F400801

General Info

Members Datasets Scaffolds Average Seq Length
310 180 620 412

Family's Representative Sequence

Representative Sequence 3300032002|Ga0307416_100337437|Ga0307416_1003374371
Length 448
Sequence VAAPTTFDAAFSPDRRPRLPELTRFASVTTRRGRLRLTGDGSLGVLVKRTLLTVFGFQLLLAIMLTLVDSYRRRGKKPKPFPTTPPGEVAIGESTVTTYTFGQHLYDDMLAAIAEAKQQVLFESYIWKGDEVGERFKRALAEAAGRGVEVYATYDGFANLVVSPLFKRFGPRMRVLEYPVYNAGWRFFDLRRYGRDHRKILVVDDRVAFVGGYNVGTAYATEWRDTHVRITGPGIWDLKRAFADFWNLNRRPRHGRPLLLETAADWDPRIRVHRNVPRLWMFPIRAMYIEAINRAFHHIYLTSAYFIPDTDFVYALKAAARRGVDVRLLVPATSNHVVADWLSRGYYGELLAAGVRIFRFQGAMVHAKTCTIDGEWSTVGTANIDRLSMTGNYEINVEFIDPAMAEQMERIFETDLSNAVELTRSEWDARGIHRKFTELVLAPLRPLL

Samples

Sample ID Description Type Environment
1 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
46 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
69 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
73 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
74 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
75 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
76 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
77 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
78 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
79 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
80 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
85 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
86 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
87 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
88 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
89 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
90 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
91 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
92 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
93 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
94 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
95 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
96 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
97 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
98 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
99 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
100 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
101 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
102 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
103 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
104 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
105 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
106 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
110 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
111 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
112 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
113 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
114 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
115 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
116 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
117 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
118 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
119 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
120 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
136 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
137 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
151 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
152 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
153 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
154 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
155 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
156 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
157 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
158 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
159 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
160 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
161 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
162 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
163 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
164 2643221561 Nocardioides sp. Root151 Isolate Unclassified
165 2643221576 Nocardioides sp. Root614 Isolate Unclassified
166 2643221590 Nocardioides sp. Root682 Isolate Unclassified
167 2643221604 Nocardioides sp. Root190 Isolate Unclassified
168 2643221615 Nocardioides sp. Root224 Isolate Unclassified
169 2643221617 Nocardioides sp. Root79 Isolate Unclassified
170 2643221620 Nocardioides sp. Root240 Isolate Unclassified
171 2643221641 Nocardioides sp. Root122 Isolate Unclassified
172 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
173 2643221696 Nocardioides sp. Root140 Isolate Unclassified
174 2738541305 Nocardioides sp. CF167 Isolate Unclassified
175 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
176 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
177 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
178 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
179 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
180 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.19
Metatranscriptomes 0.32
Isolates 5.48

