F401339

General Info

Members Datasets Scaffolds Average Seq Length
311 218 622 393

Family's Representative Sequence

Representative Sequence 3300044693|Ga0466961_0075669|Ga0466961_0075669_602_1894
Length 430
Sequence VNPSPAEATGFTPCWLPGVARCACDDFGVDVDVQGDRPARPGSGQALRLPAGFRANTGYAGLRDPGEGDDVTVVVSDRPCTTAAVFTKSLFAGPSVTLSRERAASRRARAVVIVAKNANVATGPEGRRDAEEITRLAADAVGLNADDVLVASTGVIGRPYPMPALRAHLGGLRSARFDADAYQVARAIMTTDTVPKVAEQIAGAARVVGVAKGVGMIEPDMATMLAFVFTDAEVEPSTLDGMWRRAVDETFNCLSVDTDTSTSDSAVVFANGAAGRVSDAALAIALREVCLDLTLQLARDGEGATKLLTVTVRAARDTRQAKRVAKAVVNSPLVKTAVHGADPNWGRVVMAVGKCQEETDIDPDRVVIRFGGMETYPDRPGTGGLDQLSEIMSADHVEIEVELGTGDAEATVYGCDLSAGYVRINADYTT

Samples

Sample ID Description Type Environment
1 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
23 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
24 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
25 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
36 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
44 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
49 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
50 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
51 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
72 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
73 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
103 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
104 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
105 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
106 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
107 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
108 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
109 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
110 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
111 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
112 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
113 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
114 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
115 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
116 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
117 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
118 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
119 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
120 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
121 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
122 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
123 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
124 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
125 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
126 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
127 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
128 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
129 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
130 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
131 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
132 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
133 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
134 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
135 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
136 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
137 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
138 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
139 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
140 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
141 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
142 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
143 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
144 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
145 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
146 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
147 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
