F400796

General Info

Members Datasets Scaffolds Average Seq Length
310 158 620 234

Family's Representative Sequence

Representative Sequence 3300031824|Ga0307413_10382470|Ga0307413_103824702
Length 263
Sequence VSLFGDTWRYLSDPANWRGQGGMAELLVQQLLLSVTALALAVLIGLPVALWLGHLGRGGFLAINISNVGRAVPTFALLALLVTADFPGTEELGPYGRAGLATLMALTLFALPPIITNGYVAIREVSADVKQAAVGMGMTRAQRFFRVELPLGLPLVMSGVRLALVQVWATATIAALVAGPGLGRVITDGFFRSDYAKGIAGAVVVAIVALALELLSAGLQRGVDPTRRGTKRRADAPARERIGHDEGQAGSGHARPDPAGHRR

Samples

Sample ID Description Type Environment
1 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
28 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
29 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
30 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
42 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
67 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
68 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
71 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
72 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
73 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
74 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
75 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
76 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
77 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
78 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
79 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
83 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
84 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
85 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
86 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
87 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
88 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
91 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
92 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
93 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
94 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
95 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
96 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
97 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
98 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
99 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
100 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
101 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
102 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
103 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
106 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
107 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
118 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
119 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
120 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
121 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
122 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
123 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
124 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
125 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
126 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
127 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
130 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
131 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
132 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
133 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
134 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
135 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
