F399117

General Info

Members Datasets Scaffolds Average Seq Length
307 156 614 374

Family's Representative Sequence

Representative Sequence 3300005981|Ga0081538_10004187|Ga0081538_100041872
Length 392
Sequence MRTTLRVIRSPDAGRIVASMPRDALDSMSEAVLAIAAEREVEPVLRRLVSSARELAGARYAALGIPDGEGAFAQFITAGMSDELIAAMGPLPRTHGLLGAMLESPEPHRTQDIRQHPRFRGWWPRAHPQMRSFLGVPIVARGSVIAAFYLTDKEGADGFDDGDQRLIEMLAAHAAVAIENARLLERSRELSIVEERNRLARELHDSVSQKLFGLVLTAEAASTLLGDEDGAAGEQVARLGELAQEALTELRELVFELRPPSLEDEGLAATLRKEVDVLRRVHGRAIELRIAGAASCAPEHEADVLRVAQEALGNALRHAEAERIELRMEARDGRLVVTVADDGVGFDPDAPGVRSRRLGLTSMEERARALGGSLAVVSRPGEGTTVTLEVPR

Samples

Sample ID Description Type Environment
1 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
90 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
91 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
95 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
96 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
97 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
100 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
103 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
104 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
105 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
106 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
107 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
108 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
109 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
110 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
111 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
112 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
113 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
114 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
117 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
118 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
119 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
120 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
125 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
126 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
127 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
128 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
148 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
151 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
155 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
156 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.35
Metatranscriptomes 0.65
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.49
Rhizosphere 90.88
Stem 0
Stem Tuber 0
Unclassified 0.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081538_10004187 3300005981 Bacteria 13390
2 Ga0070683_100022724 3300005329 Bacteria 5609
3 Ga0070683_100038402 3300005329 Bacteria 4389
4 Ga0070683_100257838 3300005329 Bacteria 1659
5 Ga0070680_100004355 3300005336 Bacteria 10644
6 Ga0070682_100012420 3300005337 Bacteria 4885
7 Ga0070682_100049228 3300005337 Bacteria 2627
8 Ga0070682_100189281 3300005337 Bacteria 1444
9 Ga0068868_100129701 3300005338 Bacteria 2062
10 Ga0070660_100013711 3300005339 Bacteria 5827
11 Ga0070689_100104821 3300005340 Bacteria 2242
12 Ga0070668_100083638 3300005347 Bacteria 2505
13 Ga0070668_100212990 3300005347 Bacteria 1590
14 Ga0070671_100256369 3300005355 Bacteria 1486
15 Ga0070659_100013609 3300005366 Bacteria 6061
16 Ga0070659_100048898 3300005366 Bacteria 3324
17 Ga0070659_100059603 3300005366 Bacteria 3013