150 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
151 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
152 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
163 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
164 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
165 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
166 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
167 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
168 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
169 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
172 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
173 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
174 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
177 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
178 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
179 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
180 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
181 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
182 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
183 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
184 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
185 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
186 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
187 2599185319 Pseudomonas sp. NFACC24-1 Isolate Rhizoplane
188 2599185323 Pseudomonas sp. NFACC37-1 Isolate Rhizoplane
189 2643221548 Streptomyces sp. Root55 Isolate Unclassified
190 2643221670 Streptomyces sp. Root431 Isolate Unclassified
191 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
192 2687453257 Planctomyces sp. SH-PL62 Isolate Unclassified
193 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
194 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
195 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
196 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
197 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
198 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
199 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
200 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
201 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
202 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
203 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
204 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
205 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
206 2913036834 Pseudomonas viciae 11K1 Isolate Rhizosphere
207 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere
208 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
209 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
210 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
211 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
212 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
213 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
214 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
215 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
216 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
217 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
218 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 89.39
Metatranscriptomes 0
Isolates 10.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.54
Nodule 0.64
Rhizoplane 7.4
Rhizosphere 81.99
Stem 0
Stem Tuber 0
Unclassified 0.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466961_0075669 3300044693 Bacteria 2134
2 JGI25406J46586_10000872 3300003203 Bacteria 14201
3 rootH1_10050864 3300003316 Bacteria 7016
4 rootH2_10020799 3300003320 Bacteria 15264
5 rootL2_10002434 3300003322 Bacteria 14724
6 Ga0065714_10088446 3300005288 Bacteria 2001
7 Ga0065704_10011313 3300005289 Bacteria 2392
8 Ga0065712_10000215 3300005290 Bacteria 22266
9 Ga0065712_10074916 3300005290 Bacteria 3980
10 Ga0065715_10002213 3300005293 Bacteria 5039
