F401859

General Info

Members Datasets Scaffolds Average Seq Length
312 216 624 198

Family's Representative Sequence

Representative Sequence 3300046683|Ga0495658_0362086|Ga0495658_0362086_142_777
Length 200
Sequence MSDDHPVARRNALRTEALESLLVERGLIQPEVIDTIVARFEQDIGPLNGTKLIARAWIDPAFRARLIADPWAAAEELGLATGPGHAPIVVLENTGAVHNVVVCTLCSCYPSSLLGLPPTWYKSPPYRSRVVREPRVVLREMGLDLPADVEVKVWDSSAEVRYMVLPARPAGTDGWSEEQLASLVTRDALIGVARPEAARP

Samples

Sample ID Description Type Environment
1 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
48 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
73 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
109 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
110 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
111 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
112 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
115 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
116 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
117 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
118 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
119 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
122 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
123 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
124 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
125 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
126 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
127 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
128 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
129 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
130 3300042119 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218L_E14_082316_1902 Metagenome Rhizosphere
131 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
132 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
133 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
134 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
135 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
136 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
137 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
138 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
139 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
140 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
141 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
142 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
143 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
144 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
145 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
146 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
147 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
148 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
149 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
150 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
151 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
152 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
153 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
154 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
155 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
156 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
157 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
158 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
159 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
160 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
161 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
162 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
163 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
164 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
165 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
166 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