18 Ga0070709_10166637 3300005434 Bacteria 1536
19 Ga0070714_100022982 3300005435 Bacteria 5117
20 Ga0070713_100128202 3300005436 Bacteria 2235
21 Ga0070694_100203797 3300005444 Bacteria 1476
22 Ga0070708_100027221 3300005445 Bacteria 4904
23 Ga0070663_100256029 3300005455 Bacteria 1387
24 Ga0070678_100036850 3300005456 Bacteria 3427
25 Ga0070662_100023098 3300005457 Bacteria 4268
26 Ga0070681_10036757 3300005458 Bacteria 4917
27 Ga0070698_100031437 3300005471 Bacteria 5504
28 Ga0070679_100014336 3300005530 Bacteria 7612
29 Ga0070684_100018903 3300005535 Bacteria 5689
30 Ga0070684_100037406 3300005535 Bacteria 4163
31 Ga0070684_100357598 3300005535 Bacteria 1344
32 Ga0070686_100044193 3300005544 Bacteria 2798
33 Ga0070696_100059440 3300005546 Bacteria 2672
34 Ga0070665_100096706 3300005548 Bacteria 2958
35 Ga0070704_100030730 3300005549 Bacteria 3602
36 Ga0070664_100094775 3300005564 Bacteria 2589
37 Ga0068856_100002734 3300005614 Bacteria 18057
38 Ga0068856_100137331 3300005614 Bacteria 2451
39 Ga0070702_100017016 3300005615 Bacteria 3743
40 Ga0070702_100079170 3300005615 Bacteria 1963
41 Ga0068852_100003529 3300005616 Bacteria 10943
42 Ga0068852_100019943 3300005616 Bacteria 5322
43 Ga0068866_10061739 3300005718 Bacteria 1947
44 Ga0068861_100103571 3300005719 Bacteria 2269
45 Ga0068861_100182310 3300005719 Bacteria 1749
46 Ga0068860_100066406 3300005843 Bacteria 3426
47 Ga0081455_10011260 3300005937 Bacteria 9000
48 Ga0081455_10056596 3300005937 Bacteria 3328
49 Ga0081455_10076963 3300005937 Bacteria 2746
50 Ga0081538_10002539 3300005981 Bacteria 17770
51 Ga0081538_10004890 3300005981 Bacteria 12198
52 Ga0081538_10009003 3300005981 Bacteria 8384
53 Ga0081538_10024002 3300005981 Bacteria 4360
54 Ga0081538_10036317 3300005981 Bacteria 3218
55 Ga0081538_10057333 3300005981 Bacteria 2270
56 Ga0081538_10071718 3300005981 Bacteria 1903
57 Ga0081538_10083876 3300005981 Bacteria 1682
58 Ga0081540_1001943 3300005983 Bacteria 17301
59 Ga0081540_1006102 3300005983 Bacteria 8855
60 Ga0081539_10001045 3300005985 Bacteria 50690
61 Ga0070717_10005654 3300006028 Bacteria 9133
62 Ga0070717_10018875 3300006028 Bacteria 5395
63 Ga0070717_10078099 3300006028 Bacteria 2773
64 Ga0070712_100006959 3300006175 Bacteria 7050
65 Ga0075428_100010009 3300006844 Bacteria 10533
66 Ga0068865_100028247 3300006881 Bacteria 3713
67 Ga0075435_100278486 3300007076 Bacteria 1428
68 Ga0105240_10131376 3300009093 Bacteria 3003
69 Ga0111539_10008207 3300009094 Bacteria 13288
70 Ga0111539_10036113 3300009094 Bacteria 5978
71 Ga0111539_10128528 3300009094 Bacteria 2968
72 Ga0111539_10226518 3300009094 Bacteria 2177
73 Ga0105245_10005709 3300009098 Bacteria 10929
74 Ga0105245_10136437 3300009098 Bacteria 2306
75 Ga0105245_10229432 3300009098 Bacteria 1795
76 Ga0105247_10097510 3300009101 Bacteria 1875
77 Ga0114129_10053451 3300009147 Bacteria 5664
78 Ga0105243_10270985 3300009148 Bacteria 1524
79 Ga0105243_10299706 3300009148 Bacteria 1456
80 Ga0105242_10373990 3300009176 Bacteria 1322
81 Ga0105237_10400294 3300009545 Bacteria 1378
82 Ga0105239_10013106 3300010375 Bacteria 9213
83 Ga0105246_10014791 3300011119 Bacteria 4914
84 Ga0157370_10039662 3300013104 Bacteria 4550
85 Ga0157372_10006405 3300013307 Bacteria 12526
86 Ga0157372_10048251 3300013307 Bacteria 4733
87 Ga0157375_10028753 3300013308 Bacteria 5216
88 Ga0157375_10609042 3300013308 Bacteria 1251
89 Ga0163163_10040476 3300014325 Bacteria 4550
90 Ga0157377_10004459 3300014745 Bacteria 6453
