F401559

General Info

Members Datasets Scaffolds Average Seq Length
312 251 624 589

Family's Representative Sequence

Representative Sequence 3300005339|Ga0070660_100093855|Ga0070660_1000938552
Length 571
Sequence MPTPLRGDFAPNTRLLRITLRVLLDLIHLFTNLFFFQAVSTADRSPASHTLGAAVIALPVIGGLIVGLMARYGSDKIRGHGIPEAIEAILFGKSRMSPKVAVLKPLSSGIVIGSGGPFGAEGPIIMTGGAIGSLLAQHFHLSAAERKALLVSGATAGMTAVFGTPVAAVLLAVELLLFELRPRSLLPVAVACAVAGFLRPLLVGASGPLFPLETAPVGPLAIVSCVAAGLACGALSATLSLSLYKVEDLFGKLPVHWMWWPAIGGLVVGIGGLLEPRALGVGYDVIDDLLHNHLALSAVVALLAVKAAIWVIALGSGTSGGVLAPLLMMGAGLGVVLGHVLPGHEAALWPLVCMAATLGGTMRVPLTATVFAFGLTHDANALLPTLCASAVAYGFTVLTMRRSILTEKIARRGHHIYREYGVDPLERHAVHEVMTRSVRSIDAAMTVAQAMTGPFGPEQLHRAHPVVEGSRLVGIVDRAAVIELHDRVPHAVVAEACAMAPEFALPDETCRAVATRLARLQLERLPVVSDAVSLTVVGIVSRSDLIKLSGVHFDEEDTCERMRSVPWRDQP