Biome Distribution

Category Percentage (%)
Aerial Root 0.65
Bulb 0
Endosphere 10.65
Nodule 0.32
Rhizoplane 8.39
Rhizosphere 75.16
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307416_100337437 3300032002 Bacteria 1518
2 LJQas_1003518 3300000549 Bacteria 2092
3 JGI24740J21852_10036694 3300001979 Bacteria 1519
4 JGI24735J21928_10006757 3300002067 Bacteria 3763
5 Ga0070658_10104904 3300005327 Bacteria 2338
6 Ga0070683_100007862 3300005329 Bacteria 9033
7 Ga0070683_100014887 3300005329 Bacteria 6819
8 Ga0070683_100020239 3300005329 Bacteria 5920
9 Ga0070680_100112131 3300005336 Bacteria 2271
10 Ga0070682_100024501 3300005337 Bacteria 3592
11 Ga0070660_100012216 3300005339 Bacteria 6131
12 Ga0070660_100035934 3300005339 Bacteria 3751
13 Ga0070660_100053163 3300005339 Bacteria 3123
14 Ga0070660_100056584 3300005339 Bacteria 3035
15 Ga0070714_100016408 3300005435 Bacteria 5979
16 Ga0070662_100025619 3300005457 Bacteria 4075
17 Ga0070707_100116753 3300005468 Bacteria 2590
18 Ga0070698_100003098 3300005471 Bacteria 18331
19 Ga0070679_100006112 3300005530 Bacteria 11200
20 Ga0070684_100000534 3300005535 Bacteria 26083
21 Ga0070684_100176405 3300005535 Bacteria 1942
22 Ga0070693_100092619 3300005547 Bacteria 1825
23 Ga0070665_100000273 3300005548 Bacteria 84592
24 Ga0068855_100035511 3300005563 Bacteria 5938
25 Ga0068857_100006347 3300005577 Bacteria 10123
26 Ga0068856_100083294 3300005614 Bacteria 3176
27 Ga0070702_100027999 3300005615 Bacteria 3049
28 Ga0068852_100208021 3300005616 Bacteria 1855
29 Ga0081539_10023054 3300005985 Bacteria 4091
30 Ga0075365_10010556 3300006038 Bacteria 5385
31 Ga0075365_10048650 3300006038 Bacteria 2791
32 Ga0075365_10060086 3300006038 Bacteria 2535
33 Ga0075365_10102040 3300006038 Bacteria 1965
34 Ga0075368_10012036 3300006042 Bacteria 3159
35 Ga0075363_100002099 3300006048 Bacteria 7989
36 Ga0075363_100009537 3300006048 Bacteria 4565
37 Ga0075363_100009862 3300006048 Bacteria 4506
38 Ga0075363_100028239 3300006048 Bacteria 2884
39 Ga0075364_10020193 3300006051 Bacteria 4189
40 Ga0075364_10101977 3300006051 Bacteria 1911
41 Ga0075367_10003971 3300006178 Bacteria 7140
42 Ga0075370_10019371 3300006353 Bacteria 3706
43 Ga0075370_10092176 3300006353 Bacteria 1748
44 Ga0068865_100089090 3300006881 Bacteria 2234
45 Ga0105245_10013711 3300009098 Bacteria 7060
46 Ga0105245_10098368 3300009098 Bacteria 2703
47 Ga0114129_10495879 3300009147 Bacteria 1596
48 Ga0105243_10025679 3300009148 Bacteria 4505
49 Ga0105237_10215382 3300009545 Bacteria 1921
50 Ga0105238_10121301 3300009551 Bacteria 2594
51 Ga0105249_10043325 3300009553 Bacteria 4094
52 Ga0105239_10009129 3300010375 Bacteria 11218
53 Ga0105239_10084662 3300010375 Bacteria 3493
54 Ga0105239_10128779 3300010375 Bacteria 2814
55 Ga0105246_10006156 3300011119 Bacteria 7322
56 Ga0157369_10315621 3300013105 Bacteria 1625
57 Ga0157372_10020906 3300013307 Bacteria 7065
58 Ga0157375_10024149 3300013308 Bacteria 5622
59 Ga0157375_10340175 3300013308 Bacteria 1666
60 Ga0163163_10073944 3300014325 Bacteria 3399
61 Ga0182008_10014360 3300014497 Bacteria 4148
62 Ga0157379_10008950 3300014968 Bacteria 8727
63 Ga0163161_10091706 3300017792 Bacteria 2249
64 Ga0207688_10049855 3300025901 Bacteria 2341
65 Ga0207647_10017426 3300025904 Bacteria 4882
66 Ga0207707_10166975 3300025912 Bacteria 1923
67 Ga0207660_10062294 3300025917 Bacteria 2687
68 Ga0207657_10041902 3300025919 Bacteria 4044
69 Ga0207657_10066835 3300025919 Bacteria 3059
70 Ga0207657_10071729 3300025919 Bacteria 2932
71 Ga0207687_10154933 3300025927 Bacteria 1752
72 Ga0207664_10065933 3300025929 Bacteria 2900
73 Ga0207690_10025812 3300025932 Bacteria 3694
