F401739

General Info

Members Datasets Scaffolds Average Seq Length
312 191 624 660

Family's Representative Sequence

Representative Sequence 3300025921|Ga0207652_10060891|Ga0207652_100608911
Length 740
Sequence MDHITHHEHEPAVPHSGRGISGAHASHDPHAGHTVAMFRDKFWLSFALTIPVVFWSTDVQHWLGYTAPSFPGSKFIPAILGTVVFVYGGLVFVRGASSELADRKPGMMTLISLAIIVAFGTSLAATFGLFEVDVWWELASLITIMVLGHWLEMRAISQARGALNALAALLPDTAERVTGAETQVVPLSDLRIGDIVLVRPGARVPADGTVVEGAADVDESMITGESKPLPKVAGAKVIAGTVISGGSLHVSISAIGDQTALSGIMRLVAAAQASGSRAQALADRAAAILFYVAVASGAITFAYWWFSGDKEHALIRTATVLVIACPHALGLAIPLVIAISTSLGAQNGLLVKDRLALERARNLDMVIFDKTGTLTRGSPAVSGVAAAPGTTEDDLIARAAAVESTSEHPLAKAIVAEGARRGLTRLAATNFEALPGRGAKALVEGMSVEIGGPRLVTEGKVTVPPEVEKLTTAWASDGKTVLYALAQGRLLGAFAVEDEIRPESSEAVAELHRLGVRVAMITGDSKAVADSVARRIGIDEVAAEVLPADKAASVKKFQAGGKRVAMVGDGVNDAPALATADVGIAIGAGTDVAIESAGIVLVRSDPRDVVGAIELSRATYRKMIQNLVWATAYNIVAIPVAAGLFVHWGFDLPMSVGAVAMSLSTIIVAANAQLLRGLKLQTTPCALSVDPMAGKPGEGQRRSGTSGSIPNEPAPDARLRPAGAGQKRFLARRPGTPPFH