91 Ga0157376_10080818 3300014969 Bacteria 2789
92 Ga0206356_11795030 3300020070 Bacteria 3790
93 Ga0206353_10369188 3300020082 Bacteria 2190
94 Ga0207688_10002962 3300025901 Bacteria 9241
95 Ga0207688_10011869 3300025901 Bacteria 4741
96 Ga0207645_10129053 3300025907 Bacteria 1645
97 Ga0207684_10174540 3300025910 Bacteria 1853
98 Ga0207693_10010620 3300025915 Bacteria 7471
99 Ga0207660_10070428 3300025917 Bacteria 2542
100 Ga0207662_10047790 3300025918 Bacteria 2535
101 Ga0207657_10033988 3300025919 Bacteria 4591
102 Ga0207657_10140998 3300025919 Bacteria 1969
103 Ga0207649_10101978 3300025920 Bacteria 1901
104 Ga0207694_10050026 3300025924 Bacteria 3236
105 Ga0207687_10119118 3300025927 Bacteria 1971
106 Ga0207687_10314610 3300025927 Bacteria 1265
107 Ga0207664_10040672 3300025929 Bacteria 3617
108 Ga0207706_10056019 3300025933 Bacteria 3476
109 Ga0207706_10088366 3300025933 Bacteria 2725
110 Ga0207709_10088054 3300025935 Bacteria 2020
111 Ga0207709_10098237 3300025935 Bacteria 1930
112 Ga0207709_10187578 3300025935 Bacteria 1466
113 Ga0207670_10047079 3300025936 Bacteria 2870
114 Ga0207704_10003128 3300025938 Bacteria 7484
115 Ga0207704_10066508 3300025938 Bacteria 2263
116 Ga0207661_10064804 3300025944 Bacteria 2964
117 Ga0207661_10123970 3300025944 Bacteria 2204
118 Ga0207679_10085525 3300025945 Bacteria 2423
119 Ga0207679_10172392 3300025945 Bacteria 1782
120 Ga0207668_10149103 3300025972 Bacteria 1808
121 Ga0207668_10232298 3300025972 Bacteria 1488
122 Ga0207677_10198653 3300026023 Bacteria 1592
123 Ga0207639_10090666 3300026041 Bacteria 2445
124 Ga0207678_10016059 3300026067 Bacteria 6575
125 Ga0207708_10001179 3300026075 Bacteria 19666
126 Ga0207708_10005998 3300026075 Bacteria 9002
127 Ga0207708_10147459 3300026075 Bacteria 1850
128 Ga0207702_10019494 3300026078 Bacteria 5612
129 Ga0207702_10124951 3300026078 Bacteria 2308
130 Ga0207702_10136692 3300026078 Bacteria 2212
131 Ga0207648_10015342 3300026089 Bacteria 7049
132 Ga0207674_10102032 3300026116 Bacteria 2849
133 Ga0207675_100056862 3300026118 Bacteria 3649
134 Ga0207675_100098465 3300026118 Bacteria 2754
135 Ga0207675_100108532 3300026118 Bacteria 2618
136 Ga0207675_100113187 3300026118 Bacteria 2562
137 Ga0207698_10010798 3300026142 Bacteria 5891
138 Ga0207698_10110634 3300026142 Bacteria 2301
139 Ga0207698_10226100 3300026142 Bacteria 1695
140 Ga0207698_10255262 3300026142 Bacteria 1607
141 Ga0207428_10003304 3300027907 Bacteria 15682
142 Ga0268264_10025401 3300028381 Bacteria 4840
143 Ga0307405_10027172 3300031731 Bacteria 3314
144 Ga0307410_10245247 3300031852 Bacteria 1390
145 Ga0307412_10036929 3300031911 Bacteria 3135
146 Ga0307409_100017210 3300031995 Bacteria 4810
147 Ga0307416_100026852 3300032002 Bacteria 4251
148 Ga0307416_100035051 3300032002 Bacteria 3827
149 Ga0307414_10125854 3300032004 Bacteria 1980
150 Ga0307411_10329992 3300032005 Bacteria 1236
151 Ga0395899_0052109 3300037312 Bacteria 3034
152 Ga0395899_0105617 3300037312 Bacteria 2028
153 Ga0395900_0001398 3300037418 Bacteria 28860
154 Ga0395900_0009649 3300037418 Bacteria 9900
155 Ga0395900_0025404 3300037418 Bacteria 6064
156 Ga0395898_0003414 3300037466 Bacteria 17792
157 Ga0395898_0013730 3300037466 Bacteria 8330
158 Ga0395898_0143403 3300037466 Bacteria 2286
159 Ga0395898_0197139 3300037466 Bacteria 1923
160 Ga0395905_0007451 3300037471 Bacteria 10885
161 Ga0395905_0025828 3300037471 Bacteria 5537
162 Ga0395905_0159750 3300037471 Bacteria 2118