74 Ga0207706_10042335 3300025933 Bacteria 4037
75 Ga0207709_10117869 3300025935 Bacteria 1787
76 Ga0207691_10107877 3300025940 Bacteria 2478
77 Ga0207661_10008642 3300025944 Bacteria 7277
78 Ga0207661_10012110 3300025944 Bacteria 6266
79 Ga0207667_10224896 3300025949 Bacteria 1922
80 Ga0207712_10137143 3300025961 Bacteria 1872
81 Ga0207678_10109015 3300026067 Bacteria 2362
82 Ga0207708_10019578 3300026075 Bacteria 5102
83 Ga0207702_10320203 3300026078 Bacteria 1477
84 Ga0207676_10007852 3300026095 Bacteria 7590
85 Ga0207674_10011041 3300026116 Bacteria 10158
86 Ga0207675_100095604 3300026118 Bacteria 2795
87 Ga0207675_100260607 3300026118 Bacteria 1680
88 Ga0207683_10103201 3300026121 Bacteria 2547
89 Ga0207698_10041604 3300026142 Bacteria 3426
90 Ga0209813_10001238 3300027866 Bacteria 5696
91 Ga0209813_10019304 3300027866 Bacteria 1893
92 Ga0209974_10009633 3300027876 Bacteria 3277
93 Ga0268266_10007408 3300028379 Bacteria 9907
94 Ga0268264_10000417 3300028381 Bacteria 60164
95 Ga0307413_10008578 3300031824 Bacteria 4838
96 Ga0307410_10011889 3300031852 Bacteria 5003
97 Ga0307410_10095999 3300031852 Bacteria 2115
98 Ga0307407_10008562 3300031903 Bacteria 4705
99 Ga0307407_10058486 3300031903 Bacteria 2241
100 Ga0307412_10024246 3300031911 Bacteria 3744
101 Ga0307409_100069406 3300031995 Bacteria 2792
102 Ga0307416_100009796 3300032002 Bacteria 6296
103 Ga0307416_100039129 3300032002 Bacteria 3668
104 Ga0307416_100201627 3300032002 Bacteria 1888
105 Ga0307416_100264924 3300032002 Bacteria 1682
106 Ga0307414_10131886 3300032004 Bacteria 1941
107 Ga0307414_10165085 3300032004 Bacteria 1764
108 Ga0307411_10056896 3300032005 Bacteria 2580
109 Ga0307415_100012122 3300032126 Bacteria 4972
110 Ga0307415_100066310 3300032126 Bacteria 2519
111 Ga0373931_0073043 3300035691 Bacteria 1877
112 Ga0395900_0004933 3300037418 Bacteria 14051
113 Ga0395900_0025937 3300037418 Bacteria 6001
114 Ga0395900_0029694 3300037418 Bacteria 5610
115 Ga0395900_0099435 3300037418 Bacteria 2988
116 Ga0395900_0314335 3300037418 Bacteria 1549
117 Ga0395898_0007090 3300037466 Bacteria 11907
118 Ga0395901_0032756 3300038443 Bacteria 5362
119 Ga0395901_0070406 3300038443 Bacteria 3644
120 Ga0395901_0142014 3300038443 Bacteria 2523
121 Ga0395901_0170062 3300038443 Bacteria 2287
122 Ga0436360_0498084 3300039438 Bacteria 2084
123 Ga0451797_0071409 3300041453 Bacteria 1715
124 Ga0439457_017699 3300042014 Bacteria 1582
125 Ga0439446_0016594 3300042156 Bacteria 2052
126 Ga0439434_0005904 3300042435 Bacteria 3577
127 Ga0466969_0028538 3300044656 Bacteria 2852
128 Ga0466972_0020367 3300044658 Bacteria 3316
129 Ga0466972_0044758 3300044658 Bacteria 2146
130 Ga0466972_0125966 3300044658 Bacteria 1207
131 Ga0466965_0001820 3300044683 Bacteria 8858
132 Ga0466965_0009976 3300044683 Bacteria 4418
133 Ga0466965_0011063 3300044683 Bacteria 4219
134 Ga0466965_0081327 3300044683 Bacteria 1638
135 Ga0466966_0049071 3300044684 Bacteria 2689
136 Ga0466966_0075872 3300044684 Bacteria 2100
137 Ga0466961_0039271 3300044693 Bacteria 3034
138 Ga0466961_0067185 3300044693 Bacteria 2277
139 Ga0466961_0089288 3300044693 Bacteria 1946
140 Ga0466963_0051612 3300044694 Bacteria 2726
141 Ga0466964_0016663 3300044706 Bacteria 2807
142 Ga0466968_0014517 3300044735 Bacteria 3113
143 Ga0466968_0035501 3300044735 Bacteria 2087
144 Ga0466970_0012238 3300044765 Bacteria 4383
145 Ga0466970_0020332 3300044765 Bacteria 3448
146 Ga0466970_0030463 3300044765 Bacteria 2845
147 Ga0466970_0035135 3300044765 Bacteria 2656
148 Ga0466970_0050048 3300044765 Bacteria 2228
149 Ga0466970_0084404 3300044765 Bacteria 1719
