F400743

General Info

Members Datasets Scaffolds Average Seq Length
310 210 620 421

Family's Representative Sequence

Representative Sequence 3300023556|Ga0247519_100972|Ga0247519_1009721
Length 496
Sequence MANSAIAGMAASLSIAGFEPSRGAASRSISRFDGLRAAEADLPDVSLLWGVRPNRLPRAGPRTGIRAMLIPSVNALQREKDPKKRVVITGMGLVSVFGNNVDTYYERLLEGQSGIAPIDRFDASKFPTRFGGQIRGFSSEDYIDPKNDRRLDDCIRYCLVSGQKALEDADLGKDKINKIDKERAGVLVGSGMGGLKVFSDGVQALLDKGYRKITPFFIPYAITNMGSALLGIEVGFMGPNYSISTACATSNYCFYSAANHIRRGEADIMLAGGTEAAIIPIGLGGFVACRALSQRNDDPQSASRPWDRDRDGFVMGEGAGVLVMESLEHAKKRGAPILAEYLGGAINCDAYHMTDPRADGLGVSSCIERSLIDAGVSPEEVNYINAHATSTLAGDLAEVNAIKNVFKNTSEIKINATKSMIGHCLGAAGGLEAIATVKAINTGWLHPTINQFNPEPSVEFDTVRNVKKQHEIHVAISNSFGFGGHNSVVVFAPYRP