136 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
139 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
140 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
141 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
142 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
143 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
144 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
145 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
146 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
147 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
150 2643221561 Nocardioides sp. Root151 Isolate Unclassified
151 2643221615 Nocardioides sp. Root224 Isolate Unclassified
152 2643221641 Nocardioides sp. Root122 Isolate Unclassified
153 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
154 2643221696 Nocardioides sp. Root140 Isolate Unclassified
155 2739367898 Nocardioides sp. CF479 Isolate Unclassified
156 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
157 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
158 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.45
Metatranscriptomes 0.65
Isolates 2.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.29
Nodule 0.32
Rhizoplane 1.61
Rhizosphere 73.87
Stem 0
Stem Tuber 0
Unclassified 2.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307413_10382470 3300031824 Bacteria 1097
2 LJQas_1003797 3300000549 Bacteria 1999
3 JGI25407J50210_10006593 3300003373 Bacteria 2895
4 JGI25405J52794_10006544 3300003911 Bacteria 2130
5 Ga0070658_10002021 3300005327 Bacteria 17019
6 Ga0070658_10007025 3300005327 Bacteria 9089
7 Ga0070658_10031798 3300005327 Bacteria 4239
8 Ga0070658_10046045 3300005327 Bacteria 3530
9 Ga0070658_10285220 3300005327 Bacteria 1406
10 Ga0070658_10331790 3300005327 Bacteria 1300
11 Ga0070683_100036154 3300005329 Bacteria 4518
12 Ga0070683_100066704 3300005329 Bacteria 3352
13 Ga0070680_100000063 3300005336 Bacteria 55957
14 Ga0070680_100309424 3300005336 Bacteria 1340
15 Ga0070680_100627165 3300005336 Unclassified 923
16 Ga0070682_100467526 3300005337 Bacteria 970
17 Ga0070660_100017755 3300005339 Bacteria 5189
18 Ga0070660_100018972 3300005339 Bacteria 5035
19 Ga0070661_100047245 3300005344 Bacteria 3150
20 Ga0070659_100150306 3300005366 Bacteria 1900
21 Ga0070667_100042880 3300005367 Bacteria 3796
22 Ga0070714_100075404 3300005435 Bacteria 2926
23 Ga0070700_100387733 3300005441 Bacteria 1047
24 Ga0070681_10000060 3300005458 Bacteria 78566
25 Ga0070681_10053500 3300005458 Bacteria 4024
26 Ga0070681_10377546 3300005458 Bacteria 1328
27 Ga0070698_100000205 3300005471 Bacteria 56962
28 Ga0070679_100000048 3300005530 Bacteria 89533
29 Ga0070679_100067163 3300005530 Bacteria 3575
30 Ga0070679_100351224 3300005530 Bacteria 1422
31 Ga0070679_100385865 3300005530 Bacteria 1347
32 Ga0070684_100004674 3300005535 Bacteria 10458
33 Ga0070684_100135379 3300005535 Bacteria 2225
34 Ga0070665_100300573 3300005548 Bacteria 1608
35 Ga0068855_100012334 3300005563 Bacteria 10323
36 Ga0068855_100028525 3300005563 Bacteria 6676
37 Ga0068855_100041004 3300005563 Bacteria 5489
38 Ga0068856_100652065 3300005614 Bacteria 1073
39 Ga0068856_100857804 3300005614 Bacteria 927
40 Ga0068852_100089316 3300005616 Bacteria 2754
41 Ga0068852_100092485 3300005616 Bacteria 2709
42 Ga0068852_100243373 3300005616 Bacteria 1720
43 Ga0068852_100327888 3300005616 Bacteria 1489
44 Ga0068861_100039291 3300005719 Bacteria 3530
45 Ga0068870_10127704 3300005840 Bacteria 1473
46 Ga0068860_100000365 3300005843 Bacteria 59835
47 Ga0081455_10000809 3300005937 Bacteria 40300