11 Ga0065707_10005071 3300005295 Bacteria 4958
12 Ga0070683_100009004 3300005329 Bacteria 8514
13 Ga0070683_100041630 3300005329 Bacteria 4227
14 Ga0070690_100062832 3300005330 Bacteria 2395
15 Ga0070670_100005453 3300005331 Bacteria 10728
16 Ga0070670_100012724 3300005331 Bacteria 7200
17 Ga0070687_100109965 3300005343 Unclassified 1558
18 Ga0070661_100078127 3300005344 Bacteria 2441
19 Ga0070668_100031349 3300005347 Bacteria 4044
20 Ga0070668_100167640 3300005347 Bacteria 1786
21 Ga0070675_100001551 3300005354 Bacteria 16997
22 Ga0070675_100006632 3300005354 Bacteria 8899
23 Ga0070675_100178529 3300005354 Bacteria 1835
24 Ga0070671_100023849 3300005355 Bacteria 5007
25 Ga0070673_100053763 3300005364 Bacteria 3165
26 Ga0070673_100061937 3300005364 Bacteria 2970
27 Ga0070688_100006372 3300005365 Bacteria 6307
28 Ga0070688_100006616 3300005365 Bacteria 6205
29 Ga0070688_100025920 3300005365 Bacteria 3477
30 Ga0070667_100238781 3300005367 Bacteria 1622
31 Ga0070667_100333425 3300005367 Bacteria 1371
32 Ga0070709_10000715 3300005434 Bacteria 18798
33 Ga0070714_100000057 3300005435 Bacteria 103150
34 Ga0070714_100153416 3300005435 Bacteria 2078
35 Ga0070713_100000715 3300005436 Bacteria 21289
36 Ga0070705_100000772 3300005440 Bacteria 18092
37 Ga0070694_100004140 3300005444 Bacteria 8719
38 Ga0070678_100005201 3300005456 Bacteria 7484
39 Ga0070662_100250735 3300005457 Bacteria 1423
40 Ga0070681_10001922 3300005458 Bacteria 18745
41 Ga0070685_10004387 3300005466 Bacteria 7124
42 Ga0070698_100039176 3300005471 Bacteria 4879
43 Ga0070699_100006042 3300005518 Bacteria 10588
44 Ga0070679_100106820 3300005530 Bacteria 2785
45 Ga0070672_100017805 3300005543 Bacteria 5121
46 Ga0070672_100033821 3300005543 Bacteria 3874
47 Ga0070686_100046962 3300005544 Bacteria 2728
48 Ga0070695_100000002 3300005545 Bacteria 128335
49 Ga0070696_100000679 3300005546 Bacteria 21808
50 Ga0070696_100005874 3300005546 Bacteria 8196
51 Ga0070665_100007844 3300005548 Bacteria 10827
52 Ga0070665_100072490 3300005548 Bacteria 3451
53 Ga0070704_100000924 3300005549 Bacteria 14800
54 Ga0070704_100053111 3300005549 Bacteria 2863
55 Ga0070664_100008781 3300005564 Bacteria 8186
56 Ga0070664_100040099 3300005564 Bacteria 3947
57 Ga0068859_100063728 3300005617 Bacteria 3717
58 Ga0068864_100009248 3300005618 Bacteria 8126
59 Ga0068866_10023891 3300005718 Bacteria 2849
60 Ga0068870_10007042 3300005840 Bacteria 4993
61 Ga0068870_10028964 3300005840 Bacteria 2786
62 Ga0068863_100010919 3300005841 Bacteria 8807
63 Ga0068858_100147234 3300005842 Bacteria 2212
64 Ga0068860_100014251 3300005843 Bacteria 7795
65 Ga0068860_100062811 3300005843 Bacteria 3529
66 Ga0068860_100079242 3300005843 Bacteria 3123
67 Ga0081539_10000024 3300005985 Bacteria 354702
68 Ga0075365_10030038 3300006038 Bacteria 3478
69 Ga0075365_10073907 3300006038 Bacteria 2298
70 Ga0075363_100021498 3300006048 Bacteria 3251
71 Ga0075364_10001047 3300006051 Bacteria 14718
72 Ga0075364_10007032 3300006051 Bacteria 6650
73 Ga0068871_100130977 3300006358 Bacteria 2126
74 Ga0075428_100004771 3300006844 Bacteria 15012
75 Ga0075428_100020052 3300006844 Bacteria 7404
76 Ga0075428_100173870 3300006844 Bacteria 2333
77 Ga0075428_100309353 3300006844 Bacteria 1698
78 Ga0075430_100023246 3300006846 Bacteria 5273
79 Ga0075431_100004985 3300006847 Bacteria 13063
80 Ga0075433_10009201 3300006852 Bacteria 7895
81 Ga0075433_10033440 3300006852 Bacteria 4408
82 Ga0075433_10038760 3300006852 Bacteria 4117
83 Ga0075433_10193518 3300006852 Bacteria 1809
84 Ga0075434_100000296 3300006871 Bacteria 35351
85 Ga0075434_100003170 3300006871 Bacteria 14663
86 Ga0075434_100197827 3300006871 Bacteria 2029
87 Ga0075434_100217745 3300006871 Bacteria 1929
88 Ga0075434_100318665 3300006871 Bacteria 1575
89 Ga0075429_100136699 3300006880 Bacteria 2145
90 Ga0097620_100063730 3300006931 Bacteria 3717
91 Ga0075435_100012209 3300007076 Bacteria 6353
92 Ga0111539_10000092 3300009094 Bacteria 94116