Samples

Sample ID Description Type Environment
1 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
2 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
6 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
7 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
8 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
9 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
10 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
11 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
12 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
13 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
14 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
15 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
16 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
17 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
18 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
19 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
20 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
21 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
22 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
23 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
24 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
25 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
36 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
50 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
51 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
52 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
53 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
54 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
61 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
62 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
64 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
67 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
68 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
72 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
75 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
97 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
101 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
102 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
106 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
107 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
108 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
109 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
110 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
111 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
112 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
113 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
114 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
115 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
116 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
117 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
118 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
119 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
120 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
121 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
122 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
123 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
124 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
125 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
126 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
127 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
128 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
129 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
130 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
131 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
132 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
133 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
134 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
135 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
136 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
137 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
138 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
139 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
140 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
141 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
142 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
143 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
150 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
151 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
152 2508501125 Burkholderia sp. WSM2232 Isolate Nodule
153 2510065045 Paraburkholderia sprentiae WSM5005 Isolate Nodule
154 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
155 2512047030 Paraburkholderia tuberum STM678 Isolate Nodule
156 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
157 2513237151 Burkholderia sp. WSM2230 Isolate Nodule
158 2515154122 Paraburkholderia atlantica JPY251 Isolate Nodule
159 2515154123 Trinickia symbiotica JPY347 Isolate Nodule
160 2519103095 Burkholderia sp. KJ006 Isolate Nodule
161 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
162 2526164713 Paraburkholderia phenoliruptrix JPY366 Isolate Nodule
163 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
