F401709

General Info

Members Datasets Scaffolds Average Seq Length
312 206 624 229

Family's Representative Sequence

Representative Sequence 3300013308|Ga0157375_10660117|Ga0157375_106601172
Length 250
Sequence VTEVLVVDDEPSLVRALQINLKARHYQVRTAVTGSEALSVAASHPPDLVILDLGLPDLDGMQVIHGLRGWTTVPILVLSGRVDSADKVQALDAGADDYLTKPFGIDELLARIRALLRRADQTIDEPVVELDAATIDLAARRVTVGDQGVRQEVRLTPTEWHLIEVLVRHPGKLISQAQLLREVWGPGYENAQGNLRFYMGQLRRKLEADPARPRHLITEPGMGYRFQPSAPGTTTGMPWHERSRADRGVA

Samples

Sample ID Description Type Environment
1 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
95 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
96 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
97 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
98 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
99 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
100 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
101 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
102 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
103 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
104 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
105 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
106 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
107 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
108 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
109 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
110 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
111 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
112 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
113 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
114 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
115 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
116 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
117 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
118 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
120 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
121 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
122 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
125 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
126 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
127 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
128 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
129 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
130 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
131 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
132 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
133 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
134 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
135 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
136 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
137 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
138 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
139 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
140 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
141 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
142 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
143 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
144 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
145 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
146 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
147 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
148 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
149 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
150 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
151 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
152 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