48 Ga0081538_10001208 3300005981 Bacteria 27108
49 Ga0075365_10006610 3300006038 Bacteria 6399
50 Ga0075365_10011909 3300006038 Bacteria 5137
51 Ga0075365_10024371 3300006038 Bacteria 3816
52 Ga0075365_10053045 3300006038 Bacteria 2684
53 Ga0075365_10100819 3300006038 Bacteria 1977
54 Ga0075365_10104390 3300006038 Bacteria 1943
55 Ga0075365_10136040 3300006038 Bacteria 1703
56 Ga0075365_10199097 3300006038 Bacteria 1403
57 Ga0075365_10242121 3300006038 Bacteria 1267
58 Ga0075365_10284658 3300006038 Bacteria 1163
59 Ga0075365_10296075 3300006038 Bacteria 1138
60 Ga0075365_10309331 3300006038 Bacteria 1112
61 Ga0075365_10362735 3300006038 Bacteria 1021
62 Ga0075368_10003020 3300006042 Bacteria 5564
63 Ga0075368_10027830 3300006042 Bacteria 2182
64 Ga0075363_100002850 3300006048 Bacteria 7198
65 Ga0075363_100009887 3300006048 Bacteria 4503
66 Ga0075363_100066606 3300006048 Bacteria 1949
67 Ga0075363_100066796 3300006048 Bacteria 1947
68 Ga0075363_100093792 3300006048 Bacteria 1655
69 Ga0075363_100208244 3300006048 Bacteria 1119
70 Ga0075364_10043490 3300006051 Bacteria 2921
71 Ga0075364_10050643 3300006051 Bacteria 2711
72 Ga0075364_10062431 3300006051 Bacteria 2445
73 Ga0075364_10071902 3300006051 Bacteria 2279
74 Ga0075364_10088239 3300006051 Bacteria 2056
75 Ga0075364_10285976 3300006051 Bacteria 1122
76 Ga0075367_10011606 3300006178 Bacteria 4670
77 Ga0075367_10016740 3300006178 Bacteria 4008
78 Ga0075367_10048157 3300006178 Bacteria 2510
79 Ga0075367_10055816 3300006178 Bacteria 2345
80 Ga0075367_10307560 3300006178 Bacteria 998
81 Ga0075370_10001806 3300006353 Bacteria 9579
82 Ga0075370_10025060 3300006353 Bacteria 3297
83 Ga0075428_100017994 3300006844 Bacteria 7808
84 Ga0075431_100001660 3300006847 Bacteria 20853
85 Ga0075431_100010850 3300006847 Bacteria 9164
86 Ga0075429_100000930 3300006880 Bacteria 23184
87 Ga0105240_10006789 3300009093 Bacteria 16741
88 Ga0105240_10018611 3300009093 Bacteria 9314
89 Ga0105240_10099101 3300009093 Bacteria 3548
90 Ga0111539_10013315 3300009094 Bacteria 10278
91 Ga0114129_10053066 3300009147 Bacteria 5687
92 Ga0105243_10070366 3300009148 Bacteria 2825
93 Ga0105243_10342470 3300009148 Bacteria 1370
94 Ga0157371_10150348 3300013102 Bacteria 1660
95 Ga0157370_10012506 3300013104 Bacteria 8797
96 Ga0157370_10018195 3300013104 Bacteria 7071
97 Ga0157370_10106342 3300013104 Bacteria 2626
98 Ga0157369_10001076 3300013105 Bacteria 34201
99 Ga0157369_10002228 3300013105 Bacteria 23342
100 Ga0157369_10171750 3300013105 Bacteria 2284
101 Ga0157372_10003070 3300013307 Bacteria 17983
102 Ga0157372_11177298 3300013307 Bacteria 886
103 Ga0157372_11203475 3300013307 Bacteria 875
104 Ga0157375_11362182 3300013308 Bacteria 835
105 Ga0163163_10158433 3300014325 Bacteria 2309
106 Ga0163161_10253452 3300017792 Bacteria 1372
107 Ga0206356_10559821 3300020070 Bacteria 4031
108 Ga0206354_10097715 3300020081 Bacteria 1996
109 Ga0207705_10005912 3300025909 Bacteria 9099
110 Ga0207705_10032844 3300025909 Bacteria 3708
111 Ga0207705_10283345 3300025909 Bacteria 1269
112 Ga0207707_10000371 3300025912 Bacteria 47055
113 Ga0207707_10065321 3300025912 Bacteria 3170
114 Ga0207707_10221442 3300025912 Unclassified 1647
115 Ga0207707_10600259 3300025912 Bacteria 932
116 Ga0207695_10047817 3300025913 Bacteria 4523
117 Ga0207695_10063546 3300025913 Bacteria 3805
118 Ga0207660_10000151 3300025917 Bacteria 42688
119 Ga0207660_10248017 3300025917 Unclassified 1405
120 Ga0207657_10024601 3300025919 Bacteria 5570
121 Ga0207657_10050954 3300025919 Bacteria 3600
122 Ga0207652_10000285 3300025921 Bacteria 52786