164 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
165 2562617112 Burkholderia sp. BT03 Isolate Rhizosphere
166 2582581311 Burkholderia sp. WP42 Isolate Rhizosphere
167 2596583598 Ralstonia sp. UNCCL144 Isolate Unclassified
168 2599185178 Ralstonia sp. NFACC01 Isolate Rhizoplane
169 2599185240 Burkholderia sp. NFPP32 Isolate Rhizoplane
170 2599185355 Burkholderia sp. NFACC33-1 Isolate Rhizoplane
171 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
172 2643221658 Variovorax sp. Root411 Isolate Unclassified
173 2643221683 Variovorax sp. Root473 Isolate Unclassified
174 2675903129 Burkholderia pyrrocinia NFIX32 Isolate Rhizoplane
175 2711768613 Burkholderia sp. BT03 Isolate Rhizosphere
176 2718217991 Paraburkholderia sprentiae WSM5005 Isolate Nodule
177 2721755763 Pandoraea thiooxydans ATSB16 Isolate Rhizosphere
178 2738541296 Paraburkholderia sp. GV073 Isolate Unclassified
179 2738541298 Paraburkholderia sp. GV068 Isolate Unclassified
180 2738541306 Paraburkholderia sp. GV052 Isolate Unclassified
181 2738543002 Paraburkholderia sp. GV072 Isolate Unclassified
182 2738543008 Paraburkholderia sp. GV060 Isolate Unclassified
183 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
184 2751185846 Paraburkholderia ribeironis STM 7296 Isolate Unclassified
185 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
186 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
187 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
188 2808606386 Herbaspirillum sp. SJZ099 Isolate Rhizosphere
189 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
190 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
191 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
192 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
193 2816332253 Burkholderia vietnamiensis HI2297 Isolate Unclassified
194 2816332256 Burkholderia vietnamiensis MSMB608WGS Isolate Unclassified
195 2816332286 Burkholderia vietnamiensis HI2221 Isolate Rhizosphere
196 2818991436 Collimonas arenae 515 Isolate Unclassified
197 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
198 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
199 2818991450 Burkholderia sp. 604 Isolate Unclassified
200 2818991452 Burkholderia cepacia 561 Isolate Unclassified
201 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
202 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
203 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
204 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
205 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
206 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
207 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
208 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
209 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
210 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
211 2885266251 Ralstonia sp. SET104 Isolate Nodule
212 2885270888 Paraburkholderia sp. UYCPa14C Isolate Unclassified
213 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
214 2900577576 Ralstonia sp. TCR112 Isolate Rhizosphere
215 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
216 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
217 2904483920 Paraburkholderia caledonica 575 Isolate Unclassified
218 2904564687 Burkholderia sp. 571 Isolate Unclassified
219 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
220 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
221 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
222 2919527303 Paraburkholderia strydomiana 3827 Isolate Unclassified
223 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
224 2928051484 Variovorax sp. 1133 Isolate Unclassified
225 2928058823 Ralstonia sp. 1138 Isolate Unclassified
226 2928108538 Paraburkholderia terricola 1595 Isolate Rhizosphere
227 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
228 2928135762 Paraburkholderia terricola 1988 Isolate Unclassified
229 2928163908 Burkholderia sp. 567 Isolate Unclassified
230 2928170801 Burkholderia sp. 572 Isolate Unclassified
231 2928503688 Paraburkholderia terricola 1263 Isolate Rhizosphere
232 2928536128 Burkholderia sola 565 Isolate Unclassified
233 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
234 2945934425 Paraburkholderia graminis W1I13 Isolate Rhizosphere
235 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
236 2990703756 Paraburkholderia graminis SLBN-33 Isolate Rhizosphere
237 641736151 Paraburkholderia graminis C4D1M Isolate Rhizoplane
238 641736154 Burkholderia ambifaria IOP40-10 Isolate Rhizosphere
239 642555113 Paraburkholderia phytofirmans PsJN Isolate Unclassified
240 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
241 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
242 8020807995 Burkholderia sp. B10 Isolate Rhizosphere
243 8020938398 Burkholderia sp. BE12 Isolate Rhizosphere
244 8020945358 Burkholderia sp. BE17 Isolate Rhizosphere
245 8020953355 Burkholderia sp. BE24 Isolate Rhizosphere
246 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere
247 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified
248 8040167225 Burkholderia vietnamiensis RS1 Isolate Unclassified
249 8040173305 Burkholderia vietnamiensis BE10 Isolate Rhizosphere