150 Ga0466957_0012523 3300044842 Bacteria 4909
151 Ga0466957_0144208 3300044842 Bacteria 1536
152 Ga0466960_0003592 3300044901 Bacteria 5983
153 Ga0466960_0068925 3300044901 Bacteria 1756
154 Ga0466960_0146863 3300044901 Bacteria 1256
155 Ga0466959_0024604 3300045049 Bacteria 4461
156 Ga0466959_0097175 3300045049 Bacteria 2111
157 Ga0451576_0221346 3300045051 Bacteria 1976
158 Ga0466958_0028432 3300045836 Bacteria 3315
159 Ga0466967_0003031 3300045976 Bacteria 10780
160 Ga0466967_0015459 3300045976 Bacteria 5983
161 Ga0466967_0064893 3300045976 Bacteria 3248
162 Ga0495664_0038551 3300046477 Bacteria 2821
163 Ga0495635_0074910 3300046663 Bacteria 2319
164 Ga0496100_0205259 3300048903 Bacteria 1438
165 Ga0496101_0056501 3300048904 Bacteria 2838
166 Ga0496102_0113716 3300048905 Bacteria 2525
167 Ga0496102_0324488 3300048905 Bacteria 1450
168 Ga0496105_0000120 3300048908 Bacteria 53984
169 Ga0496105_0066118 3300048908 Bacteria 2984
170 Ga0496106_0030923 3300048909 Bacteria 3991
171 Ga0496106_0044117 3300048909 Bacteria 3346
172 Ga0496106_0220774 3300048909 Bacteria 1512
173 Ga0496108_0004349 3300048911 Bacteria 11393
174 Ga0496108_0190167 3300048911 Bacteria 1779
175 Ga0496109_0059250 3300048912 Bacteria 3498
176 Ga0496109_0096556 3300048912 Bacteria 2738
177 Ga0496109_0129122 3300048912 Bacteria 2358
178 Ga0496109_0393791 3300048912 Bacteria 1309
179 Ga0496111_0002064 3300048914 Bacteria 11967
180 Ga0496111_0104403 3300048914 Bacteria 2085
181 Ga0496111_0179785 3300048914 Bacteria 1572
182 Ga0496112_0223907 3300048915 Bacteria 1837
183 Ga0496114_0018432 3300048917 Bacteria 5643
184 Ga0496114_0030325 3300048917 Bacteria 4449
185 Ga0496114_0112496 3300048917 Bacteria 2334
186 Ga0496114_0211495 3300048917 Bacteria 1701
187 Ga0496115_0020910 3300048918 Bacteria 5051
188 Ga0496115_0054282 3300048918 Bacteria 3218
189 Ga0496124_0030219 3300048927 Bacteria 4812
190 Ga0501310_000066 3300049130 Bacteria 9705
191 Ga0501298_013118 3300049521 Bacteria 1462
192 Ga0501031_0035777 3300049568 Bacteria 3240
193 Ga0501031_0059622 3300049568 Bacteria 2487
194 Ga0501031_0069045 3300049568 Bacteria 2302
195 Ga0501032_0024341 3300049569 Bacteria 4182
196 Ga0501032_0032855 3300049569 Bacteria 3555
197 Ga0501032_0042339 3300049569 Bacteria 3089
198 Ga0501033_0002202 3300049570 Bacteria 16819
199 Ga0501034_0017347 3300049571 Bacteria 7384
200 Ga0501034_0019879 3300049571 Bacteria 6861
201 Ga0501034_0021068 3300049571 Bacteria 6653
202 Ga0501036_0001691 3300049572 Bacteria 17131
203 Ga0501036_0003185 3300049572 Bacteria 13098
204 Ga0501037_0010561 3300049573 Bacteria 6783
205 Ga0501037_0010711 3300049573 Bacteria 6737
206 Ga0501038_0005316 3300049574 Bacteria 11964
207 Ga0501038_0061493 3300049574 Bacteria 3211
208 Ga0501038_0213658 3300049574 Bacteria 1542
209 Ga0501039_0008673 3300049575 Bacteria 7744
210 Ga0501039_0023867 3300049575 Bacteria 4696
211 Ga0501039_0034514 3300049575 Bacteria 3904
212 Ga0501039_0050923 3300049575 Bacteria 3205
213 Ga0501039_0084462 3300049575 Bacteria 2472
214 Ga0501040_0100627 3300049576 Bacteria 2015
215 Ga0501041_0007646 3300049577 Bacteria 6347
216 Ga0501042_0087203 3300049578 Bacteria 2239
217 Ga0501042_0156508 3300049578 Bacteria 1644
218 Ga0501042_0186094 3300049578 Bacteria 1498
219 Ga0501043_0004039 3300049579 Bacteria 11998
220 Ga0501043_0041759 3300049579 Bacteria 3603
221 Ga0501046_0000617 3300049580 Bacteria 34979
222 Ga0501046_0017993 3300049580 Bacteria 5890
223 Ga0501046_0080900 3300049580 Bacteria 2509
224 Ga0501046_0270316 3300049580 Bacteria 1247
225 Ga0501047_0027112 3300049581 Bacteria 5519
226 Ga0501047_0050228 3300049581 Bacteria 4027