Samples

Sample ID Description Type Environment
1 3300023556 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003564 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_05_lowP_nobac_d1 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300003565 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_16_lowP_mix3_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
5 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
55 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
56 3300023560 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
57 3300023561 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
58 3300023562 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
59 3300023682 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
60 3300023686 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU4 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
61 3300023689 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU1 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
62 3300023690 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI1 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
63 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
89 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
90 3300031615 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRU2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
91 3300031633 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRU4 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
92 3300031636 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
93 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
94 3300031667 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
95 3300031678 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE6 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
96 3300031690 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRI1 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
97 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
98 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
99 3300031816 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Unclassified
100 3300031828 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Unclassified
101 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
102 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
103 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
104 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
105 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
106 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
107 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
108 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
109 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300036458 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
112 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
113 3300036534 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRU5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
114 3300036535 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRU6 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
115 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
116 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
118 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
119 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
122 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
123 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
124 3300041502 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaT Metatranscriptome Unclassified
125 3300041504 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaT Metatranscriptome Unclassified
126 3300041506 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaT Metatranscriptome Unclassified
127 3300041510 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaT Metatranscriptome Unclassified
128 3300041916 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaT_extra_run Metatranscriptome Unclassified
129 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
130 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
131 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
132 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
133 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
134 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
137 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
138 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
139 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
140 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
141 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
142 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
143 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
144 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
145 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
146 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
147 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
148 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
149 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
150 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