250 8055266321 Paraburkholderia rhynchosiae LMG 27174 Isolate Nodule
251 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 66.99
Metatranscriptomes 0.32
Isolates 32.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 26.6
Nodule 8.33
Rhizoplane 1.92
Rhizosphere 43.91
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070660_100093855 3300005339 Bacteria 2370
2 JGI24741J21665_1000215 3300001915 Bacteria 17233
3 JGI24740J21852_10001548 3300001979 Bacteria 10587
4 JGI25151J46595_10001215 3300003187 Bacteria 18399
5 JGI25165J46597_1000001 3300003214 Bacteria 1111887
6 Ga0055538_1000001 3300003751 Bacteria 1111887
7 Ga0055539_1000001 3300003752 Bacteria 1111887
8 Ga0055539_1000321 3300003752 Bacteria 24630
9 Ga0055533_1000003 3300003756 Bacteria 1111887
10 Ga0055533_1001358 3300003756 Bacteria 6568
11 Ga0055532_1000008 3300003758 Bacteria 404753
12 Ga0055525_1000003 3300003759 Bacteria 962094
13 Ga0055525_1000004 3300003759 Bacteria 888039
14 Ga0055525_1000169 3300003759 Bacteria 83336
15 Ga0055527_1001581 3300003760 Bacteria 4602
16 Ga0055535_1000006 3300003761 Bacteria 404753
17 Ga0055542_1001516 3300003762 Bacteria 11255
18 Ga0055529_1000025 3300003763 Bacteria 304757
19 Ga0055529_1000030 3300003763 Bacteria 272455
20 Ga0055526_1000250 3300003771 Bacteria 45797
21 Ga0055526_1006497 3300003771 Bacteria 6328
22 Ga0055526_1016181 3300003771 Bacteria 2938
23 Ga0055537_1000670 3300003773 Bacteria 18035
24 Ga0055524_1000131 3300003775 Bacteria 88545
25 Ga0055536_1000069 3300003781 Bacteria 94802
26 Ga0055534_1000008 3300003784 Bacteria 211098
27 Ga0055534_1001659 3300003784 Bacteria 8573
28 Ga0055534_1001808 3300003784 Bacteria 8013
29 Ga0055534_1001916 3300003784 Bacteria 7673
30 Ga0055528_1001153 3300003790 Bacteria 17183
31 Ga0055530_10002224 3300003791 Bacteria 12789
32 Ga0055540_1000119 3300003792 Bacteria 82568
33 Ga0055541_1000001 3300003841 Bacteria 1111887
34 Ga0055541_1000653 3300003841 Bacteria 9095
35 Ga0070661_100000002 3300005344 Bacteria 265686
36 Ga0070661_100000390 3300005344 Bacteria 34236
37 Ga0070659_100000548 3300005366 Bacteria 27419
38 Ga0070667_100042366 3300005367 Bacteria 3820
39 Ga0070663_100000007 3300005455 Bacteria 202632
40 Ga0070665_100002509 3300005548 Bacteria 20173
41 Ga0070664_100000001 3300005564 Bacteria 551832
42 Ga0068857_100018091 3300005577 Bacteria 6182
43 Ga0068854_100000185 3300005578 Bacteria 42068
44 Ga0068856_100000007 3300005614 Bacteria 213669
45 Ga0068860_100000468 3300005843 Bacteria 50463
46 Ga0068862_100083537 3300005844 Bacteria 2773
47 Ga0099823_1001729 3300006944 Bacteria 18711
48 Ga0099826_10000028 3300006948 Bacteria 129794
49 Ga0099826_10000084 3300006948 Bacteria 46867
50 Ga0105245_10119813 3300009098 Bacteria 2457
51 Ga0105241_10001777 3300009174 Bacteria 16370
52 Ga0105248_10003535 3300009177 Bacteria 17336
53 Ga0105237_10010909 3300009545 Bacteria 9643
54 Ga0105237_10120968 3300009545 Bacteria 2613
55 Ga0105238_10056004 3300009551 Bacteria 3956
56 Ga0105249_10088700 3300009553 Bacteria 2889
57 Ga0105239_10023595 3300010375 Bacteria 6774
58 Ga0157371_10000035 3300013102 Bacteria 223396
59 Ga0157370_10010249 3300013104 Bacteria 9897
60 Ga0157370_10038417 3300013104 Bacteria 4630
61 Ga0157369_10000027 3300013105 Bacteria 213988
62 Ga0157374_10085611 3300013296 Bacteria 2997
63 Ga0157372_10000522 3300013307 Bacteria 42436
64 Ga0182008_10007877 3300014497 Bacteria 5849
65 Ga0182006_1001930 3300015261 Bacteria 11772
66 Ga0182006_1003491 3300015261 Bacteria 8024
67 Ga0182006_1014922 3300015261 Bacteria 3340
68 Ga0182007_10011485 3300015262 Bacteria 3446
69 Ga0163161_10001698 3300017792 Bacteria 16165
70 Ga0154015_1704164 3300020610 Bacteria 6155
71 Ga0209784_100004 3300025224 Bacteria 1378156
72 Ga0209784_100014 3300025224 Bacteria 496182
73 Ga0209784_100863 3300025224 Bacteria 6514
74 Ga0209566_100004 3300025225 Bacteria 1531866
75 Ga0209566_100011 3300025225 Bacteria 496182
76 Ga0209566_100882 3300025225 Bacteria 14552
77 Ga0209674_100006 3300025226 Bacteria 1531866
78 Ga0209674_100032 3300025226 Bacteria 426888
79 Ga0209674_100304 3300025226 Bacteria 33311
80 Ga0209672_100094 3300025228 Bacteria 113800
81 Ga0209147_100002 3300025229 Bacteria 2158988
82 Ga0209563_100009 3300025230 Bacteria 1378156
83 Ga0209563_100013 3300025230 Bacteria 941463
84 Ga0209563_100029 3300025230 Bacteria 496182
85 Ga0207427_100732 3300025231 Bacteria 15274
86 Ga0209437_100004 3300025233 Bacteria 1378156
87 Ga0209258_100002 3300025242 Bacteria 2158988
88 Ga0209646_1000035 3300025246 Bacteria 363209
89 Ga0209677_100005 3300025253 Bacteria 1378156
90 Ga0209677_100081 3300025253 Bacteria 120362
91 Ga0209148_1000158 3300025254 Bacteria 140830
92 Ga0209759_1001429 3300025256 Bacteria 13528
93 Ga0209233_1000005 3300025261 Bacteria 1531866
94 Ga0209565_1000042 3300025263 Bacteria 239712
95 Ga0209565_1000139 3300025263 Bacteria 101579
96 Ga0209455_1000009 3300025272 Bacteria 1042273
97 Ga0209673_1000071 3300025273 Bacteria 239966
98 Ga0209673_1006215 3300025273 Bacteria 5828
99 Ga0209130_1001865 3300025284 Bacteria 12060
100 Ga0209675_1000041 3300025291 Bacteria 239712
101 Ga0209675_1000160 3300025291 Bacteria 87175
102 Ga0209675_1002591 3300025291 Bacteria 9183
103 Ga0209675_1003451 3300025291 Bacteria 7510