153 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
154 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
155 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
156 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
157 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
158 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
159 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
160 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
161 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
162 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
163 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
164 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
165 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
166 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
167 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
168 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
169 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
170 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
171 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
172 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
173 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
180 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
181 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
182 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
183 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
184 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
185 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
187 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
188 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
189 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
190 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
191 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
192 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
193 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
194 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
195 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
196 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
197 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
198 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
199 2517572101 Frankia sp. DC12 Isolate Nodule
200 2643221561 Nocardioides sp. Root151 Isolate Unclassified
201 2643221696 Nocardioides sp. Root140 Isolate Unclassified
202 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
203 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
204 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
205 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
206 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.12
Metatranscriptomes 0.32
Isolates 2.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.64
Nodule 0.32
Rhizoplane 8.97
Rhizosphere 83.97
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157375_10660117 3300013308 Bacteria 1201
2 JGI24740J21852_10037466 3300001979 Bacteria 1497
3 JGI24737J22298_10007581 3300001990 Bacteria 3656
4 rootH1_10119188 3300003316 Bacteria 2277
5 Ga0070658_10000092 3300005327 Bacteria 81151
6 Ga0070683_100926068 3300005329 Bacteria 836
7 Ga0070670_100880843 3300005331 Bacteria 811
8 Ga0070680_100260311 3300005336 Bacteria 1467
9 Ga0070682_100351308 3300005337 Bacteria 1099
10 Ga0068868_100456852 3300005338 Bacteria 1112
11 Ga0070660_100039137 3300005339 Bacteria 3603
12 Ga0070660_100236637 3300005339 Bacteria 1487
13 Ga0070668_100065663 3300005347 Bacteria 2815
14 Ga0070668_100807075 3300005347 Bacteria 834
15 Ga0070674_100038453 3300005356 Bacteria 3225
16 Ga0070659_100236427 3300005366 Bacteria 1511
17 Ga0070667_100044391 3300005367 Bacteria 3733
18 Ga0070667_100621864 3300005367 Bacteria 996
19 Ga0070703_10000003 3300005406 Bacteria 157383