151 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
152 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
153 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
154 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
155 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
156 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
157 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
158 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
159 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
160 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
161 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
162 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
163 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
164 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
165 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
166 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
167 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
168 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
169 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
170 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
171 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
172 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
173 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
174 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
175 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
176 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
177 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
178 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
179 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
180 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
181 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
182 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
183 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
184 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
185 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
186 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
187 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
189 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
190 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
191 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
192 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
193 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
194 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
195 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
196 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
197 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
198 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
199 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
200 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
201 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
202 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
203 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified
204 2858800743 Sinorhizobium meliloti AK170 Isolate Unclassified
205 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
206 2921201388 Sinorhizobium meliloti USDA1692 Isolate Nodule
207 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
208 2937106411 Sinorhizobium meliloti USDA1214 Isolate Nodule
209 2957457609 Sinorhizobium meliloti USDA1751 Isolate Nodule
210 2964643177 Sinorhizobium meliloti USDA1760 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 85.48
Metatranscriptomes 11.94
Isolates 2.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.32
Nodule 1.61
Rhizoplane 5.81
Rhizosphere 76.45
Stem 0
Stem Tuber 0
Unclassified 1.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0247519_100972 3300023556 Eukaryota 2471
2 rootH1_10023008 3300003323 Unclassified 1908
3 Ga0006555J51386_1003902 3300003564 Eukaryota 1932
4 Ga0006560J51390_1003102 3300003565 Eukaryota 1879
5 Ga0058860_10001017 3300004801 Eukaryota 1715
6 Ga0065712_10071293 3300005290 Bacteria 5358
7 Ga0070682_100005563 3300005337 Bacteria 7018
8 Ga0070668_100028389 3300005347 Bacteria 4248
9 Ga0070668_100061303 3300005347 Bacteria 2914
10 Ga0070674_100030255 3300005356 Bacteria 3576
11 Ga0070709_10009069 3300005434 Bacteria 5477
12 Ga0070705_100127911 3300005440 Bacteria 1652
13 Ga0070700_100121404 3300005441 Bacteria 1751
14 Ga0070694_100040866 3300005444 Bacteria 3092
15 Ga0070694_100129624 3300005444 Bacteria 1820
16 Ga0070708_100037669 3300005445 Unclassified 4221
17 Ga0070708_100256855 3300005445 Bacteria 1642
18 Ga0070663_100012924 3300005455 Bacteria 5301
19 Ga0070662_100030876 3300005457 Bacteria 3754
20 Ga0068867_100000860 3300005459 Bacteria 20460
21 Ga0070706_100000836 3300005467 Bacteria 34062
22 Ga0070706_100004941 3300005467 Bacteria 12765
23 Ga0070706_100144815 3300005467 Bacteria 2219
24 Ga0070706_100220732 3300005467 Bacteria 1769
25 Ga0070707_100002970 3300005468 Bacteria 16091
26 Ga0070707_100013100 3300005468 Bacteria 7750
27 Ga0070707_100018428 3300005468 Bacteria 6567
28 Ga0070707_100106333 3300005468 Bacteria 2721