104 Ga0209675_1004098 3300025291 Bacteria 6631
105 Ga0209676_1000064 3300025292 Bacteria 321700
106 Ga0209025_1000243 3300025294 Bacteria 128086
107 Ga0209025_1000668 3300025294 Bacteria 59317
108 Ga0209025_1002355 3300025294 Bacteria 20335
109 Ga0209025_1009906 3300025294 Bacteria 6551
110 Ga0209025_1033864 3300025294 Bacteria 2349
111 Ga0209564_1000107 3300025295 Bacteria 214040
112 Ga0209564_1000293 3300025295 Bacteria 101618
113 Ga0209564_1000351 3300025295 Bacteria 86736
114 Ga0209050_1000478 3300025298 Bacteria 70631
115 Ga0209050_1005561 3300025298 Bacteria 7846
116 Ga0209256_1000254 3300025299 Bacteria 94801
117 Ga0209256_1001429 3300025299 Bacteria 24744
118 Ga0209051_1000063 3300025303 Bacteria 249739
119 Ga0209051_1000777 3300025303 Bacteria 33839
120 Ga0209051_1007807 3300025303 Bacteria 5780
121 Ga0209257_1000118 3300025304 Bacteria 225963
122 Ga0209257_1011546 3300025304 Bacteria 4235
123 Ga0209257_1011967 3300025304 Bacteria 4087
124 Ga0207654_10034875 3300025911 Bacteria 2799
125 Ga0207695_10050736 3300025913 Bacteria 4362
126 Ga0207671_10001463 3300025914 Bacteria 27282
127 Ga0207657_10118564 3300025919 Bacteria 2179
128 Ga0207649_10006006 3300025920 Bacteria 6588
129 Ga0207649_10028191 3300025920 Bacteria 3304
130 Ga0207694_10000328 3300025924 Bacteria 44726
131 Ga0207690_10000794 3300025932 Bacteria 20353
132 Ga0207711_10003903 3300025941 Bacteria 12830
133 Ga0207679_10000003 3300025945 Bacteria 597553
134 Ga0207679_10023388 3300025945 Bacteria 4225
135 Ga0207667_10000055 3300025949 Bacteria 223770
136 Ga0207640_10000083 3300025981 Bacteria 74852
137 Ga0207703_10001680 3300026035 Bacteria 19905
138 Ga0207639_10113739 3300026041 Bacteria 2210
139 Ga0207678_10000002 3300026067 Bacteria 371723
140 Ga0207678_10009682 3300026067 Bacteria 8477
141 Ga0207702_10000080 3300026078 Bacteria 108289
142 Ga0207641_10000273 3300026088 Bacteria 65757
143 Ga0209281_1000160 3300027111 Bacteria 161071
144 Ga0209282_1000112 3300027666 Bacteria 53120
145 Ga0209282_1000115 3300027666 Bacteria 51607
146 Ga0268266_10004135 3300028379 Bacteria 14017
147 Ga0268266_10019201 3300028379 Bacteria 5821
148 Ga0268264_10000151 3300028381 Bacteria 158241
149 Ga0307510_10000003 3300033180 Bacteria 756654
150 Ga0373960_0003869 3300035121 Bacteria 3409
151 Ga0395899_0012742 3300037312 Bacteria 6442
152 Ga0395900_0007820 3300037418 Bacteria 11021
153 Ga0395900_0115141 3300037418 Bacteria 2759
154 Ga0395905_0000353 3300037471 Bacteria 65228
155 Ga0395905_0001835 3300037471 Bacteria 24545
156 Ga0395905_0065670 3300037471 Bacteria 3397
157 Ga0436361_0915965 3300039447 Bacteria 2378
158 Ga0466969_0000073 3300044656 Bacteria 52700
159 Ga0466969_0032964 3300044656 Bacteria 2632
160 Ga0466972_0010872 3300044658 Bacteria 4566
161 Ga0466961_0003932 3300044693 Bacteria 9289
162 Ga0466961_0014486 3300044693 Bacteria 5064
163 Ga0466964_0006779 3300044706 Bacteria 4269
164 Ga0466957_0051288 3300044842 Bacteria 2511
165 Ga0466959_0004819 3300045049 Bacteria 9113
166 Ga0466959_0005625 3300045049 Bacteria 8621
167 Ga0495592_0025144 3300046454 Bacteria 4521
168 Ga0495629_0029274 3300046459 Bacteria 3906
169 Ga0495653_0002550 3300046463 Bacteria 14520
170 Ga0495605_0004019 3300046474 Bacteria 8685
171 Ga0495596_0000123 3300046500 Bacteria 53547
172 Ga0495608_0030954 3300046511 Bacteria 3619
173 Ga0495610_0004170 3300046512 Bacteria 10810
174 Ga0495618_0033357 3300046514 Bacteria 3228
175 Ga0495628_0049679 3300046516 Bacteria 3320
176 Ga0495630_0028778 3300046517 Bacteria 4129
177 Ga0495666_0000519 3300046526 Bacteria 17141
178 Ga0495652_0003861 3300046529 Bacteria 14620
179 Ga0495665_0000877 3300046531 Bacteria 15747
180 Ga0495622_0001049 3300046557 Bacteria 14697
181 Ga0495625_0000877 3300046660 Bacteria 40871
182 Ga0495661_0003998 3300046665 Bacteria 10751
183 Ga0495599_0031586 3300046678 Bacteria 3323
184 Ga0495646_0016855 3300046680 Bacteria 4640
185 Ga0495624_0001884 3300046690 Bacteria 15971
186 Ga0495600_0000495 3300046809 Bacteria 20363
187 Ga0495581_0000817 3300047315 Bacteria 16566
188 Ga0495581_0069478 3300047315 Bacteria 2036
189 Ga0495604_0022058 3300047317 Bacteria 5082
190 Ga0496102_0011756 3300048905 Bacteria 7555
191 Ga0496116_0001385 3300048919 Bacteria 27333
192 Ga0496116_0005943 3300048919 Bacteria 11189
193 Ga0496117_0000186 3300048920 Bacteria 127231
194 Ga0496118_0000003 3300048921 Bacteria 773148
195 Ga0496119_0005689 3300048922 Bacteria 11822
196 Ga0496119_0024354 3300048922 Bacteria 4261
197 Ga0496121_0010359 3300048924 Bacteria 10529
198 Ga0496121_0016122 3300048924 Bacteria 7742
199 Ga0496122_0003540 3300048925 Bacteria 20423
200 Ga0496124_0030372 3300048927 Bacteria 4797
201 Ga0496125_0001701 3300048928 Bacteria 30700
202 Ga0496125_0029143 3300048928 Bacteria 4967
203 Ga0496126_0021122 3300048929 Bacteria 6366
204 Ga0501034_0000504 3300049571 Bacteria 62987
205 Ga0501047_0127927 3300049581 Bacteria 2420
206 Ga0501070_0051577 3300049586 Bacteria 3414
207 Ga0501073_0016496 3300049589 Bacteria 5354
208 Ga0501080_0001528 3300049742 Bacteria 19555
209 Ga0500595_000338 3300053119 Bacteria 30737
210 Ga0466962_0010019 3300061719 Bacteria 4548
211 2501082720 2501025502 Bacteria 9641094
212 2509126399 2508501125 Bacteria 7208311
213 2510248709 2510065045 Bacteria 7761063