167 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
168 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
169 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
170 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
171 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
172 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
173 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
174 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
175 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
176 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
177 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
184 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
185 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
187 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
189 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
190 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
191 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
192 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
193 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
194 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
195 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
196 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
197 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
198 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
199 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
200 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
201 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
202 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
203 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
204 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
205 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
206 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
207 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
208 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
209 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
210 3300059647 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 43R_SW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
211 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
212 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
213 2643221576 Nocardioides sp. Root614 Isolate Unclassified
214 2643221590 Nocardioides sp. Root682 Isolate Unclassified
215 2842747753 Variovorax sp. R-72060 Isolate Unclassified
216 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.76
Metatranscriptomes 0.96
Isolates 1.28

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.32
Nodule 0
Rhizoplane 1.28
Rhizosphere 94.55
Stem 0
Stem Tuber 0
Unclassified 1.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495658_0362086 3300046683 Archaea 922
2 JGI25407J50210_10014247 3300003373 Bacteria 2049
3 Ga0058860_10710293 3300004801 Bacteria 977
4 Ga0058860_12065284 3300004801 Bacteria 1686
5 Ga0070658_10130958 3300005327 Bacteria 2090
6 Ga0070683_100685154 3300005329 Bacteria 981
7 Ga0070670_100202547 3300005331 Bacteria 1725
8 Ga0070670_100862655 3300005331 Bacteria 819
9 Ga0068869_100248337 3300005334 Bacteria 1420
10 Ga0068869_100350940 3300005334 Bacteria 1202
11 Ga0070666_10396565 3300005335 Bacteria 992
12 Ga0068868_100114844 3300005338 Bacteria 2191
13 Ga0070660_100181401 3300005339 Bacteria 1703
14 Ga0070689_100182636 3300005340 Bacteria 1704
15 Ga0070692_10113007 3300005345 Bacteria 1504
16 Ga0070668_100094817 3300005347 Bacteria 2356
17 Ga0070668_100803102 3300005347 Bacteria 836
18 Ga0070669_100070450 3300005353 Bacteria 2585
19 Ga0070671_100163262 3300005355 Bacteria 1883
20 Ga0070671_100624895 3300005355 Bacteria 932
21 Ga0070674_100043975 3300005356 Bacteria 3041
22 Ga0070674_100452833 3300005356 Bacteria 1060
23 Ga0070688_100181157 3300005365 Bacteria 1461
24 Ga0070659_100041292 3300005366 Bacteria 3605