163 Ga0395901_0001816 3300038443 Bacteria 22049
164 Ga0395901_0003898 3300038443 Bacteria 15005
165 Ga0395901_0010631 3300038443 Bacteria 9326
166 Ga0395901_0035478 3300038443 Bacteria 5152
167 Ga0395901_0400265 3300038443 Bacteria 1411
168 Ga0436365_0043700 3300039437 Bacteria 9631
169 Ga0436363_0689332 3300039450 Bacteria 32747
170 Ga0451835_0514397 3300041492 Bacteria 1671
171 Ga0451839_0166529 3300041496 Bacteria 2232
172 Ga0466961_0058716 3300044693 Bacteria 2447
173 Ga0466963_0015094 3300044694 Bacteria 4776
174 Ga0466963_0023430 3300044694 Bacteria 3921
175 Ga0466963_0030652 3300044694 Bacteria 3472
176 Ga0466963_0037709 3300044694 Bacteria 3158
177 Ga0466963_0157540 3300044694 Bacteria 1579
178 Ga0466971_0020886 3300044719 Bacteria 2911
179 Ga0466959_0000356 3300045049 Bacteria 26996
180 Ga0466959_0043436 3300045049 Bacteria 3313
181 Ga0466958_0000216 3300045836 Bacteria 21669
182 Ga0466967_0038814 3300045976 Bacteria 4087
183 Ga0466967_0070098 3300045976 Bacteria 3135
184 Ga0466967_0113770 3300045976 Bacteria 2490
185 Ga0466967_0134539 3300045976 Bacteria 2298
186 Ga0466967_0194167 3300045976 Bacteria 1920
187 Ga0466967_0280755 3300045976 Bacteria 1598
188 Ga0495629_0033498 3300046459 Bacteria 3634
189 Ga0495634_0092087 3300046642 Bacteria 1967
190 Ga0495613_0148754 3300046689 Bacteria 1671
191 Ga0496101_0001385 3300048904 Bacteria 14524
192 Ga0496101_0027637 3300048904 Bacteria 3954
193 Ga0496102_0020975 3300048905 Bacteria 5777
194 Ga0496102_0104745 3300048905 Bacteria 2631
195 Ga0496105_0172461 3300048908 Bacteria 1773
196 Ga0496106_0005498 3300048909 Bacteria 9368
197 Ga0496106_0011033 3300048909 Bacteria 6679
198 Ga0496106_0043435 3300048909 Bacteria 3372
199 Ga0496107_0016122 3300048910 Bacteria 5243
200 Ga0496107_0036364 3300048910 Bacteria 3532
201 Ga0496107_0062521 3300048910 Bacteria 2697
202 Ga0496108_0007206 3300048911 Bacteria 9014
203 Ga0496108_0016490 3300048911 Bacteria 6029
204 Ga0496108_0032206 3300048911 Bacteria 4354
205 Ga0496108_0163981 3300048911 Bacteria 1921
206 Ga0496109_0088143 3300048912 Bacteria 2867
207 Ga0496109_0098190 3300048912 Bacteria 2715
208 Ga0496110_0046738 3300048913 Bacteria 3787
209 Ga0496111_0176706 3300048914 Bacteria 1587
210 Ga0496112_0029223 3300048915 Bacteria 5329
211 Ga0496113_0023659 3300048916 Bacteria 4357
212 Ga0496114_0011485 3300048917 Bacteria 7078
213 Ga0496115_0006516 3300048918 Bacteria 8559
214 Ga0496121_0035036 3300048924 Bacteria 4505
215 Ga0501031_0057155 3300049568 Bacteria 2542
216 Ga0501031_0063657 3300049568 Bacteria 2402
217 Ga0501031_0070533 3300049568 Bacteria 2276
218 Ga0501031_0175204 3300049568 Bacteria 1401
219 Ga0501033_0182734 3300049570 Bacteria 1503
220 Ga0501036_0003201 3300049572 Bacteria 13072
221 Ga0501036_0027950 3300049572 Bacteria 4769
222 Ga0501036_0046635 3300049572 Bacteria 3670
223 Ga0501038_0085982 3300049574 Bacteria 2643
224 Ga0501038_0253363 3300049574 Bacteria 1393
225 Ga0501039_0000813 3300049575 Bacteria 22530
226 Ga0501039_0050683 3300049575 Bacteria 3212
227 Ga0501039_0063427 3300049575 Bacteria 2863
228 Ga0501039_0139702 3300049575 Bacteria 1903
229 Ga0501039_0238882 3300049575 Bacteria 1429
230 Ga0501040_0011546 3300049576 Bacteria 5780
231 Ga0501040_0013292 3300049576 Bacteria 5414
232 Ga0501040_0035440 3300049576 Bacteria 3384
233 Ga0501040_0171981 3300049576 Unclassified 1534
234 Ga0501041_0004525 3300049577 Bacteria 8064
235 Ga0501041_0035086 3300049577 Bacteria 3039
236 Ga0501041_0128275 3300049577 Bacteria 1580