20 Ga0070708_100000796 3300005445 Bacteria 23810
21 Ga0070708_100001341 3300005445 Bacteria 18818
22 Ga0070662_100524508 3300005457 Bacteria 990
23 Ga0070662_100789351 3300005457 Bacteria 807
24 Ga0070706_100001246 3300005467 Bacteria 27254
25 Ga0070706_100009438 3300005467 Bacteria 9080
26 Ga0070706_100029843 3300005467 Bacteria 5023
27 Ga0070707_100005671 3300005468 Bacteria 11660
28 Ga0070707_100009504 3300005468 Bacteria 9034
29 Ga0070698_100002486 3300005471 Bacteria 20303
30 Ga0070698_100459882 3300005471 Bacteria 1208
31 Ga0070679_100034750 3300005530 Bacteria 4998
32 Ga0070684_100257396 3300005535 Bacteria 1596
33 Ga0070697_100033006 3300005536 Bacteria 4168
34 Ga0070697_100874748 3300005536 Bacteria 797
35 Ga0070672_100350652 3300005543 Bacteria 1258
36 Ga0070696_100040381 3300005546 Bacteria 3221
37 Ga0070665_100192844 3300005548 Bacteria 2038
38 Ga0070665_100256658 3300005548 Bacteria 1749
39 Ga0070704_100411143 3300005549 Bacteria 1157
40 Ga0068854_100711209 3300005578 Bacteria 868
41 Ga0068859_100589417 3300005617 Bacteria 1205
42 Ga0068866_10011969 3300005718 Bacteria 3772
43 Ga0068861_100075878 3300005719 Bacteria 2618
44 Ga0068863_100064696 3300005841 Bacteria 3459
45 Ga0068863_100096217 3300005841 Bacteria 2811
46 Ga0068863_100578979 3300005841 Bacteria 1110
47 Ga0068858_100000711 3300005842 Bacteria 34748
48 Ga0068858_100012495 3300005842 Bacteria 8009
49 Ga0068858_100909277 3300005842 Bacteria 861
50 Ga0068860_100005265 3300005843 Bacteria 13131
51 Ga0068862_100047146 3300005844 Bacteria 3677
52 Ga0081455_10298524 3300005937 Bacteria 1157
53 Ga0081539_10101464 3300005985 Bacteria 1466
54 Ga0070717_10213081 3300006028 Bacteria 1696
55 Ga0075428_100008327 3300006844 Bacteria 11493
56 Ga0075428_100016117 3300006844 Bacteria 8261
57 Ga0075428_100034602 3300006844 Bacteria 5571
58 Ga0075430_100051604 3300006846 Bacteria 3466
59 Ga0075430_100269177 3300006846 Bacteria 1410
60 Ga0075431_100062723 3300006847 Bacteria 3835
61 Ga0075431_100088979 3300006847 Bacteria 3187
62 Ga0075431_100805071 3300006847 Bacteria 913
63 Ga0075433_10002392 3300006852 Bacteria 14271
64 Ga0075429_100046701 3300006880 Bacteria 3768
65 Ga0075429_100397783 3300006880 Bacteria 1206
66 Ga0075436_100092713 3300006914 Bacteria 2100
67 Ga0097620_100589441 3300006931 Bacteria 1205
68 Ga0075435_100006476 3300007076 Bacteria 8283
69 Ga0099794_10105806 3300007265 Bacteria 1407
70 Ga0105245_10095840 3300009098 Bacteria 2737
71 Ga0105245_10259446 3300009098 Bacteria 1691
72 Ga0105247_10010007 3300009101 Bacteria 5743
73 Ga0114129_10040398 3300009147 Bacteria 6576
74 Ga0114129_10173523 3300009147 Bacteria 2938
75 Ga0114129_10414997 3300009147 Bacteria 1772
76 Ga0114129_10451936 3300009147 Bacteria 1685
77 Ga0105243_10015261 3300009148 Bacteria 5813
78 Ga0105242_10013567 3300009176 Bacteria 6303
79 Ga0105242_10145580 3300009176 Bacteria 2061
80 Ga0105237_10077059 3300009545 Bacteria 3324
81 Ga0105249_10282644 3300009553 Bacteria 1658
82 Ga0105239_10042311 3300010375 Bacteria 4993
83 Ga0105239_10116913 3300010375 Bacteria 2960
84 Ga0157369_10003331 3300013105 Bacteria 19087
85 Ga0157369_10433714 3300013105 Bacteria 1361
86 Ga0157378_10002053 3300013297 Bacteria 18028
87 Ga0163162_10051725 3300013306 Bacteria 4122
88 Ga0163162_10699768 3300013306 Bacteria 1135
89 Ga0163162_11018208 3300013306 Bacteria 937
90 Ga0157372_10432800 3300013307 Bacteria 1533
91 Ga0157375_10047303 3300013308 Bacteria 4200
92 Ga0157375_10672891 3300013308 Bacteria 1190
93 Ga0163163_10117088 3300014325 Bacteria 2696
94 Ga0163163_10265760 3300014325 Bacteria 1767
95 Ga0157380_10166944 3300014326 Bacteria 1919
96 Ga0157379_10000496 3300014968 Bacteria 32033
97 Ga0163161_10409514 3300017792 Bacteria 1089
98 Ga0224712_10087003 3300022467 Bacteria 1301
