F399036

General Info

Members Datasets Scaffolds Average Seq Length
307 179 614 295

Family's Representative Sequence

Representative Sequence 3300005434|Ga0070709_10073905|Ga0070709_100739052
Length 319
Sequence VSSNLVQLVGQVPDLPSHGAGREPAPRPRLPEWARKSRTHFQSLNQLKSGLRQLNLHTVCEEARCPNIHECFHRGAATFMILGDRCTRGCGFCSVQKLNPNKHDVRLDPAEPANVARMAREMKLKYVVITSVNRDDLPDGGSRHFAETVREVRRNLPDARVEVLTPDFCGDLDAVARVLEAGPHVFNHNMETVPRLYARVRPQANYRQSLNVLRFARERAAADVLVKSGFMVGLGEQPEEVRQLLADLRESHADVATIGQYLQPTRRNLPVVEFVTPEQFDEYREYGLSLGFKMVFSGPLVRSSYMADMVSEEAHRQSC

Samples

Sample ID Description Type Environment
1 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
56 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
87 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
88 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
89 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
90 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
91 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
92 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
93 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
94 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
95 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
96 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
97 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
98 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
99 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
100 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
101 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
102 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
103 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
104 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
105 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
110 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
111 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
112 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
113 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
114 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
115 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
116 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
117 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
118 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
119 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
120 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
121 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
122 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
123 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
124 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
125 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
126 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
127 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
128 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
129 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
130 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
131 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
132 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
133 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
134 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
135 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
136 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
137 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
138 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
139 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
140 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
141 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
142 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
143 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
144 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
145 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
146 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
147 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
148 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
149 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
150 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
151 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