227 Ga0501048_0018171 3300049582 Bacteria 5172
228 Ga0501067_0002195 3300049583 Bacteria 10774
229 Ga0501067_0003857 3300049583 Bacteria 8276
230 Ga0501067_0064848 3300049583 Bacteria 2022
231 Ga0501067_0079414 3300049583 Bacteria 1818
232 Ga0501067_0125059 3300049583 Bacteria 1431
233 Ga0501068_0026941 3300049584 Bacteria 3391
234 Ga0501068_0058271 3300049584 Bacteria 2343
235 Ga0501069_0002402 3300049585 Bacteria 9512
236 Ga0501069_0027501 3300049585 Bacteria 3116
237 Ga0501069_0035847 3300049585 Bacteria 2734
238 Ga0501069_0067347 3300049585 Bacteria 2003
239 Ga0501070_0001044 3300049586 Bacteria 24944
240 Ga0501070_0023980 3300049586 Bacteria 5115
241 Ga0501070_0026122 3300049586 Bacteria 4900
242 Ga0501070_0061334 3300049586 Bacteria 3115
243 Ga0501070_0064841 3300049586 Bacteria 3024
244 Ga0501070_0085043 3300049586 Bacteria 2619
245 Ga0501071_0005001 3300049587 Bacteria 8473
246 Ga0501071_0022011 3300049587 Bacteria 4443
247 Ga0501071_0030443 3300049587 Bacteria 3817
248 Ga0501071_0211241 3300049587 Bacteria 1459
249 Ga0501072_0027072 3300049588 Bacteria 4474
250 Ga0501072_0078303 3300049588 Bacteria 2617
251 Ga0501072_0191071 3300049588 Bacteria 1633
252 Ga0501073_0041824 3300049589 Bacteria 3237
253 Ga0501074_0000839 3300049590 Bacteria 19548
254 Ga0501074_0006707 3300049590 Bacteria 8307
255 Ga0501074_0007245 3300049590 Bacteria 8013
256 Ga0501074_0060695 3300049590 Bacteria 2724
257 Ga0501074_0093527 3300049590 Bacteria 2153
258 Ga0501076_0083924 3300049592 Bacteria 2559
259 Ga0501076_0118830 3300049592 Bacteria 2140
260 Ga0501077_0041270 3300049593 Bacteria 2938
261 Ga0501079_0077750 3300049741 Bacteria 2567
262 Ga0501080_0011766 3300049742 Bacteria 8020
263 Ga0501080_0033037 3300049742 Bacteria 4828
264 Ga0501080_0152243 3300049742 Bacteria 2137
265 Ga0501083_0017129 3300049744 Bacteria 5055
266 Ga0501083_0021831 3300049744 Bacteria 4446
267 Ga0501035_0010670 3300049822 Bacteria 8504
268 Ga0501044_0070736 3300049823 Bacteria 3548
269 Ga0501045_0150220 3300049824 Bacteria 1733
270 nmdc:mga03n38_16823_c1 3300050490 Bacteria 2854
271 nmdc:mga03n38_19177_c1 3300050490 Bacteria 2713
272 nmdc:mga03n38_6940_c1 3300050490 Bacteria 3974
273 nmdc:mga00v17_38642_c1 3300050491 Bacteria 2855
274 nmdc:mga00v17_51022_c1 3300050491 Bacteria 2515
275 nmdc:mga00v17_94827_c1 3300050491 Bacteria 1878
276 nmdc:mga00v17_96275_c1 3300050491 Bacteria 1864
277 nmdc:mga0yw44_154880_c1 3300050492 Bacteria 1497
278 nmdc:mga0yw44_29774_c1 3300050492 Bacteria 3156
279 nmdc:mga0yw44_3579_c1 3300050492 Bacteria 6926
280 nmdc:mga04h51_11197_c1 3300050495 Bacteria 2484
281 nmdc:mga04h51_20591_c1 3300050495 Bacteria 1972
282 nmdc:mga07m45_49046_c1 3300050496 Bacteria 2376
283 nmdc:mga07m45_69127_c1 3300050496 Bacteria 2008
284 nmdc:mga08y16_193232_c1 3300050511 Bacteria 2110
285 Ga0495601_0023047 3300053077 Bacteria 3825
286 Ga0495595_0035876 3300053084 Bacteria 2248
287 Ga0500644_0000502 3300053088 Bacteria 16881
288 Ga0500593_000305 3300053117 Bacteria 19941
289 Ga0500620_011602 3300053155 Bacteria 2369
290 Ga0501084_0012896 3300054114 Bacteria 6921
291 Ga0501084_0049103 3300054114 Bacteria 3532
292 Ga0501082_0061038 3300060353 Bacteria 3245
293 Ga0501082_0084037 3300060353 Bacteria 2746
294 2643825750 2643221561 Bacteria 4984412
295 2643888833 2643221576 Bacteria 5214352
296 2643957888 2643221590 Bacteria 5214697
297 2644034396 2643221604 Bacteria 5014917
298 2644089347 2643221615 Bacteria 5487866
299 2644098557 2643221617 Bacteria 5139111
300 2644114584 2643221620 Bacteria 5134593
301 2644229342 2643221641 Bacteria 4490190
302 2644319192 2643221657 Bacteria 5490246