123 Ga0207652_10049159 3300025921 Bacteria 3609
124 Ga0207652_10341830 3300025921 Bacteria 1351
125 Ga0207664_10317827 3300025929 Bacteria 1373
126 Ga0207690_10287347 3300025932 Bacteria 1283
127 Ga0207690_10305896 3300025932 Unclassified 1245
128 Ga0207704_10220290 3300025938 Bacteria 1404
129 Ga0207667_10024590 3300025949 Bacteria 6609
130 Ga0207667_10125539 3300025949 Bacteria 2643
131 Ga0207658_10097793 3300025986 Bacteria 2292
132 Ga0207708_10197058 3300026075 Bacteria 1605
133 Ga0207702_10567029 3300026078 Bacteria 1112
134 Ga0207702_10653621 3300026078 Bacteria 1034
135 Ga0207676_10525766 3300026095 Bacteria 1127
136 Ga0207675_100017146 3300026118 Bacteria 6763
137 Ga0207698_10072067 3300026142 Bacteria 2745
138 Ga0207698_10095042 3300026142 Bacteria 2452
139 Ga0207698_10133458 3300026142 Bacteria 2126
140 Ga0209813_10003617 3300027866 Bacteria 3632
141 Ga0209813_10003766 3300027866 Bacteria 3577
142 Ga0207428_10004037 3300027907 Bacteria 14072
143 Ga0268266_10125517 3300028379 Bacteria 2290
144 Ga0268264_10000249 3300028381 Bacteria 101309
145 Ga0265337_1090470 3300028556 Unclassified 835
146 Ga0265334_10012918 3300028573 Bacteria 3502
147 Ga0265338_10012794 3300028800 Bacteria 9543
148 Ga0265327_10074950 3300031251 Bacteria 1684
149 Ga0307408_100207584 3300031548 Bacteria 1590
150 Ga0307408_100444613 3300031548 Bacteria 1123
151 Ga0307408_100858057 3300031548 Bacteria 828
152 Ga0265313_10008783 3300031595 Bacteria 6664
153 Ga0307405_10058794 3300031731 Bacteria 2421
154 Ga0307413_10233846 3300031824 Bacteria 1352
155 Ga0307410_10110637 3300031852 Bacteria 1987
156 Ga0307410_10402084 3300031852 Bacteria 1107
157 Ga0307407_10115754 3300031903 Bacteria 1691
158 Ga0307407_10233709 3300031903 Bacteria 1250
159 Ga0307407_10386558 3300031903 Bacteria 1000
160 Ga0307412_10068206 3300031911 Bacteria 2418
161 Ga0307409_100001670 3300031995 Bacteria 11156
162 Ga0307409_100040094 3300031995 Bacteria 3483
163 Ga0307409_100076743 3300031995 Bacteria 2681
164 Ga0307409_100103937 3300031995 Bacteria 2364
165 Ga0307409_100185988 3300031995 Bacteria 1844
166 Ga0307409_100378510 3300031995 Bacteria 1345
167 Ga0307409_100434802 3300031995 Bacteria 1262
168 Ga0307416_100000233 3300032002 Bacteria 29604
169 Ga0307416_100009435 3300032002 Bacteria 6387
170 Ga0307416_100151553 3300032002 Bacteria 2127
171 Ga0307416_100168821 3300032002 Bacteria 2034
172 Ga0307414_10703210 3300032004 Bacteria 915
173 Ga0307411_10512844 3300032005 Bacteria 1016
174 Ga0307411_10634274 3300032005 Bacteria 923
175 Ga0307415_100000040 3300032126 Bacteria 56119
176 Ga0307415_100242096 3300032126 Bacteria 1460
177 Ga0307415_100275646 3300032126 Bacteria 1380
178 Ga0307415_100319071 3300032126 Bacteria 1295
179 Ga0395899_0077598 3300037312 Bacteria 2422
180 Ga0395899_0103859 3300037312 Bacteria 2049
181 Ga0395900_0089723 3300037418 Bacteria 3159
182 Ga0395900_0121798 3300037418 Bacteria 2676
183 Ga0395898_0081917 3300037466 Unclassified 3111
184 Ga0395905_0137462 3300037471 Bacteria 2299
185 Ga0395905_0315731 3300037471 Bacteria 1452
186 Ga0395901_0097421 3300038443 Bacteria 3083
187 Ga0395901_0216475 3300038443 Unclassified 2003
188 Ga0451793_0413910 3300041452 Bacteria 1034
189 Ga0451795_1640433 3300041456 Bacteria 1206
190 Ga0451853_0491397 3300041512 Bacteria 2454
191 Ga0466965_0057846 3300044683 Bacteria 1933
192 Ga0466965_0061712 3300044683 Bacteria 1874
193 Ga0466966_0025513 3300044684 Bacteria 3859
194 Ga0466961_0001555 3300044693 Bacteria 14203
195 Ga0466961_0172564 3300044693 Bacteria 1345
196 Ga0466968_0020827 3300044735 Bacteria 2651