29 Ga0070707_100218339 3300005468 Bacteria 1858
30 Ga0070707_100237128 3300005468 Bacteria 1775
31 Ga0070707_100250140 3300005468 Bacteria 1725
32 Ga0070698_100004261 3300005471 Bacteria 15721
33 Ga0070698_100008960 3300005471 Bacteria 10765
34 Ga0070698_100022508 3300005471 Bacteria 6593
35 Ga0070698_100035321 3300005471 Bacteria 5169
36 Ga0070699_100000224 3300005518 Bacteria 56041
37 Ga0070699_100004764 3300005518 Bacteria 11992
38 Ga0070699_100005579 3300005518 Bacteria 11036
39 Ga0070684_100107950 3300005535 Bacteria 2494
40 Ga0070697_100132298 3300005536 Bacteria 2093
41 Ga0070672_100025112 3300005543 Bacteria 4415
42 Ga0070672_100106975 3300005543 Bacteria 2276
43 Ga0070696_100021287 3300005546 Bacteria 4396
44 Ga0070704_100000374 3300005549 Bacteria 20403
45 Ga0068859_100024377 3300005617 Bacteria 6069
46 Ga0068859_100240609 3300005617 Bacteria 1899
47 Ga0068861_100003266 3300005719 Bacteria 10724
48 Ga0068863_100029327 3300005841 Bacteria 5252
49 Ga0068863_100055056 3300005841 Bacteria 3768
50 Ga0068863_100161455 3300005841 Bacteria 2147
51 Ga0068860_100002328 3300005843 Bacteria 19941
52 Ga0068860_100007173 3300005843 Bacteria 11145
53 Ga0068862_100010145 3300005844 Bacteria 7773
54 Ga0068862_100020177 3300005844 Bacteria 5566
55 Ga0081455_10012109 3300005937 Bacteria 8622
56 Ga0081455_10044556 3300005937 Bacteria 3868
57 Ga0081538_10006319 3300005981 Bacteria 10460
58 Ga0075367_10010605 3300006178 Bacteria 4847
59 Ga0075428_100059798 3300006844 Bacteria 4172
60 Ga0075428_100201093 3300006844 Bacteria 2154
61 Ga0075430_100039917 3300006846 Bacteria 3973
62 Ga0075430_100079713 3300006846 Bacteria 2743
63 Ga0075431_100202106 3300006847 Bacteria 2033
64 Ga0075433_10021090 3300006852 Bacteria 5458
65 Ga0075434_100013397 3300006871 Bacteria 7801
66 Ga0075434_100078458 3300006871 Bacteria 3298
67 Ga0075429_100000576 3300006880 Bacteria 28222
68 Ga0075429_100171889 3300006880 Bacteria 1898
69 Ga0075429_100311920 3300006880 Bacteria 1377
70 Ga0068865_100007223 3300006881 Bacteria 6824
71 Ga0075436_100082910 3300006914 Bacteria 2224
72 Ga0097620_100024377 3300006931 Bacteria 6069
73 Ga0097620_100240614 3300006931 Bacteria 1899
74 Ga0099794_10048909 3300007265 Bacteria 2031
75 Ga0105240_10007108 3300009093 Bacteria 16313
76 Ga0105240_10031476 3300009093 Bacteria 6880
77 Ga0105240_10119447 3300009093 Unclassified 3175
78 Ga0114129_10059156 3300009147 Bacteria 5358
79 Ga0114129_10095802 3300009147 Bacteria 4110
80 Ga0114129_10165941 3300009147 Bacteria 3013
81 Ga0105248_10011572 3300009177 Bacteria 9720
82 Ga0105238_10051571 3300009551 Bacteria 4138
83 Ga0105239_10003515 3300010375 Bacteria 19186
84 Ga0105239_10040848 3300010375 Bacteria 5083
85 Ga0157374_10027395 3300013296 Bacteria 5140
86 Ga0157374_10085208 3300013296 Bacteria 3004
87 Ga0157378_10047862 3300013297 Bacteria 3802
88 Ga0157375_10050728 3300013308 Bacteria 4071
89 Ga0157375_10052749 3300013308 Bacteria 3999
90 Ga0157375_10087582 3300013308 Bacteria 3167
91 Ga0163163_10010203 3300014325 Bacteria 8432
92 Ga0163163_10389753 3300014325 Bacteria 1451
93 Ga0157379_10040581 3300014968 Bacteria 4155
94 Ga0206355_1221602 3300020076 Bacteria 1886
95 Ga0247514_102327 3300023560 Eukaryota 2159
96 Ga0247518_101849 3300023561 Eukaryota 2303
97 Ga0247516_101479 3300023562 Eukaryota 2407
98 Ga0247513_102079 3300023682 Eukaryota 1960
99 Ga0247520_101146 3300023686 Eukaryota 2295
100 Ga0247517_101173 3300023689 Eukaryota 2426
101 Ga0247512_102144 3300023690 Eukaryota 2173
102 Ga0207642_10013968 3300025899 Bacteria 2947
103 Ga0207699_10031026 3300025906 Bacteria 2997
104 Ga0207645_10089713 3300025907 Bacteria 1977
105 Ga0207684_10000202 3300025910 Bacteria 91934
106 Ga0207684_10001067 3300025910 Bacteria 30741
107 Ga0207684_10003724 3300025910 Bacteria 14767
108 Ga0207684_10051713 3300025910 Bacteria 3486
109 Ga0207695_10013361 3300025913 Bacteria 9797
110 Ga0207646_10001324 3300025922 Bacteria 30737
111 Ga0207646_10011814 3300025922 Bacteria 8432
112 Ga0207646_10013291 3300025922 Bacteria 7877
113 Ga0207646_10151540 3300025922 Bacteria 2091
114 Ga0207664_10017942 3300025929 Bacteria 5200
115 Ga0207644_10039002 3300025931 Bacteria 3351
116 Ga0207706_10072167 3300025933 Bacteria 3036
117 Ga0207686_10003207 3300025934 Bacteria 8795
118 Ga0207669_10010333 3300025937 Bacteria 4489
119 Ga0207704_10014863 3300025938 Bacteria 3946
120 Ga0207691_10015699 3300025940 Bacteria 7199
121 Ga0207711_10382974 3300025941 Bacteria 1305
122 Ga0207679_10161084 3300025945 Bacteria 1837
123 Ga0207651_10238206 3300025960 Bacteria 1481
124 Ga0207668_10039342 3300025972 Bacteria 3182
125 Ga0207668_10043046 3300025972 Bacteria 3061
126 Ga0207678_10022671 3300026067 Bacteria 5499
127 Ga0207708_10076442 3300026075 Bacteria 2569
128 Ga0207641_10053955 3300026088 Bacteria 3409
129 Ga0207648_10000823 3300026089 Bacteria 35061
130 Ga0207648_10214658 3300026089 Bacteria 1709
131 Ga0207675_100002092 3300026118 Bacteria 19820
132 Ga0207675_100009617 3300026118 Bacteria 9046
133 Ga0268266_10000050 3300028379 Bacteria 302778
134 Ga0268266_10147762 3300028379 Bacteria 2115
135 Ga0268265_10006067 3300028380 Bacteria 8208