303 2644531742 2643221696 Bacteria 5431823
304 2738869828 2738541305 Bacteria 4910150
305 2812332529 2811994874 Bacteria 5367947
306 2855386962 2855386786 Bacteria 4752232
307 2857484817 2857481737 Bacteria 4761446
308 2984580272 2984576629 Bacteria 4248407
309 2990259122 2990256926 Bacteria 4252839
310 8054612864 8054609563 Bacteria 5170090
311 Ga0307416_100337437
312 LJQas_1003518
313 JGI24740J21852_10036694
314 JGI24735J21928_10006757
315 Ga0070658_10104904
316 Ga0070683_100007862
317 Ga0070683_100014887
318 Ga0070683_100020239
319 Ga0070680_100112131
320 Ga0070682_100024501
321 Ga0070660_100012216
322 Ga0070660_100035934
323 Ga0070660_100053163
324 Ga0070660_100056584
325 Ga0070714_100016408
326 Ga0070662_100025619
327 Ga0070707_100116753
328 Ga0070698_100003098
329 Ga0070679_100006112
330 Ga0070684_100000534
331 Ga0070684_100176405
332 Ga0070693_100092619
333 Ga0070665_100000273
334 Ga0068855_100035511
335 Ga0068857_100006347
336 Ga0068856_100083294
337 Ga0070702_100027999
338 Ga0068852_100208021
339 Ga0081539_10023054
340 Ga0075365_10010556
341 Ga0075365_10048650
342 Ga0075365_10060086
343 Ga0075365_10102040
344 Ga0075368_10012036
345 Ga0075363_100002099
346 Ga0075363_100009537
347 Ga0075363_100009862
348 Ga0075363_100028239
349 Ga0075364_10020193
350 Ga0075364_10101977
351 Ga0075367_10003971
352 Ga0075370_10019371
353 Ga0075370_10092176
354 Ga0068865_100089090
355 Ga0105245_10013711
356 Ga0105245_10098368
357 Ga0114129_10495879
358 Ga0105243_10025679
359 Ga0105237_10215382
360 Ga0105238_10121301
361 Ga0105249_10043325
362 Ga0105239_10009129
363 Ga0105239_10084662
364 Ga0105239_10128779
365 Ga0105246_10006156
366 Ga0157369_10315621
367 Ga0157372_10020906
368 Ga0157375_10024149
369 Ga0157375_10340175
370 Ga0163163_10073944
371 Ga0182008_10014360
372 Ga0157379_10008950
373 Ga0163161_10091706
374 Ga0207688_10049855
375 Ga0207647_10017426
376 Ga0207707_10166975
377 Ga0207660_10062294
378 Ga0207657_10041902
379 Ga0207657_10066835
380 Ga0207657_10071729
381 Ga0207687_10154933
382 Ga0207664_10065933
383 Ga0207690_10025812
384 Ga0207706_10042335
385 Ga0207709_10117869
386 Ga0207691_10107877
387 Ga0207661_10008642
388 Ga0207661_10012110
389 Ga0207667_10224896
390 Ga0207712_10137143
391 Ga0207678_10109015
392 Ga0207708_10019578
393 Ga0207702_10320203
394 Ga0207676_10007852
395 Ga0207674_10011041
396 Ga0207675_100095604
397 Ga0207675_100260607
398 Ga0207683_10103201
399 Ga0207698_10041604
400 Ga0209813_10001238
401 Ga0209813_10019304
402 Ga0209974_10009633
403 Ga0268266_10007408
404 Ga0268264_10000417
405 Ga0307413_10008578
406 Ga0307410_10011889
407 Ga0307410_10095999
408 Ga0307407_10008562
409 Ga0307407_10058486
410 Ga0307412_10024246
411 Ga0307409_100069406
412 Ga0307416_100009796
413 Ga0307416_100039129
414 Ga0307416_100201627
415 Ga0307416_100264924
416 Ga0307414_10131886
417 Ga0307414_10165085
418 Ga0307411_10056896
419 Ga0307415_100012122
420 Ga0307415_100066310
421 Ga0373931_0073043
422 Ga0395900_0004933
423 Ga0395900_0025937
424 Ga0395900_0029694
425 Ga0395900_0099435
426 Ga0395900_0314335
427 Ga0395898_0007090
428 Ga0395901_0032756
429 Ga0395901_0070406
430 Ga0395901_0142014
431 Ga0395901_0170062
432 Ga0436360_0498084
433 Ga0451797_0071409
434 Ga0439457_017699
435 Ga0439446_0016594
436 Ga0439434_0005904
437 Ga0466969_0028538
438 Ga0466972_0020367
439 Ga0466972_0044758
440 Ga0466972_0125966
441 Ga0466965_0001820
442 Ga0466965_0009976
443 Ga0466965_0011063
444 Ga0466965_0081327
445 Ga0466966_0049071
446 Ga0466966_0075872
447 Ga0466961_0039271
448 Ga0466961_0067185
449 Ga0466961_0089288
450 Ga0466963_0051612
451 Ga0466964_0016663
452 Ga0466968_0014517
453 Ga0466968_0035501