197 Ga0466970_0049153 3300044765 Bacteria 2249
198 Ga0466959_0004784 3300045049 Bacteria 9133
199 Ga0466967_0147604 3300045976 Bacteria 2195
200 Ga0466967_0384600 3300045976 Bacteria 1363
201 Ga0466967_0985008 3300045976 Bacteria 839
202 Ga0495664_0039559 3300046477 Bacteria 2787
203 Ga0495658_0055002 3300046683 Bacteria 2266
204 Ga0495674_0518616 3300047319 Bacteria 952
205 Ga0496102_0442627 3300048905 Bacteria 1219
206 Ga0496109_0718465 3300048912 Bacteria 937
207 Ga0496110_0470697 3300048913 Bacteria 1145
208 Ga0496124_0211970 3300048927 Bacteria 1465
209 Ga0501031_0037454 3300049568 Bacteria 3164
210 Ga0501031_0049843 3300049568 Bacteria 2729
211 Ga0501031_0072224 3300049568 Bacteria 2247
212 Ga0501032_0046033 3300049569 Bacteria 2949
213 Ga0501032_0116006 3300049569 Bacteria 1771
214 Ga0501036_0026354 3300049572 Bacteria 4906
215 Ga0501036_0126773 3300049572 Bacteria 2156
216 Ga0501037_0075387 3300049573 Bacteria 2450
217 Ga0501037_0339209 3300049573 Bacteria 1038
218 Ga0501039_0002506 3300049575 Bacteria 13682
219 Ga0501039_0069387 3300049575 Bacteria 2737
220 Ga0501040_0147866 3300049576 Bacteria 1657
221 Ga0501040_0167063 3300049576 Bacteria 1557
222 Ga0501040_0257256 3300049576 Bacteria 1246
223 Ga0501040_0367217 3300049576 Bacteria 1032
224 Ga0501040_0387955 3300049576 Bacteria 1002
225 Ga0501041_0037714 3300049577 Bacteria 2929
226 Ga0501041_0127464 3300049577 Bacteria 1585
227 Ga0501042_0120376 3300049578 Bacteria 1890
228 Ga0501042_0223903 3300049578 Bacteria 1357
229 Ga0501046_0122256 3300049580 Bacteria 1980
230 Ga0501046_0345041 3300049580 Bacteria 1082
231 Ga0501048_0025036 3300049582 Bacteria 4352
232 Ga0501067_0146608 3300049583 Bacteria 1315
233 Ga0501067_0212833 3300049583 Bacteria 1076
234 Ga0501068_0037220 3300049584 Bacteria 2913
235 Ga0501069_0026201 3300049585 Bacteria 3193
236 Ga0501069_0039694 3300049585 Bacteria 2600
237 Ga0501069_0047417 3300049585 Bacteria 2385
238 Ga0501070_0006988 3300049586 Bacteria 9603
239 Ga0501070_0017490 3300049586 Bacteria 6019
240 Ga0501070_0182505 3300049586 Bacteria 1727
241 Ga0501070_0262424 3300049586 Bacteria 1412
242 Ga0501071_0031847 3300049587 Bacteria 3741
243 Ga0501071_0145904 3300049587 Bacteria 1764
244 Ga0501071_0192522 3300049587 Bacteria 1530
245 Ga0501071_0529965 3300049587 Bacteria 904
246 Ga0501072_0126013 3300049588 Bacteria 2041
247 Ga0501073_0463054 3300049589 Bacteria 876
248 Ga0501075_0055159 3300049591 Bacteria 2990
249 Ga0501076_0080925 3300049592 Bacteria 2607
250 Ga0501076_0173597 3300049592 Bacteria 1757
251 Ga0501209_099080 3300049656 Bacteria 854
252 Ga0501079_0101754 3300049741 Bacteria 2228
253 Ga0501080_0194815 3300049742 Bacteria 1862
254 Ga0501080_0538242 3300049742 Bacteria 1041
255 Ga0501081_0187305 3300049743 Bacteria 1498
256 Ga0501045_0051126 3300049824 Bacteria 3016
257 Ga0501045_0093419 3300049824 Bacteria 2225
258 Ga0501045_0100381 3300049824 Bacteria 2142
259 Ga0501045_0193701 3300049824 Bacteria 1515
260 Ga0501045_0572844 3300049824 Bacteria 837
261 nmdc:mga03n38_11472_c1 3300050490 Bacteria 3303
262 nmdc:mga03n38_13006_c1 3300050490 Bacteria 3149
263 nmdc:mga03n38_5770_c1 3300050490 Bacteria 4248
264 nmdc:mga00v17_103864_c1 3300050491 Bacteria 1796
265 nmdc:mga00v17_126054_c1 3300050491 Bacteria 1634
266 nmdc:mga00v17_2262_c1 3300050491 Bacteria 9865
267 nmdc:mga0yw44_118476_c1 3300050492 Bacteria 1703
268 nmdc:mga0yw44_166876_c1 3300050492 Bacteria 1444
269 nmdc:mga0yw44_237791_c1 3300050492 Bacteria 1210
270 nmdc:mga0yw44_321766_c1 3300050492 Bacteria 1039
271 nmdc:mga0yw44_36228_c1 3300050492 Bacteria 2906