99 Ga0207653_10000001 3300025885 Bacteria 287007
100 Ga0207642_10012115 3300025899 Bacteria 3102
101 Ga0207710_10038673 3300025900 Bacteria 2110
102 Ga0207647_10028625 3300025904 Bacteria 3616
103 Ga0207647_10057961 3300025904 Bacteria 2373
104 Ga0207705_10000508 3300025909 Bacteria 33080
105 Ga0207684_10000025 3300025910 Bacteria 316760
106 Ga0207684_10003080 3300025910 Bacteria 16510
107 Ga0207684_10193972 3300025910 Bacteria 1752
108 Ga0207707_10335158 3300025912 Bacteria 1305
109 Ga0207660_10025995 3300025917 Bacteria 3981
110 Ga0207660_10153221 3300025917 Bacteria 1773
111 Ga0207657_10088024 3300025919 Bacteria 2597
112 Ga0207652_10019799 3300025921 Bacteria 5540
113 Ga0207652_10203266 3300025921 Bacteria 1783
114 Ga0207652_10421078 3300025921 Bacteria 1204
115 Ga0207646_10004801 3300025922 Bacteria 14506
116 Ga0207646_10012440 3300025922 Bacteria 8181
117 Ga0207646_10101903 3300025922 Bacteria 2574
118 Ga0207687_10490205 3300025927 Bacteria 1024
119 Ga0207690_10345500 3300025932 Bacteria 1175
120 Ga0207706_10126236 3300025933 Bacteria 2250
121 Ga0207706_10626361 3300025933 Bacteria 923
122 Ga0207686_10021909 3300025934 Bacteria 3674
123 Ga0207709_10030166 3300025935 Bacteria 3152
124 Ga0207709_10314159 3300025935 Bacteria 1170
125 Ga0207670_10787220 3300025936 Bacteria 792
126 Ga0207669_10019560 3300025937 Bacteria 3529
127 Ga0207661_10684734 3300025944 Bacteria 943
128 Ga0207712_10189717 3300025961 Bacteria 1621
129 Ga0207677_10121024 3300026023 Bacteria 1969
130 Ga0207703_10000003 3300026035 Bacteria 532213
131 Ga0207703_10149936 3300026035 Bacteria 2032
132 Ga0207703_10873175 3300026035 Bacteria 861
133 Ga0207641_10165753 3300026088 Bacteria 2012
134 Ga0207641_10557585 3300026088 Bacteria 1118
135 Ga0207674_10376231 3300026116 Bacteria 1373
136 Ga0207675_100010647 3300026118 Bacteria 8617
137 Ga0268266_10253395 3300028379 Bacteria 1629
138 Ga0268265_10043276 3300028380 Bacteria 3347
139 Ga0268264_10016292 3300028381 Bacteria 6087
140 Ga0268264_10283196 3300028381 Bacteria 1554
141 Ga0265319_1078055 3300028563 Bacteria 1054
142 Ga0265334_10000234 3300028573 Bacteria 31941
143 Ga0265334_10021467 3300028573 Bacteria 2636
144 Ga0265334_10073717 3300028573 Bacteria 1267
145 Ga0265338_10000646 3300028800 Bacteria 60312
146 Ga0265338_10002091 3300028800 Bacteria 30830
147 Ga0265338_10135570 3300028800 Bacteria 1936
148 Ga0265338_10280791 3300028800 Bacteria 1217
149 Ga0307511_10241183 3300030521 Bacteria 881
150 Ga0316181_1048158 3300030744 Bacteria 929
151 Ga0265331_10021018 3300031250 Bacteria 3343
152 Ga0307509_10046433 3300031507 Bacteria 4676
153 Ga0265313_10000878 3300031595 Bacteria 30394
154 Ga0265314_10062949 3300031711 Bacteria 2519
155 Ga0307415_100558377 3300032126 Bacteria 1012
156 Ga0373930_0001399 3300034816 Bacteria 3579
157 Ga0373928_0001202 3300035084 Bacteria 5116
158 Ga0373929_0010115 3300035085 Bacteria 1758
159 Ga0373949_0024440 3300035090 Bacteria 1405
160 Ga0373951_0025325 3300035091 Bacteria 1378
161 Ga0373932_0000096 3300035112 Bacteria 23497
162 Ga0373956_0056300 3300035119 Bacteria 1775
163 Ga0373956_0115588 3300035119 Bacteria 1251
164 Ga0373955_0170830 3300035172 Bacteria 1287
165 Ga0373962_0001000 3300035242 Bacteria 6543
166 Ga0373924_0113009 3300035410 Bacteria 1175
167 Ga0373931_0000010 3300035691 Bacteria 334069
168 Ga0373935_0010179 3300035692 Bacteria 5633
169 Ga0373933_0274514 3300035724 Bacteria 1088
170 Ga0373947_0086371 3300035725 Bacteria 1950
171 Ga0373937_0674665 3300036401 Bacteria 979
172 Ga0373925_0194213 3300037068 Bacteria 1612
173 Ga0395899_0105454 3300037312 Bacteria 2030
174 Ga0395900_0024201 3300037418 Bacteria 6217
175 Ga0395900_0346092 3300037418 Bacteria 1461
176 Ga0395898_0062992 3300037466 Bacteria 3600
177 Ga0395898_0118355 3300037466 Bacteria 2538