152 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
164 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
165 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
166 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
167 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
168 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
169 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
170 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
171 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
172 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
173 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
174 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
175 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
176 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
179 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.3
Rhizosphere 94.46
Stem 0
Stem Tuber 0
Unclassified 13.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070709_10073905 3300005434 Bacteria 2208
2 Ga0070658_10239301 3300005327 Unclassified 1538
3 Ga0070683_100106082 3300005329 Bacteria 2648
4 Ga0070670_100300450 3300005331 Unclassified 1404
5 Ga0070680_100010305 3300005336 Bacteria 7205
6 Ga0070680_100181799 3300005336 Unclassified 1771
7 Ga0070660_100059031 3300005339 Bacteria 2975
8 Ga0070689_100105017 3300005340 Bacteria 2240
9 Ga0070691_10007181 3300005341 Bacteria 5100
10 Ga0070687_100201413 3300005343 Archaea 1206
11 Ga0070669_100602520 3300005353 Bacteria 920
12 Ga0070673_100024018 3300005364 Bacteria 4462
13 Ga0070688_100300979 3300005365 Bacteria 1159
14 Ga0070659_100099787 3300005366 Unclassified 2336
15 Ga0070711_100105328 3300005439 Bacteria 2060
16 Ga0070711_100192056 3300005439 Bacteria 1570
17 Ga0070662_100186861 3300005457 Unclassified 1636
18 Ga0070681_10011948 3300005458 Bacteria 8609
19 Ga0070679_100019181 3300005530 Bacteria 6646
20 Ga0070679_100348847 3300005530 Unclassified 1428
21 Ga0070684_100014048 3300005535 Bacteria 6475
22 Ga0070684_100367902 3300005535 Unclassified 1323
23 Ga0070684_100400614 3300005535 Unclassified 1265
24 Ga0068853_100053549 3300005539 Bacteria 3475
25 Ga0070672_100186930 3300005543 Unclassified 1728
26 Ga0070665_100005221 3300005548 Bacteria 13438
27 Ga0068855_100007317 3300005563 Bacteria 13375
28 Ga0068855_100043104 3300005563 Bacteria 5346
29 Ga0068855_100069162 3300005563 Bacteria 4109
30 Ga0068857_100024222 3300005577 Bacteria 5342
31 Ga0068856_100009711 3300005614 Bacteria 9346
32 Ga0068856_100012582 3300005614 Bacteria 8190
33 Ga0068856_100082147 3300005614 Unclassified 3198
34 Ga0068852_100007075 3300005616 Bacteria 8172
35 Ga0068852_100044695 3300005616 Bacteria 3764
36 Ga0068859_100094229 3300005617 Bacteria 3046
37 Ga0068859_100201364 3300005617 Bacteria 2076
38 Ga0070717_10016669 3300006028 Bacteria 5701
39 Ga0070717_10039977 3300006028 Bacteria 3818
40 Ga0070717_10059316 3300006028 Bacteria 3166
41 Ga0097621_100092505 3300006237 Unclassified 2533
42 Ga0068871_100134770 3300006358 Bacteria 2097
43 Ga0068865_100166440 3300006881 Bacteria 1686
44 Ga0097620_100094228 3300006931 Bacteria 3046
45 Ga0097620_100201365 3300006931 Bacteria 2076
46 Ga0105240_10000159 3300009093 Bacteria 137832
47 Ga0105240_10000512 3300009093 Bacteria 71437
48 Ga0105240_10007693 3300009093 Bacteria 15594
49 Ga0105240_10011624 3300009093 Bacteria 12244
50 Ga0105240_10023555 3300009093 Bacteria 8137
51 Ga0105240_10038563 3300009093 Bacteria 6127
52 Ga0105240_10092690 3300009093 Bacteria 3688
53 Ga0105240_10200798 3300009093 Bacteria 2337
54 Ga0105245_10021536 3300009098 Bacteria 5657
55 Ga0105245_10180990 3300009098 Unclassified 2014
56 Ga0105247_10355466 3300009101 Bacteria 1031
57 Ga0105241_10009260 3300009174 Bacteria 7242
58 Ga0105242_10268431 3300009176 Unclassified 1544
59 Ga0105248_10027960 3300009177 Bacteria 6280
60 Ga0105248_10034895 3300009177 Bacteria 5629
61 Ga0105237_10001201 3300009545 Bacteria 34695
62 Ga0105237_10023578 3300009545 Bacteria 6304
63 Ga0105237_10026229 3300009545 Bacteria 5956
64 Ga0105237_10033423 3300009545 Bacteria 5210
65 Ga0105237_10161919 3300009545 Unclassified 2236
66 Ga0105238_10007085 3300009551 Bacteria 11218
67 Ga0105238_10013005 3300009551 Bacteria 8400
68 Ga0105238_10420767 3300009551 Unclassified 1331