25 Ga0070659_100693020 3300005366 Bacteria 880
26 Ga0070713_100247532 3300005436 Bacteria 1625
27 Ga0070701_10059620 3300005438 Unclassified 2007
28 Ga0070701_10482328 3300005438 Bacteria 802
29 Ga0070705_100213838 3300005440 Bacteria 1331
30 Ga0070700_100551455 3300005441 Bacteria 895
31 Ga0070708_100390088 3300005445 Bacteria 1313
32 Ga0070663_100018010 3300005455 Bacteria 4622
33 Ga0070663_100494640 3300005455 Bacteria 1014
34 Ga0070663_100720343 3300005455 Bacteria 849
35 Ga0070662_100532668 3300005457 Bacteria 983
36 Ga0068867_100325447 3300005459 Bacteria 1275
37 Ga0070699_100000014 3300005518 Bacteria 218133
38 Ga0070686_100051693 3300005544 Bacteria 2617
39 Ga0070696_100005939 3300005546 Bacteria 8154
40 Ga0070665_100297204 3300005548 Bacteria 1617
41 Ga0070665_100492755 3300005548 Bacteria 1236
42 Ga0070665_100756139 3300005548 Bacteria 985
43 Ga0068857_100853372 3300005577 Bacteria 871
44 Ga0068854_100246518 3300005578 Bacteria 1425
45 Ga0068856_100202123 3300005614 Bacteria 2001
46 Ga0070702_100045259 3300005615 Bacteria 2488
47 Ga0068852_100028046 3300005616 Bacteria 4601
48 Ga0068852_100361243 3300005616 Bacteria 1420
49 Ga0068859_100021451 3300005617 Bacteria 6484
50 Ga0068859_100042132 3300005617 Bacteria 4585
51 Ga0068859_100747187 3300005617 Bacteria 1067
52 Ga0068859_101407641 3300005617 Bacteria 769
53 Ga0068864_100161759 3300005618 Bacteria 2035
54 Ga0068864_100350777 3300005618 Bacteria 1392
55 Ga0068861_100118699 3300005719 Bacteria 2131
56 Ga0068851_10053710 3300005834 Bacteria 2052
57 Ga0068863_100104289 3300005841 Bacteria 2697
58 Ga0068863_100967575 3300005841 Bacteria 853
59 Ga0068858_100120790 3300005842 Bacteria 2450
60 Ga0068860_100130211 3300005843 Bacteria 2414
61 Ga0068860_100677247 3300005843 Bacteria 1040
62 Ga0068862_100041107 3300005844 Bacteria 3933
63 Ga0068862_100548470 3300005844 Bacteria 1103
64 Ga0081455_10067908 3300005937 Bacteria 2969
65 Ga0081538_10000415 3300005981 Bacteria 48044
66 Ga0081538_10011711 3300005981 Bacteria 7083
67 Ga0081538_10022958 3300005981 Bacteria 4499
68 Ga0081538_10026705 3300005981 Bacteria 4029
69 Ga0081538_10038283 3300005981 Bacteria 3097
70 Ga0081538_10039652 3300005981 Bacteria 3017
71 Ga0081538_10043085 3300005981 Bacteria 2840
72 Ga0081538_10052074 3300005981 Bacteria 2450
73 Ga0081538_10108614 3300005981 Bacteria 1370
74 Ga0081539_10000587 3300005985 Bacteria 74473
75 Ga0081539_10055024 3300005985 Bacteria 2216
76 Ga0075365_10730691 3300006038 Bacteria 699
77 Ga0070716_100188375 3300006173 Bacteria 1361
78 Ga0075434_100269879 3300006871 Bacteria 1721
79 Ga0075436_100187084 3300006914 Bacteria 1465
80 Ga0075436_100408032 3300006914 Bacteria 985
81 Ga0097620_100021451 3300006931 Bacteria 6484
82 Ga0097620_100042129 3300006931 Bacteria 4585
83 Ga0097620_100747207 3300006931 Bacteria 1067
84 Ga0097620_101407749 3300006931 Bacteria 769
85 Ga0099795_10102050 3300007788 Bacteria 1127
86 Ga0111539_10106382 3300009094 Bacteria 3291
87 Ga0111539_10286257 3300009094 Unclassified 1918
88 Ga0105245_10858760 3300009098 Bacteria 948
89 Ga0114129_10264257 3300009147 Bacteria 2305
90 Ga0114129_10427926 3300009147 Bacteria 1740
91 Ga0114129_10700648 3300009147 Bacteria 1301
92 Ga0114129_11505371 3300009147 Bacteria 827
93 Ga0105243_10629267 3300009148 Bacteria 1037
94 Ga0105241_10115565 3300009174 Bacteria 2154
95 Ga0105237_10397504 3300009545 Bacteria 1383
96 Ga0105238_10303453 3300009551 Bacteria 1581
97 Ga0105249_10042684 3300009553 Bacteria 4126
98 Ga0105239_10051125 3300010375 Bacteria 4531
99 Ga0105246_10327111 3300011119 Bacteria 1248
100 Ga0105246_10892183 3300011119 Bacteria 797
101 Ga0157371_10106413 3300013102 Bacteria 1990
102 Ga0157378_10081076 3300013297 Bacteria 2932
103 Ga0163162_10216873 3300013306 Bacteria 2044
104 Ga0163162_10606085 3300013306 Bacteria 1221