Samples

Sample ID Description Type Environment
1 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
103 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
104 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
105 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
106 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
107 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
108 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
109 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
110 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
111 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
112 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
113 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
114 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
115 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
116 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
117 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
118 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
121 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
122 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
123 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
124 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
125 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
126 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
127 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
128 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
129 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
130 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
131 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
132 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
133 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
134 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
135 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
136 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
137 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
138 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
139 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
140 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
141 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
142 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
143 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
144 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
145 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
146 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
150 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
151 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
152 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
167 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
168 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
169 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
170 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
171 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
172 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
173 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
174 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
175 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
178 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
179 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
180 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
181 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
182 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
183 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
184 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
185 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
186 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
187 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
188 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
189 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
190 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
191 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.68
Metatranscriptomes 0.32
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.92
Nodule 0
Rhizoplane 2.88
Rhizosphere 95.19
Stem 0
Stem Tuber 0
Unclassified 1.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207652_10060891 3300025921 Bacteria 3258
2 Ga0070658_10009515 3300005327 Bacteria 7805
3 Ga0070683_100085452 3300005329 Bacteria 2958
4 Ga0070690_100004798 3300005330 Bacteria 7544
5 Ga0070660_100019774 3300005339 Bacteria 4940
6 Ga0070671_100000916 3300005355 Bacteria 21537
7 Ga0070673_100000304 3300005364 Bacteria 25761
8 Ga0070673_100063797 3300005364 Bacteria 2933
9 Ga0070667_100025388 3300005367 Bacteria 4926
10 Ga0070703_10000549 3300005406 Bacteria 13919
11 Ga0070713_100002350 3300005436 Bacteria 12343
12 Ga0070701_10024068 3300005438 Bacteria 2942
13 Ga0070711_100005053 3300005439 Bacteria 7855
14 Ga0070711_100024310 3300005439 Bacteria 3951
15 Ga0070694_100023310 3300005444 Bacteria 3979
16 Ga0070708_100004118 3300005445 Bacteria 11412
17 Ga0070708_100006505 3300005445 Bacteria 9296
18 Ga0070708_100009250 3300005445 Bacteria 7942
19 Ga0070708_100034073 3300005445 Bacteria 4428
20 Ga0070708_100114292 3300005445 Bacteria 2484
21 Ga0070681_10002260 3300005458 Bacteria 17591
22 Ga0070681_10013801 3300005458 Bacteria 8041
23 Ga0070681_10018938 3300005458 Bacteria 6889
24 Ga0070681_10125616 3300005458 Bacteria 2498
25 Ga0070706_100001822 3300005467 Bacteria 22093
26 Ga0070706_100007276 3300005467 Bacteria 10391
27 Ga0070706_100009494 3300005467 Bacteria 9048
28 Ga0070706_100024325 3300005467 Bacteria 5575
29 Ga0070707_100001706 3300005468 Bacteria 21190
30 Ga0070707_100003525 3300005468 Bacteria 14775
31 Ga0070707_100003957 3300005468 Bacteria 13952
32 Ga0070707_100004407 3300005468 Bacteria 13195
33 Ga0070707_100025929 3300005468 Bacteria 5563
34 Ga0070698_100010302 3300005471 Bacteria 9978
35 Ga0070699_100001528 3300005518 Bacteria 21160
36 Ga0070699_100006918 3300005518 Bacteria 9862
37 Ga0070699_100031381 3300005518 Bacteria 4586
38 Ga0070699_100042070 3300005518 Bacteria 3953
39 Ga0070699_100044990 3300005518 Bacteria 3820
40 Ga0070699_100066989 3300005518 Bacteria 3118
41 Ga0070679_100003496 3300005530 Bacteria 14381
42 Ga0070684_100014371 3300005535 Bacteria 6411
43 Ga0070684_100080395 3300005535 Bacteria 2883
44 Ga0070697_100000527 3300005536 Bacteria 28763
45 Ga0070697_100005660 3300005536 Bacteria 9620
46 Ga0070697_100007052 3300005536 Bacteria 8734
47 Ga0070697_100017538 3300005536 Bacteria 5635
48 Ga0070697_100031339 3300005536 Bacteria 4276
49 Ga0070697_100042834 3300005536 Bacteria 3664
50 Ga0070697_100064115 3300005536 Bacteria 3001
51 Ga0070695_100010138 3300005545 Bacteria 5618
52 Ga0070695_100010816 3300005545 Bacteria 5452
53 Ga0070696_100010746 3300005546 Bacteria 6131
54 Ga0070696_100071685 3300005546 Bacteria 2438
55 Ga0070665_100001770 3300005548 Bacteria 24606
56 Ga0068855_100006204 3300005563 Bacteria 14570
57 Ga0068855_100029426 3300005563 Bacteria 6566
58 Ga0070664_100004822 3300005564 Bacteria 10806
59 Ga0068856_100005674 3300005614 Bacteria 12292
60 Ga0068852_100005225 3300005616 Bacteria 9260
61 Ga0068864_100000198 3300005618 Bacteria 54959
62 Ga0068870_10033239 3300005840 Bacteria 2630
63 Ga0068863_100047635 3300005841 Unclassified 4066
64 Ga0068858_100001204 3300005842 Bacteria 26806
65 Ga0068860_100003961 3300005843 Bacteria 15207
66 Ga0081455_10011007 3300005937 Bacteria 9115
67 Ga0070717_10002041 3300006028 Bacteria 14141
68 Ga0070717_10007490 3300006028 Bacteria 8108
69 Ga0075365_10087541 3300006038 Bacteria 2118
70 Ga0075364_10010270 3300006051 Bacteria 5651
71 Ga0070715_10004761 3300006163 Bacteria 4487
72 Ga0070716_100011956 3300006173 Bacteria 4385
73 Ga0070716_100014778 3300006173 Bacteria 4004
74 Ga0070712_100030492 3300006175 Bacteria 3624
75 Ga0075362_10004619 3300006177 Bacteria 4963
76 Ga0075428_100001155 3300006844 Bacteria 28251
77 Ga0075428_100016979 3300006844 Bacteria 8041
78 Ga0075428_100061361 3300006844 Bacteria 4117
79 Ga0075430_100000615 3300006846 Bacteria 27160
80 Ga0075431_100002022 3300006847 Bacteria 19365
81 Ga0075431_100060671 3300006847 Bacteria 3902
82 Ga0075433_10006835 3300006852 Bacteria 9042
83 Ga0075434_100007837 3300006871 Bacteria 9894
84 Ga0075434_100035588 3300006871 Bacteria 4923
85 Ga0075429_100003893 3300006880 Bacteria 12748
86 Ga0075435_100013076 3300007076 Bacteria 6164
87 Ga0075435_100033866 3300007076 Bacteria 4043
88 Ga0099794_10003822 3300007265 Bacteria 5817
89 Ga0099794_10016904 3300007265 Bacteria 3243
90 Ga0105240_10060214 3300009093 Bacteria 4734
91 Ga0105247_10007710 3300009101 Bacteria 6587
92 Ga0114129_10001239 3300009147 Bacteria 34001
93 Ga0114129_10104245 3300009147 Bacteria 3919
94 Ga0105241_10077201 3300009174 Bacteria 2599