272 nmdc:mga0yw44_379497_c1 3300050492 Bacteria 954
273 nmdc:mga0yw44_38796_c1 3300050492 Bacteria 2821
274 nmdc:mga0yw44_417358_c1 3300050492 Bacteria 908
275 nmdc:mga0yw44_4694_c1 3300050492 Bacteria 6317
276 nmdc:mga0yw44_60619_c1 3300050492 Bacteria 2318
277 nmdc:mga0yw44_72013_c1 3300050492 Bacteria 2147
278 nmdc:mga0yw44_72595_c1 3300050492 Bacteria 2139
279 nmdc:mga0yw44_86936_c1 3300050492 Bacteria 1970
280 nmdc:mga06z11_101458_c1 3300050494 Bacteria 1580
281 nmdc:mga04h51_1930_c1 3300050495 Bacteria 4846
282 nmdc:mga04h51_8205_c1 3300050495 Bacteria 2788
283 nmdc:mga07m45_13135_c1 3300050496 Bacteria 4386
284 nmdc:mga07m45_310483_c1 3300050496 Bacteria 917
285 nmdc:mga07m45_356190_c1 3300050496 Bacteria 850
286 nmdc:mga05p37_974_c1 3300050507 Bacteria 32510
287 nmdc:mga09592_115_c1 3300050508 Bacteria 50649
288 nmdc:mga09592_463376_c1 3300050508 Bacteria 1093
289 nmdc:mga0qj67_51040_c1 3300050509 Bacteria 3270
290 nmdc:mga06r32_449_c1 3300050510 Bacteria 34962
291 nmdc:mga06r32_62707_c1 3300050510 Bacteria 3582
292 nmdc:mga08y16_146969_c1 3300050511 Bacteria 2451
293 nmdc:mga0a205_14372_c1 3300050515 Bacteria 7384
294 Ga0500644_0000100 3300053088 Bacteria 54794
295 Ga0500554_020454 3300053102 Bacteria 1820
296 Ga0500556_0000793 3300053104 Bacteria 18533
297 Ga0500593_003693 3300053117 Bacteria 5832
298 Ga0500573_0007959 3300053140 Bacteria 5818
299 Ga0501084_0526202 3300054114 Bacteria 1000
300 Ga0501082_0035523 3300060353 Bacteria 4296
301 Ga0501082_0131233 3300060353 Bacteria 2174
302 2643824766 2643221561 Bacteria 4984412
303 2644093185 2643221615 Bacteria 5487866
304 2644229611 2643221641 Bacteria 4490190
305 2644322796 2643221657 Bacteria 5490246
306 2644536017 2643221696 Bacteria 5431823
307 2740168361 2739367898 Bacteria 4367674
308 2837274938 2837268691 Bacteria 7850704
309 2855388052 2855386786 Bacteria 4752232
310 8054614244 8054609563 Bacteria 5170090
311 Ga0307413_10382470
312 LJQas_1003797
313 JGI25407J50210_10006593
314 JGI25405J52794_10006544
315 Ga0070658_10002021
316 Ga0070658_10007025
317 Ga0070658_10031798
318 Ga0070658_10046045
319 Ga0070658_10285220
320 Ga0070658_10331790
321 Ga0070683_100036154
322 Ga0070683_100066704
323 Ga0070680_100000063
324 Ga0070680_100309424
325 Ga0070680_100627165
326 Ga0070682_100467526
327 Ga0070660_100017755
328 Ga0070660_100018972
329 Ga0070661_100047245
330 Ga0070659_100150306
331 Ga0070667_100042880
332 Ga0070714_100075404
333 Ga0070700_100387733
334 Ga0070681_10000060
335 Ga0070681_10053500
336 Ga0070681_10377546
337 Ga0070698_100000205
338 Ga0070679_100000048
339 Ga0070679_100067163
340 Ga0070679_100351224
341 Ga0070679_100385865
342 Ga0070684_100004674
343 Ga0070684_100135379
344 Ga0070665_100300573
345 Ga0068855_100012334
346 Ga0068855_100028525
347 Ga0068855_100041004
348 Ga0068856_100652065
349 Ga0068856_100857804
350 Ga0068852_100089316
351 Ga0068852_100092485
352 Ga0068852_100243373
353 Ga0068852_100327888
354 Ga0068861_100039291
355 Ga0068870_10127704
356 Ga0068860_100000365
357 Ga0081455_10000809
358 Ga0081538_10001208
359 Ga0075365_10006610
360 Ga0075365_10011909
361 Ga0075365_10024371
362 Ga0075365_10053045
363 Ga0075365_10100819
364 Ga0075365_10104390
365 Ga0075365_10136040
366 Ga0075365_10199097
367 Ga0075365_10242121
368 Ga0075365_10284658
369 Ga0075365_10296075
370 Ga0075365_10309331
371 Ga0075365_10362735
372 Ga0075368_10003020
373 Ga0075368_10027830
374 Ga0075363_100002850
375 Ga0075363_100009887
376 Ga0075363_100066606
377 Ga0075363_100066796
378 Ga0075363_100093792
379 Ga0075363_100208244
380 Ga0075364_10043490
381 Ga0075364_10050643