237 Ga0501042_0003499 3300049578 Bacteria 9867
238 Ga0501042_0024493 3300049578 Bacteria 4233
239 Ga0501042_0061769 3300049578 Bacteria 2676
240 Ga0501042_0084119 3300049578 Bacteria 2281
241 Ga0501046_0005021 3300049580 Bacteria 11877
242 Ga0501048_0002291 3300049582 Bacteria 14603
243 Ga0501048_0012375 3300049582 Bacteria 6346
244 Ga0501048_0028680 3300049582 Bacteria 4041
245 Ga0501048_0042301 3300049582 Bacteria 3263
246 Ga0501069_0019972 3300049585 Bacteria 3626
247 Ga0501071_0011000 3300049587 Bacteria 6076
248 Ga0501071_0044518 3300049587 Bacteria 3183
249 Ga0501071_0094049 3300049587 Bacteria 2204
250 Ga0501071_0267739 3300049587 Bacteria 1291
251 Ga0501072_0001289 3300049588 Bacteria 18747
252 Ga0501072_0004406 3300049588 Bacteria 10691
253 Ga0501072_0022737 3300049588 Bacteria 4865
254 Ga0501072_0023198 3300049588 Bacteria 4819
255 Ga0501072_0291043 3300049588 Unclassified 1298
256 Ga0501074_0058160 3300049590 Bacteria 2785
257 Ga0501074_0116201 3300049590 Bacteria 1914
258 Ga0501075_0006714 3300049591 Bacteria 7939
259 Ga0501075_0012242 3300049591 Bacteria 6090
260 Ga0501075_0023268 3300049591 Bacteria 4536
261 Ga0501075_0129921 3300049591 Bacteria 1919
262 Ga0501076_0015352 3300049592 Bacteria 5787
263 Ga0501076_0025818 3300049592 Bacteria 4548
264 Ga0501076_0034047 3300049592 Bacteria 3979
265 Ga0501076_0041541 3300049592 Bacteria 3619
266 Ga0501077_0011192 3300049593 Bacteria 5597
267 Ga0501077_0029392 3300049593 Bacteria 3494
268 Ga0501077_0039635 3300049593 Bacteria 3001
269 Ga0501079_0019831 3300049741 Bacteria 5138
270 Ga0501079_0037179 3300049741 Bacteria 3751
271 Ga0501079_0105718 3300049741 Bacteria 2184
272 Ga0501079_0182196 3300049741 Bacteria 1639
273 Ga0501079_0183232 3300049741 Bacteria 1634
274 Ga0501079_0203573 3300049741 Bacteria 1546
275 Ga0501080_0120469 3300049742 Bacteria 2432
276 Ga0501081_0001923 3300049743 Bacteria 12892
277 Ga0501081_0002681 3300049743 Bacteria 11250
278 Ga0501081_0014714 3300049743 Bacteria 5161
279 Ga0501081_0029861 3300049743 Bacteria 3686
280 Ga0501083_0030466 3300049744 Bacteria 3707
281 Ga0501083_0109059 3300049744 Bacteria 1821
282 Ga0501035_0021671 3300049822 Bacteria 5909
283 Ga0501035_0145364 3300049822 Bacteria 2060
284 Ga0501045_0024470 3300049824 Bacteria 4336
285 Ga0501045_0031564 3300049824 Bacteria 3837
286 Ga0501045_0039338 3300049824 Bacteria 3441
287 Ga0501045_0227859 3300049824 Bacteria 1387
288 nmdc:mga05p37_114437_c1 3300050507 Bacteria 3316
289 nmdc:mga08y16_105064_c1 3300050511 Bacteria 2940
290 nmdc:mga08y16_13481_c1 3300050511 Bacteria 8601
291 nmdc:mga08y16_47470_c1 3300050511 Bacteria 4494
292 Ga0501084_0010032 3300054114 Bacteria 7825
293 Ga0501084_0024240 3300054114 Bacteria 5059
294 Ga0501084_0028224 3300054114 Bacteria 4690
295 Ga0501084_0056589 3300054114 Bacteria 3281
296 Ga0501084_0068348 3300054114 Bacteria 2974
297 Ga0501084_0123893 3300054114 Bacteria 2174
298 Ga0501082_0006519 3300060353 Bacteria 10120
299 Ga0501082_0012467 3300060353 Bacteria 7304
300 Ga0501082_0156369 3300060353 Bacteria 1981
301 Ga0501082_0240821 3300060353 Bacteria 1574
302 Ga0501082_0308606 3300060353 Bacteria 1378
303 Ga0466962_0026320 3300061719 Bacteria 2793
304 Ga0466962_0062373 3300061719 Bacteria 1780
305 Ga0530510_0070051 3300061734 Bacteria 2545
306 Ga0530510_0112165 3300061734 Bacteria 1998
307 Ga0530510_0157062 3300061734 Bacteria 1681
308 Ga0081538_10004187
309 Ga0070683_100022724
310 Ga0070683_100038402