214 2511090315 2510917013 Bacteria 9951648
215 2512349175 2512047030 Bacteria 9031815
216 2513560292 2513237083 Bacteria 8410967
217 2513958390 2513237151 Bacteria 6309801
218 2515680232 2515154122 Bacteria 8609520
219 2515692323 2515154123 Bacteria 6387382
220 2519461429 2519103095 Bacteria 6629912
221 2521557550 2521172590 Bacteria 5047645
222 2527077333 2526164713 Bacteria 6780608
223 2550694246 2548876994 Bacteria 4904866
224 2553006580 2551306416 Bacteria 6152985
225 2563060628 2562617112 Bacteria 10918404
226 2585290792 2582581311 Bacteria 6763856
227 2597029804 2596583598 Bacteria 5251611
228 2599446791 2599185178 Bacteria 5365746
229 2599745413 2599185240 Bacteria 7968121
230 2600207320 2599185355 Bacteria 7968906
231 2644243300 2643221644 Bacteria 6865017
232 2644325689 2643221658 Bacteria 6064537
233 2644466169 2643221683 Bacteria 5749203
234 2676741133 2675903129 Bacteria 7964495
235 2713475805 2711768613 Bacteria 11048459
236 2719642865 2718217991 Bacteria 7829542
237 2723875949 2721755763 Bacteria 4464185
238 2738819248 2738541296 Bacteria 7285013
239 2738831727 2738541298 Bacteria 7286732
240 2738873255 2738541306 Bacteria 7284992
241 2739184885 2738543002 Bacteria 7284546
242 2739219854 2738543008 Bacteria 7282815
243 2746097169 2744054901 Bacteria 8397047
244 2753570114 2751185846 Bacteria 7242164
245 2765570288 2765235838 Bacteria 5445269
246 2792835697 2791355137 Bacteria 9654227
247 2808967515 2808606384 Bacteria 8474373
248 2808984426 2808606386 Bacteria 4471946
249 2809002346 2808606390 Bacteria 8476311
250 2809009623 2808606391 Bacteria 8308166
251 2809130779 2808606415 Bacteria 4576710
252 2809149743 2808606419 Bacteria 4576925
253 2817258334 2816332253 Bacteria 6764532
254 2817281252 2816332256 Bacteria 6891714
255 2817452060 2816332286 Bacteria 6853759
256 2819540949 2818991436 Bacteria 5376622
257 2819594079 2818991445 Bacteria 4955017
258 2819615309 2818991449 Bacteria 5518009
259 2819620893 2818991450 Bacteria 6962147
260 2819634506 2818991452 Bacteria 8442785
261 2838054946 2838054893 Bacteria 7451788
262 2839096768 2839094727 Bacteria 5534556
263 2842328763 2842324504 Bacteria 9364110
264 2842353079 2842348783 Bacteria 9002918
265 2852620120 2852618963 Bacteria 4577824
266 2863422170 2863421361 Bacteria 7300805
267 2870075294 2870068957 Bacteria 8925310
268 2884816162 2884811622 Bacteria 5552861
269 2884839395 2884836552 Bacteria 5219991
270 2884856795 2884852848 Bacteria 5221161
271 2885267776 2885266251 Bacteria 4796748
272 2885278147 2885270888 Bacteria 9831543
273 2896158141 2896154374 Bacteria 5221518
274 2900577603 2900577576 Bacteria 5438534
275 2900636137 2900634093 Bacteria 10263517
276 2902688026 2902682994 Bacteria 8951596
277 2904489062 2904483920 Bacteria 7545285
278 2904564693 2904564687 Bacteria 7609577
279 2904572610 2904571731 Bacteria 7608790
280 2904625152 2904615490 Bacteria 10047340
281 2919051023 2919046199 Bacteria 5567169
282 2919529672 2919527303 Bacteria 7718827
283 2923513146 2923510766 Bacteria 5926163
284 2923516245 2923510766 Bacteria 5926163
285 2928057324 2928051484 Bacteria 7773759
286 2928061810 2928058823 Bacteria 5520022
287 2928109695 2928108538 Bacteria 7360024
288 2928135041 2928130867 Bacteria 5467269
289 2928136851 2928135762 Bacteria 7259641
290 2928167904 2928163908 Bacteria 7561269
291 2928175351 2928170801 Bacteria 8785406
292 2928506379 2928503688 Bacteria 7268108
293 2928537925 2928536128 Bacteria 7657547
294 2945914440 2945909444 Bacteria 7065066
295 2945940261 2945934425 Bacteria 7444609
296 2945990175 2945984333 Bacteria 7358892
297 2990707391 2990703756 Bacteria 7715990
298 642423832 641736151 Bacteria 7477263
299 642418931 641736154 Bacteria 7689995
300 642620400 642555113 Bacteria 8214658
301 8003957915 8003955200 Bacteria 8601927
302 8018848502 8018845410 Bacteria 8933938
303 8020810385 8020807995 Bacteria 6801506
304 8020941833 8020938398 Bacteria 7472757
305 8020945608 8020945358 Bacteria 8467355
306 8020958694 8020953355 Bacteria 7439080
307 8021121731 8021120328 Bacteria 8782274
308 8039104383 8039098773 Bacteria 6602928
309 8040167429 8040167225 Bacteria 6542727
310 8040175439 8040173305 Bacteria 6827067
311 8055269372 8055266321 Bacteria 7999742
312 8055303700 8055301274 Bacteria 8587385
313 Ga0070660_100093855
314 JGI24741J21665_1000215
315 JGI24740J21852_10001548
316 JGI25151J46595_10001215
317 JGI25165J46597_1000001
318 Ga0055538_1000001
319 Ga0055539_1000001
320 Ga0055539_1000321
321 Ga0055533_1000003
322 Ga0055533_1001358
323 Ga0055532_1000008
324 Ga0055525_1000003
325 Ga0055525_1000004
326 Ga0055525_1000169
327 Ga0055527_1001581
328 Ga0055535_1000006
329 Ga0055542_1001516
330 Ga0055529_1000025
331 Ga0055529_1000030
332 Ga0055526_1000250
333 Ga0055526_1006497
334 Ga0055526_1016181
335 Ga0055537_1000670
336 Ga0055524_1000131
337 Ga0055536_1000069
338 Ga0055534_1000008
339 Ga0055534_1001659
340 Ga0055534_1001808
341 Ga0055534_1001916
342 Ga0055528_1001153
343 Ga0055530_10002224
344 Ga0055540_1000119
345 Ga0055541_1000001
346 Ga0055541_1000653
347 Ga0070661_100000002
348 Ga0070661_100000390
349 Ga0070659_100000548
350 Ga0070667_100042366
351 Ga0070663_100000007
352 Ga0070665_100002509
353 Ga0070664_100000001
354 Ga0068857_100018091
355 Ga0068854_100000185
