F399455

General Info

Members Datasets Scaffolds Average Seq Length
307 209 614 425

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2935409751|2935412481
Length 505
Sequence TAGARDAPRGGYRCHVTPSAAASDASLPHVVIVGGGFAGVNAAKALAKAPVRITLIDRRVYNTFQPLLYQVATGGLNPGDVTHFLRSLRMHQPNLDIVHEHLMEIDPEARSVRLLDGKTIDYDYLVLANGVTTAYFGTPGAKEHAFAVYSRSQAIRIRDTLFTRLELATQQEGRTDGLHVVVVGGGATGVEMAGSLAELRDQGLRPAYPELDGEAFRITIVQRGQELLKPFMPKLRSYAAAQLGKRDVELCLGAGVAEVQERAVVLTDGRSIPSDMTVWATGVAPHEEVQYWSLPLDGNGRIRVGEDLQVDGLPGVFAAGDVAIAPQDLPQLAQPAIQGGRHIGRQIIRILAGQPTERFEYHDKGQLAIIGRRSAVGEIPGLASLPVLHAMGFLGRMPGFRRLIGLTGYTAWAAWLFVHINSLLGSRNRLSTMVGLWARYGFRRWRTPVPIVGDVPAIRPSKAERLRLTPEQLKATEAALASDRADEVIKVESPAESNTTVAPVD

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
51 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
53 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
71 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
72 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
73 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
74 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
75 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
76 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
79 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
80 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
81 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
82 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
83 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
84 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
85 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
86 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
87 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
88 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
89 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
90 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
91 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
92 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
93 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
96 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
97 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
98 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
99 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
100 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
101 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
102 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
103 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
104 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
105 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
109 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
110 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
111 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
112 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
113 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
114 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
115 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
116 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
117 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
118 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
119 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
120 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
121 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
122 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
123 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
124 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
125 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
126 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
127 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
128 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
129 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
130 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
131 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
132 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
133 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
134 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
135 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
136 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
137 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
140 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
141 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
142 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
143 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
144 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
145 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
157 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
160 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
161 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
162 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
163 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
164 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
165 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
166 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
169 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
170 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
171 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
172 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
173 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
174 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
175 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
176 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
177 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
178 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
179 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
180 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
181 2643221613 Oerskovia sp. Root22 Isolate Unclassified
182 2643221679 Angustibacter sp. Root456 Isolate Unclassified
183 2643221721 Oerskovia sp. Root918 Isolate Unclassified
184 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
185 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
186 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
187 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
188 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
189 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
190 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
191 2808606394 Promicromonospora sp. C35 Isolate Unclassified
192 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
193 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
194 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
195 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
196 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
197 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
198 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
199 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
200 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
201 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
202 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
203 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
204 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
205 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
206 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
207 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
208 8036736890 Flavobacterium dauae TCH3-2 Isolate Rhizosphere
209 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.9
Metatranscriptomes 0.33
Isolates 9.77