136 Ga0268264_10014315 3300028381 Bacteria 6523
137 Ga0268264_10136039 3300028381 Unclassified 2185
138 Ga0265316_10026108 3300031344 Bacteria 4866
139 Ga0307408_100299313 3300031548 Bacteria 1347
140 Ga0310107_102225 3300031615 Eukaryota 2319
141 Ga0310108_101885 3300031633 Eukaryota 2170
142 Ga0310113_102190 3300031636 Eukaryota 2024
143 Ga0316575_10011426 3300031665 Bacteria 3287
144 Ga0310111_101906 3300031667 Eukaryota 2353
145 Ga0310114_102678 3300031678 Eukaryota 1755
146 Ga0310101_102275 3300031690 Eukaryota 2182
147 Ga0316579_10000566 3300031691 Bacteria 12324
148 Ga0316578_10008722 3300031728 Bacteria 5177
149 Ga0316578_10030108 3300031728 Bacteria 3084
150 Ga0316042_102515 3300031816 Eukaryota 2485
151 Ga0316042_103407 3300031816 Eukaryota 2223
152 Ga0316043_102272 3300031828 Eukaryota 2550
153 Ga0307409_100019219 3300031995 Bacteria 4620
154 Ga0307409_100051874 3300031995 Bacteria 3141
155 Ga0307411_10011255 3300032005 Bacteria 4817
156 Ga0307415_100018753 3300032126 Bacteria 4186
157 Ga0316583_10032243 3300032133 Bacteria 1863
158 Ga0316583_10034458 3300032133 Bacteria 1797
159 Ga0316593_10017315 3300032168 Bacteria 2197
160 Ga0316593_10022448 3300032168 Bacteria 1982
161 Ga0316593_10027487 3300032168 Bacteria 1826
162 Ga0316574_0087049 3300035398 Bacteria 1989
163 Ga0373931_0083147 3300035691 Bacteria 1771
164 Ga0373927_0011927 3300035695 Bacteria 5785
165 Ga0373927_0084566 3300035695 Bacteria 2058
166 Ga0373947_0013729 3300035725 Bacteria 4641
167 Ga0373937_0046807 3300036401 Bacteria 3956
168 Ga0373937_0097683 3300036401 Bacteria 2724
169 Ga0310112_002256 3300036458 Eukaryota 2384
170 Ga0372808_002407 3300036459 Eukaryota 2154
171 Ga0310109_002310 3300036534 Eukaryota 2114
172 Ga0310109_002383 3300036534 Eukaryota 2098
173 Ga0310109_004203 3300036534 Eukaryota 1773
174 Ga0310110_004026 3300036535 Eukaryota 2043
175 Ga0310110_005712 3300036535 Eukaryota 1796
176 Ga0316582_0022772 3300036647 Bacteria 3725
177 Ga0316582_0063283 3300036647 Bacteria 2377
178 Ga0373925_0031164 3300037068 Bacteria 3917
179 Ga0373925_0128474 3300037068 Bacteria 1974
180 Ga0395899_0103638 3300037312 Bacteria 2052
181 Ga0395900_0013687 3300037418 Bacteria 8282
182 Ga0395900_0050987 3300037418 Bacteria 4263
183 Ga0395905_0000113 3300037471 Bacteria 134436
184 Ga0395905_0013299 3300037471 Bacteria 7892
185 Ga0395901_0020102 3300038443 Bacteria 6833
186 Ga0400486_21503 3300038742 Bacteria 3151
187 Ga0436365_0848006 3300039437 Bacteria 3201
188 Ga0436365_1574874 3300039437 Bacteria 2594
189 Ga0436365_1661760 3300039437 Bacteria 1290
190 Ga0436363_1383688 3300039450 Bacteria 2687
191 Ga0451846_24129 3300041502 Eukaryota 1992
192 Ga0451848_02719 3300041504 Eukaryota 1537
193 Ga0451850_06174 3300041506 Eukaryota 1784
194 Ga0451854_23538 3300041510 Eukaryota 1752
195 Ga0452271_72547 3300041916 Eukaryota 2021
196 Ga0451577_0012539 3300042876 Bacteria 7959
197 Ga0451577_0084782 3300042876 Bacteria 2827
198 Ga0453683_0000595 3300044673 Bacteria 39965
199 Ga0453683_0019224 3300044673 Bacteria 4376
200 Ga0466965_0040947 3300044683 Bacteria 2281
201 Ga0466963_0025997 3300044694 Bacteria 3740
202 Ga0453684_0000017 3300044712 Bacteria 925696
203 Ga0453684_0000153 3300044712 Bacteria 305116
204 Ga0453684_0004739 3300044712 Bacteria 28104
205 Ga0453684_0008181 3300044712 Bacteria 18863
206 Ga0453684_0203448 3300044712 Bacteria 2306
207 Ga0466957_0000260 3300044842 Bacteria 25409
208 Ga0451576_0000029 3300045051 Bacteria 404449
209 Ga0451576_0000312 3300045051 Bacteria 117649
210 Ga0451576_0003388 3300045051 Bacteria 22016
211 Ga0451576_0048520 3300045051 Bacteria 4459
212 Ga0466958_0017926 3300045836 Bacteria 4102
213 Ga0466967_0111130 3300045976 Bacteria 2518
214 Ga0495592_0056379 3300046454 Bacteria 2904
215 Ga0495605_0000063 3300046474 Bacteria 140789
216 Ga0495664_0077989 3300046477 Bacteria 1984
217 Ga0495584_0000171 3300046491 Bacteria 45582
218 Ga0495606_0007114 3300046507 Bacteria 10116
219 Ga0495608_0012760 3300046511 Bacteria 5830
220 Ga0495628_0009785 3300046516 Bacteria 8169
221 Ga0495630_0061904 3300046517 Bacteria 2811
222 Ga0495630_0143999 3300046517 Bacteria 1812
223 Ga0495632_0000062 3300046519 Bacteria 118205
224 Ga0495652_0095827 3300046529 Bacteria 2417
225 Ga0495586_0022723 3300046535 Bacteria 3347
226 Ga0495597_0000204 3300046542 Bacteria 54418
227 Ga0495633_0000235 3300046558 Bacteria 67807
228 Ga0495667_0001691 3300046559 Bacteria 14642
229 Ga0495667_0057446 3300046559 Bacteria 2557
230 Ga0495635_0040446 3300046663 Bacteria 3222
231 Ga0495661_0000389 3300046665 Bacteria 47005
232 Ga0495588_0000127 3300046674 Bacteria 125854
233 Ga0495623_0074561 3300046679 Bacteria 2108
234 Ga0495613_0089694 3300046689 Bacteria 2227
235 Ga0495613_0111496 3300046689 Bacteria 1971
236 Ga0495600_0038347 3300046809 Bacteria 3118
237 Ga0495604_0109032 3300047317 Bacteria 2021
238 Ga0495674_0349225 3300047319 Bacteria 1201
239 Ga0495672_0000207 3300047320 Bacteria 84093
240 Ga0495676_0074297 3300047321 Bacteria 2604
241 Ga0495680_0078029 3300047322 Bacteria 2507
242 Ga0495680_0122285 3300047322 Bacteria 1920
243 Ga0495687_000075 3300047443 Bacteria 152218