105 Ga0157372_10267388 3300013307 Bacteria 1986
106 Ga0157375_10139423 3300013308 Unclassified 2551
107 Ga0157380_10215246 3300014326 Bacteria 1715
108 Ga0182008_10067684 3300014497 Bacteria 1757
109 Ga0157376_10181680 3300014969 Bacteria 1923
110 Ga0163161_10290580 3300017792 Bacteria 1285
111 Ga0213874_10019737 3300021377 Bacteria 1839
112 Ga0213874_10034203 3300021377 Bacteria 1486
113 Ga0207656_10099305 3300025321 Bacteria 1332
114 Ga0207642_10220697 3300025899 Bacteria 1059
115 Ga0207688_10002662 3300025901 Bacteria 9669
116 Ga0207688_10049117 3300025901 Unclassified 2357
117 Ga0207647_10077241 3300025904 Bacteria 2002
118 Ga0207645_10012707 3300025907 Bacteria 5709
119 Ga0207643_10006842 3300025908 Bacteria 6118
120 Ga0207705_10306669 3300025909 Bacteria 1218
121 Ga0207654_10998237 3300025911 Bacteria 609
122 Ga0207707_10512931 3300025912 Bacteria 1021
123 Ga0207662_10262622 3300025918 Bacteria 1137
124 Ga0207657_10176505 3300025919 Bacteria 1729
125 Ga0207657_10211220 3300025919 Bacteria 1558
126 Ga0207681_10228258 3300025923 Bacteria 1444
127 Ga0207687_10050697 3300025927 Bacteria 2890
128 Ga0207687_10350200 3300025927 Bacteria 1203
129 Ga0207644_10388769 3300025931 Bacteria 1139
130 Ga0207706_10029136 3300025933 Bacteria 4929
131 Ga0207669_10257384 3300025937 Bacteria 1303
132 Ga0207704_10110237 3300025938 Bacteria 1859
133 Ga0207689_10004732 3300025942 Bacteria 12271
134 Ga0207679_10033226 3300025945 Bacteria 3629
135 Ga0207667_10301794 3300025949 Bacteria 1636
136 Ga0207667_10322726 3300025949 Bacteria 1577
137 Ga0207712_10050548 3300025961 Bacteria 2903
138 Ga0207668_10093943 3300025972 Bacteria 2211
139 Ga0207640_10219793 3300025981 Bacteria 1454
140 Ga0207658_10194956 3300025986 Bacteria 1687
141 Ga0207703_10584985 3300026035 Bacteria 1055
142 Ga0207678_10013407 3300026067 Bacteria 7195
143 Ga0207678_10308322 3300026067 Bacteria 1361
144 Ga0207708_10009529 3300026075 Bacteria 7199
145 Ga0207708_10059134 3300026075 Bacteria 2925
146 Ga0207708_10956534 3300026075 Bacteria 743
147 Ga0207702_10639870 3300026078 Bacteria 1045
148 Ga0207648_10061132 3300026089 Bacteria 3285
149 Ga0207676_10116261 3300026095 Bacteria 2247
150 Ga0207676_10572753 3300026095 Bacteria 1081
151 Ga0207674_10345423 3300026116 Bacteria 1439
152 Ga0207675_100344262 3300026118 Bacteria 1460
153 Ga0207675_100779311 3300026118 Bacteria 969
154 Ga0207698_10817436 3300026142 Bacteria 935
155 Ga0268266_10138447 3300028379 Bacteria 2182
156 Ga0268264_10029598 3300028381 Bacteria 4487
157 Ga0307515_10169891 3300028794 Bacteria 2179
158 Ga0307408_100767825 3300031548 Bacteria 872
159 Ga0307405_10012081 3300031731 Bacteria 4555
160 Ga0307406_10567131 3300031901 Bacteria 931
161 Ga0307409_100859834 3300031995 Bacteria 918
162 Ga0307416_100015257 3300032002 Bacteria 5300
163 Ga0307414_10086860 3300032004 Bacteria 2309
164 Ga0307415_100012500 3300032126 Bacteria 4911
165 Ga0373939_0015996 3300035114 Bacteria 1972
166 Ga0373933_0502419 3300035724 Bacteria 794
167 Ga0395900_0032039 3300037418 Bacteria 5404
168 Ga0395905_0027052 3300037471 Bacteria 5409
169 Ga0395901_0247274 3300038443 Bacteria 1859
170 Ga0395901_0338073 3300038443 Bacteria 1556
171 Ga0436363_0249240 3300039450 Bacteria 6334
172 Ga0436363_1423540 3300039450 Bacteria 3970
173 Ga0439438_003959 3300041405 Bacteria 5827
174 Ga0439447_000658 3300041407 Bacteria 12801
175 Ga0439466_0001308 3300041411 Bacteria 9700
176 Ga0451853_3561031 3300041512 Bacteria 821
177 Ga0439451_030465 3300042009 Bacteria 1085
178 Ga0439452_004014 3300042010 Bacteria 5022
179 Ga0439456_068290 3300042013 Bacteria 786
180 Ga0439463_020223 3300042016 Bacteria 1660
181 Ga0450915_002747 3300042119 Bacteria 947
182 Ga0439458_0039007 3300042157 Bacteria 1148
183 Ga0439444_0002063 3300042437 Bacteria 2697
184 Ga0466963_0217919 3300044694 Bacteria 1336
185 Ga0466968_0088936 3300044735 Bacteria 1366