311 Ga0070683_100257838
312 Ga0070680_100004355
313 Ga0070682_100012420
314 Ga0070682_100049228
315 Ga0070682_100189281
316 Ga0068868_100129701
317 Ga0070660_100013711
318 Ga0070689_100104821
319 Ga0070668_100083638
320 Ga0070668_100212990
321 Ga0070671_100256369
322 Ga0070659_100013609
323 Ga0070659_100048898
324 Ga0070659_100059603
325 Ga0070709_10166637
326 Ga0070714_100022982
327 Ga0070713_100128202
328 Ga0070694_100203797
329 Ga0070708_100027221
330 Ga0070663_100256029
331 Ga0070678_100036850
332 Ga0070662_100023098
333 Ga0070681_10036757
334 Ga0070698_100031437
335 Ga0070679_100014336
336 Ga0070684_100018903
337 Ga0070684_100037406
338 Ga0070684_100357598
339 Ga0070686_100044193
340 Ga0070696_100059440
341 Ga0070665_100096706
342 Ga0070704_100030730
343 Ga0070664_100094775
344 Ga0068856_100002734
345 Ga0068856_100137331
346 Ga0070702_100017016
347 Ga0070702_100079170
348 Ga0068852_100003529
349 Ga0068852_100019943
350 Ga0068866_10061739
351 Ga0068861_100103571
352 Ga0068861_100182310
353 Ga0068860_100066406
354 Ga0081455_10011260
355 Ga0081455_10056596
356 Ga0081455_10076963
357 Ga0081538_10002539
358 Ga0081538_10004890
359 Ga0081538_10009003
360 Ga0081538_10024002
361 Ga0081538_10036317
362 Ga0081538_10057333
363 Ga0081538_10071718
364 Ga0081538_10083876
365 Ga0081540_1001943
366 Ga0081540_1006102
367 Ga0081539_10001045
368 Ga0070717_10005654
369 Ga0070717_10018875
370 Ga0070717_10078099
371 Ga0070712_100006959
372 Ga0075428_100010009
373 Ga0068865_100028247
374 Ga0075435_100278486
375 Ga0105240_10131376
376 Ga0111539_10008207
377 Ga0111539_10036113
378 Ga0111539_10128528
379 Ga0111539_10226518
380 Ga0105245_10005709
381 Ga0105245_10136437
382 Ga0105245_10229432
383 Ga0105247_10097510
384 Ga0114129_10053451
385 Ga0105243_10270985
386 Ga0105243_10299706
387 Ga0105242_10373990
388 Ga0105237_10400294
389 Ga0105239_10013106
390 Ga0105246_10014791
391 Ga0157370_10039662
392 Ga0157372_10006405
393 Ga0157372_10048251
394 Ga0157375_10028753
395 Ga0157375_10609042
396 Ga0163163_10040476
397 Ga0157377_10004459
398 Ga0157376_10080818
399 Ga0206356_11795030
400 Ga0206353_10369188
401 Ga0207688_10002962
402 Ga0207688_10011869
403 Ga0207645_10129053
404 Ga0207684_10174540
405 Ga0207693_10010620
406 Ga0207660_10070428
407 Ga0207662_10047790
408 Ga0207657_10033988
409 Ga0207657_10140998
410 Ga0207649_10101978
411 Ga0207694_10050026
412 Ga0207687_10119118
413 Ga0207687_10314610
414 Ga0207664_10040672
415 Ga0207706_10056019
416 Ga0207706_10088366
417 Ga0207709_10088054
418 Ga0207709_10098237
419 Ga0207709_10187578
420 Ga0207670_10047079
421 Ga0207704_10003128
422 Ga0207704_10066508
423 Ga0207661_10064804
424 Ga0207661_10123970
425 Ga0207679_10085525
426 Ga0207679_10172392
427 Ga0207668_10149103
428 Ga0207668_10232298
429 Ga0207677_10198653
430 Ga0207639_10090666
431 Ga0207678_10016059
432 Ga0207708_10001179
433 Ga0207708_10005998
434 Ga0207708_10147459
435 Ga0207702_10019494
436 Ga0207702_10124951
437 Ga0207702_10136692
438 Ga0207648_10015342
439 Ga0207674_10102032
440 Ga0207675_100056862
441 Ga0207675_100098465
442 Ga0207675_100108532
443 Ga0207675_100113187
444 Ga0207698_10010798
445 Ga0207698_10110634
446 Ga0207698_10226100
447 Ga0207698_10255262
448 Ga0207428_10003304
449 Ga0268264_10025401
450 Ga0307405_10027172
451 Ga0307410_10245247
452 Ga0307412_10036929
453 Ga0307409_100017210
454 Ga0307416_100026852
455 Ga0307416_100035051
456 Ga0307414_10125854
457 Ga0307411_10329992
458 Ga0395899_0052109