93 Ga0111539_10007343 3300009094 Bacteria 14114
94 Ga0111539_10013953 3300009094 Bacteria 10043
95 Ga0105245_10036549 3300009098 Bacteria 4363
96 Ga0114129_10034804 3300009147 Bacteria 7116
97 Ga0114129_10036075 3300009147 Bacteria 6984
98 Ga0114129_10180308 3300009147 Bacteria 2874
99 Ga0105243_10004916 3300009148 Bacteria 10478
100 Ga0105242_10007488 3300009176 Bacteria 8401
101 Ga0105248_10010247 3300009177 Bacteria 10319
102 Ga0105249_10107605 3300009553 Bacteria 2631
103 Ga0163162_10220723 3300013306 Bacteria 2025
104 Ga0157375_10218732 3300013308 Bacteria 2063
105 Ga0163163_10055140 3300014325 Bacteria 3928
106 Ga0213873_10006951 3300021358 Bacteria 2247
107 Ga0228598_1010666 3300024227 Bacteria 1829
108 Ga0207642_10021004 3300025899 Bacteria 2562
109 Ga0207699_10000019 3300025906 Bacteria 180307
110 Ga0207643_10027415 3300025908 Bacteria 3158
111 Ga0207643_10046454 3300025908 Bacteria 2455
112 Ga0207643_10121328 3300025908 Bacteria 1549
113 Ga0207707_10132716 3300025912 Bacteria 2178
114 Ga0207662_10049101 3300025918 Unclassified 2502
115 Ga0207662_10107131 3300025918 Bacteria 1739
116 Ga0207662_10107556 3300025918 Bacteria 1735
117 Ga0207649_10104380 3300025920 Bacteria 1882
118 Ga0207650_10005700 3300025925 Bacteria 8501
119 Ga0207650_10016856 3300025925 Bacteria 5110
120 Ga0207659_10073230 3300025926 Bacteria 2507
121 Ga0207659_10119805 3300025926 Bacteria 2015
122 Ga0207687_10147323 3300025927 Bacteria 1792
123 Ga0207700_10001193 3300025928 Bacteria 14938
124 Ga0207664_10000002 3300025929 Bacteria 657053
125 Ga0207664_10023357 3300025929 Bacteria 4631
126 Ga0207664_10067254 3300025929 Bacteria 2875
127 Ga0207691_10046074 3300025940 Bacteria 4009
128 Ga0207689_10054393 3300025942 Bacteria 3296
129 Ga0207661_10060006 3300025944 Bacteria 3067
130 Ga0207661_10233468 3300025944 Bacteria 1630
131 Ga0207679_10026799 3300025945 Bacteria 3979
132 Ga0207712_10077075 3300025961 Bacteria 2415
133 Ga0207668_10084828 3300025972 Bacteria 2309
134 Ga0207668_10135222 3300025972 Bacteria 1888
135 Ga0207640_10116801 3300025981 Bacteria 1903
136 Ga0207658_10216092 3300025986 Bacteria 1610
137 Ga0207703_10011600 3300026035 Bacteria 6852
138 Ga0207708_10021302 3300026075 Bacteria 4887
139 Ga0207641_10052191 3300026088 Bacteria 3462
140 Ga0207648_10003229 3300026089 Bacteria 17163
141 Ga0207676_10013420 3300026095 Bacteria 5885
142 Ga0207676_10240268 3300026095 Bacteria 1624
143 Ga0207683_10208630 3300026121 Bacteria 1777
144 Ga0207683_10259334 3300026121 Bacteria 1587
145 Ga0207428_10010141 3300027907 Bacteria 8425
146 Ga0268266_10087490 3300028379 Bacteria 2726
147 Ga0268265_10106526 3300028380 Bacteria 2277
148 Ga0268265_10190104 3300028380 Bacteria 1772
149 Ga0268264_10026315 3300028381 Bacteria 4752
150 Ga0268264_10062987 3300028381 Bacteria 3116
151 Ga0268264_10076303 3300028381 Bacteria 2851
152 Ga0307515_10179173 3300028794 Bacteria 2077
153 Ga0265327_10103181 3300031251 Bacteria 1373
154 Ga0316576_10050034 3300031727 Bacteria 3037
155 Ga0316576_10067779 3300031727 Bacteria 2628
156 Ga0307413_10037097 3300031824 Bacteria 2813
157 Ga0307410_10031398 3300031852 Bacteria 3408
158 Ga0307412_10031035 3300031911 Bacteria 3371
159 Ga0307416_100056095 3300032002 Bacteria 3177
160 Ga0307411_10057863 3300032005 Bacteria 2563
161 Ga0316574_0031442 3300035398 Bacteria 3220
162 Ga0436361_0276824 3300039447 Bacteria 4506
163 Ga0436362_1140649 3300039453 Bacteria 3132
164 Ga0439438_000695 3300041405 Bacteria 15015
165 Ga0439447_004735 3300041407 Bacteria 4635
166 Ga0439432_039189 3300042006 Bacteria 1507
167 Ga0439452_000538 3300042010 Bacteria 20273
168 Ga0451577_0000777 3300042876 Bacteria 47927
169 Ga0466966_0015513 3300044684 Bacteria 5036
170 Ga0453684_0003959 3300044712 Bacteria 32387
171 Ga0451576_0034829 3300045051 Bacteria 5346
172 Ga0451576_0054802 3300045051 Bacteria 4173
173 Ga0495629_0021011 3300046459 Bacteria 4658
174 Ga0495641_0045675 3300046461 Bacteria 2016