186 Ga0466970_0235471 3300044765 Bacteria 1024
187 Ga0466957_0100861 3300044842 Bacteria 1820
188 Ga0466959_0165117 3300045049 Bacteria 1555
189 Ga0466958_0124747 3300045836 Bacteria 1614
190 Ga0466958_0226107 3300045836 Bacteria 1194
191 Ga0495629_0459585 3300046459 Bacteria 861
192 Ga0495641_0104223 3300046461 Bacteria 1265
193 Ga0495653_0011526 3300046463 Bacteria 7221
194 Ga0495580_0011084 3300046472 Bacteria 6985
195 Ga0495582_0028812 3300046473 Bacteria 3048
196 Ga0495618_0152138 3300046514 Bacteria 1477
197 Ga0495628_0013087 3300046516 Bacteria 6985
198 Ga0495630_0106832 3300046517 Bacteria 2120
199 Ga0495632_0005917 3300046519 Bacteria 7979
200 Ga0495648_0008941 3300046524 Bacteria 7829
201 Ga0495666_0003521 3300046526 Bacteria 7903
202 Ga0495652_0014835 3300046529 Bacteria 6985
203 Ga0495665_0005242 3300046531 Bacteria 6985
204 Ga0495586_0000374 3300046535 Bacteria 27479
205 Ga0495587_0070640 3300046536 Bacteria 2032
206 Ga0495597_0226382 3300046542 Bacteria 741
207 Ga0495645_0008163 3300046543 Bacteria 7299
208 Ga0495634_0045406 3300046642 Bacteria 2970
209 Ga0495635_0038765 3300046663 Bacteria 3298
210 Ga0495599_0084360 3300046678 Bacteria 1984
211 Ga0495646_0006719 3300046680 Bacteria 7297
212 Ga0495613_0013176 3300046689 Bacteria 6143
213 Ga0495624_0008879 3300046690 Bacteria 6985
214 Ga0495660_0027988 3300046810 Bacteria 3187
215 Ga0495581_0006110 3300047315 Bacteria 6980
216 Ga0495604_0086490 3300047317 Bacteria 2337
217 Ga0495674_0016071 3300047319 Bacteria 6985
218 Ga0495676_0065530 3300047321 Bacteria 2819
219 Ga0495680_0013048 3300047322 Bacteria 7268
220 Ga0495687_000508 3300047443 Bacteria 46852
221 Ga0495679_003952 3300047446 Bacteria 6985
222 Ga0495593_0091993 3300047673 Bacteria 1561
223 Ga0495602_0017015 3300048088 Bacteria 7294
224 Ga0496109_0152414 3300048912 Bacteria 2164
225 Ga0496110_0232936 3300048913 Bacteria 1675
226 Ga0496112_0207762 3300048915 Bacteria 1916
227 Ga0496113_0122554 3300048916 Bacteria 2034
228 Ga0496121_0003367 3300048924 Bacteria 22922
229 Ga0501031_0000484 3300049568 Bacteria 23199
230 Ga0501031_0056708 3300049568 Bacteria 2552
231 Ga0501032_0104017 3300049569 Bacteria 1881
232 Ga0501033_0087999 3300049570 Bacteria 2273
233 Ga0501036_0001155 3300049572 Bacteria 20077
234 Ga0501036_0107210 3300049572 Bacteria 2362
235 Ga0501036_0107922 3300049572 Bacteria 2354
236 Ga0501036_0215753 3300049572 Bacteria 1612
237 Ga0501037_0008563 3300049573 Bacteria 7503
238 Ga0501038_0000887 3300049574 Bacteria 26527
239 Ga0501038_0024103 3300049574 Bacteria 5431
240 Ga0501038_0093588 3300049574 Bacteria 2514
241 Ga0501039_0006535 3300049575 Bacteria 8852
242 Ga0501039_0116377 3300049575 Bacteria 2092
243 Ga0501039_0354474 3300049575 Bacteria 1153
244 Ga0501040_0084522 3300049576 Bacteria 2202
245 Ga0501040_0145983 3300049576 Bacteria 1668
246 Ga0501041_0000141 3300049577 Bacteria 31658
247 Ga0501042_0000142 3300049578 Bacteria 31649
248 Ga0501042_0080559 3300049578 Bacteria 2333
249 Ga0501042_0369851 3300049578 Bacteria 1037
250 Ga0501043_0021124 3300049579 Bacteria 5103
251 Ga0501048_0004316 3300049582 Bacteria 10827
252 Ga0501068_0004114 3300049584 Bacteria 7888
253 Ga0501068_0220713 3300049584 Bacteria 1205
254 Ga0501068_0239672 3300049584 Bacteria 1154
255 Ga0501070_0080775 3300049586 Bacteria 2690
256 Ga0501071_0019607 3300049587 Bacteria 4693
257 Ga0501071_0098619 3300049587 Bacteria 2152
258 Ga0501071_0257238 3300049587 Bacteria 1318
259 Ga0501072_0000516 3300049588 Bacteria 27751
260 Ga0501072_0108796 3300049588 Bacteria 2206
261 Ga0501072_0115859 3300049588 Bacteria 2134
262 Ga0501073_0083962 3300049589 Bacteria 2216
263 Ga0501074_0005655 3300049590 Bacteria 9007
264 Ga0501074_0012048 3300049590 Bacteria 6282
265 Ga0501074_0046931 3300049590 Bacteria 3123
266 Ga0501074_0349636 3300049590 Bacteria 1049