178 Ga0395901_0301743 3300038443 Bacteria 1660
179 Ga0439466_0031151 3300041411 Bacteria 1826
180 Ga0439449_0005525 3300042007 Bacteria 4839
181 Ga0439449_0128257 3300042007 Bacteria 942
182 Ga0439452_017347 3300042010 Bacteria 1937
183 Ga0450906_023273 3300042145 Bacteria 1104
184 Ga0466972_0075023 3300044658 Bacteria 1612
185 Ga0466965_0034342 3300044683 Bacteria 2481
186 Ga0466966_0013773 3300044684 Bacteria 5351
187 Ga0466966_0478802 3300044684 Bacteria 748
188 Ga0466961_0126887 3300044693 Bacteria 1600
189 Ga0466963_0033729 3300044694 Bacteria 3326
190 Ga0466963_0063361 3300044694 Bacteria 2474
191 Ga0466963_0109392 3300044694 Bacteria 1896
192 Ga0466963_0234618 3300044694 Bacteria 1286
193 Ga0466963_0300885 3300044694 Bacteria 1128
194 Ga0466964_0012013 3300044706 Bacteria 3275
195 Ga0466964_0050326 3300044706 Bacteria 1708
196 Ga0466971_0027112 3300044719 Bacteria 2565
197 Ga0466971_0027537 3300044719 Bacteria 2546
198 Ga0466970_0028945 3300044765 Bacteria 2914
199 Ga0466970_0182621 3300044765 Bacteria 1164
200 Ga0466970_0419893 3300044765 Bacteria 765
201 Ga0466957_0008617 3300044842 Bacteria 5804
202 Ga0466957_0029650 3300044842 Bacteria 3264
203 Ga0466957_0051280 3300044842 Bacteria 2512
204 Ga0466957_0051841 3300044842 Bacteria 2498
205 Ga0466960_0003120 3300044901 Bacteria 6348
206 Ga0466960_0009707 3300044901 Bacteria 3978
207 Ga0466960_0156012 3300044901 Bacteria 1222
208 Ga0466960_0264724 3300044901 Bacteria 959
209 Ga0466958_0348798 3300045836 Bacteria 953
210 Ga0466967_0075976 3300045976 Bacteria 3020
211 Ga0495603_0006197 3300046455 Bacteria 7153
212 Ga0495603_0006507 3300046455 Bacteria 7002
213 Ga0495629_0224067 3300046459 Bacteria 1297
214 Ga0495629_0345893 3300046459 Bacteria 1015
215 Ga0495585_0069518 3300046492 Bacteria 1922
216 Ga0495607_0147595 3300046501 Bacteria 1207
217 Ga0495630_0192863 3300046517 Bacteria 1554
218 Ga0495630_0218877 3300046517 Bacteria 1454
219 Ga0495666_0019757 3300046526 Bacteria 3340
220 Ga0495666_0189807 3300046526 Bacteria 947
221 Ga0495642_0106645 3300046528 Bacteria 1196
222 Ga0495656_0213257 3300046615 Bacteria 963
223 Ga0495634_0308225 3300046642 Bacteria 956
224 Ga0495588_0237056 3300046674 Bacteria 962
225 Ga0495581_0238226 3300047315 Bacteria 1064
226 Ga0495593_0124426 3300047673 Bacteria 1311
227 Ga0496100_0046633 3300048903 Bacteria 2788
228 Ga0496101_0305066 3300048904 Bacteria 1247
229 Ga0496102_0147836 3300048905 Bacteria 2206
230 Ga0496102_0154244 3300048905 Bacteria 2159
231 Ga0496105_0142820 3300048908 Bacteria 1970
232 Ga0496105_0175428 3300048908 Bacteria 1756
233 Ga0496105_0300825 3300048908 Bacteria 1290
234 Ga0496106_0035764 3300048909 Bacteria 3714
235 Ga0496106_0092013 3300048909 Bacteria 2342
236 Ga0496107_0057978 3300048910 Bacteria 2799
237 Ga0496108_0081314 3300048911 Bacteria 2745
238 Ga0496108_0139383 3300048911 Bacteria 2089
239 Ga0496109_0100266 3300048912 Bacteria 2686
240 Ga0496109_0128472 3300048912 Bacteria 2364
241 Ga0496109_0206350 3300048912 Bacteria 1848
242 Ga0496110_0046517 3300048913 Bacteria 3797
243 Ga0496110_0056652 3300048913 Bacteria 3449
244 Ga0496110_0123340 3300048913 Bacteria 2336
245 Ga0496110_0842354 3300048913 Bacteria 822
246 Ga0496111_0012327 3300048914 Bacteria 5783
247 Ga0496111_0294667 3300048914 Bacteria 1203
248 Ga0496112_0045617 3300048915 Bacteria 4297
249 Ga0496112_0106910 3300048915 Bacteria 2768
250 Ga0496114_0010284 3300048917 Bacteria 7446
251 Ga0496114_0018674 3300048917 Bacteria 5610
252 Ga0496114_0260745 3300048917 Bacteria 1526
253 Ga0496115_0204444 3300048918 Bacteria 1631
254 Ga0496115_0240299 3300048918 Bacteria 1493
255 Ga0496117_0003132 3300048920 Bacteria 19732
256 Ga0496118_0000640 3300048921 Bacteria 57413
257 Ga0496119_0016731 3300048922 Bacteria 5560