95 Ga0105242_10004396 3300009176 Bacteria 10961
96 Ga0105238_10007291 3300009551 Bacteria 11068
97 Ga0105238_10018471 3300009551 Bacteria 7096
98 Ga0105239_10069747 3300010375 Bacteria 3861
99 Ga0105246_10072904 3300011119 Bacteria 2422
100 Ga0157370_10010635 3300013104 Bacteria 9685
101 Ga0157369_10029741 3300013105 Bacteria 6034
102 Ga0157378_10001749 3300013297 Bacteria 19473
103 Ga0157372_10012727 3300013307 Bacteria 8964
104 Ga0163163_10000315 3300014325 Bacteria 47040
105 Ga0163163_10036674 3300014325 Bacteria 4764
106 Ga0157379_10006896 3300014968 Bacteria 9824
107 Ga0157376_10063896 3300014969 Bacteria 3102
108 Ga0207653_10000238 3300025885 Bacteria 36578
109 Ga0207710_10019606 3300025900 Bacteria 2886
110 Ga0207680_10001785 3300025903 Bacteria 10157
111 Ga0207647_10001557 3300025904 Bacteria 17625
112 Ga0207684_10000307 3300025910 Bacteria 69402
113 Ga0207684_10010348 3300025910 Bacteria 8211
114 Ga0207684_10026994 3300025910 Bacteria 4896
115 Ga0207684_10034073 3300025910 Bacteria 4328
116 Ga0207684_10061604 3300025910 Bacteria 3186
117 Ga0207654_10009360 3300025911 Bacteria 4975
118 Ga0207707_10030105 3300025912 Bacteria 4746
119 Ga0207707_10048938 3300025912 Bacteria 3683
120 Ga0207695_10001495 3300025913 Bacteria 38982
121 Ga0207693_10004983 3300025915 Bacteria 11148
122 Ga0207663_10017505 3300025916 Bacteria 3995
123 Ga0207657_10007194 3300025919 Bacteria 11425
124 Ga0207652_10007916 3300025921 Bacteria 8530
125 Ga0207646_10001038 3300025922 Bacteria 35444
126 Ga0207646_10002069 3300025922 Bacteria 24058
127 Ga0207646_10003220 3300025922 Bacteria 18631
128 Ga0207646_10003265 3300025922 Bacteria 18479
129 Ga0207646_10006766 3300025922 Bacteria 11799
130 Ga0207646_10007297 3300025922 Bacteria 11262
131 Ga0207646_10015033 3300025922 Bacteria 7325
132 Ga0207694_10056273 3300025924 Bacteria 3054
133 Ga0207687_10003431 3300025927 Bacteria 10686
134 Ga0207700_10002547 3300025928 Bacteria 10462
135 Ga0207700_10011029 3300025928 Bacteria 5740
136 Ga0207700_10015264 3300025928 Bacteria 5058
137 Ga0207644_10063645 3300025931 Bacteria 2678
138 Ga0207686_10063538 3300025934 Bacteria 2348
139 Ga0207665_10011131 3300025939 Bacteria 5903
140 Ga0207665_10018497 3300025939 Bacteria 4577
141 Ga0207711_10000608 3300025941 Bacteria 36110
142 Ga0207661_10086039 3300025944 Bacteria 2608
143 Ga0207679_10010933 3300025945 Bacteria 5857
144 Ga0207667_10000199 3300025949 Bacteria 87200
145 Ga0207651_10010058 3300025960 Bacteria 5219
146 Ga0207668_10029513 3300025972 Bacteria 3595
147 Ga0207677_10000946 3300026023 Bacteria 16195
148 Ga0207703_10000458 3300026035 Bacteria 42948
149 Ga0207702_10099287 3300026078 Bacteria 2566
150 Ga0207641_10002772 3300026088 Bacteria 15962
151 Ga0207648_10061235 3300026089 Bacteria 3282
152 Ga0207676_10000054 3300026095 Bacteria 128222
153 Ga0207674_10104946 3300026116 Bacteria 2804
154 Ga0207698_10005466 3300026142 Bacteria 7857
155 Ga0209998_10000688 3300027717 Bacteria 9011
156 Ga0209974_10003801 3300027876 Bacteria 5409
157 Ga0268266_10059749 3300028379 Bacteria 3284
158 Ga0268264_10006710 3300028381 Bacteria 9672
159 Ga0265760_10000674 3300031090 Bacteria 9722
160 Ga0316576_10013735 3300031727 Bacteria 5392
161 Ga0316578_10007138 3300031728 Bacteria 5575
162 Ga0373934_0015208 3300035086 Bacteria 2918
163 Ga0373953_0002112 3300035117 Bacteria 5936
164 Ga0373953_0014288 3300035117 Unclassified 2853
165 Ga0373954_0000982 3300035118 Bacteria 11232
166 Ga0373956_0002650 3300035119 Bacteria 7249
167 Ga0373956_0030575 3300035119 Unclassified 2355
168 Ga0373955_0004096 3300035172 Bacteria 6438
169 Ga0316574_0003969 3300035398 Bacteria 7701
170 Ga0373927_0026955 3300035695 Bacteria 3755
171 Ga0373947_0052220 3300035725 Bacteria 2462
172 Ga0373937_0000026 3300036401 Bacteria 124071
173 Ga0373937_0010232 3300036401 Bacteria 8185
174 Ga0373937_0045865 3300036401 Bacteria 3995
175 Ga0373937_0070156 3300036401 Bacteria 3232
176 Ga0373925_0006914 3300037068 Bacteria 8299
177 Ga0373925_0047113 3300037068 Bacteria 3208
178 Ga0395899_0001635 3300037312 Bacteria 18688
179 Ga0395900_0035043 3300037418 Bacteria 5169
180 Ga0395900_0049683 3300037418 Bacteria 4321
181 Ga0395900_0124075 3300037418 Bacteria 2649
182 Ga0395898_0008164 3300037466 Bacteria 11085
183 Ga0395905_0095952 3300037471 Bacteria 2784
184 Ga0395901_0000766 3300038443 Bacteria 36024
185 Ga0439438_012088 3300041405 Bacteria 2660