Biome Distribution

Category Percentage (%)
Aerial Root 0.33
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.61
Rhizosphere 88.6
Stem 0
Stem Tuber 0
Unclassified 1.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10011855 3300003203 Bacteria 3805
2 Ga0070680_100006429 3300005336 Bacteria 8929
3 Ga0070668_100124623 3300005347 Bacteria 2063
4 Ga0070671_100096347 3300005355 Bacteria 2481
5 Ga0070674_100089597 3300005356 Bacteria 2217
6 Ga0070674_100172872 3300005356 Bacteria 1649
7 Ga0070714_100000734 3300005435 Bacteria 23229
8 Ga0070714_100004215 3300005435 Bacteria 10832
9 Ga0070714_100019081 3300005435 Bacteria 5580
10 Ga0070713_100012077 3300005436 Bacteria 6323
11 Ga0070713_100126325 3300005436 Bacteria 2250
12 Ga0070708_100005210 3300005445 Bacteria 10292
13 Ga0070708_100017266 3300005445 Bacteria 6013
14 Ga0070708_100048733 3300005445 Bacteria 3746
15 Ga0070678_100002456 3300005456 Bacteria 10158
16 Ga0070662_100015833 3300005457 Bacteria 5057
17 Ga0070662_100226563 3300005457 Bacteria 1494
18 Ga0070681_10001099 3300005458 Bacteria 23120
19 Ga0070706_100002416 3300005467 Bacteria 18820
20 Ga0070706_100009762 3300005467 Bacteria 8919
21 Ga0070706_100273941 3300005467 Bacteria 1575
22 Ga0070707_100000183 3300005468 Bacteria 61638
23 Ga0070707_100001270 3300005468 Bacteria 24819
24 Ga0070707_100119219 3300005468 Bacteria 2561
25 Ga0070707_100143042 3300005468 Bacteria 2328
26 Ga0070698_100000044 3300005471 Bacteria 88151
27 Ga0070698_100000642 3300005471 Bacteria 37543
28 Ga0070698_100001295 3300005471 Bacteria 27867
29 Ga0070698_100005616 3300005471 Bacteria 13716
30 Ga0070698_100009913 3300005471 Bacteria 10184
31 Ga0070699_100000443 3300005518 Bacteria 39775
32 Ga0070699_100004852 3300005518 Bacteria 11868
33 Ga0070679_100000311 3300005530 Bacteria 41294
34 Ga0068853_100072010 3300005539 Bacteria 3011
35 Ga0070696_100004008 3300005546 Bacteria 9816
36 Ga0070696_100033894 3300005546 Bacteria 3511
37 Ga0070704_100171920 3300005549 Bacteria 1724
38 Ga0068852_100160917 3300005616 Bacteria 2096
39 Ga0068859_100109135 3300005617 Unclassified 2828
40 Ga0068861_100114963 3300005719 Bacteria 2162
41 Ga0068851_10073870 3300005834 Bacteria 1769
42 Ga0081455_10000737 3300005937 Bacteria 42512
43 Ga0081455_10043509 3300005937 Bacteria 3927
44 Ga0081455_10065585 3300005937 Bacteria 3036
45 Ga0081455_10192645 3300005937 Bacteria 1534
46 Ga0081455_10202951 3300005937 Bacteria 1483
47 Ga0081538_10006880 3300005981 Bacteria 9900
48 Ga0081538_10012391 3300005981 Bacteria 6834
49 Ga0081538_10016157 3300005981 Bacteria 5738
50 Ga0081540_1004239 3300005983 Bacteria 11015
51 Ga0081539_10000236 3300005985 Bacteria 129646
52 Ga0070717_10052337 3300006028 Bacteria 3363
53 Ga0070717_10118637 3300006028 Bacteria 2264
54 Ga0075432_10000398 3300006058 Bacteria 12679
55 Ga0075432_10009842 3300006058 Bacteria 3250
56 Ga0075428_100062759 3300006844 Bacteria 4067
57 Ga0075428_100083442 3300006844 Bacteria 3487
58 Ga0075431_100169524 3300006847 Bacteria 2243
59 Ga0075431_100226991 3300006847 Bacteria 1903
60 Ga0075431_100271467 3300006847 Bacteria 1718
61 Ga0075433_10001708 3300006852 Bacteria 16382
62 Ga0075433_10005431 3300006852 Bacteria 10010
63 Ga0075433_10147679 3300006852 Bacteria 2090
64 Ga0075434_100004328 3300006871 Bacteria 12772
65 Ga0075434_100004603 3300006871 Bacteria 12453
66 Ga0075434_100015721 3300006871 Bacteria 7263
67 Ga0075429_100066047 3300006880 Bacteria 3149
68 Ga0068865_100020978 3300006881 Bacteria 4245
69 Ga0068865_100198956 3300006881 Bacteria 1555
70 Ga0075436_100002186 3300006914 Bacteria 13483
71 Ga0075436_100030132 3300006914 Bacteria 3734