175 Ga0495643_0017537 3300046522 Bacteria 4182
176 Ga0495652_0172487 3300046529 Bacteria 1668
177 Ga0495640_0026469 3300046533 Bacteria 4191
178 Ga0495633_0022493 3300046558 Bacteria 3136
179 Ga0495634_0044856 3300046642 Bacteria 2990
180 Ga0495659_0004673 3300046664 Bacteria 4310
181 Ga0495659_0013546 3300046664 Bacteria 2657
182 Ga0495659_0047519 3300046664 Bacteria 1552
183 Ga0495588_0066602 3300046674 Bacteria 1869
184 Ga0495657_0001861 3300046675 Bacteria 17956
185 Ga0495657_0030068 3300046675 Bacteria 3806
186 Ga0495623_0043601 3300046679 Bacteria 2853
187 Ga0495658_0106065 3300046683 Bacteria 1684
188 Ga0495604_0012754 3300047317 Bacteria 6689
189 Ga0495604_0098032 3300047317 Bacteria 2160
190 Ga0495636_0033214 3300047318 Bacteria 2119
191 Ga0495676_0009801 3300047321 Bacteria 8702
192 Ga0495675_0019239 3300047444 Bacteria 4338
193 Ga0495677_0013885 3300047445 Bacteria 2932
194 Ga0495685_043632 3300047447 Bacteria 1530
195 Ga0496100_0064460 3300048903 Bacteria 2425
196 Ga0496100_0097838 3300048903 Bacteria 2016
197 Ga0496101_0174445 3300048904 Bacteria 1653
198 Ga0496102_0083903 3300048905 Bacteria 2940
199 Ga0496104_0011077 3300048907 Bacteria 8069
200 Ga0496104_0053061 3300048907 Bacteria 3830
201 Ga0496105_0096926 3300048908 Bacteria 2436
202 Ga0496108_0015193 3300048911 Bacteria 6281
203 Ga0496108_0099578 3300048911 Bacteria 2478
204 Ga0496109_0017197 3300048912 Bacteria 6333
205 Ga0496109_0019214 3300048912 Bacteria 6019
206 Ga0496109_0179123 3300048912 Bacteria 1990
207 Ga0496110_0001456 3300048913 Bacteria 17158
208 Ga0496110_0183016 3300048913 Bacteria 1903
209 Ga0496111_0045992 3300048914 Bacteria 3142
210 Ga0496111_0197489 3300048914 Bacteria 1496
211 Ga0496112_0068565 3300048915 Bacteria 3503
212 Ga0496113_0045782 3300048916 Bacteria 3246
213 Ga0496114_0111478 3300048917 Bacteria 2345
214 Ga0496114_0200856 3300048917 Bacteria 1746
215 Ga0496115_0092696 3300048918 Bacteria 2470
216 Ga0501031_0050691 3300049568 Bacteria 2704
217 Ga0501031_0225064 3300049568 Bacteria 1221
218 Ga0501032_0004822 3300049569 Bacteria 10113
219 Ga0501034_0018329 3300049571 Bacteria 7180
220 Ga0501034_0072878 3300049571 Bacteria 3443
221 Ga0501034_0250132 3300049571 Bacteria 1717
222 Ga0501036_0107642 3300049572 Bacteria 2357
223 Ga0501036_0156116 3300049572 Bacteria 1924
224 Ga0501037_0000458 3300049573 Bacteria 33156
225 Ga0501038_0085208 3300049574 Bacteria 2658
226 Ga0501038_0226661 3300049574 Bacteria 1489
227 Ga0501039_0078432 3300049575 Bacteria 2570
228 Ga0501039_0084515 3300049575 Bacteria 2472
229 Ga0501039_0158572 3300049575 Bacteria 1778
230 Ga0501041_0010242 3300049577 Bacteria 5525
231 Ga0501043_0008939 3300049579 Bacteria 7887
232 Ga0501048_0107627 3300049582 Bacteria 1968
233 Ga0501048_0124570 3300049582 Bacteria 1822
234 Ga0501071_0004238 3300049587 Bacteria 9084
235 Ga0501072_0012290 3300049588 Bacteria 6543
236 Ga0501072_0043712 3300049588 Bacteria 3522
237 Ga0501074_0011733 3300049590 Bacteria 6369
238 Ga0501075_0017282 3300049591 Bacteria 5209
239 Ga0501075_0041542 3300049591 Bacteria 3446
240 Ga0501075_0146331 3300049591 Bacteria 1801
241 Ga0501075_0323512 3300049591 Bacteria 1175
242 Ga0501076_0014063 3300049592 Bacteria 6016
243 Ga0501076_0171031 3300049592 Bacteria 1771
244 Ga0501079_0144069 3300049741 Bacteria 1857
245 Ga0501079_0200385 3300049741 Bacteria 1559
246 Ga0501080_0264569 3300049742 Bacteria 1566
247 Ga0501035_0071442 3300049822 Bacteria 3073
248 Ga0501044_0000221 3300049823 Bacteria 71970
249 Ga0501044_0116286 3300049823 Bacteria 2680
250 Ga0501045_0011704 3300049824 Bacteria 6163
251 Ga0501045_0072253 3300049824 Bacteria 2540
252 nmdc:mga03n38_24704_c1 3300050490 Bacteria 2459
253 nmdc:mga00v17_21392_c1 3300050491 Bacteria 3718
254 nmdc:mga00v17_23366_c1 3300050491 Bacteria 3576
255 nmdc:mga0yw44_199616_c1 3300050492 Bacteria 1321
256 nmdc:mga05p37_30323_c1 3300050507 Bacteria 6598
257 nmdc:mga05p37_74530_c1 3300050507 Bacteria 4177