186 Ga0439439_0000973 3300041406 Bacteria 5365
187 Ga0439461_0001503 3300041410 Bacteria 3616
188 Ga0439466_0000969 3300041411 Bacteria 11037
189 Ga0439432_007587 3300042006 Bacteria 3836
190 Ga0439452_000706 3300042010 Bacteria 16293
191 Ga0439457_000738 3300042014 Bacteria 9731
192 Ga0439446_0001984 3300042156 Bacteria 4834
193 Ga0450909_001300 3300042185 Bacteria 3474
194 Ga0439434_0000656 3300042435 Bacteria 9927
195 Ga0450918_000219 3300042531 Bacteria 13064
196 Ga0451576_0018906 3300045051 Bacteria 7531
197 Ga0451576_0057831 3300045051 Bacteria 4053
198 Ga0495580_0001168 3300046472 Bacteria 23092
199 Ga0495580_0002060 3300046472 Bacteria 17664
200 Ga0495580_0004884 3300046472 Bacteria 11209
201 Ga0495582_0007993 3300046473 Bacteria 5843
202 Ga0495639_0003232 3300046475 Bacteria 7083
203 Ga0495664_0013537 3300046477 Bacteria 4627
204 Ga0495618_0034403 3300046514 Bacteria 3177
205 Ga0495665_0006965 3300046531 Bacteria 6098
206 Ga0495587_0047785 3300046536 Bacteria 2537
207 Ga0495645_0002388 3300046543 Bacteria 12745
208 Ga0495588_0010632 3300046674 Bacteria 4288
209 Ga0495657_0010067 3300046675 Bacteria 7128
210 Ga0495604_0072881 3300047317 Unclassified 2594
211 Ga0495684_0001380 3300047471 Bacteria 19489
212 Ga0495602_0018410 3300048088 Bacteria 6977
213 Ga0495602_0095723 3300048088 Unclassified 2450
214 Ga0496104_0004928 3300048907 Bacteria 11645
215 Ga0496105_0004533 3300048908 Bacteria 10467
216 Ga0496110_0007934 3300048913 Bacteria 8505
217 Ga0496112_0000773 3300048915 Bacteria 22520
218 Ga0496112_0005283 3300048915 Bacteria 11138
219 Ga0496113_0015681 3300048916 Bacteria 5218
220 Ga0496114_0041979 3300048917 Bacteria 3790
221 Ga0496114_0065723 3300048917 Bacteria 3039
222 Ga0496115_0048028 3300048918 Bacteria 3414
223 Ga0501031_0012964 3300049568 Bacteria 5441
224 Ga0501033_0069418 3300049570 Bacteria 2590
225 Ga0501034_0000024 3300049571 Bacteria 263735
226 Ga0501034_0010642 3300049571 Bacteria 9564
227 Ga0501034_0023671 3300049571 Bacteria 6255
228 Ga0501034_0046512 3300049571 Bacteria 4384
229 Ga0501036_0017897 3300049572 Bacteria 5932
230 Ga0501036_0041225 3300049572 Bacteria 3906
231 Ga0501036_0063194 3300049572 Bacteria 3135
232 Ga0501036_0080925 3300049572 Bacteria 2745
233 Ga0501037_0025401 3300049573 Bacteria 4378
234 Ga0501038_0040467 3300049574 Bacteria 4070
235 Ga0501039_0003512 3300049575 Bacteria 11738
236 Ga0501040_0003982 3300049576 Bacteria 9594
237 Ga0501040_0015794 3300049576 Bacteria 4990
238 Ga0501040_0040741 3300049576 Bacteria 3161
239 Ga0501041_0002788 3300049577 Bacteria 9975
240 Ga0501041_0016705 3300049577 Bacteria 4367
241 Ga0501041_0046106 3300049577 Bacteria 2651
242 Ga0501042_0003890 3300049578 Bacteria 9445
243 Ga0501042_0005981 3300049578 Bacteria 7876
244 Ga0501042_0016066 3300049578 Bacteria 5135
245 Ga0501043_0037157 3300049579 Bacteria 3831
246 Ga0501046_0014140 3300049580 Bacteria 6740
247 Ga0501046_0015896 3300049580 Bacteria 6313
248 Ga0501046_0060855 3300049580 Bacteria 2954
249 Ga0501047_0029003 3300049581 Bacteria 5338
250 Ga0501048_0018542 3300049582 Bacteria 5116
251 Ga0501067_0008608 3300049583 Bacteria 5656
252 Ga0501068_0001706 3300049584 Bacteria 11694
253 Ga0501068_0020215 3300049584 Bacteria 3876
254 Ga0501068_0041097 3300049584 Bacteria 2778
255 Ga0501069_0007576 3300049585 Bacteria 5697
256 Ga0501071_0001264 3300049587 Bacteria 14339
257 Ga0501071_0034704 3300049587 Bacteria 3591
258 Ga0501072_0002050 3300049588 Bacteria 14984
259 Ga0501072_0025399 3300049588 Bacteria 4615
260 Ga0501072_0040728 3300049588 Bacteria 3648
261 Ga0501072_0054758 3300049588 Bacteria 3143
262 Ga0501072_0099968 3300049588 Bacteria 2305
263 Ga0501073_0047717 3300049589 Bacteria 3009
264 Ga0501075_0003706 3300049591 Bacteria 10261
265 Ga0501075_0016475 3300049591 Bacteria 5324
266 Ga0501076_0002265 3300049592 Bacteria 13164
267 Ga0501076_0003640 3300049592 Bacteria 10830
268 Ga0501076_0017682 3300049592 Bacteria 5419
269 Ga0501076_0030686 3300049592 Bacteria 4187
270 Ga0501076_0035515 3300049592 Bacteria 3899
271 Ga0501077_0001836 3300049593 Bacteria 12847
272 Ga0501077_0020476 3300049593 Bacteria 4187
273 Ga0501079_0007967 3300049741 Bacteria 8028
274 Ga0501079_0060378 3300049741 Bacteria 2924
275 Ga0501080_0000520 3300049742 Bacteria 30275
276 Ga0501080_0015001 3300049742 Bacteria 7136
277 Ga0501080_0020102 3300049742 Bacteria 6179
278 Ga0501080_0053541 3300049742 Bacteria 3758