72 Ga0097620_100109131 3300006931 Unclassified 2828
73 Ga0075435_100000562 3300007076 Bacteria 22817
74 Ga0111539_10236283 3300009094 Bacteria 2128
75 Ga0105245_10045568 3300009098 Bacteria 3917
76 Ga0105245_10055508 3300009098 Bacteria 3558
77 Ga0114129_10027600 3300009147 Bacteria 8039
78 Ga0114129_10049332 3300009147 Bacteria 5914
79 Ga0114129_10076821 3300009147 Bacteria 4648
80 Ga0105243_10030279 3300009148 Bacteria 4165
81 Ga0105243_10047453 3300009148 Bacteria 3381
82 Ga0105242_10128914 3300009176 Bacteria 2181
83 Ga0105242_10161915 3300009176 Bacteria 1959
84 Ga0105249_10097374 3300009553 Bacteria 2761
85 Ga0105249_10123412 3300009553 Bacteria 2464
86 Ga0105239_10169204 3300010375 Bacteria 2443
87 Ga0157369_10016256 3300013105 Bacteria 8375
88 Ga0163162_10303846 3300013306 Bacteria 1728
89 Ga0157372_10137377 3300013307 Bacteria 2816
90 Ga0157380_10000002 3300014326 Bacteria 236273
91 Ga0157380_10013815 3300014326 Bacteria 5897
92 Ga0157380_10227624 3300014326 Bacteria 1672
93 Ga0213875_10000681 3300021388 Bacteria 26594
94 Ga0224712_10008041 3300022467 Bacteria 3100
95 Ga0209759_1015068 3300025256 Bacteria 2012
96 Ga0207655_1003316 3300025728 Bacteria 12061
97 Ga0207688_10121054 3300025901 Bacteria 1527
98 Ga0207699_10005908 3300025906 Bacteria 5889
99 Ga0207684_10000624 3300025910 Bacteria 42122
100 Ga0207684_10005833 3300025910 Bacteria 11280
101 Ga0207684_10024806 3300025910 Bacteria 5111
102 Ga0207684_10224660 3300025910 Bacteria 1620
103 Ga0207707_10000296 3300025912 Bacteria 53027
104 Ga0207660_10001030 3300025917 Bacteria 18460
105 Ga0207652_10000711 3300025921 Bacteria 32344
106 Ga0207646_10000071 3300025922 Bacteria 141799
107 Ga0207646_10011852 3300025922 Bacteria 8411
108 Ga0207646_10096976 3300025922 Bacteria 2641
109 Ga0207646_10205078 3300025922 Bacteria 1781
110 Ga0207700_10007983 3300025928 Bacteria 6519
111 Ga0207700_10021816 3300025928 Bacteria 4380
112 Ga0207700_10075661 3300025928 Bacteria 2610
113 Ga0207664_10009180 3300025929 Bacteria 6931
114 Ga0207664_10039927 3300025929 Bacteria 3645
115 Ga0207709_10025036 3300025935 Bacteria 3414
116 Ga0207704_10079000 3300025938 Bacteria 2118
117 Ga0207675_100127925 3300026118 Bacteria 2407
118 Ga0207683_10002954 3300026121 Bacteria 14832
119 Ga0207698_10205679 3300026142 Bacteria 1767
120 Ga0209974_10036389 3300027876 Bacteria 1635
121 Ga0207428_10001010 3300027907 Bacteria 31237
122 Ga0207428_10008295 3300027907 Bacteria 9391
123 Ga0265338_10002851 3300028800 Bacteria 25265
124 Ga0316176_1204563 3300030732 Bacteria 2198
125 Ga0314311_1021477 3300030733 Bacteria 3614
126 Ga0265339_10006188 3300031249 Bacteria 7882
127 Ga0307408_100056287 3300031548 Bacteria 2851
128 Ga0316579_10061432 3300031691 Unclassified 1769
129 Ga0265314_10076653 3300031711 Bacteria 2221
130 Ga0307405_10023662 3300031731 Bacteria 3495
131 Ga0307405_10039698 3300031731 Bacteria 2847
132 Ga0307405_10156544 3300031731 Bacteria 1609
133 Ga0307405_10220642 3300031731 Bacteria 1391
134 Ga0307413_10015415 3300031824 Bacteria 3916
135 Ga0307413_10039373 3300031824 Bacteria 2748
136 Ga0307413_10063547 3300031824 Bacteria 2289
137 Ga0307413_10065210 3300031824 Bacteria 2267
138 Ga0307410_10000061 3300031852 Bacteria 38521
139 Ga0307410_10015342 3300031852 Bacteria 4541
140 Ga0307410_10076717 3300031852 Bacteria 2333
141 Ga0307406_10000301 3300031901 Bacteria 29054
142 Ga0307406_10171668 3300031901 Bacteria 1570
143 Ga0307407_10007788 3300031903 Bacteria 4874
144 Ga0307407_10016812 3300031903 Bacteria 3651
145 Ga0307407_10040063 3300031903 Bacteria 2609
146 Ga0307412_10142194 3300031911 Bacteria 1759