244 Ga0495675_0043219 3300047444 Bacteria 2871
245 Ga0495602_0145279 3300048088 Bacteria 1872
246 Ga0496100_0021564 3300048903 Bacteria 3882
247 Ga0496100_0106576 3300048903 Bacteria 1940
248 Ga0496101_0002791 3300048904 Bacteria 10711
249 Ga0496104_0047309 3300048907 Bacteria 4054
250 Ga0496105_0050290 3300048908 Bacteria 3442
251 Ga0496106_0032384 3300048909 Bacteria 3897
252 Ga0496107_0000115 3300048910 Bacteria 39165
253 Ga0496109_0008629 3300048912 Bacteria 8674
254 Ga0496109_0037931 3300048912 Bacteria 4355
255 Ga0496109_0167556 3300048912 Bacteria 2060
256 Ga0496110_0071897 3300048913 Bacteria 3068
257 Ga0496111_0110491 3300048914 Bacteria 2024
258 Ga0496112_0017617 3300048915 Bacteria 6717
259 Ga0496112_0089691 3300048915 Bacteria 3043
260 Ga0496112_0150034 3300048915 Bacteria 2298
261 Ga0496114_0007793 3300048917 Bacteria 8472
262 Ga0496115_0001200 3300048918 Bacteria 18577
263 Ga0496115_0091125 3300048918 Bacteria 2491
264 Ga0496116_0000348 3300048919 Bacteria 73391
265 Ga0496116_0001699 3300048919 Bacteria 24122
266 Ga0496116_0008328 3300048919 Bacteria 9010
267 Ga0496119_0000245 3300048922 Bacteria 76429
268 Ga0496119_0002698 3300048922 Bacteria 19173
269 Ga0496120_0000024 3300048923 Bacteria 236853
270 Ga0496120_0003760 3300048923 Bacteria 13429
271 Ga0496122_0001284 3300048925 Bacteria 41705
272 Ga0496123_0001054 3300048926 Bacteria 41705
273 Ga0496124_0152571 3300048927 Bacteria 1810
274 Ga0496125_0000043 3300048928 Bacteria 301512
275 Ga0501316_002386 3300049532 Eukaryota 1737
276 Ga0501032_0000723 3300049569 Bacteria 26918
277 Ga0501034_0015994 3300049571 Bacteria 7702
278 Ga0501034_0036497 3300049571 Bacteria 4980
279 Ga0501034_0189620 3300049571 Bacteria 2019
280 Ga0501037_0001393 3300049573 Bacteria 17736
281 Ga0501037_0006639 3300049573 Bacteria 8462
282 Ga0501038_0272474 3300049574 Bacteria 1334
283 Ga0501038_0279233 3300049574 Bacteria 1315
284 Ga0501043_0000264 3300049579 Bacteria 47682
285 Ga0501070_0094506 3300049586 Bacteria 2474
286 Ga0501077_0009946 3300049593 Bacteria 5919
287 Ga0501080_0032176 3300049742 Bacteria 4890
288 Ga0501044_0006192 3300049823 Bacteria 13223
289 Ga0501044_0206592 3300049823 Bacteria 1920
290 nmdc:mga05p37_18807_c1 3300050507 Bacteria 8349
291 nmdc:mga05p37_52692_c1 3300050507 Bacteria 5002
292 nmdc:mga05p37_73510_c1 3300050507 Bacteria 4207
293 nmdc:mga0qj67_14693_c1 3300050509 Bacteria 5919
294 nmdc:mga0qj67_95393_c1 3300050509 Bacteria 2394
295 nmdc:mga08y16_237159_c1 3300050511 Bacteria 1886
296 nmdc:mga0n895_4021_c1 3300050512 Bacteria 11967
297 nmdc:mga0n895_77900_c1 3300050512 Bacteria 3298
298 nmdc:mga0rr50_119781_c1 3300050513 Bacteria 2093
299 nmdc:mga0rr50_87660_c1 3300050513 Bacteria 2416
300 nmdc:mga08x19_114701_c1 3300050514 Bacteria 1800
301 nmdc:mga0a205_17251_c1 3300050515 Bacteria 6764
302 Ga0495595_0044141 3300053084 Bacteria 2047
303 2740993180 2740891818 Bacteria 6711283
304 2858804890 2858800743 Bacteria 6603254
305 2894025304 2894023352 Bacteria 5167372
306 2921205104 2921201388 Bacteria 6926299
307 2932423376 2932422444 Bacteria 4678430
308 2937109187 2937106411 Bacteria 6947143
309 2957459485 2957457609 Bacteria 6967680
310 2964644595 2964643177 Bacteria 6820887
311 Ga0247519_100972
312 rootH1_10023008
313 Ga0006555J51386_1003902
314 Ga0006560J51390_1003102
315 Ga0058860_10001017
316 Ga0065712_10071293
317 Ga0070682_100005563
318 Ga0070668_100028389
319 Ga0070668_100061303
320 Ga0070674_100030255
321 Ga0070709_10009069
322 Ga0070705_100127911
323 Ga0070700_100121404
324 Ga0070694_100040866
325 Ga0070694_100129624
326 Ga0070708_100037669
327 Ga0070708_100256855
328 Ga0070663_100012924
329 Ga0070662_100030876
330 Ga0068867_100000860
331 Ga0070706_100000836
332 Ga0070706_100004941
333 Ga0070706_100144815
334 Ga0070706_100220732
335 Ga0070707_100002970
336 Ga0070707_100013100
337 Ga0070707_100018428
338 Ga0070707_100106333
339 Ga0070707_100218339
340 Ga0070707_100237128
341 Ga0070707_100250140
342 Ga0070698_100004261
343 Ga0070698_100008960
344 Ga0070698_100022508
345 Ga0070698_100035321
346 Ga0070699_100000224
347 Ga0070699_100004764
348 Ga0070699_100005579
349 Ga0070684_100107950
350 Ga0070697_100132298
351 Ga0070672_100025112
352 Ga0070672_100106975
353 Ga0070696_100021287
354 Ga0070704_100000374
355 Ga0068859_100024377
356 Ga0068859_100240609
357 Ga0068861_100003266
358 Ga0068863_100029327
359 Ga0068863_100055056
360 Ga0068863_100161455
361 Ga0068860_100002328
362 Ga0068860_100007173
363 Ga0068862_100010145
364 Ga0068862_100020177
365 Ga0081455_10012109
366 Ga0081455_10044556
367 Ga0081538_10006319
368 Ga0075367_10010605
369 Ga0075428_100059798
370 Ga0075428_100201093
371 Ga0075430_100039917
372 Ga0075430_100079713
373 Ga0075431_100202106
374 Ga0075433_10021090
375 Ga0075434_100013397
376 Ga0075434_100078458
377 Ga0075429_100000576
378 Ga0075429_100171889
379 Ga0075429_100311920
380 Ga0068865_100007223
381 Ga0075436_100082910
382 Ga0097620_100024377
383 Ga0097620_100240614
384 Ga0099794_10048909
385 Ga0105240_10007108
386 Ga0105240_10031476
387 Ga0105240_10119447
388 Ga0114129_10059156
389 Ga0114129_10095802
390 Ga0114129_10165941