267 Ga0501075_0000167 3300049591 Bacteria 34091
268 Ga0501075_0076780 3300049591 Bacteria 2527
269 Ga0501075_0162593 3300049591 Bacteria 1703
270 Ga0501076_0000622 3300049592 Bacteria 22648
271 Ga0501076_0049618 3300049592 Bacteria 3320
272 Ga0501076_0081942 3300049592 Bacteria 2590
273 Ga0501076_0151484 3300049592 Bacteria 1887
274 Ga0501077_0000444 3300049593 Bacteria 25064
275 Ga0501077_0061837 3300049593 Bacteria 2376
276 Ga0501077_0098741 3300049593 Bacteria 1851
277 Ga0501079_0000632 3300049741 Bacteria 23406
278 Ga0501079_0021289 3300049741 Bacteria 4960
279 Ga0501079_0122779 3300049741 Bacteria 2020
280 Ga0501079_0208490 3300049741 Bacteria 1526
281 Ga0501080_0187672 3300049742 Bacteria 1900
282 Ga0501081_0000689 3300049743 Bacteria 19513
283 Ga0501081_0090802 3300049743 Bacteria 2147
284 Ga0501035_0010870 3300049822 Bacteria 8430
285 Ga0501035_0118223 3300049822 Bacteria 2319
286 Ga0501045_0001289 3300049824 Bacteria 16621
287 Ga0501045_0016633 3300049824 Bacteria 5225
288 Ga0501045_0150422 3300049824 Bacteria 1732
289 nmdc:mga05p37_175673_c1 3300050507 Bacteria 2609
290 nmdc:mga05p37_78027_c1 3300050507 Bacteria 4078
291 nmdc:mga05p37_992003_c1 3300050507 Bacteria 893
292 nmdc:mga09592_703121_c1 3300050508 Bacteria 860
293 nmdc:mga0n895_119504_c1 3300050512 Bacteria 2656
294 nmdc:mga0n895_465716_c1 3300050512 Bacteria 1275
295 nmdc:mga0n895_557892_c1 3300050512 Bacteria 1151
296 nmdc:mga08x19_165299_c1 3300050514 Bacteria 1504
297 nmdc:mga08x19_278871_c1 3300050514 Bacteria 1158
298 nmdc:mga0a205_183920_c1 3300050515 Bacteria 1983
299 Ga0501084_0000578 3300054114 Bacteria 28035
300 Ga0501084_0015529 3300054114 Bacteria 6315
301 Ga0501084_0023791 3300054114 Bacteria 5109
302 Ga0501084_0378690 3300054114 Bacteria 1196
303 Ga0590071_015978 3300059421 Bacteria 1761
304 Ga0587079_033655 3300059647 Bacteria 999
305 Ga0501082_0004150 3300060353 Bacteria 12663
306 Ga0501082_0065136 3300060353 Bacteria 3138
307 Ga0530510_0000683 3300061734 Bacteria 21897
308 Ga0530510_0137460 3300061734 Bacteria 1799
309 2643891787 2643221576 Bacteria 5214352
310 2643960835 2643221590 Bacteria 5214697
311 2842750595 2842747753 Bacteria 5578255
312 2945976229 2945972063 Bacteria 6086495
313 Ga0495658_0362086
314 JGI25407J50210_10014247
315 Ga0058860_10710293
316 Ga0058860_12065284
317 Ga0070658_10130958
318 Ga0070683_100685154
319 Ga0070670_100202547
320 Ga0070670_100862655
321 Ga0068869_100248337
322 Ga0068869_100350940
323 Ga0070666_10396565
324 Ga0068868_100114844
325 Ga0070660_100181401
326 Ga0070689_100182636
327 Ga0070692_10113007
328 Ga0070668_100094817
329 Ga0070668_100803102
330 Ga0070669_100070450
331 Ga0070671_100163262
332 Ga0070671_100624895
333 Ga0070674_100043975
334 Ga0070674_100452833
335 Ga0070688_100181157
336 Ga0070659_100041292
337 Ga0070659_100693020
338 Ga0070713_100247532
339 Ga0070701_10059620
340 Ga0070701_10482328
341 Ga0070705_100213838
342 Ga0070700_100551455
343 Ga0070708_100390088
344 Ga0070663_100018010
345 Ga0070663_100494640
346 Ga0070663_100720343
347 Ga0070662_100532668
348 Ga0068867_100325447
349 Ga0070699_100000014
350 Ga0070686_100051693
351 Ga0070696_100005939
352 Ga0070665_100297204
353 Ga0070665_100492755
354 Ga0070665_100756139
355 Ga0068857_100853372
356 Ga0068854_100246518
357 Ga0068856_100202123
358 Ga0070702_100045259
359 Ga0068852_100028046
360 Ga0068852_100361243
361 Ga0068859_100021451
362 Ga0068859_100042132
363 Ga0068859_100747187
364 Ga0068859_101407641
365 Ga0068864_100161759
366 Ga0068864_100350777
367 Ga0068861_100118699
368 Ga0068851_10053710
369 Ga0068863_100104289
370 Ga0068863_100967575
371 Ga0068858_100120790
372 Ga0068860_100130211
373 Ga0068860_100677247
374 Ga0068862_100041107
375 Ga0068862_100548470
376 Ga0081455_10067908
377 Ga0081538_10000415
378 Ga0081538_10011711
379 Ga0081538_10022958
380 Ga0081538_10026705
381 Ga0081538_10038283