279 Ga0501081_0001397 3300049743 Bacteria 14726
280 Ga0501081_0014657 3300049743 Bacteria 5173
281 Ga0501081_0045731 3300049743 Bacteria 3006
282 Ga0501081_0050328 3300049743 Bacteria 2870
283 Ga0501081_0083395 3300049743 Bacteria 2240
284 Ga0501045_0006628 3300049824 Bacteria 8025
285 Ga0501045_0013883 3300049824 Bacteria 5697
286 Ga0501045_0025645 3300049824 Bacteria 4239
287 Ga0501045_0044142 3300049824 Bacteria 3246
288 nmdc:mga00v17_1244_c1 3300050491 Bacteria 13338
289 nmdc:mga05p37_12682_c1 3300050507 Bacteria 10070
290 nmdc:mga05p37_725_c1 3300050507 Bacteria 36572
291 nmdc:mga09592_117000_c1 3300050508 Bacteria 2288
292 nmdc:mga09592_2123_c1 3300050508 Bacteria 16008
293 nmdc:mga09592_925_c1 3300050508 Bacteria 23011
294 nmdc:mga06r32_7179_c1 3300050510 Bacteria 10042
295 nmdc:mga0n895_11911_c1 3300050512 Bacteria 7782
296 nmdc:mga0n895_3326_c1 3300050512 Bacteria 12920
297 nmdc:mga0rr50_11219_c1 3300050513 Bacteria 5722
298 nmdc:mga0a205_5075_c1 3300050515 Bacteria 11837
299 Ga0495601_0005870 3300053077 Bacteria 7157
300 Ga0500556_0000001 3300053104 Bacteria 1135060
301 Ga0500570_000458 3300053724 Bacteria 15714
302 Ga0501084_0007168 3300054114 Bacteria 9183
303 Ga0501084_0007186 3300054114 Bacteria 9175
304 Ga0501084_0036926 3300054114 Bacteria 4082
305 Ga0501082_0005815 3300060353 Bacteria 10708
306 Ga0501082_0011116 3300060353 Bacteria 7740
307 Ga0501082_0014621 3300060353 Bacteria 6759
308 Ga0501082_0077437 3300060353 Bacteria 2867
309 Ga0530510_0003356 3300061734 Bacteria 11014
310 Ga0530510_0004394 3300061734 Bacteria 9759
311 Ga0530510_0006831 3300061734 Bacteria 7952
312 Ga0530510_0007764 3300061734 Bacteria 7476
313 Ga0207652_10060891
314 Ga0070658_10009515
315 Ga0070683_100085452
316 Ga0070690_100004798
317 Ga0070660_100019774
318 Ga0070671_100000916
319 Ga0070673_100000304
320 Ga0070673_100063797
321 Ga0070667_100025388
322 Ga0070703_10000549
323 Ga0070713_100002350
324 Ga0070701_10024068
325 Ga0070711_100005053
326 Ga0070711_100024310
327 Ga0070694_100023310
328 Ga0070708_100004118
329 Ga0070708_100006505
330 Ga0070708_100009250
331 Ga0070708_100034073
332 Ga0070708_100114292
333 Ga0070681_10002260
334 Ga0070681_10013801
335 Ga0070681_10018938
336 Ga0070681_10125616
337 Ga0070706_100001822
338 Ga0070706_100007276
339 Ga0070706_100009494
340 Ga0070706_100024325
341 Ga0070707_100001706
342 Ga0070707_100003525
343 Ga0070707_100003957
344 Ga0070707_100004407
345 Ga0070707_100025929
346 Ga0070698_100010302
347 Ga0070699_100001528
348 Ga0070699_100006918
349 Ga0070699_100031381
350 Ga0070699_100042070
351 Ga0070699_100044990
352 Ga0070699_100066989
353 Ga0070679_100003496
354 Ga0070684_100014371
355 Ga0070684_100080395
356 Ga0070697_100000527
357 Ga0070697_100005660
358 Ga0070697_100007052
359 Ga0070697_100017538
360 Ga0070697_100031339
361 Ga0070697_100042834
362 Ga0070697_100064115
363 Ga0070695_100010138
364 Ga0070695_100010816
365 Ga0070696_100010746
366 Ga0070696_100071685
367 Ga0070665_100001770
368 Ga0068855_100006204
369 Ga0068855_100029426
370 Ga0070664_100004822
371 Ga0068856_100005674
372 Ga0068852_100005225
373 Ga0068864_100000198
374 Ga0068870_10033239
375 Ga0068863_100047635
376 Ga0068858_100001204
377 Ga0068860_100003961
378 Ga0081455_10011007
379 Ga0070717_10002041
380 Ga0070717_10007490
381 Ga0075365_10087541
382 Ga0075364_10010270
383 Ga0070715_10004761
384 Ga0070716_100011956
385 Ga0070716_100014778
386 Ga0070712_100030492
387 Ga0075362_10004619
388 Ga0075428_100001155
389 Ga0075428_100016979
390 Ga0075428_100061361
391 Ga0075430_100000615
392 Ga0075431_100002022
393 Ga0075431_100060671
394 Ga0075433_10006835
395 Ga0075434_100007837
396 Ga0075434_100035588
397 Ga0075429_100003893
398 Ga0075435_100013076
399 Ga0075435_100033866
400 Ga0099794_10003822
401 Ga0099794_10016904
402 Ga0105240_10060214
403 Ga0105247_10007710
404 Ga0114129_10001239
405 Ga0114129_10104245
406 Ga0105241_10077201
407 Ga0105242_10004396
408 Ga0105238_10007291
409 Ga0105238_10018471
410 Ga0105239_10069747
411 Ga0105246_10072904
412 Ga0157370_10010635
413 Ga0157369_10029741
414 Ga0157378_10001749
415 Ga0157372_10012727
416 Ga0163163_10000315
417 Ga0163163_10036674
418 Ga0157379_10006896
419 Ga0157376_10063896
420 Ga0207653_10000238
421 Ga0207710_10019606
422 Ga0207680_10001785
423 Ga0207647_10001557
424 Ga0207684_10000307
425 Ga0207684_10010348
426 Ga0207684_10026994
427 Ga0207684_10034073
428 Ga0207684_10061604