258 nmdc:mga09592_14751_c1 3300050508 Bacteria 6376
259 nmdc:mga0qj67_68393_c1 3300050509 Bacteria 2831
260 nmdc:mga06r32_11876_c1 3300050510 Bacteria 7845
261 nmdc:mga06r32_98607_c1 3300050510 Bacteria 2865
262 nmdc:mga08y16_1058_c1 3300050511 Bacteria 27094
263 nmdc:mga08y16_3138_c1 3300050511 Bacteria 17111
264 nmdc:mga0n895_11425_c1 3300050512 Bacteria 7921
265 nmdc:mga0n895_193502_c1 3300050512 Bacteria 2065
266 nmdc:mga0n895_27746_c1 3300050512 Bacteria 5382
267 nmdc:mga0n895_74329_c1 3300050512 Bacteria 3376
268 nmdc:mga0rr50_6431_c1 3300050513 Bacteria 7151
269 nmdc:mga0a205_1038_c1 3300050515 Bacteria 23124
270 nmdc:mga0a205_112159_c1 3300050515 Bacteria 2626
271 nmdc:mga0a205_28844_c1 3300050515 Bacteria 5307
272 nmdc:mga0a205_63230_c1 3300050515 Bacteria 3576
273 Ga0495655_0000734 3300053083 Bacteria 5240
274 Ga0500616_0000347 3300053153 Bacteria 66034
275 Ga0500616_0003128 3300053153 Bacteria 12940
276 Ga0501082_0210482 3300060353 Bacteria 1692
277 Ga0530510_0090467 3300061734 Bacteria 2232
278 Ga0530510_0175824 3300061734 Bacteria 1586
279 2600044343 2599185319 Bacteria 6637840
280 2600067877 2599185323 Bacteria 6688755
281 2643760983 2643221548 Bacteria 8053412
282 2644386016 2643221670 Bacteria 6497041
283 2644462306 2643221682 Bacteria 6743283
284 2688069651 2687453257 Bacteria 6784659
285 2768642462 2767802112 Bacteria 6465194
286 2772646888 2772190715 Bacteria 6959372
287 2774395832 2773857762 Bacteria 5971770
288 2809199155 2808606439 Bacteria 5952208
289 2811846022 2808606982 Bacteria 7791042
290 2812348054 2811994878 Bacteria 5992952
291 2819746956 2818991472 Bacteria 10089953
292 2832009445 2832004796 Bacteria 6538017
293 2857293094 2857288857 Bacteria 7189066
294 2862711095 2862705112 Bacteria 6563286
295 2866071136 2866065130 Bacteria 6518152
296 2889418250 2889415604 Bacteria 8048700
297 2891968575 2891968417 Bacteria 5821697
298 2913036838 2913036834 Bacteria 6704877
299 2920115052 2920107658 Bacteria 10042636
300 2932401506 2932398195 Bacteria 3847976
301 2956941197 2956939328 Bacteria 3474458
302 2966599313 2966598605 Bacteria 7676064
303 2990049939 2990044586 Bacteria 6603797
304 3001120885 3001119090 Bacteria 3449530
305 8001787847 8001781756 Bacteria 9586736
306 8001788374 8001781756 Bacteria 9586736
307 8008485977 8008485437 Bacteria 7198341
308 8025525293 8025524527 Bacteria 7197316
309 8054166279 8054160619 Bacteria 7783213
310 8054728552 8054727385 Bacteria 7558670
311 8054734623 8054734606 Bacteria 6947278
312 Ga0466961_0075669
313 JGI25406J46586_10000872
314 rootH1_10050864
315 rootH2_10020799
316 rootL2_10002434
317 Ga0065714_10088446
318 Ga0065704_10011313
319 Ga0065712_10000215
320 Ga0065712_10074916
321 Ga0065715_10002213
322 Ga0065707_10005071
323 Ga0070683_100009004
324 Ga0070683_100041630
325 Ga0070690_100062832
326 Ga0070670_100005453
327 Ga0070670_100012724
328 Ga0070687_100109965
329 Ga0070661_100078127
330 Ga0070668_100031349
331 Ga0070668_100167640
332 Ga0070675_100001551
333 Ga0070675_100006632
334 Ga0070675_100178529
335 Ga0070671_100023849
336 Ga0070673_100053763
337 Ga0070673_100061937
338 Ga0070688_100006372
339 Ga0070688_100006616
340 Ga0070688_100025920
341 Ga0070667_100238781
342 Ga0070667_100333425
343 Ga0070709_10000715
344 Ga0070714_100000057
345 Ga0070714_100153416
346 Ga0070713_100000715
347 Ga0070705_100000772
348 Ga0070694_100004140
349 Ga0070678_100005201
350 Ga0070662_100250735
351 Ga0070681_10001922
352 Ga0070685_10004387
353 Ga0070698_100039176
354 Ga0070699_100006042
355 Ga0070679_100106820
356 Ga0070672_100017805
357 Ga0070672_100033821
358 Ga0070686_100046962
359 Ga0070695_100000002
360 Ga0070696_100000679
361 Ga0070696_100005874
362 Ga0070665_100007844
363 Ga0070665_100072490
364 Ga0070704_100000924
365 Ga0070704_100053111
366 Ga0070664_100008781
367 Ga0070664_100040099
368 Ga0068859_100063728
369 Ga0068864_100009248
370 Ga0068866_10023891
371 Ga0068870_10007042