147 Ga0307409_100003331 3300031995 Bacteria 8691
148 Ga0307409_100100898 3300031995 Bacteria 2393
149 Ga0307409_100159489 3300031995 Bacteria 1970
150 Ga0307416_100000101 3300032002 Bacteria 53409
151 Ga0307416_100370855 3300032002 Bacteria 1457
152 Ga0307414_10018994 3300032004 Bacteria 4249
153 Ga0307414_10019327 3300032004 Bacteria 4219
154 Ga0307414_10081119 3300032004 Bacteria 2374
155 Ga0307411_10032808 3300032005 Bacteria 3213
156 Ga0307415_100004086 3300032126 Bacteria 7533
157 Ga0307415_100038524 3300032126 Bacteria 3151
158 Ga0307415_100095580 3300032126 Bacteria 2163
159 Ga0373950_0000012 3300034818 Bacteria 352408
160 Ga0373923_0009382 3300035111 Bacteria 3530
161 Ga0373932_0005131 3300035112 Bacteria 3078
162 Ga0373933_0000410 3300035724 Bacteria 26909
163 Ga0373937_0090153 3300036401 Bacteria 2839
164 Ga0316582_0092557 3300036647 Unclassified 1992
165 Ga0373925_0054398 3300037068 Bacteria 2994
166 Ga0436364_0383313 3300037853 Bacteria 88995
167 Ga0436363_0141577 3300039450 Bacteria 2079
168 Ga0451791_0442993 3300041451 Bacteria 3159
169 Ga0451843_0734500 3300041509 Bacteria 1965
170 Ga0451853_1984393 3300041512 Bacteria 4107
171 Ga0451853_2498599 3300041512 Bacteria 1683
172 Ga0439464_0022020 3300042439 Bacteria 1753
173 Ga0451577_0129193 3300042876 Bacteria 2266
174 Ga0439440_0008233 3300042993 Bacteria 2136
175 Ga0453683_0003302 3300044673 Bacteria 11939
176 Ga0466968_0016974 3300044735 Bacteria 2903
177 Ga0466960_0002231 3300044901 Bacteria 7239
178 Ga0466959_0037506 3300045049 Bacteria 3582
179 Ga0451576_0020936 3300045051 Bacteria 7117
180 Ga0495627_009513 3300046453 Bacteria 3573
181 Ga0495603_0153088 3300046455 Bacteria 1339
182 Ga0495629_0006640 3300046459 Bacteria 8561
183 Ga0495641_0059977 3300046461 Bacteria 1719
184 Ga0495653_0027079 3300046463 Bacteria 4590
185 Ga0495664_0008058 3300046477 Bacteria 5864
186 Ga0495608_0032266 3300046511 Bacteria 3540
187 Ga0495618_0046353 3300046514 Bacteria 2743
188 Ga0495630_0165515 3300046517 Bacteria 1683
189 Ga0495654_0091490 3300046530 Bacteria 1411
190 Ga0495665_0017257 3300046531 Bacteria 3884
191 Ga0495586_0003442 3300046535 Bacteria 8481
192 Ga0495587_0020502 3300046536 Bacteria 4080
193 Ga0495645_0028763 3300046543 Bacteria 4039
194 Ga0495645_0036042 3300046543 Bacteria 3606
195 Ga0495645_0048669 3300046543 Bacteria 3087
196 Ga0495667_0115309 3300046559 Bacteria 1735
197 Ga0495634_0015935 3300046642 Bacteria 5383
198 Ga0495657_0008954 3300046675 Bacteria 7617
199 Ga0495599_0065913 3300046678 Bacteria 2262
200 Ga0495623_0035674 3300046679 Bacteria 3187
201 Ga0495613_0066133 3300046689 Bacteria 2640
202 Ga0495624_0033433 3300046690 Bacteria 3330
203 Ga0495600_0030915 3300046809 Bacteria 3467
204 Ga0495674_0020287 3300047319 Bacteria 6155
205 Ga0495674_0152793 3300047319 Bacteria 1935
206 Ga0495593_0072044 3300047673 Bacteria 1794
207 Ga0495614_0052621 3300048089 Bacteria 1745
208 Ga0496102_0052183 3300048905 Bacteria 3725
209 Ga0496104_0259052 3300048907 Bacteria 1652
210 Ga0496108_0011117 3300048911 Bacteria 7312
211 Ga0496109_0025806 3300048912 Bacteria 5237
212 Ga0496110_0127613 3300048913 Bacteria 2295
213 Ga0496114_0048906 3300048917 Bacteria 3518
214 Ga0496115_0077520 3300048918 Bacteria 2702
215 Ga0496117_0010655 3300048920 Bacteria 8335
216 Ga0496118_0000305 3300048921 Bacteria 85218
217 Ga0496122_0072565 3300048925 Bacteria 2447
218 Ga0496124_0000181 3300048927 Bacteria 124426
219 Ga0496124_0005275 3300048927 Bacteria 14622
220 Ga0496126_0086007 3300048929 Bacteria 2771
221 Ga0501032_0007566 3300049569 Bacteria 7932
222 Ga0501033_0000572 3300049570 Bacteria 34349