454 Ga0466970_0012238
455 Ga0466970_0020332
456 Ga0466970_0030463
457 Ga0466970_0035135
458 Ga0466970_0050048
459 Ga0466970_0084404
460 Ga0466957_0012523
461 Ga0466957_0144208
462 Ga0466960_0003592
463 Ga0466960_0068925
464 Ga0466960_0146863
465 Ga0466959_0024604
466 Ga0466959_0097175
467 Ga0451576_0221346
468 Ga0466958_0028432
469 Ga0466967_0003031
470 Ga0466967_0015459
471 Ga0466967_0064893
472 Ga0495664_0038551
473 Ga0495635_0074910
474 Ga0496100_0205259
475 Ga0496101_0056501
476 Ga0496102_0113716
477 Ga0496102_0324488
478 Ga0496105_0000120
479 Ga0496105_0066118
480 Ga0496106_0030923
481 Ga0496106_0044117
482 Ga0496106_0220774
483 Ga0496108_0004349
484 Ga0496108_0190167
485 Ga0496109_0059250
486 Ga0496109_0096556
487 Ga0496109_0129122
488 Ga0496109_0393791
489 Ga0496111_0002064
490 Ga0496111_0104403
491 Ga0496111_0179785
492 Ga0496112_0223907
493 Ga0496114_0018432
494 Ga0496114_0030325
495 Ga0496114_0112496
496 Ga0496114_0211495
497 Ga0496115_0020910
498 Ga0496115_0054282
499 Ga0496124_0030219
500 Ga0501310_000066
501 Ga0501298_013118
502 Ga0501031_0035777
503 Ga0501031_0059622
504 Ga0501031_0069045
505 Ga0501032_0024341
506 Ga0501032_0032855
507 Ga0501032_0042339
508 Ga0501033_0002202
509 Ga0501034_0017347
510 Ga0501034_0019879
511 Ga0501034_0021068
512 Ga0501036_0001691
513 Ga0501036_0003185
514 Ga0501037_0010561
515 Ga0501037_0010711
516 Ga0501038_0005316
517 Ga0501038_0061493
518 Ga0501038_0213658
519 Ga0501039_0008673
520 Ga0501039_0023867
521 Ga0501039_0034514
522 Ga0501039_0050923
523 Ga0501039_0084462
524 Ga0501040_0100627
525 Ga0501041_0007646
526 Ga0501042_0087203
527 Ga0501042_0156508
528 Ga0501042_0186094
529 Ga0501043_0004039
530 Ga0501043_0041759
531 Ga0501046_0000617
532 Ga0501046_0017993
533 Ga0501046_0080900
534 Ga0501046_0270316
535 Ga0501047_0027112
536 Ga0501047_0050228
537 Ga0501048_0018171
538 Ga0501067_0002195
539 Ga0501067_0003857
540 Ga0501067_0064848
541 Ga0501067_0079414
542 Ga0501067_0125059
543 Ga0501068_0026941
544 Ga0501068_0058271
545 Ga0501069_0002402
546 Ga0501069_0027501
547 Ga0501069_0035847
548 Ga0501069_0067347
549 Ga0501070_0001044
550 Ga0501070_0023980
551 Ga0501070_0026122
552 Ga0501070_0061334
553 Ga0501070_0064841
554 Ga0501070_0085043
555 Ga0501071_0005001
556 Ga0501071_0022011
557 Ga0501071_0030443
558 Ga0501071_0211241
559 Ga0501072_0027072
560 Ga0501072_0078303
561 Ga0501072_0191071
562 Ga0501073_0041824
563 Ga0501074_0000839
564 Ga0501074_0006707
565 Ga0501074_0007245
566 Ga0501074_0060695
567 Ga0501074_0093527
568 Ga0501076_0083924
569 Ga0501076_0118830
570 Ga0501077_0041270
571 Ga0501079_0077750
572 Ga0501080_0011766
573 Ga0501080_0033037
574 Ga0501080_0152243
575 Ga0501083_0017129
576 Ga0501083_0021831
577 Ga0501035_0010670
578 Ga0501044_0070736
579 Ga0501045_0150220
580 nmdc:mga03n38_16823_c1
581 nmdc:mga03n38_19177_c1
582 nmdc:mga03n38_6940_c1
583 nmdc:mga00v17_38642_c1
584 nmdc:mga00v17_51022_c1
585 nmdc:mga00v17_94827_c1
586 nmdc:mga00v17_96275_c1
587 nmdc:mga0yw44_154880_c1
588 nmdc:mga0yw44_29774_c1
589 nmdc:mga0yw44_3579_c1
590 nmdc:mga04h51_11197_c1
591 nmdc:mga04h51_20591_c1
592 nmdc:mga07m45_49046_c1
593 nmdc:mga07m45_69127_c1
594 nmdc:mga08y16_193232_c1
595 Ga0495601_0023047
596 Ga0495595_0035876
597 Ga0500644_0000502
598 Ga0500593_000305
599 Ga0500620_011602
600 Ga0501084_0012896
601 Ga0501084_0049103
602 Ga0501082_0061038
603 Ga0501082_0084037
604 2643825750
605 2643888833
606 2643957888
607 2644034396
608 2644089347
609 2644098557
610 2644114584
611 2644229342
612 2644319192
613 2644531742
614 2738869828
615 2812332529
616 2855386962
617 2857484817
618 2984580272
619 2990259122
620 8054612864