459 Ga0395899_0105617
460 Ga0395900_0001398
461 Ga0395900_0009649
462 Ga0395900_0025404
463 Ga0395898_0003414
464 Ga0395898_0013730
465 Ga0395898_0143403
466 Ga0395898_0197139
467 Ga0395905_0007451
468 Ga0395905_0025828
469 Ga0395905_0159750
470 Ga0395901_0001816
471 Ga0395901_0003898
472 Ga0395901_0010631
473 Ga0395901_0035478
474 Ga0395901_0400265
475 Ga0436365_0043700
476 Ga0436363_0689332
477 Ga0451835_0514397
478 Ga0451839_0166529
479 Ga0466961_0058716
480 Ga0466963_0015094
481 Ga0466963_0023430
482 Ga0466963_0030652
483 Ga0466963_0037709
484 Ga0466963_0157540
485 Ga0466971_0020886
486 Ga0466959_0000356
487 Ga0466959_0043436
488 Ga0466958_0000216
489 Ga0466967_0038814
490 Ga0466967_0070098
491 Ga0466967_0113770
492 Ga0466967_0134539
493 Ga0466967_0194167
494 Ga0466967_0280755
495 Ga0495629_0033498
496 Ga0495634_0092087
497 Ga0495613_0148754
498 Ga0496101_0001385
499 Ga0496101_0027637
500 Ga0496102_0020975
501 Ga0496102_0104745
502 Ga0496105_0172461
503 Ga0496106_0005498
504 Ga0496106_0011033
505 Ga0496106_0043435
506 Ga0496107_0016122
507 Ga0496107_0036364
508 Ga0496107_0062521
509 Ga0496108_0007206
510 Ga0496108_0016490
511 Ga0496108_0032206
512 Ga0496108_0163981
513 Ga0496109_0088143
514 Ga0496109_0098190
515 Ga0496110_0046738
516 Ga0496111_0176706
517 Ga0496112_0029223
518 Ga0496113_0023659
519 Ga0496114_0011485
520 Ga0496115_0006516
521 Ga0496121_0035036
522 Ga0501031_0057155
523 Ga0501031_0063657
524 Ga0501031_0070533
525 Ga0501031_0175204
526 Ga0501033_0182734
527 Ga0501036_0003201
528 Ga0501036_0027950
529 Ga0501036_0046635
530 Ga0501038_0085982
531 Ga0501038_0253363
532 Ga0501039_0000813
533 Ga0501039_0050683
534 Ga0501039_0063427
535 Ga0501039_0139702
536 Ga0501039_0238882
537 Ga0501040_0011546
538 Ga0501040_0013292
539 Ga0501040_0035440
540 Ga0501040_0171981
541 Ga0501041_0004525
542 Ga0501041_0035086
543 Ga0501041_0128275
544 Ga0501042_0003499
545 Ga0501042_0024493
546 Ga0501042_0061769
547 Ga0501042_0084119
548 Ga0501046_0005021
549 Ga0501048_0002291
550 Ga0501048_0012375
551 Ga0501048_0028680
552 Ga0501048_0042301
553 Ga0501069_0019972
554 Ga0501071_0011000
555 Ga0501071_0044518
556 Ga0501071_0094049
557 Ga0501071_0267739
558 Ga0501072_0001289
559 Ga0501072_0004406
560 Ga0501072_0022737
561 Ga0501072_0023198
562 Ga0501072_0291043
563 Ga0501074_0058160
564 Ga0501074_0116201
565 Ga0501075_0006714
566 Ga0501075_0012242
567 Ga0501075_0023268
568 Ga0501075_0129921
569 Ga0501076_0015352
570 Ga0501076_0025818
571 Ga0501076_0034047
572 Ga0501076_0041541
573 Ga0501077_0011192
574 Ga0501077_0029392
575 Ga0501077_0039635
576 Ga0501079_0019831
577 Ga0501079_0037179
578 Ga0501079_0105718
579 Ga0501079_0182196
580 Ga0501079_0183232
581 Ga0501079_0203573
582 Ga0501080_0120469
583 Ga0501081_0001923
584 Ga0501081_0002681
585 Ga0501081_0014714
586 Ga0501081_0029861
587 Ga0501083_0030466
588 Ga0501083_0109059
589 Ga0501035_0021671
590 Ga0501035_0145364
591 Ga0501045_0024470
592 Ga0501045_0031564
593 Ga0501045_0039338
594 Ga0501045_0227859
595 nmdc:mga05p37_114437_c1
596 nmdc:mga08y16_105064_c1
597 nmdc:mga08y16_13481_c1
598 nmdc:mga08y16_47470_c1
599 Ga0501084_0010032
600 Ga0501084_0024240
601 Ga0501084_0028224
602 Ga0501084_0056589
603 Ga0501084_0068348
604 Ga0501084_0123893
605 Ga0501082_0006519
606 Ga0501082_0012467
607 Ga0501082_0156369
608 Ga0501082_0240821
609 Ga0501082_0308606
610 Ga0466962_0026320
611 Ga0466962_0062373
612 Ga0530510_0070051
613 Ga0530510_0112165
614 Ga0530510_0157062