372 Ga0068870_10028964
373 Ga0068863_100010919
374 Ga0068858_100147234
375 Ga0068860_100014251
376 Ga0068860_100062811
377 Ga0068860_100079242
378 Ga0081539_10000024
379 Ga0075365_10030038
380 Ga0075365_10073907
381 Ga0075363_100021498
382 Ga0075364_10001047
383 Ga0075364_10007032
384 Ga0068871_100130977
385 Ga0075428_100004771
386 Ga0075428_100020052
387 Ga0075428_100173870
388 Ga0075428_100309353
389 Ga0075430_100023246
390 Ga0075431_100004985
391 Ga0075433_10009201
392 Ga0075433_10033440
393 Ga0075433_10038760
394 Ga0075433_10193518
395 Ga0075434_100000296
396 Ga0075434_100003170
397 Ga0075434_100197827
398 Ga0075434_100217745
399 Ga0075434_100318665
400 Ga0075429_100136699
401 Ga0097620_100063730
402 Ga0075435_100012209
403 Ga0111539_10000092
404 Ga0111539_10007343
405 Ga0111539_10013953
406 Ga0105245_10036549
407 Ga0114129_10034804
408 Ga0114129_10036075
409 Ga0114129_10180308
410 Ga0105243_10004916
411 Ga0105242_10007488
412 Ga0105248_10010247
413 Ga0105249_10107605
414 Ga0163162_10220723
415 Ga0157375_10218732
416 Ga0163163_10055140
417 Ga0213873_10006951
418 Ga0228598_1010666
419 Ga0207642_10021004
420 Ga0207699_10000019
421 Ga0207643_10027415
422 Ga0207643_10046454
423 Ga0207643_10121328
424 Ga0207707_10132716
425 Ga0207662_10049101
426 Ga0207662_10107131
427 Ga0207662_10107556
428 Ga0207649_10104380
429 Ga0207650_10005700
430 Ga0207650_10016856
431 Ga0207659_10073230
432 Ga0207659_10119805
433 Ga0207687_10147323
434 Ga0207700_10001193
435 Ga0207664_10000002
436 Ga0207664_10023357
437 Ga0207664_10067254
438 Ga0207691_10046074
439 Ga0207689_10054393
440 Ga0207661_10060006
441 Ga0207661_10233468
442 Ga0207679_10026799
443 Ga0207712_10077075
444 Ga0207668_10084828
445 Ga0207668_10135222
446 Ga0207640_10116801
447 Ga0207658_10216092
448 Ga0207703_10011600
449 Ga0207708_10021302
450 Ga0207641_10052191
451 Ga0207648_10003229
452 Ga0207676_10013420
453 Ga0207676_10240268
454 Ga0207683_10208630
455 Ga0207683_10259334
456 Ga0207428_10010141
457 Ga0268266_10087490
458 Ga0268265_10106526
459 Ga0268265_10190104
460 Ga0268264_10026315
461 Ga0268264_10062987
462 Ga0268264_10076303
463 Ga0307515_10179173
464 Ga0265327_10103181
465 Ga0316576_10050034
466 Ga0316576_10067779
467 Ga0307413_10037097
468 Ga0307410_10031398
469 Ga0307412_10031035
470 Ga0307416_100056095
471 Ga0307411_10057863
472 Ga0316574_0031442
473 Ga0436361_0276824
474 Ga0436362_1140649
475 Ga0439438_000695
476 Ga0439447_004735
477 Ga0439432_039189
478 Ga0439452_000538
479 Ga0451577_0000777
480 Ga0466966_0015513
481 Ga0453684_0003959
482 Ga0451576_0034829
483 Ga0451576_0054802
484 Ga0495629_0021011
485 Ga0495641_0045675
486 Ga0495643_0017537
487 Ga0495652_0172487
488 Ga0495640_0026469
489 Ga0495633_0022493
490 Ga0495634_0044856
491 Ga0495659_0004673
492 Ga0495659_0013546
493 Ga0495659_0047519
494 Ga0495588_0066602
495 Ga0495657_0001861
496 Ga0495657_0030068
497 Ga0495623_0043601
498 Ga0495658_0106065
499 Ga0495604_0012754
500 Ga0495604_0098032
501 Ga0495636_0033214
502 Ga0495676_0009801
503 Ga0495675_0019239
504 Ga0495677_0013885
505 Ga0495685_043632
506 Ga0496100_0064460
507 Ga0496100_0097838
508 Ga0496101_0174445
509 Ga0496102_0083903
510 Ga0496104_0011077
511 Ga0496104_0053061
512 Ga0496105_0096926
513 Ga0496108_0015193
514 Ga0496108_0099578
515 Ga0496109_0017197
516 Ga0496109_0019214
517 Ga0496109_0179123
518 Ga0496110_0001456
519 Ga0496110_0183016
520 Ga0496111_0045992
521 Ga0496111_0197489
522 Ga0496112_0068565
523 Ga0496113_0045782
524 Ga0496114_0111478
525 Ga0496114_0200856
526 Ga0496115_0092696
527 Ga0501031_0050691
528 Ga0501031_0225064
529 Ga0501032_0004822
530 Ga0501034_0018329
531 Ga0501034_0072878
532 Ga0501034_0250132
533 Ga0501036_0107642
534 Ga0501036_0156116
535 Ga0501037_0000458
536 Ga0501038_0085208
537 Ga0501038_0226661
538 Ga0501039_0078432
539 Ga0501039_0084515
540 Ga0501039_0158572
541 Ga0501041_0010242
542 Ga0501043_0008939
543 Ga0501048_0107627
544 Ga0501048_0124570