258 Ga0496119_0025424 3300048922 Bacteria 4136
259 Ga0496119_0135886 3300048922 Bacteria 1334
260 Ga0496120_0059473 3300048923 Bacteria 2142
261 Ga0496121_0007235 3300048924 Bacteria 13436
262 Ga0496122_0013449 3300048925 Bacteria 8009
263 Ga0496122_0180671 3300048925 Bacteria 1259
264 Ga0496123_0019381 3300048926 Bacteria 5364
265 Ga0496123_0142159 3300048926 Bacteria 1310
266 Ga0496124_0000070 3300048927 Bacteria 220875
267 Ga0501031_0077109 3300049568 Bacteria 2171
268 Ga0501031_0251408 3300049568 Bacteria 1149
269 Ga0501033_0280539 3300049570 Bacteria 1176
270 Ga0501034_0019834 3300049571 Bacteria 6870
271 Ga0501038_0108177 3300049574 Bacteria 2306
272 Ga0501040_0335810 3300049576 Bacteria 1082
273 Ga0501047_0078289 3300049581 Bacteria 3179
274 Ga0501070_0019459 3300049586 Bacteria 5694
275 Ga0501070_0021076 3300049586 Bacteria 5469
276 Ga0501070_0075044 3300049586 Bacteria 2799
277 Ga0501071_0219063 3300049587 Bacteria 1432
278 Ga0501072_0088563 3300049588 Bacteria 2456
279 Ga0501080_0014088 3300049742 Bacteria 7360
280 Ga0501081_0482578 3300049743 Bacteria 923
281 Ga0501083_0100615 3300049744 Bacteria 1906
282 Ga0501035_0457129 3300049822 Bacteria 1056
283 Ga0501044_0186594 3300049823 Bacteria 2038
284 nmdc:mga05p37_234142_c1 3300050507 Bacteria 2211
285 nmdc:mga05p37_246604_c1 3300050507 Bacteria 2144
286 nmdc:mga05p37_369591_c1 3300050507 Bacteria 1683
287 nmdc:mga05p37_385677_c1 3300050507 Bacteria 1640
288 nmdc:mga05p37_38931_c1 3300050507 Bacteria 5833
289 nmdc:mga09592_103957_c1 3300050508 Bacteria 2434
290 nmdc:mga09592_382700_c1 3300050508 Bacteria 1217
291 nmdc:mga06r32_120220_c1 3300050510 Bacteria 2591
292 nmdc:mga06r32_32572_c1 3300050510 Bacteria 4905
293 nmdc:mga0n895_109893_c1 3300050512 Bacteria 2772
294 nmdc:mga0n895_242513_c1 3300050512 Bacteria 1829
295 nmdc:mga0n895_804_c1 3300050512 Bacteria 22427
296 nmdc:mga0rr50_3296_c1 3300050513 Bacteria 9268
297 nmdc:mga0a205_1151_c1 3300050515 Bacteria 21987
298 nmdc:mga0a205_366374_c1 3300050515 Bacteria 1307
299 Ga0495595_0050916 3300053084 Bacteria 1919
300 Ga0495619_0348498 3300053085 Bacteria 1024
301 Ga0500568_0002041 3300053139 Bacteria 12268
302 Ga0500616_0048486 3300053153 Bacteria 2252
303 Ga0501082_0479077 3300060353 Bacteria 1088
304 Ga0466962_0045421 3300061719 Bacteria 2100
305 2517763197 2517572101 Bacteria 6884336
306 2643826379 2643221561 Bacteria 4984412
307 2644532736 2643221696 Bacteria 5431823
308 2816421944 2816332119 Bacteria 8120218
309 2862184468 2862178590 Bacteria 8583590
310 2974295316 2974294766 Bacteria 3767688
311 2974324881 2974324384 Bacteria 3750535
312 8056059002 8056054917 Bacteria 5736694
313 Ga0157375_10660117
314 JGI24740J21852_10037466
315 JGI24737J22298_10007581
316 rootH1_10119188
317 Ga0070658_10000092
318 Ga0070683_100926068
319 Ga0070670_100880843
320 Ga0070680_100260311
321 Ga0070682_100351308
322 Ga0068868_100456852
323 Ga0070660_100039137
324 Ga0070660_100236637
325 Ga0070668_100065663
326 Ga0070668_100807075
327 Ga0070674_100038453
328 Ga0070659_100236427
329 Ga0070667_100044391
330 Ga0070667_100621864
331 Ga0070703_10000003
332 Ga0070708_100000796
333 Ga0070708_100001341
334 Ga0070662_100524508
335 Ga0070662_100789351
336 Ga0070706_100001246
337 Ga0070706_100009438
338 Ga0070706_100029843
339 Ga0070707_100005671
340 Ga0070707_100009504
341 Ga0070698_100002486
342 Ga0070698_100459882
343 Ga0070679_100034750
344 Ga0070684_100257396
345 Ga0070697_100033006
346 Ga0070697_100874748
347 Ga0070672_100350652
348 Ga0070696_100040381
349 Ga0070665_100192844
350 Ga0070665_100256658
351 Ga0070704_100411143
352 Ga0068854_100711209
353 Ga0068859_100589417
354 Ga0068866_10011969
355 Ga0068861_100075878
356 Ga0068863_100064696
357 Ga0068863_100096217
358 Ga0068863_100578979
359 Ga0068858_100000711
360 Ga0068858_100012495