429 Ga0207654_10009360
430 Ga0207707_10030105
431 Ga0207707_10048938
432 Ga0207695_10001495
433 Ga0207693_10004983
434 Ga0207663_10017505
435 Ga0207657_10007194
436 Ga0207652_10007916
437 Ga0207646_10001038
438 Ga0207646_10002069
439 Ga0207646_10003220
440 Ga0207646_10003265
441 Ga0207646_10006766
442 Ga0207646_10007297
443 Ga0207646_10015033
444 Ga0207694_10056273
445 Ga0207687_10003431
446 Ga0207700_10002547
447 Ga0207700_10011029
448 Ga0207700_10015264
449 Ga0207644_10063645
450 Ga0207686_10063538
451 Ga0207665_10011131
452 Ga0207665_10018497
453 Ga0207711_10000608
454 Ga0207661_10086039
455 Ga0207679_10010933
456 Ga0207667_10000199
457 Ga0207651_10010058
458 Ga0207668_10029513
459 Ga0207677_10000946
460 Ga0207703_10000458
461 Ga0207702_10099287
462 Ga0207641_10002772
463 Ga0207648_10061235
464 Ga0207676_10000054
465 Ga0207674_10104946
466 Ga0207698_10005466
467 Ga0209998_10000688
468 Ga0209974_10003801
469 Ga0268266_10059749
470 Ga0268264_10006710
471 Ga0265760_10000674
472 Ga0316576_10013735
473 Ga0316578_10007138
474 Ga0373934_0015208
475 Ga0373953_0002112
476 Ga0373953_0014288
477 Ga0373954_0000982
478 Ga0373956_0002650
479 Ga0373956_0030575
480 Ga0373955_0004096
481 Ga0316574_0003969
482 Ga0373927_0026955
483 Ga0373947_0052220
484 Ga0373937_0000026
485 Ga0373937_0010232
486 Ga0373937_0045865
487 Ga0373937_0070156
488 Ga0373925_0006914
489 Ga0373925_0047113
490 Ga0395899_0001635
491 Ga0395900_0035043
492 Ga0395900_0049683
493 Ga0395900_0124075
494 Ga0395898_0008164
495 Ga0395905_0095952
496 Ga0395901_0000766
497 Ga0439438_012088
498 Ga0439439_0000973
499 Ga0439461_0001503
500 Ga0439466_0000969
501 Ga0439432_007587
502 Ga0439452_000706
503 Ga0439457_000738
504 Ga0439446_0001984
505 Ga0450909_001300
506 Ga0439434_0000656
507 Ga0450918_000219
508 Ga0451576_0018906
509 Ga0451576_0057831
510 Ga0495580_0001168
511 Ga0495580_0002060
512 Ga0495580_0004884
513 Ga0495582_0007993
514 Ga0495639_0003232
515 Ga0495664_0013537
516 Ga0495618_0034403
517 Ga0495665_0006965
518 Ga0495587_0047785
519 Ga0495645_0002388
520 Ga0495588_0010632
521 Ga0495657_0010067
522 Ga0495604_0072881
523 Ga0495684_0001380
524 Ga0495602_0018410
525 Ga0495602_0095723
526 Ga0496104_0004928
527 Ga0496105_0004533
528 Ga0496110_0007934
529 Ga0496112_0000773
530 Ga0496112_0005283
531 Ga0496113_0015681
532 Ga0496114_0041979
533 Ga0496114_0065723
534 Ga0496115_0048028
535 Ga0501031_0012964
536 Ga0501033_0069418
537 Ga0501034_0000024
538 Ga0501034_0010642
539 Ga0501034_0023671
540 Ga0501034_0046512
541 Ga0501036_0017897
542 Ga0501036_0041225
543 Ga0501036_0063194
544 Ga0501036_0080925
545 Ga0501037_0025401
546 Ga0501038_0040467
547 Ga0501039_0003512
548 Ga0501040_0003982
549 Ga0501040_0015794
550 Ga0501040_0040741
551 Ga0501041_0002788
552 Ga0501041_0016705
553 Ga0501041_0046106
554 Ga0501042_0003890
555 Ga0501042_0005981
556 Ga0501042_0016066
557 Ga0501043_0037157
558 Ga0501046_0014140
559 Ga0501046_0015896
560 Ga0501046_0060855
561 Ga0501047_0029003
562 Ga0501048_0018542
563 Ga0501067_0008608
564 Ga0501068_0001706
565 Ga0501068_0020215
566 Ga0501068_0041097
567 Ga0501069_0007576
568 Ga0501071_0001264
569 Ga0501071_0034704
570 Ga0501072_0002050
571 Ga0501072_0025399
572 Ga0501072_0040728
573 Ga0501072_0054758
574 Ga0501072_0099968
575 Ga0501073_0047717
576 Ga0501075_0003706
577 Ga0501075_0016475
578 Ga0501076_0002265
579 Ga0501076_0003640
580 Ga0501076_0017682
581 Ga0501076_0030686
582 Ga0501076_0035515
583 Ga0501077_0001836
584 Ga0501077_0020476
585 Ga0501079_0007967
586 Ga0501079_0060378
587 Ga0501080_0000520
588 Ga0501080_0015001
589 Ga0501080_0020102
590 Ga0501080_0053541
591 Ga0501081_0001397
592 Ga0501081_0014657
593 Ga0501081_0045731
594 Ga0501081_0050328
595 Ga0501081_0083395
596 Ga0501045_0006628
597 Ga0501045_0013883
598 Ga0501045_0025645
599 Ga0501045_0044142
600 nmdc:mga00v17_1244_c1
601 nmdc:mga05p37_12682_c1
602 nmdc:mga05p37_725_c1
603 nmdc:mga09592_117000_c1
604 nmdc:mga09592_2123_c1
605 nmdc:mga09592_925_c1
606 nmdc:mga06r32_7179_c1
607 nmdc:mga0n895_11911_c1
608 nmdc:mga0n895_3326_c1
609 nmdc:mga0rr50_11219_c1
610 nmdc:mga0a205_5075_c1
611 Ga0495601_0005870
612 Ga0500556_0000001
613 Ga0500570_000458
614 Ga0501084_0007168
615 Ga0501084_0007186
616 Ga0501084_0036926
617 Ga0501082_0005815
618 Ga0501082_0011116
619 Ga0501082_0014621
620 Ga0501082_0077437
621 Ga0530510_0003356
622 Ga0530510_0004394
623 Ga0530510_0006831
624 Ga0530510_0007764