545 Ga0501071_0004238
546 Ga0501072_0012290
547 Ga0501072_0043712
548 Ga0501074_0011733
549 Ga0501075_0017282
550 Ga0501075_0041542
551 Ga0501075_0146331
552 Ga0501075_0323512
553 Ga0501076_0014063
554 Ga0501076_0171031
555 Ga0501079_0144069
556 Ga0501079_0200385
557 Ga0501080_0264569
558 Ga0501035_0071442
559 Ga0501044_0000221
560 Ga0501044_0116286
561 Ga0501045_0011704
562 Ga0501045_0072253
563 nmdc:mga03n38_24704_c1
564 nmdc:mga00v17_21392_c1
565 nmdc:mga00v17_23366_c1
566 nmdc:mga0yw44_199616_c1
567 nmdc:mga05p37_30323_c1
568 nmdc:mga05p37_74530_c1
569 nmdc:mga09592_14751_c1
570 nmdc:mga0qj67_68393_c1
571 nmdc:mga06r32_11876_c1
572 nmdc:mga06r32_98607_c1
573 nmdc:mga08y16_1058_c1
574 nmdc:mga08y16_3138_c1
575 nmdc:mga0n895_11425_c1
576 nmdc:mga0n895_193502_c1
577 nmdc:mga0n895_27746_c1
578 nmdc:mga0n895_74329_c1
579 nmdc:mga0rr50_6431_c1
580 nmdc:mga0a205_1038_c1
581 nmdc:mga0a205_112159_c1
582 nmdc:mga0a205_28844_c1
583 nmdc:mga0a205_63230_c1
584 Ga0495655_0000734
585 Ga0500616_0000347
586 Ga0500616_0003128
587 Ga0501082_0210482
588 Ga0530510_0090467
589 Ga0530510_0175824
590 2600044343
591 2600067877
592 2643760983
593 2644386016
594 2644462306
595 2688069651
596 2768642462
597 2772646888
598 2774395832
599 2809199155
600 2811846022
601 2812348054
602 2819746956
603 2832009445
604 2857293094
605 2862711095
606 2866071136
607 2889418250
608 2891968575
609 2913036838
610 2920115052
611 2932401506
612 2956941197
613 2966599313
614 2990049939
615 3001120885
616 8001787847
617 8001788374
618 8008485977
619 8025525293
620 8054166279
621 8054728552
622 8054734623

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01960

ArgJ

ArgJ family

54

430

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3it4-assembly1.cif.gz_D the crystal structure of ornithine acetyltransferase from mycobacterium tuberculosis (rv1653) at 1.7 a 0.9643 177 382
3it4-assembly1.cif.gz_B the crystal structure of ornithine acetyltransferase from mycobacterium tuberculosis (rv1653) at 1.7 a 0.9526 181 382
1vra-assembly1.cif.gz_B crystal structure of arginine biosynthesis bifunctional protein argj (10175521) from bacillus halodurans at 2.00 a resolution 0.9507 177 385
3it4-assembly1.cif.gz_D the crystal structure of ornithine acetyltransferase from mycobacterium tuberculosis (rv1653) at 1.7 a 0.9501 177 382
1vra-assembly1.cif.gz_B crystal structure of arginine biosynthesis bifunctional protein argj (10175521) from bacillus halodurans at 2.00 a resolution 0.9292 177 385
ID Description Score Start End Superfamily
af_Q2G1H5_285_413_3.10.20.340 Alpha Beta;Roll;Ubiquitin-like (UB roll);ArgJ beta chain, C-terminal domain 0.975 259 387 3.10.20.340
af_Q2G1H5_285_413_3.10.20.340 Alpha Beta;Roll;Ubiquitin-like (UB roll);ArgJ beta chain, C-terminal domain 0.9676 259 387 3.10.20.340
3it6D01 Alpha Beta;2-Layer Sandwich;arginine biosynthesis bifunctional protein fold;arginine biosynthesis bifunctional protein suprefamily 0.9667 177 252 3.30.2330.10
af_O94346_311_445_3.10.20.340 Alpha Beta;Roll;Ubiquitin-like (UB roll);ArgJ beta chain, C-terminal domain 0.9627 259 387 3.10.20.340
af_Q54DY1_296_442_3.10.20.340 Alpha Beta;Roll;Ubiquitin-like (UB roll);ArgJ beta chain, C-terminal domain 0.9616 259 387 3.10.20.340
ID Description Score Start End GO Terms
AF-M3ATP3-F1-model_v4 Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein (EC 2.3.1.35) 0.9979 60 146 GO:0004042
GO:0004358
GO:0006526
GO:0006592
AF-A0A3N5GRB9-F1-model_v4 glutamate N-acetyltransferase (EC 2.3.1.35) 0.9836 94 387 GO:0004042
GO:0004358
GO:0006526
GO:0006592
AF-A0A7X5WMA9-F1-model_v4 deleted 0.9834 33 115
AF-A0A535B890-F1-model_v4 Arginine biosynthesis bifunctional protein ArgJ [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGSase)] 0.9823 251 387 GO:0004042
GO:0004358
GO:0005737
GO:0006526
GO:0006592
AF-A0A662CHR2-F1-model_v4 glutamate N-acetyltransferase (EC 2.3.1.35) 0.982 264 387 GO:0004042
GO:0004358
GO:0006526
GO:0006592

Map