391 Ga0105248_10011572
392 Ga0105238_10051571
393 Ga0105239_10003515
394 Ga0105239_10040848
395 Ga0157374_10027395
396 Ga0157374_10085208
397 Ga0157378_10047862
398 Ga0157375_10050728
399 Ga0157375_10052749
400 Ga0157375_10087582
401 Ga0163163_10010203
402 Ga0163163_10389753
403 Ga0157379_10040581
404 Ga0206355_1221602
405 Ga0247514_102327
406 Ga0247518_101849
407 Ga0247516_101479
408 Ga0247513_102079
409 Ga0247520_101146
410 Ga0247517_101173
411 Ga0247512_102144
412 Ga0207642_10013968
413 Ga0207699_10031026
414 Ga0207645_10089713
415 Ga0207684_10000202
416 Ga0207684_10001067
417 Ga0207684_10003724
418 Ga0207684_10051713
419 Ga0207695_10013361
420 Ga0207646_10001324
421 Ga0207646_10011814
422 Ga0207646_10013291
423 Ga0207646_10151540
424 Ga0207664_10017942
425 Ga0207644_10039002
426 Ga0207706_10072167
427 Ga0207686_10003207
428 Ga0207669_10010333
429 Ga0207704_10014863
430 Ga0207691_10015699
431 Ga0207711_10382974
432 Ga0207679_10161084
433 Ga0207651_10238206
434 Ga0207668_10039342
435 Ga0207668_10043046
436 Ga0207678_10022671
437 Ga0207708_10076442
438 Ga0207641_10053955
439 Ga0207648_10000823
440 Ga0207648_10214658
441 Ga0207675_100002092
442 Ga0207675_100009617
443 Ga0268266_10000050
444 Ga0268266_10147762
445 Ga0268265_10006067
446 Ga0268264_10014315
447 Ga0268264_10136039
448 Ga0265316_10026108
449 Ga0307408_100299313
450 Ga0310107_102225
451 Ga0310108_101885
452 Ga0310113_102190
453 Ga0316575_10011426
454 Ga0310111_101906
455 Ga0310114_102678
456 Ga0310101_102275
457 Ga0316579_10000566
458 Ga0316578_10008722
459 Ga0316578_10030108
460 Ga0316042_102515
461 Ga0316042_103407
462 Ga0316043_102272
463 Ga0307409_100019219
464 Ga0307409_100051874
465 Ga0307411_10011255
466 Ga0307415_100018753
467 Ga0316583_10032243
468 Ga0316583_10034458
469 Ga0316593_10017315
470 Ga0316593_10022448
471 Ga0316593_10027487
472 Ga0316574_0087049
473 Ga0373931_0083147
474 Ga0373927_0011927
475 Ga0373927_0084566
476 Ga0373947_0013729
477 Ga0373937_0046807
478 Ga0373937_0097683
479 Ga0310112_002256
480 Ga0372808_002407
481 Ga0310109_002310
482 Ga0310109_002383
483 Ga0310109_004203
484 Ga0310110_004026
485 Ga0310110_005712
486 Ga0316582_0022772
487 Ga0316582_0063283
488 Ga0373925_0031164
489 Ga0373925_0128474
490 Ga0395899_0103638
491 Ga0395900_0013687
492 Ga0395900_0050987
493 Ga0395905_0000113
494 Ga0395905_0013299
495 Ga0395901_0020102
496 Ga0400486_21503
497 Ga0436365_0848006
498 Ga0436365_1574874
499 Ga0436365_1661760
500 Ga0436363_1383688
501 Ga0451846_24129
502 Ga0451848_02719
503 Ga0451850_06174
504 Ga0451854_23538
505 Ga0452271_72547
506 Ga0451577_0012539
507 Ga0451577_0084782
508 Ga0453683_0000595
509 Ga0453683_0019224
510 Ga0466965_0040947
511 Ga0466963_0025997
512 Ga0453684_0000017
513 Ga0453684_0000153
514 Ga0453684_0004739
515 Ga0453684_0008181
516 Ga0453684_0203448
517 Ga0466957_0000260
518 Ga0451576_0000029
519 Ga0451576_0000312
520 Ga0451576_0003388
521 Ga0451576_0048520
522 Ga0466958_0017926
523 Ga0466967_0111130
524 Ga0495592_0056379
525 Ga0495605_0000063
526 Ga0495664_0077989
527 Ga0495584_0000171
528 Ga0495606_0007114
529 Ga0495608_0012760
530 Ga0495628_0009785
531 Ga0495630_0061904
532 Ga0495630_0143999
533 Ga0495632_0000062
534 Ga0495652_0095827
535 Ga0495586_0022723
536 Ga0495597_0000204
537 Ga0495633_0000235
538 Ga0495667_0001691
539 Ga0495667_0057446
540 Ga0495635_0040446
541 Ga0495661_0000389
542 Ga0495588_0000127
543 Ga0495623_0074561
544 Ga0495613_0089694
545 Ga0495613_0111496
546 Ga0495600_0038347
547 Ga0495604_0109032
548 Ga0495674_0349225
549 Ga0495672_0000207
550 Ga0495676_0074297
551 Ga0495680_0078029
552 Ga0495680_0122285
553 Ga0495687_000075
554 Ga0495675_0043219
555 Ga0495602_0145279
556 Ga0496100_0021564
557 Ga0496100_0106576
558 Ga0496101_0002791
559 Ga0496104_0047309
560 Ga0496105_0050290
561 Ga0496106_0032384
562 Ga0496107_0000115
563 Ga0496109_0008629
564 Ga0496109_0037931
565 Ga0496109_0167556
566 Ga0496110_0071897
567 Ga0496111_0110491
568 Ga0496112_0017617
569 Ga0496112_0089691
570 Ga0496112_0150034
571 Ga0496114_0007793
572 Ga0496115_0001200
573 Ga0496115_0091125
574 Ga0496116_0000348
575 Ga0496116_0001699
576 Ga0496116_0008328
577 Ga0496119_0000245
578 Ga0496119_0002698
579 Ga0496120_0000024
580 Ga0496120_0003760
581 Ga0496122_0001284
582 Ga0496123_0001054
583 Ga0496124_0152571
584 Ga0496125_0000043
585 Ga0501316_002386
586 Ga0501032_0000723
587 Ga0501034_0015994
588 Ga0501034_0036497
589 Ga0501034_0189620
590 Ga0501037_0001393
591 Ga0501037_0006639
592 Ga0501038_0272474
593 Ga0501038_0279233
594 Ga0501043_0000264
595 Ga0501070_0094506
596 Ga0501077_0009946
597 Ga0501080_0032176
598 Ga0501044_0006192
599 Ga0501044_0206592
600 nmdc:mga05p37_18807_c1
601 nmdc:mga05p37_52692_c1
602 nmdc:mga05p37_73510_c1
603 nmdc:mga0qj67_14693_c1
604 nmdc:mga0qj67_95393_c1
605 nmdc:mga08y16_237159_c1
606 nmdc:mga0n895_4021_c1
607 nmdc:mga0n895_77900_c1
608 nmdc:mga0rr50_119781_c1
609 nmdc:mga0rr50_87660_c1
610 nmdc:mga08x19_114701_c1
611 nmdc:mga0a205_17251_c1
612 Ga0495595_0044141
613 2740993180
614 2858804890
615 2894025304
616 2921205104
617 2932423376
618 2937109187
619 2957459485
620 2964644595