223 Ga0501033_0086854 3300049570 Bacteria 2290
224 Ga0501034_0000144 3300049571 Bacteria 133266
225 Ga0501034_0006026 3300049571 Bacteria 13104
226 Ga0501036_0003307 3300049572 Bacteria 12869
227 Ga0501036_0007211 3300049572 Bacteria 9054
228 Ga0501037_0001496 3300049573 Bacteria 17086
229 Ga0501038_0002471 3300049574 Bacteria 17194
230 Ga0501039_0001498 3300049575 Bacteria 17179
231 Ga0501043_0001017 3300049579 Bacteria 24648
232 Ga0501043_0001877 3300049579 Bacteria 18019
233 Ga0501046_0000236 3300049580 Bacteria 56950
234 Ga0501046_0001873 3300049580 Bacteria 20020
235 Ga0501047_0000156 3300049581 Bacteria 83071
236 Ga0501047_0024831 3300049581 Bacteria 5754
237 Ga0501047_0067498 3300049581 Bacteria 3447
238 Ga0501048_0000093 3300049582 Bacteria 48141
239 Ga0501048_0017562 3300049582 Bacteria 5269
240 Ga0501068_0008716 3300049584 Bacteria 5656
241 Ga0501069_0000897 3300049585 Bacteria 14203
242 Ga0501069_0000903 3300049585 Bacteria 14150
243 Ga0501070_0001757 3300049586 Bacteria 19162
244 Ga0501070_0019538 3300049586 Bacteria 5681
245 Ga0501071_0136783 3300049587 Bacteria 1823
246 Ga0501072_0000101 3300049588 Bacteria 62983
247 Ga0501073_0002198 3300049589 Bacteria 14597
248 Ga0501073_0010335 3300049589 Bacteria 6851
249 Ga0501074_0000476 3300049590 Bacteria 24308
250 Ga0501077_0176624 3300049593 Bacteria 1357
251 Ga0501079_0000891 3300049741 Bacteria 20443
252 Ga0501080_0001133 3300049742 Bacteria 21938
253 Ga0501080_0013417 3300049742 Bacteria 7537
254 Ga0501035_0002034 3300049822 Bacteria 20160
255 Ga0501044_0010545 3300049823 Bacteria 10024
256 Ga0501044_0176415 3300049823 Bacteria 2106
257 Ga0501045_0241891 3300049824 Bacteria 1343
258 nmdc:mga05p37_143917_c1 3300050507 Bacteria 2920
259 nmdc:mga05p37_34341_c1 3300050507 Bacteria 6211
260 nmdc:mga05p37_493133_c1 3300050507 Bacteria 1408
261 nmdc:mga09592_273665_c1 3300050508 Bacteria 1465
262 nmdc:mga06r32_147170_c1 3300050510 Bacteria 2333
263 nmdc:mga06r32_172597_c1 3300050510 Bacteria 2146
264 nmdc:mga08y16_192236_c1 3300050511 Bacteria 2117
265 nmdc:mga08y16_6449_c1 3300050511 Bacteria 12306
266 nmdc:mga0n895_29913_c1 3300050512 Bacteria 5200
267 nmdc:mga0n895_59520_c1 3300050512 Bacteria 3768
268 nmdc:mga0rr50_281085_c1 3300050513 Bacteria 1389
269 nmdc:mga0rr50_45172_c1 3300050513 Bacteria 3236
270 nmdc:mga08x19_1536_c1 3300050514 Bacteria 14321
271 nmdc:mga0a205_160126_c1 3300050515 Bacteria 2148
272 nmdc:mga0a205_783_c1 3300050515 Bacteria 8523
273 nmdc:mga0a205_8686_c1 3300050515 Bacteria 9250
274 Ga0501084_0000220 3300054114 Bacteria 43634
275 Ga0501084_0002183 3300054114 Bacteria 15695
276 Ga0501082_0042043 3300060353 Bacteria 3940
277 Ga0530510_0194037 3300061734 Bacteria 1508
278 2935412481 2935409751 Bacteria 4179611
279 2644083980 2643221613 Bacteria 4622396
280 2644447367 2643221679 Bacteria 3839507
281 2644666758 2643221721 Bacteria 4486924
282 2723640087 2721755702 Bacteria 4373124
283 2738694163 2738541272 Bacteria 6848551
284 2739325299 2738543027 Bacteria 6409078
285 2739609336 2739367654 Bacteria 6049412
286 2753303153 2751185788 Bacteria 4541048
287 2760305543 2758568522 Bacteria 5953541
288 2760625976 2758568621 Bacteria 5967089
289 2809030984 2808606394 Bacteria 6248540
290 2835188627 2835188231 Bacteria 3476928
291 2839987833 2839986021 Bacteria 3685650
292 2883826579 2883821847 Bacteria 5121194
293 2893684941 2893684298 Bacteria 2897960
294 2904431874 2904430863 Bacteria 3486923
295 2904504385 2904501621 Bacteria 3401437
296 2908676607 2908674828 Bacteria 3382763
297 2909077270 2909074476 Bacteria 3436050
298 2919041668 2919039151 Bacteria 3391018