361 Ga0068858_100909277
362 Ga0068860_100005265
363 Ga0068862_100047146
364 Ga0081455_10298524
365 Ga0081539_10101464
366 Ga0070717_10213081
367 Ga0075428_100008327
368 Ga0075428_100016117
369 Ga0075428_100034602
370 Ga0075430_100051604
371 Ga0075430_100269177
372 Ga0075431_100062723
373 Ga0075431_100088979
374 Ga0075431_100805071
375 Ga0075433_10002392
376 Ga0075429_100046701
377 Ga0075429_100397783
378 Ga0075436_100092713
379 Ga0097620_100589441
380 Ga0075435_100006476
381 Ga0099794_10105806
382 Ga0105245_10095840
383 Ga0105245_10259446
384 Ga0105247_10010007
385 Ga0114129_10040398
386 Ga0114129_10173523
387 Ga0114129_10414997
388 Ga0114129_10451936
389 Ga0105243_10015261
390 Ga0105242_10013567
391 Ga0105242_10145580
392 Ga0105237_10077059
393 Ga0105249_10282644
394 Ga0105239_10042311
395 Ga0105239_10116913
396 Ga0157369_10003331
397 Ga0157369_10433714
398 Ga0157378_10002053
399 Ga0163162_10051725
400 Ga0163162_10699768
401 Ga0163162_11018208
402 Ga0157372_10432800
403 Ga0157375_10047303
404 Ga0157375_10672891
405 Ga0163163_10117088
406 Ga0163163_10265760
407 Ga0157380_10166944
408 Ga0157379_10000496
409 Ga0163161_10409514
410 Ga0224712_10087003
411 Ga0207653_10000001
412 Ga0207642_10012115
413 Ga0207710_10038673
414 Ga0207647_10028625
415 Ga0207647_10057961
416 Ga0207705_10000508
417 Ga0207684_10000025
418 Ga0207684_10003080
419 Ga0207684_10193972
420 Ga0207707_10335158
421 Ga0207660_10025995
422 Ga0207660_10153221
423 Ga0207657_10088024
424 Ga0207652_10019799
425 Ga0207652_10203266
426 Ga0207652_10421078
427 Ga0207646_10004801
428 Ga0207646_10012440
429 Ga0207646_10101903
430 Ga0207687_10490205
431 Ga0207690_10345500
432 Ga0207706_10126236
433 Ga0207706_10626361
434 Ga0207686_10021909
435 Ga0207709_10030166
436 Ga0207709_10314159
437 Ga0207670_10787220
438 Ga0207669_10019560
439 Ga0207661_10684734
440 Ga0207712_10189717
441 Ga0207677_10121024
442 Ga0207703_10000003
443 Ga0207703_10149936
444 Ga0207703_10873175
445 Ga0207641_10165753
446 Ga0207641_10557585
447 Ga0207674_10376231
448 Ga0207675_100010647
449 Ga0268266_10253395
450 Ga0268265_10043276
451 Ga0268264_10016292
452 Ga0268264_10283196
453 Ga0265319_1078055
454 Ga0265334_10000234
455 Ga0265334_10021467
456 Ga0265334_10073717
457 Ga0265338_10000646
458 Ga0265338_10002091
459 Ga0265338_10135570
460 Ga0265338_10280791
461 Ga0307511_10241183
462 Ga0316181_1048158
463 Ga0265331_10021018
464 Ga0307509_10046433
465 Ga0265313_10000878
466 Ga0265314_10062949
467 Ga0307415_100558377
468 Ga0373930_0001399
469 Ga0373928_0001202
470 Ga0373929_0010115
471 Ga0373949_0024440
472 Ga0373951_0025325
473 Ga0373932_0000096
474 Ga0373956_0056300
475 Ga0373956_0115588
476 Ga0373955_0170830
477 Ga0373962_0001000
478 Ga0373924_0113009
479 Ga0373931_0000010
480 Ga0373935_0010179
481 Ga0373933_0274514
482 Ga0373947_0086371
483 Ga0373937_0674665
484 Ga0373925_0194213
485 Ga0395899_0105454
486 Ga0395900_0024201
487 Ga0395900_0346092
488 Ga0395898_0062992
489 Ga0395898_0118355
490 Ga0395901_0301743
491 Ga0439466_0031151
492 Ga0439449_0005525
493 Ga0439449_0128257
494 Ga0439452_017347
495 Ga0450906_023273
496 Ga0466972_0075023
497 Ga0466965_0034342
498 Ga0466966_0013773
499 Ga0466966_0478802
500 Ga0466961_0126887
501 Ga0466963_0033729
502 Ga0466963_0063361
503 Ga0466963_0109392
504 Ga0466963_0234618
505 Ga0466963_0300885
506 Ga0466964_0012013
507 Ga0466964_0050326
508 Ga0466971_0027112
509 Ga0466971_0027537
510 Ga0466970_0028945
511 Ga0466970_0182621
512 Ga0466970_0419893
513 Ga0466957_0008617
514 Ga0466957_0029650
515 Ga0466957_0051280
516 Ga0466957_0051841
517 Ga0466960_0003120
518 Ga0466960_0009707
519 Ga0466960_0156012
520 Ga0466960_0264724
521 Ga0466958_0348798
522 Ga0466967_0075976
523 Ga0495603_0006197
524 Ga0495603_0006507
525 Ga0495629_0224067
526 Ga0495629_0345893