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02801

Ketoacyl-synt_C

Beta-ketoacyl synthase, C-terminal domain

338

452

0.97

PF00109

ketoacyl-synt

Beta-ketoacyl synthase, N-terminal domain

83

330

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5sn5-assembly1.cif.gz_A pandda analysis group deposition -- crystal structure of pseudomonas aeruginosa fabf-c164q mutant protein in complex with z2856434897 0.9926 2 411
5sxo-assembly1.cif.gz_A-2 1.35 angstrom resolution crystal structure of beta-ketoacyl-acp synthase ii (fabf) from listeria monocytogenes 0.9924 1 410
1e5m-assembly1.cif.gz_A-2 beta ketoacyl acyl carrier protein synthase ii (kasii) from synechocystis sp. 0.9919 1 411
4jpf-assembly1.cif.gz_A structure of wild type pseudomonas aeruginosa fabf (kasii) in complex with ligand 0.9917 1 411
4r8e-assembly1.cif.gz_B crystal structure of beta-ketoacyl-acp synthase ii (fabf) from yersinia pestis 0.9911 1 410
ID Description Score Start End Superfamily
af_P0AAI5_1_413_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9927 2 410 3.40.47.10
1tqyG02 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9915 258 408 3.40.47.10
1j3nB02 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9905 262 404 3.40.47.10
af_C6KT99_32_472_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9898 2 411 3.40.47.10
af_P0AAI5_1_413_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9855 2 410 3.40.47.10
ID Description Score Start End GO Terms
AF-A0A661Q8Q5-F1-model_v4 Beta-ketoacyl-[acyl-carrier-protein] synthase II 0.9996 295 410 GO:0004315
GO:0005829
GO:0006633
AF-A0A533SQL7-F1-model_v4 Beta-ketoacyl-ACP synthase II (EC 2.3.1.179) 0.9963 2 344 GO:0004315
GO:0005829
GO:0006633
AF-A0A7Y3MDH5-F1-model_v4 Beta-ketoacyl-ACP synthase II (EC 2.3.1.179) 0.9963 153 411 GO:0004315
GO:0005829
GO:0006633
AF-A0A2V5RFL5-F1-model_v4 Beta-ketoacyl-[acyl-carrier-protein] synthase II 0.9962 252 411 GO:0004315
GO:0005829
GO:0006633
AF-A0A7W0J4U6-F1-model_v4 Beta-ketoacyl-ACP synthase II (EC 2.3.1.179) 0.9954 2 357 GO:0004315
GO:0005829
GO:0006633

Map