299 2919042421 2919042368 Bacteria 3905917
300 2928106098 2928104781 Bacteria 3877447
301 2928502911 2928500415 Bacteria 3384541
302 2932432618 2932431166 Bacteria 4215299
303 2935893489 2935890801 Bacteria 4593001
304 2966925209 2966924647 Bacteria 3268643
305 2984551524 2984551494 Bacteria 3877562
306 8036738198 8036736890 Bacteria 2944828
307 8056584363 8056579771 Bacteria 5840325
308 JGI25406J46586_10011855
309 Ga0070680_100006429
310 Ga0070668_100124623
311 Ga0070671_100096347
312 Ga0070674_100089597
313 Ga0070674_100172872
314 Ga0070714_100000734
315 Ga0070714_100004215
316 Ga0070714_100019081
317 Ga0070713_100012077
318 Ga0070713_100126325
319 Ga0070708_100005210
320 Ga0070708_100017266
321 Ga0070708_100048733
322 Ga0070678_100002456
323 Ga0070662_100015833
324 Ga0070662_100226563
325 Ga0070681_10001099
326 Ga0070706_100002416
327 Ga0070706_100009762
328 Ga0070706_100273941
329 Ga0070707_100000183
330 Ga0070707_100001270
331 Ga0070707_100119219
332 Ga0070707_100143042
333 Ga0070698_100000044
334 Ga0070698_100000642
335 Ga0070698_100001295
336 Ga0070698_100005616
337 Ga0070698_100009913
338 Ga0070699_100000443
339 Ga0070699_100004852
340 Ga0070679_100000311
341 Ga0068853_100072010
342 Ga0070696_100004008
343 Ga0070696_100033894
344 Ga0070704_100171920
345 Ga0068852_100160917
346 Ga0068859_100109135
347 Ga0068861_100114963
348 Ga0068851_10073870
349 Ga0081455_10000737
350 Ga0081455_10043509
351 Ga0081455_10065585
352 Ga0081455_10192645
353 Ga0081455_10202951
354 Ga0081538_10006880
355 Ga0081538_10012391
356 Ga0081538_10016157
357 Ga0081540_1004239
358 Ga0081539_10000236
359 Ga0070717_10052337
360 Ga0070717_10118637
361 Ga0075432_10000398
362 Ga0075432_10009842
363 Ga0075428_100062759
364 Ga0075428_100083442
365 Ga0075431_100169524
366 Ga0075431_100226991
367 Ga0075431_100271467
368 Ga0075433_10001708
369 Ga0075433_10005431
370 Ga0075433_10147679
371 Ga0075434_100004328
372 Ga0075434_100004603
373 Ga0075434_100015721
374 Ga0075429_100066047
375 Ga0068865_100020978
376 Ga0068865_100198956
377 Ga0075436_100002186
378 Ga0075436_100030132
379 Ga0097620_100109131
380 Ga0075435_100000562
381 Ga0111539_10236283
382 Ga0105245_10045568
383 Ga0105245_10055508
384 Ga0114129_10027600
385 Ga0114129_10049332
386 Ga0114129_10076821
387 Ga0105243_10030279
388 Ga0105243_10047453
389 Ga0105242_10128914
390 Ga0105242_10161915
391 Ga0105249_10097374
392 Ga0105249_10123412
393 Ga0105239_10169204
394 Ga0157369_10016256
395 Ga0163162_10303846
396 Ga0157372_10137377
397 Ga0157380_10000002
398 Ga0157380_10013815
399 Ga0157380_10227624
400 Ga0213875_10000681
401 Ga0224712_10008041
402 Ga0209759_1015068
403 Ga0207655_1003316
404 Ga0207688_10121054
405 Ga0207699_10005908
406 Ga0207684_10000624
407 Ga0207684_10005833
408 Ga0207684_10024806
409 Ga0207684_10224660
410 Ga0207707_10000296
411 Ga0207660_10001030
412 Ga0207652_10000711
413 Ga0207646_10000071
414 Ga0207646_10011852
415 Ga0207646_10096976
416 Ga0207646_10205078
417 Ga0207700_10007983
418 Ga0207700_10021816
419 Ga0207700_10075661
420 Ga0207664_10009180
421 Ga0207664_10039927
422 Ga0207709_10025036
423 Ga0207704_10079000
424 Ga0207675_100127925
425 Ga0207683_10002954
426 Ga0207698_10205679
427 Ga0209974_10036389
428 Ga0207428_10001010
429 Ga0207428_10008295
430 Ga0265338_10002851
431 Ga0316176_1204563
432 Ga0314311_1021477
433 Ga0265339_10006188
434 Ga0307408_100056287
435 Ga0316579_10061432
436 Ga0265314_10076653
437 Ga0307405_10023662
438 Ga0307405_10039698
439 Ga0307405_10156544
440 Ga0307405_10220642
441 Ga0307413_10015415
442 Ga0307413_10039373
443 Ga0307413_10063547
444 Ga0307413_10065210
445 Ga0307410_10000061