382 Ga0081538_10039652
383 Ga0081538_10043085
384 Ga0081538_10052074
385 Ga0081538_10108614
386 Ga0081539_10000587
387 Ga0081539_10055024
388 Ga0075365_10730691
389 Ga0070716_100188375
390 Ga0075434_100269879
391 Ga0075436_100187084
392 Ga0075436_100408032
393 Ga0097620_100021451
394 Ga0097620_100042129
395 Ga0097620_100747207
396 Ga0097620_101407749
397 Ga0099795_10102050
398 Ga0111539_10106382
399 Ga0111539_10286257
400 Ga0105245_10858760
401 Ga0114129_10264257
402 Ga0114129_10427926
403 Ga0114129_10700648
404 Ga0114129_11505371
405 Ga0105243_10629267
406 Ga0105241_10115565
407 Ga0105237_10397504
408 Ga0105238_10303453
409 Ga0105249_10042684
410 Ga0105239_10051125
411 Ga0105246_10327111
412 Ga0105246_10892183
413 Ga0157371_10106413
414 Ga0157378_10081076
415 Ga0163162_10216873
416 Ga0163162_10606085
417 Ga0157372_10267388
418 Ga0157375_10139423
419 Ga0157380_10215246
420 Ga0182008_10067684
421 Ga0157376_10181680
422 Ga0163161_10290580
423 Ga0213874_10019737
424 Ga0213874_10034203
425 Ga0207656_10099305
426 Ga0207642_10220697
427 Ga0207688_10002662
428 Ga0207688_10049117
429 Ga0207647_10077241
430 Ga0207645_10012707
431 Ga0207643_10006842
432 Ga0207705_10306669
433 Ga0207654_10998237
434 Ga0207707_10512931
435 Ga0207662_10262622
436 Ga0207657_10176505
437 Ga0207657_10211220
438 Ga0207681_10228258
439 Ga0207687_10050697
440 Ga0207687_10350200
441 Ga0207644_10388769
442 Ga0207706_10029136
443 Ga0207669_10257384
444 Ga0207704_10110237
445 Ga0207689_10004732
446 Ga0207679_10033226
447 Ga0207667_10301794
448 Ga0207667_10322726
449 Ga0207712_10050548
450 Ga0207668_10093943
451 Ga0207640_10219793
452 Ga0207658_10194956
453 Ga0207703_10584985
454 Ga0207678_10013407
455 Ga0207678_10308322
456 Ga0207708_10009529
457 Ga0207708_10059134
458 Ga0207708_10956534
459 Ga0207702_10639870
460 Ga0207648_10061132
461 Ga0207676_10116261
462 Ga0207676_10572753
463 Ga0207674_10345423
464 Ga0207675_100344262
465 Ga0207675_100779311
466 Ga0207698_10817436
467 Ga0268266_10138447
468 Ga0268264_10029598
469 Ga0307515_10169891
470 Ga0307408_100767825
471 Ga0307405_10012081
472 Ga0307406_10567131
473 Ga0307409_100859834
474 Ga0307416_100015257
475 Ga0307414_10086860
476 Ga0307415_100012500
477 Ga0373939_0015996
478 Ga0373933_0502419
479 Ga0395900_0032039
480 Ga0395905_0027052
481 Ga0395901_0247274
482 Ga0395901_0338073
483 Ga0436363_0249240
484 Ga0436363_1423540
485 Ga0439438_003959
486 Ga0439447_000658
487 Ga0439466_0001308
488 Ga0451853_3561031
489 Ga0439451_030465
490 Ga0439452_004014
491 Ga0439456_068290
492 Ga0439463_020223
493 Ga0450915_002747
494 Ga0439458_0039007
495 Ga0439444_0002063
496 Ga0466963_0217919
497 Ga0466968_0088936
498 Ga0466970_0235471
499 Ga0466957_0100861
500 Ga0466959_0165117
501 Ga0466958_0124747
502 Ga0466958_0226107
503 Ga0495629_0459585
504 Ga0495641_0104223
505 Ga0495653_0011526
506 Ga0495580_0011084
507 Ga0495582_0028812
508 Ga0495618_0152138
509 Ga0495628_0013087
510 Ga0495630_0106832
511 Ga0495632_0005917
512 Ga0495648_0008941
513 Ga0495666_0003521
514 Ga0495652_0014835
515 Ga0495665_0005242
516 Ga0495586_0000374
517 Ga0495587_0070640
518 Ga0495597_0226382
519 Ga0495645_0008163
520 Ga0495634_0045406
521 Ga0495635_0038765
522 Ga0495599_0084360
523 Ga0495646_0006719
524 Ga0495613_0013176
525 Ga0495624_0008879
526 Ga0495660_0027988
527 Ga0495581_0006110
528 Ga0495604_0086490
529 Ga0495674_0016071
530 Ga0495676_0065530
531 Ga0495680_0013048
532 Ga0495687_000508
533 Ga0495679_003952
534 Ga0495593_0091993
535 Ga0495602_0017015
536 Ga0496109_0152414
537 Ga0496110_0232936
538 Ga0496112_0207762
539 Ga0496113_0122554
540 Ga0496121_0003367
541 Ga0501031_0000484
542 Ga0501031_0056708
543 Ga0501032_0104017
544 Ga0501033_0087999
545 Ga0501036_0001155
546 Ga0501036_0107210
547 Ga0501036_0107922
548 Ga0501036_0215753
549 Ga0501037_0008563
550 Ga0501038_0000887
551 Ga0501038_0024103