382 Ga0075364_10062431
383 Ga0075364_10071902
384 Ga0075364_10088239
385 Ga0075364_10285976
386 Ga0075367_10011606
387 Ga0075367_10016740
388 Ga0075367_10048157
389 Ga0075367_10055816
390 Ga0075367_10307560
391 Ga0075370_10001806
392 Ga0075370_10025060
393 Ga0075428_100017994
394 Ga0075431_100001660
395 Ga0075431_100010850
396 Ga0075429_100000930
397 Ga0105240_10006789
398 Ga0105240_10018611
399 Ga0105240_10099101
400 Ga0111539_10013315
401 Ga0114129_10053066
402 Ga0105243_10070366
403 Ga0105243_10342470
404 Ga0157371_10150348
405 Ga0157370_10012506
406 Ga0157370_10018195
407 Ga0157370_10106342
408 Ga0157369_10001076
409 Ga0157369_10002228
410 Ga0157369_10171750
411 Ga0157372_10003070
412 Ga0157372_11177298
413 Ga0157372_11203475
414 Ga0157375_11362182
415 Ga0163163_10158433
416 Ga0163161_10253452
417 Ga0206356_10559821
418 Ga0206354_10097715
419 Ga0207705_10005912
420 Ga0207705_10032844
421 Ga0207705_10283345
422 Ga0207707_10000371
423 Ga0207707_10065321
424 Ga0207707_10221442
425 Ga0207707_10600259
426 Ga0207695_10047817
427 Ga0207695_10063546
428 Ga0207660_10000151
429 Ga0207660_10248017
430 Ga0207657_10024601
431 Ga0207657_10050954
432 Ga0207652_10000285
433 Ga0207652_10049159
434 Ga0207652_10341830
435 Ga0207664_10317827
436 Ga0207690_10287347
437 Ga0207690_10305896
438 Ga0207704_10220290
439 Ga0207667_10024590
440 Ga0207667_10125539
441 Ga0207658_10097793
442 Ga0207708_10197058
443 Ga0207702_10567029
444 Ga0207702_10653621
445 Ga0207676_10525766
446 Ga0207675_100017146
447 Ga0207698_10072067
448 Ga0207698_10095042
449 Ga0207698_10133458
450 Ga0209813_10003617
451 Ga0209813_10003766
452 Ga0207428_10004037
453 Ga0268266_10125517
454 Ga0268264_10000249
455 Ga0265337_1090470
456 Ga0265334_10012918
457 Ga0265338_10012794
458 Ga0265327_10074950
459 Ga0307408_100207584
460 Ga0307408_100444613
461 Ga0307408_100858057
462 Ga0265313_10008783
463 Ga0307405_10058794
464 Ga0307413_10233846
465 Ga0307410_10110637
466 Ga0307410_10402084
467 Ga0307407_10115754
468 Ga0307407_10233709
469 Ga0307407_10386558
470 Ga0307412_10068206
471 Ga0307409_100001670
472 Ga0307409_100040094
473 Ga0307409_100076743
474 Ga0307409_100103937
475 Ga0307409_100185988
476 Ga0307409_100378510
477 Ga0307409_100434802
478 Ga0307416_100000233
479 Ga0307416_100009435
480 Ga0307416_100151553
481 Ga0307416_100168821
482 Ga0307414_10703210
483 Ga0307411_10512844
484 Ga0307411_10634274
485 Ga0307415_100000040
486 Ga0307415_100242096
487 Ga0307415_100275646
488 Ga0307415_100319071
489 Ga0395899_0077598
490 Ga0395899_0103859
491 Ga0395900_0089723
492 Ga0395900_0121798
493 Ga0395898_0081917
494 Ga0395905_0137462
495 Ga0395905_0315731
496 Ga0395901_0097421
497 Ga0395901_0216475
498 Ga0451793_0413910
499 Ga0451795_1640433
500 Ga0451853_0491397
501 Ga0466965_0057846
502 Ga0466965_0061712
503 Ga0466966_0025513
504 Ga0466961_0001555
505 Ga0466961_0172564
506 Ga0466968_0020827
507 Ga0466970_0049153
508 Ga0466959_0004784
509 Ga0466967_0147604
510 Ga0466967_0384600
511 Ga0466967_0985008
512 Ga0495664_0039559
513 Ga0495658_0055002
514 Ga0495674_0518616
515 Ga0496102_0442627
516 Ga0496109_0718465
517 Ga0496110_0470697
518 Ga0496124_0211970
519 Ga0501031_0037454
520 Ga0501031_0049843
521 Ga0501031_0072224
522 Ga0501032_0046033
523 Ga0501032_0116006
524 Ga0501036_0026354
525 Ga0501036_0126773
526 Ga0501037_0075387
527 Ga0501037_0339209
528 Ga0501039_0002506
529 Ga0501039_0069387
530 Ga0501040_0147866
531 Ga0501040_0167063
532 Ga0501040_0257256
533 Ga0501040_0367217
534 Ga0501040_0387955
535 Ga0501041_0037714
536 Ga0501041_0127464
537 Ga0501042_0120376
538 Ga0501042_0223903