446 Ga0307410_10015342
447 Ga0307410_10076717
448 Ga0307406_10000301
449 Ga0307406_10171668
450 Ga0307407_10007788
451 Ga0307407_10016812
452 Ga0307407_10040063
453 Ga0307412_10142194
454 Ga0307409_100003331
455 Ga0307409_100100898
456 Ga0307409_100159489
457 Ga0307416_100000101
458 Ga0307416_100370855
459 Ga0307414_10018994
460 Ga0307414_10019327
461 Ga0307414_10081119
462 Ga0307411_10032808
463 Ga0307415_100004086
464 Ga0307415_100038524
465 Ga0307415_100095580
466 Ga0373950_0000012
467 Ga0373923_0009382
468 Ga0373932_0005131
469 Ga0373933_0000410
470 Ga0373937_0090153
471 Ga0316582_0092557
472 Ga0373925_0054398
473 Ga0436364_0383313
474 Ga0436363_0141577
475 Ga0451791_0442993
476 Ga0451843_0734500
477 Ga0451853_1984393
478 Ga0451853_2498599
479 Ga0439464_0022020
480 Ga0451577_0129193
481 Ga0439440_0008233
482 Ga0453683_0003302
483 Ga0466968_0016974
484 Ga0466960_0002231
485 Ga0466959_0037506
486 Ga0451576_0020936
487 Ga0495627_009513
488 Ga0495603_0153088
489 Ga0495629_0006640
490 Ga0495641_0059977
491 Ga0495653_0027079
492 Ga0495664_0008058
493 Ga0495608_0032266
494 Ga0495618_0046353
495 Ga0495630_0165515
496 Ga0495654_0091490
497 Ga0495665_0017257
498 Ga0495586_0003442
499 Ga0495587_0020502
500 Ga0495645_0028763
501 Ga0495645_0036042
502 Ga0495645_0048669
503 Ga0495667_0115309
504 Ga0495634_0015935
505 Ga0495657_0008954
506 Ga0495599_0065913
507 Ga0495623_0035674
508 Ga0495613_0066133
509 Ga0495624_0033433
510 Ga0495600_0030915
511 Ga0495674_0020287
512 Ga0495674_0152793
513 Ga0495593_0072044
514 Ga0495614_0052621
515 Ga0496102_0052183
516 Ga0496104_0259052
517 Ga0496108_0011117
518 Ga0496109_0025806
519 Ga0496110_0127613
520 Ga0496114_0048906
521 Ga0496115_0077520
522 Ga0496117_0010655
523 Ga0496118_0000305
524 Ga0496122_0072565
525 Ga0496124_0000181
526 Ga0496124_0005275
527 Ga0496126_0086007
528 Ga0501032_0007566
529 Ga0501033_0000572
530 Ga0501033_0086854
531 Ga0501034_0000144
532 Ga0501034_0006026
533 Ga0501036_0003307
534 Ga0501036_0007211
535 Ga0501037_0001496
536 Ga0501038_0002471
537 Ga0501039_0001498
538 Ga0501043_0001017
539 Ga0501043_0001877
540 Ga0501046_0000236
541 Ga0501046_0001873
542 Ga0501047_0000156
543 Ga0501047_0024831
544 Ga0501047_0067498
545 Ga0501048_0000093
546 Ga0501048_0017562
547 Ga0501068_0008716
548 Ga0501069_0000897
549 Ga0501069_0000903
550 Ga0501070_0001757
551 Ga0501070_0019538
552 Ga0501071_0136783
553 Ga0501072_0000101
554 Ga0501073_0002198
555 Ga0501073_0010335
556 Ga0501074_0000476
557 Ga0501077_0176624
558 Ga0501079_0000891
559 Ga0501080_0001133
560 Ga0501080_0013417
561 Ga0501035_0002034
562 Ga0501044_0010545
563 Ga0501044_0176415
564 Ga0501045_0241891
565 nmdc:mga05p37_143917_c1
566 nmdc:mga05p37_34341_c1
567 nmdc:mga05p37_493133_c1
568 nmdc:mga09592_273665_c1
569 nmdc:mga06r32_147170_c1
570 nmdc:mga06r32_172597_c1
571 nmdc:mga08y16_192236_c1
572 nmdc:mga08y16_6449_c1
573 nmdc:mga0n895_29913_c1
574 nmdc:mga0n895_59520_c1
575 nmdc:mga0rr50_281085_c1
576 nmdc:mga0rr50_45172_c1
577 nmdc:mga08x19_1536_c1
578 nmdc:mga0a205_160126_c1
579 nmdc:mga0a205_783_c1
580 nmdc:mga0a205_8686_c1
581 Ga0501084_0000220
582 Ga0501084_0002183
583 Ga0501082_0042043
584 Ga0530510_0194037
585 2935412481
586 2644083980
587 2644447367
588 2644666758
589 2723640087
590 2738694163
591 2739325299
592 2739609336
593 2753303153
594 2760305543
595 2760625976
596 2809030984
597 2835188627
598 2839987833
599 2883826579
600 2893684941
601 2904431874
602 2904504385
603 2908676607
604 2909077270
605 2919041668
606 2919042421
607 2928106098
608 2928502911
609 2932432618
610 2935893489
611 2966925209
612 2984551524
613 8036738198
614 8056584363