527 Ga0495585_0069518
528 Ga0495607_0147595
529 Ga0495630_0192863
530 Ga0495630_0218877
531 Ga0495666_0019757
532 Ga0495666_0189807
533 Ga0495642_0106645
534 Ga0495656_0213257
535 Ga0495634_0308225
536 Ga0495588_0237056
537 Ga0495581_0238226
538 Ga0495593_0124426
539 Ga0496100_0046633
540 Ga0496101_0305066
541 Ga0496102_0147836
542 Ga0496102_0154244
543 Ga0496105_0142820
544 Ga0496105_0175428
545 Ga0496105_0300825
546 Ga0496106_0035764
547 Ga0496106_0092013
548 Ga0496107_0057978
549 Ga0496108_0081314
550 Ga0496108_0139383
551 Ga0496109_0100266
552 Ga0496109_0128472
553 Ga0496109_0206350
554 Ga0496110_0046517
555 Ga0496110_0056652
556 Ga0496110_0123340
557 Ga0496110_0842354
558 Ga0496111_0012327
559 Ga0496111_0294667
560 Ga0496112_0045617
561 Ga0496112_0106910
562 Ga0496114_0010284
563 Ga0496114_0018674
564 Ga0496114_0260745
565 Ga0496115_0204444
566 Ga0496115_0240299
567 Ga0496117_0003132
568 Ga0496118_0000640
569 Ga0496119_0016731
570 Ga0496119_0025424
571 Ga0496119_0135886
572 Ga0496120_0059473
573 Ga0496121_0007235
574 Ga0496122_0013449
575 Ga0496122_0180671
576 Ga0496123_0019381
577 Ga0496123_0142159
578 Ga0496124_0000070
579 Ga0501031_0077109
580 Ga0501031_0251408
581 Ga0501033_0280539
582 Ga0501034_0019834
583 Ga0501038_0108177
584 Ga0501040_0335810
585 Ga0501047_0078289
586 Ga0501070_0019459
587 Ga0501070_0021076
588 Ga0501070_0075044
589 Ga0501071_0219063
590 Ga0501072_0088563
591 Ga0501080_0014088
592 Ga0501081_0482578
593 Ga0501083_0100615
594 Ga0501035_0457129
595 Ga0501044_0186594
596 nmdc:mga05p37_234142_c1
597 nmdc:mga05p37_246604_c1
598 nmdc:mga05p37_369591_c1
599 nmdc:mga05p37_385677_c1
600 nmdc:mga05p37_38931_c1
601 nmdc:mga09592_103957_c1
602 nmdc:mga09592_382700_c1
603 nmdc:mga06r32_120220_c1
604 nmdc:mga06r32_32572_c1
605 nmdc:mga0n895_109893_c1
606 nmdc:mga0n895_242513_c1
607 nmdc:mga0n895_804_c1
608 nmdc:mga0rr50_3296_c1
609 nmdc:mga0a205_1151_c1
610 nmdc:mga0a205_366374_c1
611 Ga0495595_0050916
612 Ga0495619_0348498
613 Ga0500568_0002041
614 Ga0500616_0048486
615 Ga0501082_0479077
616 Ga0466962_0045421
617 2517763197
618 2643826379
619 2644532736
620 2816421944
621 2862184468
622 2974295316
623 2974324881
624 8056059002

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

4

113

0.99

PF00486

Trans_reg_C

Transcriptional regulatory protein, C terminal

150

226

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9794 3 118
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9791 3 118
1nxx-assembly1.cif.gz_A-2 micarec ph 5.5 0.9786 3 118
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9753 1 120
7m0s-assembly1.cif.gz_B n-terminal domain of pmra from acinetobacter baumannii 0.9713 1 121
ID Description Score Start End Superfamily
af_P9WGN1_2_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 1.005 2 80 3.40.50.2300
af_P9WGN1_2_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9927 2 80 3.40.50.2300
af_O69730_8_88_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9901 1 77 3.40.50.2300
af_P21866_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9883 1 80 3.40.50.2300
af_Q2G2U6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9797 3 84 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A286E359-F1-model_v4 Response regulator receiver domain-containing protein 0.9859 1 120 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A1U7IKE4-F1-model_v4 Response regulatory domain-containing protein 0.9857 1 124 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A7J0CSU7-F1-model_v4 Response regulatory domain-containing protein 0.9789 2 122 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A7Y5QFY7-F1-model_v4 Response regulator transcription factor 0.9781 1 120 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A2D7EBU1-F1-model_v4 deleted 0.9748 2 125

Map