IL89_166_326_3.40.50.261 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Succinyl-CoA synthetase domains 0.961 142 301 3.40.50.261
ID Description Score Start End GO Terms
AF-A0A354V7H1-F1-model_v4 GNAT family N-acetyltransferase 0.9839 15 246 GO:0016740
AF-A0A196SBY4-F1-model_v4 Acyl-CoA synthetase (NDP forming) 0.9755 19 189
AF-A0A662N440-F1-model_v4 acetate--CoA ligase (ADP-forming) (EC 6.2.1.13) 0.9698 21 160
AF-A0A1W9LP79-F1-model_v4 GNAT family N-acetyltransferase 0.9693 15 242 GO:0016740
AF-A0A839HML4-F1-model_v4 Bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase 0.9675 15 901 GO:0005524
GO:0016747
GO:0016874

Feature Viewer

pLDDT pTM Quality
89.76 0.87 High
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Predicted Structure (AlphaFold2)

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