356 Ga0068856_100000007
357 Ga0068860_100000468
358 Ga0068862_100083537
359 Ga0099823_1001729
360 Ga0099826_10000028
361 Ga0099826_10000084
362 Ga0105245_10119813
363 Ga0105241_10001777
364 Ga0105248_10003535
365 Ga0105237_10010909
366 Ga0105237_10120968
367 Ga0105238_10056004
368 Ga0105249_10088700
369 Ga0105239_10023595
370 Ga0157371_10000035
371 Ga0157370_10010249
372 Ga0157370_10038417
373 Ga0157369_10000027
374 Ga0157374_10085611
375 Ga0157372_10000522
376 Ga0182008_10007877
377 Ga0182006_1001930
378 Ga0182006_1003491
379 Ga0182006_1014922
380 Ga0182007_10011485
381 Ga0163161_10001698
382 Ga0154015_1704164
383 Ga0209784_100004
384 Ga0209784_100014
385 Ga0209784_100863
386 Ga0209566_100004
387 Ga0209566_100011
388 Ga0209566_100882
389 Ga0209674_100006
390 Ga0209674_100032
391 Ga0209674_100304
392 Ga0209672_100094
393 Ga0209147_100002
394 Ga0209563_100009
395 Ga0209563_100013
396 Ga0209563_100029
397 Ga0207427_100732
398 Ga0209437_100004
399 Ga0209258_100002
400 Ga0209646_1000035
401 Ga0209677_100005
402 Ga0209677_100081
403 Ga0209148_1000158
404 Ga0209759_1001429
405 Ga0209233_1000005
406 Ga0209565_1000042
407 Ga0209565_1000139
408 Ga0209455_1000009
409 Ga0209673_1000071
410 Ga0209673_1006215
411 Ga0209130_1001865
412 Ga0209675_1000041
413 Ga0209675_1000160
414 Ga0209675_1002591
415 Ga0209675_1003451
416 Ga0209675_1004098
417 Ga0209676_1000064
418 Ga0209025_1000243
419 Ga0209025_1000668
420 Ga0209025_1002355
421 Ga0209025_1009906
422 Ga0209025_1033864
423 Ga0209564_1000107
424 Ga0209564_1000293
425 Ga0209564_1000351
426 Ga0209050_1000478
427 Ga0209050_1005561
428 Ga0209256_1000254
429 Ga0209256_1001429
430 Ga0209051_1000063
431 Ga0209051_1000777
432 Ga0209051_1007807
433 Ga0209257_1000118
434 Ga0209257_1011546
435 Ga0209257_1011967
436 Ga0207654_10034875
437 Ga0207695_10050736
438 Ga0207671_10001463
439 Ga0207657_10118564
440 Ga0207649_10006006
441 Ga0207649_10028191
442 Ga0207694_10000328
443 Ga0207690_10000794
444 Ga0207711_10003903
445 Ga0207679_10000003
446 Ga0207679_10023388
447 Ga0207667_10000055
448 Ga0207640_10000083
449 Ga0207703_10001680
450 Ga0207639_10113739
451 Ga0207678_10000002
452 Ga0207678_10009682
453 Ga0207702_10000080
454 Ga0207641_10000273
455 Ga0209281_1000160
456 Ga0209282_1000112
457 Ga0209282_1000115
458 Ga0268266_10004135
459 Ga0268266_10019201
460 Ga0268264_10000151
461 Ga0307510_10000003
462 Ga0373960_0003869
463 Ga0395899_0012742
464 Ga0395900_0007820
465 Ga0395900_0115141
466 Ga0395905_0000353
467 Ga0395905_0001835
468 Ga0395905_0065670
469 Ga0436361_0915965
470 Ga0466969_0000073
471 Ga0466969_0032964
472 Ga0466972_0010872
473 Ga0466961_0003932
474 Ga0466961_0014486
475 Ga0466964_0006779
476 Ga0466957_0051288
477 Ga0466959_0004819
478 Ga0466959_0005625
479 Ga0495592_0025144
480 Ga0495629_0029274
481 Ga0495653_0002550
482 Ga0495605_0004019
483 Ga0495596_0000123
484 Ga0495608_0030954
485 Ga0495610_0004170
486 Ga0495618_0033357
487 Ga0495628_0049679
488 Ga0495630_0028778
489 Ga0495666_0000519
490 Ga0495652_0003861
491 Ga0495665_0000877
492 Ga0495622_0001049
493 Ga0495625_0000877
494 Ga0495661_0003998
495 Ga0495599_0031586
496 Ga0495646_0016855
497 Ga0495624_0001884
498 Ga0495600_0000495
499 Ga0495581_0000817
500 Ga0495581_0069478
501 Ga0495604_0022058
502 Ga0496102_0011756
503 Ga0496116_0001385
504 Ga0496116_0005943
505 Ga0496117_0000186
506 Ga0496118_0000003
507 Ga0496119_0005689
508 Ga0496119_0024354
509 Ga0496121_0010359
510 Ga0496121_0016122
511 Ga0496122_0003540
512 Ga0496124_0030372
513 Ga0496125_0001701
514 Ga0496125_0029143
515 Ga0496126_0021122
516 Ga0501034_0000504
517 Ga0501047_0127927
518 Ga0501070_0051577
519 Ga0501073_0016496
520 Ga0501080_0001528
521 Ga0500595_000338
522 Ga0466962_0010019
523 2501082720
524 2509126399
525 2510248709
526 2511090315
527 2512349175
528 2513560292
529 2513958390
530 2515680232
531 2515692323
532 2519461429
533 2521557550
534 2527077333
535 2550694246
536 2553006580
537 2563060628
538 2585290792
539 2597029804
540 2599446791
541 2599745413
542 2600207320
543 2644243300
544 2644325689
545 2644466169
546 2676741133
547 2713475805
548 2719642865
549 2723875949
550 2738819248
551 2738831727
552 2738873255
553 2739184885
554 2739219854
555 2746097169
556 2753570114
557 2765570288
558 2792835697
559 2808967515
560 2808984426
561 2809002346
562 2809009623
563 2809130779
564 2809149743
565 2817258334
566 2817281252
567 2817452060
568 2819540949
569 2819594079
570 2819615309
571 2819620893
572 2819634506
573 2838054946
574 2839096768
575 2842328763
576 2842353079
577 2852620120
578 2863422170
579 2870075294
580 2884816162
581 2884839395
582 2884856795
583 2885267776
584 2885278147
585 2896158141
586 2900577603
587 2900636137
588 2902688026
589 2904489062
590 2904564693
591 2904572610
592 2904625152
593 2919051023
594 2919529672
595 2923513146
596 2923516245
597 2928057324
598 2928061810
599 2928109695
600 2928135041
601 2928136851
602 2928167904
603 2928175351
604 2928506379
605 2928537925
606 2945914440
607 2945940261
608 2945990175
609 2990707391
610 642423832
611 642418931
612 642620400
613 8003957915
614 8018848502
615 8020810385
616 8020941833
617 8020945608
618 8020958694
619 8021121731
620 8039104383
621 8040167429
622 8040175439
623 8055269372
624 8055303700