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00122

E1-E2_ATPase

E1-E2 ATPase

168

347

0.98

PF00702

Hydrolase

haloacid dehalogenase-like hydrolase

363

581

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
2voy-assembly1.cif.gz_I cryoem model of copa, the copper transporting atpase from archaeoglobus fulgidus 0.9677 502 614
3sky-assembly1.cif.gz_A 2.1a crystal structure of the phosphate bound atp binding domain of archaeoglobus fulgidus copb 0.9257 357 618
3sky-assembly1.cif.gz_A 2.1a crystal structure of the phosphate bound atp binding domain of archaeoglobus fulgidus copb 0.9054 357 618
2voy-assembly1.cif.gz_F cryoem model of copa, the copper transporting atpase from archaeoglobus fulgidus 0.9039 164 273
2voy-assembly1.cif.gz_J cryoem model of copa, the copper transporting atpase from archaeoglobus fulgidus 0.9023 378 499
ID Description Score Start End Superfamily
af_P9WPS3_469_590_3.40.1110.10 Alpha Beta;3-Layer(aba) Sandwich;Calcium-transporting ATPase, cytoplasmic domain N;Calcium-transporting ATPase, cytoplasmic domain N 0.9712 380 499 3.40.1110.10
af_Q557B5_1074_1224_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9646 498 627 3.40.50.1000
af_P9WPU1_234_346_2.70.150.10 Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A 0.9579 164 273 2.70.150.10
af_Q4DIX9_393_509_2.70.150.10 Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A 0.9522 163 270 2.70.150.10
af_P9WPS3_469_590_3.40.1110.10 Alpha Beta;3-Layer(aba) Sandwich;Calcium-transporting ATPase, cytoplasmic domain N;Calcium-transporting ATPase, cytoplasmic domain N 0.948 380 499 3.40.1110.10
ID Description Score Start End GO Terms
AF-V5IE67-F1-model_v4 Putative atpase cu++ transporting alpha polypeptide 0.9724 498 631 GO:0005507
GO:0005524
GO:0005802
GO:0005886
GO:0006878
GO:0015677
GO:0016887
GO:0043682
GO:0060003
AF-V5IE67-F1-model_v4 Putative atpase cu++ transporting alpha polypeptide 0.9584 498 631 GO:0005507
GO:0005524
GO:0005802
GO:0005886
GO:0006878
GO:0015677
GO:0016887
GO:0043682
GO:0060003
AF-A0A7K3YY82-F1-model_v4 HAD-IC family P-type ATPase 0.9555 504 679 GO:0005507
GO:0005524
GO:0016020
GO:0016887
GO:0043682
GO:0055070
AF-A0A847MC44-F1-model_v4 Heavy metal translocating P-type ATPase 0.9388 338 680 GO:0005507
GO:0005524
GO:0005886
GO:0016887
GO:0043682
GO:0055070
AF-A0A1I1BMB4-F1-model_v4 deleted 0.9338 31 685

Map