539 Ga0501046_0122256
540 Ga0501046_0345041
541 Ga0501048_0025036
542 Ga0501067_0146608
543 Ga0501067_0212833
544 Ga0501068_0037220
545 Ga0501069_0026201
546 Ga0501069_0039694
547 Ga0501069_0047417
548 Ga0501070_0006988
549 Ga0501070_0017490
550 Ga0501070_0182505
551 Ga0501070_0262424
552 Ga0501071_0031847
553 Ga0501071_0145904
554 Ga0501071_0192522
555 Ga0501071_0529965
556 Ga0501072_0126013
557 Ga0501073_0463054
558 Ga0501075_0055159
559 Ga0501076_0080925
560 Ga0501076_0173597
561 Ga0501209_099080
562 Ga0501079_0101754
563 Ga0501080_0194815
564 Ga0501080_0538242
565 Ga0501081_0187305
566 Ga0501045_0051126
567 Ga0501045_0093419
568 Ga0501045_0100381
569 Ga0501045_0193701
570 Ga0501045_0572844
571 nmdc:mga03n38_11472_c1
572 nmdc:mga03n38_13006_c1
573 nmdc:mga03n38_5770_c1
574 nmdc:mga00v17_103864_c1
575 nmdc:mga00v17_126054_c1
576 nmdc:mga00v17_2262_c1
577 nmdc:mga0yw44_118476_c1
578 nmdc:mga0yw44_166876_c1
579 nmdc:mga0yw44_237791_c1
580 nmdc:mga0yw44_321766_c1
581 nmdc:mga0yw44_36228_c1
582 nmdc:mga0yw44_379497_c1
583 nmdc:mga0yw44_38796_c1
584 nmdc:mga0yw44_417358_c1
585 nmdc:mga0yw44_4694_c1
586 nmdc:mga0yw44_60619_c1
587 nmdc:mga0yw44_72013_c1
588 nmdc:mga0yw44_72595_c1
589 nmdc:mga0yw44_86936_c1
590 nmdc:mga06z11_101458_c1
591 nmdc:mga04h51_1930_c1
592 nmdc:mga04h51_8205_c1
593 nmdc:mga07m45_13135_c1
594 nmdc:mga07m45_310483_c1
595 nmdc:mga07m45_356190_c1
596 nmdc:mga05p37_974_c1
597 nmdc:mga09592_115_c1
598 nmdc:mga09592_463376_c1
599 nmdc:mga0qj67_51040_c1
600 nmdc:mga06r32_449_c1
601 nmdc:mga06r32_62707_c1
602 nmdc:mga08y16_146969_c1
603 nmdc:mga0a205_14372_c1
604 Ga0500644_0000100
605 Ga0500554_020454
606 Ga0500556_0000793
607 Ga0500593_003693
608 Ga0500573_0007959
609 Ga0501084_0526202
610 Ga0501082_0035523
611 Ga0501082_0131233
612 2643824766
613 2644093185
614 2644229611
615 2644322796
616 2644536017
617 2740168361
618 2837274938
619 2855388052
620 8054614244

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

29

229

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ahc-assembly1.cif.gz_B opua apo inward-facing 0.8888 29 220
3tui-assembly2.cif.gz_E inward facing conformations of the metni methionine abc transporter: cy5 native crystal form 0.8331 23 223
3tuz-assembly2.cif.gz_F inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form 0.8306 29 223
3dhw-assembly1.cif.gz_A crystal structure of methionine importer metni 0.8141 29 215
3dhw-assembly2.cif.gz_F crystal structure of methionine importer metni 0.8054 29 216
ID Description Score Start End Superfamily
af_O69722_23_210_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9499 27 219 1.10.3720.10
af_Q47539_71_268_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9216 27 223 1.10.3720.10
af_P14176_140_330_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9211 22 221 1.10.3720.10
af_O69722_23_210_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9204 27 219 1.10.3720.10
af_Q2FVG9_10_202_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9186 23 221 1.10.3720.10
ID Description Score Start End GO Terms
AF-I0R100-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.9645 4 223 GO:0005886
GO:0031460
GO:0055085
AF-A0A5B1LH64-F1-model_v4 ABC transporter permease 0.9603 1 225 GO:0005886
GO:0031460
GO:0055085
AF-A0A1H8QYR4-F1-model_v4 Osmoprotectant transport system permease protein 0.9587 4 227 GO:0005886
GO:0031460
GO:0055085
AF-A0A3N0GWJ0-F1-model_v4 ABC transporter permease 0.9585 39 229 GO:0005886
GO:0031460
GO:0055085
AF-R1IH42-F1-model_v4 Glycine/betaine ABC transporter permease 0.9554 4 227 GO:0005886
GO:0031460
GO:0055085

Map