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00654

Voltage_CLC

Voltage gated chloride channel

62

397

0.97

PF00571

CBS

CBS domain

430

486

0.87

PF00571

CBS

CBS domain

496

550

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ad8-assembly2.cif.gz_B crystal structure of the e148d mutant clc-ec1 in 50 mm bromide 0.8874 15 428
6k5a-assembly1.cif.gz_B crystal structure of the e148d/r147a/f317a mutant in presence of 200 mm nabr 0.8863 14 428
3ejz-assembly1.cif.gz_A structure of e203v mutant e.coli cl-/h+ exchanger, clc-ec1 0.8795 11 435
2r9h-assembly1.cif.gz_B crystal structure of q207c mutant of clc-ec1 in complex with fab 0.8789 10 428
7cvs-assembly1.cif.gz_B crystal structure of the c85a/l194a mutant clc-ec1 with fab fragment 0.8785 11 428
ID Description Score Start End Superfamily
af_G5EGT4_111_616_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.8757 22 429 1.10.3080.10
af_P76175_1_418_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.8723 20 428 1.10.3080.10
af_A0A1D8PS75_151_627_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.8711 72 429 1.10.3080.10
3kpbA00 Alpha Beta;Roll;CBS-domain;CBS-domain 0.8676 444 566 3.10.580.10
af_K7VJQ9_107_604_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.8662 16 429 1.10.3080.10
ID Description Score Start End GO Terms
AF-A0A435RWN4-F1-model_v4 deleted 0.9549 37 376
AF-A0A3S1Q476-F1-model_v4 Chloride channel protein 0.9533 125 382 GO:0005247
GO:0016020
AF-A0A435RWN4-F1-model_v4 deleted 0.9441 37 376
AF-A0A3S1Q476-F1-model_v4 Chloride channel protein 0.9426 125 382 GO:0005247
GO:0016020
AF-A0A2X0IIZ7-F1-model_v4 Chloride channel protein 0.9385 20 442 GO:0005247
GO:0016020

Map