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07730

HisKA_3

Histidine kinase

195

262

0.98

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

299

392

0.92

PF01590

GAF

GAF domain

40

178

0.88

PF13185

GAF_2

GAF domain

38

179

0.85

PF13581

HATPase_c_2

Histidine kinase-like ATPase domain

268

388

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
2y8h-assembly1.cif.gz_B structure of the first gaf domain e87g mutant of mycobacterium tuberculosis doss 0.9279 25 167
4yof-assembly1.cif.gz_A doss gafa domain reduced nitric oxide bound crystal structure 0.9279 25 164
4gt8-assembly1.cif.gz_A crystal structure of the catalytic and atp-binding domain from vras in complex with adp 0.927 252 380
2w3h-assembly1.cif.gz_B cyanide bound structure of the first gaf domain of mycobacterium tuberculosis doss 0.9257 23 166
2y79-assembly1.cif.gz_B structure of the first gaf domain e87a mutant of mycobacterium tuberculosis doss 0.9239 23 169
ID Description Score Start End Superfamily
4gt8A00 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.927 252 380 3.30.565.10
4ynrA00 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;GAF domain 0.9202 25 164 3.30.450.40
af_Q2FVM6_212_344_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9072 247 378 3.30.565.10
af_O53857_291_425_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.8967 247 380 3.30.565.10
4ynrA00 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;GAF domain 0.889 25 164 3.30.450.40
ID Description Score Start End GO Terms
AF-A0A7C5D303-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9105 243 379 GO:0000160
GO:0016301
AF-A0A4V2NHS0-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9009 247 378 GO:0000160
GO:0016301
AF-A0A3N6AEF3-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8811 269 379 GO:0000160
GO:0005886
GO:0016301
AF-A0A660WU99-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8762 239 376 GO:0000160
GO:0016301
AF-A0A6L7MML0-F1-model_v4 Histidine kinase/HSP90-like ATPase domain-containing protein 0.872 243 378

Map