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

32

62

0.97

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

28

340

0.93

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

179

269

0.9

PF01134

GIDA

Glucose inhibited division protein A

29

91

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
7e0g-assembly1.cif.gz_A crystal structure of lysine specific demethylase 1 (lsd1) with tak-418, fad-adduct 0.9804 2 33
2z3y-assembly1.cif.gz_A crystal structure of lysine-specific demethylase1 0.9795 2 33
2dw4-assembly1.cif.gz_A crystal structure of human lsd1 at 2.3 a resolution 0.9787 2 33
4bay-assembly1.cif.gz_A phosphomimetic mutant of lsd1-8a splicing variant in complex with corest 0.9731 2 33
5l3b-assembly1.cif.gz_A human lsd1/corest: lsd1 d556g mutation 0.9714 2 33
ID Description Score Start End Superfamily
af_P95200_9_428_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.9397 2 397 3.50.50.100
af_Q6YZ09_48_354_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.9296 2 264 3.50.50.100
af_I1KF65_1_317_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.9246 23 300 3.50.50.100
af_Q5QLT6_55_454_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.9227 2 361 3.50.50.100
af_Q5AEC9_91_574_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.9195 2 403 3.50.50.100
ID Description Score Start End GO Terms
AF-A0A2G6DVU8-F1-model_v4 NADH:ubiquinone reductase (non-electrogenic) (EC 1.6.5.9) 0.9904 2 363 GO:0003954
GO:0006116
AF-A0A7W5JZ57-F1-model_v4 NADH dehydrogenase (EC 1.6.99.3) 0.9807 89 415 GO:0003955
GO:0016020
GO:0019646
AF-A0A5S4H080-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9801 2 407 GO:0003955
GO:0019646
AF-A0A5S4FG12-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9747 70 407 GO:0003955
GO:0016020
GO:0019646
AF-A0A2M9BJ74-F1-model_v4 NADH:ubiquinone reductase (non-electrogenic) (EC 1.6.5.9) 0.9733 2 408 GO:0003954
GO:0006116
GO:0016020

Map