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13091

PLDc_2

PLD-like domain

288

416

0.96

PF00614

PLDc

Phospholipase D Active site motif

193

219

0.92

PF13091

PLDc_2

PLD-like domain

109

246

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
1byr-assembly1.cif.gz_A crystal structure of a phospholipase d family member, nuc from salmonella typhimurium 0.8656 244 398
1byr-assembly1.cif.gz_A crystal structure of a phospholipase d family member, nuc from salmonella typhimurium 0.8446 244 398
4ggj-assembly1.cif.gz_A crystal structure of zucchini from mouse (mzuc / pld6 / mitopld) 0.8421 259 387
4gel-assembly1.cif.gz_A crystal structure of zucchini 0.8385 259 396
4gel-assembly1.cif.gz_B crystal structure of zucchini 0.8153 259 396
ID Description Score Start End Superfamily
af_P0A6H8_316_458_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9921 258 394 3.30.870.10
af_P0AA84_201_339_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9794 258 384 3.30.870.10
af_Q2FWG8_323_468_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9758 258 396 3.30.870.10
af_Q4CVT1_429_588_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9629 244 391 3.30.870.10
af_Q2FYW4_304_492_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9489 244 420 3.30.870.10
ID Description Score Start End GO Terms
AF-A0A536ZIM8-F1-model_v4 Cardiolipin synthase 0.9808 273 355 GO:0030572
GO:0032049
AF-A0A080K991-F1-model_v4 deleted 0.9669 258 347
AF-A0A6G8PW01-F1-model_v4 PLD phosphodiesterase domain-containing protein 0.9664 165 422 GO:0030572
GO:0032049
AF-A0A7H4MX60-F1-model_v4 Cardiolipin synthetase (EC 2.7.8.-) 0.9601 258 348 GO:0008808
GO:0016020
GO:0032049
AF-A0A536ZIM8-F1-model_v4 Cardiolipin synthase 0.9582 273 355 GO:0030572
GO:0032049

Map