552 Ga0501038_0093588
553 Ga0501039_0006535
554 Ga0501039_0116377
555 Ga0501039_0354474
556 Ga0501040_0084522
557 Ga0501040_0145983
558 Ga0501041_0000141
559 Ga0501042_0000142
560 Ga0501042_0080559
561 Ga0501042_0369851
562 Ga0501043_0021124
563 Ga0501048_0004316
564 Ga0501068_0004114
565 Ga0501068_0220713
566 Ga0501068_0239672
567 Ga0501070_0080775
568 Ga0501071_0019607
569 Ga0501071_0098619
570 Ga0501071_0257238
571 Ga0501072_0000516
572 Ga0501072_0108796
573 Ga0501072_0115859
574 Ga0501073_0083962
575 Ga0501074_0005655
576 Ga0501074_0012048
577 Ga0501074_0046931
578 Ga0501074_0349636
579 Ga0501075_0000167
580 Ga0501075_0076780
581 Ga0501075_0162593
582 Ga0501076_0000622
583 Ga0501076_0049618
584 Ga0501076_0081942
585 Ga0501076_0151484
586 Ga0501077_0000444
587 Ga0501077_0061837
588 Ga0501077_0098741
589 Ga0501079_0000632
590 Ga0501079_0021289
591 Ga0501079_0122779
592 Ga0501079_0208490
593 Ga0501080_0187672
594 Ga0501081_0000689
595 Ga0501081_0090802
596 Ga0501035_0010870
597 Ga0501035_0118223
598 Ga0501045_0001289
599 Ga0501045_0016633
600 Ga0501045_0150422
601 nmdc:mga05p37_175673_c1
602 nmdc:mga05p37_78027_c1
603 nmdc:mga05p37_992003_c1
604 nmdc:mga09592_703121_c1
605 nmdc:mga0n895_119504_c1
606 nmdc:mga0n895_465716_c1
607 nmdc:mga0n895_557892_c1
608 nmdc:mga08x19_165299_c1
609 nmdc:mga08x19_278871_c1
610 nmdc:mga0a205_183920_c1
611 Ga0501084_0000578
612 Ga0501084_0015529
613 Ga0501084_0023791
614 Ga0501084_0378690
615 Ga0590071_015978
616 Ga0587079_033655
617 Ga0501082_0004150
618 Ga0501082_0065136
619 Ga0530510_0000683
620 Ga0530510_0137460
621 2643891787
622 2643960835
623 2842750595
624 2945976229

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02979

NHase_alpha

Nitrile hydratase, alpha chain

9

193

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6lk7-assembly2.cif.gz_D crystal structure of os1348 from pseudomonas sp. os17 0.918 48 83
1ugs-assembly1.cif.gz_A crystal structure of ay114t mutant of co-type nitrile hydratase 0.892 15 199
1ugr-assembly1.cif.gz_A crystal structure of at109s mutant of co-type nitrile hydratase 0.8899 15 199
7sjz-assembly1.cif.gz_A-2 crystal structure of as162a mutant of co-type nitrile hydratase from pseudonocardia thermophila 0.8888 15 201
4zgj-assembly1.cif.gz_A double mutant h80a/h81a of fe-type nitrile hydratase from comamonas testosteroni ni1 0.8867 18 202
ID Description Score Start End Superfamily
4ob0A00 Alpha Beta;Alpha-Beta Complex;Nitrile Hydratase; Chain A;Nitrile hydratase alpha /Thiocyanate hydrolase gamma 0.8847 15 201 3.90.330.10
4fm4G00 Alpha Beta;Alpha-Beta Complex;Nitrile Hydratase; Chain A;Nitrile hydratase alpha /Thiocyanate hydrolase gamma 0.8744 18 202 3.90.330.10
2zcfA00 Alpha Beta;Alpha-Beta Complex;Nitrile Hydratase; Chain A;Nitrile hydratase alpha /Thiocyanate hydrolase gamma 0.8519 7 202 3.90.330.10
2zcfA00 Alpha Beta;Alpha-Beta Complex;Nitrile Hydratase; Chain A;Nitrile hydratase alpha /Thiocyanate hydrolase gamma 0.8397 7 202 3.90.330.10
4ob0A00 Alpha Beta;Alpha-Beta Complex;Nitrile Hydratase; Chain A;Nitrile hydratase alpha /Thiocyanate hydrolase gamma 0.8189 15 201 3.90.330.10
ID Description Score Start End GO Terms
AF-A0A7R9WNZ3-F1-model_v4 Nitrile hydratase alpha/Thiocyanate hydrolase gamma domain-containing protein 0.9913 92 199 GO:0003824
GO:0016020
GO:0046914
AF-A0A813VXB3-F1-model_v4 Elongation of very long chain fatty acids protein (EC 2.3.1.199) (Very-long-chain 3-oxoacyl-CoA synthase) 0.9867 92 199 GO:0005789
GO:0009922
GO:0019367
GO:0030148
GO:0034625
GO:0034626
GO:0042761
GO:0046914
AF-Q6A3Q1-F1-model_v4 Putative nitrile hydratase alpha subunit 0.9854 109 180 GO:0003824
GO:0046914
AF-A0A387FU55-F1-model_v4 Nitrile hydratase subunit beta 0.985 95 162 GO:0003824
GO:0046914
AF-A0A434LK25-F1-model_v4 Nitrile hydratase subunit alpha 0.9838 64 199 GO:0003824
GO:0046914

Map