69 Ga0105249_10003907 3300009553 Bacteria 12876
70 Ga0105239_10007051 3300010375 Bacteria 12932
71 Ga0105239_10010662 3300010375 Bacteria 10279
72 Ga0105246_10128660 3300011119 Bacteria 1888
73 Ga0157373_10134737 3300013100 Unclassified 1737
74 Ga0157371_10026347 3300013102 Unclassified 4228
75 Ga0157370_10023438 3300013104 Bacteria 6127
76 Ga0157370_10136142 3300013104 Bacteria 2289
77 Ga0157370_10266927 3300013104 Unclassified 1581
78 Ga0157370_10324895 3300013104 Bacteria 1419
79 Ga0157369_10002913 3300013105 Bacteria 20465
80 Ga0157369_10007209 3300013105 Bacteria 12814
81 Ga0157369_10115808 3300013105 Bacteria 2846
82 Ga0157369_10506575 3300013105 Bacteria 1249
83 Ga0157374_10029999 3300013296 Bacteria 4934
84 Ga0157374_10046847 3300013296 Bacteria 4006
85 Ga0157374_10476274 3300013296 Bacteria 1251
86 Ga0157378_10474549 3300013297 Unclassified 1245
87 Ga0163162_10314186 3300013306 Unclassified 1699
88 Ga0163162_10534880 3300013306 Bacteria 1301
89 Ga0157372_10020667 3300013307 Bacteria 7105
90 Ga0157372_10245605 3300013307 Bacteria 2077
91 Ga0157375_10053404 3300013308 Bacteria 3976
92 Ga0163163_10068260 3300014325 Bacteria 3537
93 Ga0163163_10090549 3300014325 Bacteria 3072
94 Ga0163163_10093017 3300014325 Bacteria 3031
95 Ga0163163_10217350 3300014325 Unclassified 1960
96 Ga0157379_10055041 3300014968 Unclassified 3555
97 Ga0157379_10151519 3300014968 Bacteria 2091
98 Ga0157376_10051710 3300014969 Bacteria 3413
99 Ga0213872_10000164 3300021361 Bacteria 60317
100 Ga0213875_10000013 3300021388 Bacteria 305595
101 Ga0213875_10004209 3300021388 Bacteria 7948
102 Ga0207705_10008992 3300025909 Bacteria 7277
103 Ga0207684_10176866 3300025910 Bacteria 1840
104 Ga0207654_10016599 3300025911 Bacteria 3836
105 Ga0207707_10004380 3300025912 Bacteria 12476
106 Ga0207695_10001027 3300025913 Bacteria 49104
107 Ga0207695_10001695 3300025913 Bacteria 35368
108 Ga0207695_10002643 3300025913 Bacteria 26197
109 Ga0207695_10008883 3300025913 Bacteria 12510
110 Ga0207695_10010331 3300025913 Bacteria 11429
111 Ga0207695_10070699 3300025913 Bacteria 3566
112 Ga0207695_10086586 3300025913 Unclassified 3159
113 Ga0207671_10009311 3300025914 Bacteria 8223
114 Ga0207671_10014055 3300025914 Bacteria 6346
115 Ga0207671_10036354 3300025914 Bacteria 3652
116 Ga0207671_10083434 3300025914 Bacteria 2399
117 Ga0207671_10243215 3300025914 Bacteria 1414
118 Ga0207663_10090752 3300025916 Bacteria 2026
119 Ga0207660_10035169 3300025917 Bacteria 3476
120 Ga0207660_10061209 3300025917 Bacteria 2709
121 Ga0207660_10065161 3300025917 Unclassified 2632
122 Ga0207657_10170544 3300025919 Unclassified 1763
123 Ga0207652_10003359 3300025921 Bacteria 13215
124 Ga0207694_10000632 3300025924 Bacteria 31940
125 Ga0207694_10006730 3300025924 Bacteria 8729
126 Ga0207687_10001416 3300025927 Bacteria 16398
127 Ga0207687_10009378 3300025927 Bacteria 6401
128 Ga0207700_10034940 3300025928 Bacteria 3615
129 Ga0207700_10471510 3300025928 Bacteria 1108
130 Ga0207664_10033446 3300025929 Bacteria 3950
131 Ga0207644_10047315 3300025931 Bacteria 3069
132 Ga0207690_10028855 3300025932 Bacteria 3520
133 Ga0207690_10224949 3300025932 Bacteria 1438
134 Ga0207706_10221620 3300025933 Unclassified 1656
135 Ga0207670_10190664 3300025936 Bacteria 1551
136 Ga0207691_10314496 3300025940 Bacteria 1343
137 Ga0207711_10001448 3300025941 Bacteria 22174
138 Ga0207661_10126734 3300025944 Bacteria 2181
139 Ga0207661_10202229 3300025944 Unclassified 1747
140 Ga0207667_10000682 3300025949 Bacteria 44026
141 Ga0207667_10000938 3300025949 Bacteria 37175
142 Ga0207667_10068394 3300025949 Unclassified 3699
143 Ga0207667_10082616 3300025949 Bacteria 3327
144 Ga0207667_10288570 3300025949 Unclassified 1677
145 Ga0207639_10030581 3300026041 Bacteria 3950
146 Ga0207702_10010506 3300026078 Bacteria 7744
147 Ga0207702_10039396 3300026078 Bacteria 3959
148 Ga0207702_10052858 3300026078 Bacteria 3439
149 Ga0207702_10055604 3300026078 Unclassified 3357
150 Ga0207702_10092867 3300026078 Unclassified 2646
151 Ga0207641_10099537 3300026088 Bacteria 2558
152 Ga0207674_10004826 3300026116 Bacteria 16148
153 Ga0207683_10253111 3300026121 Unclassified 1607
154 Ga0207698_10007728 3300026142 Bacteria 6747
155 Ga0207698_10056788 3300026142 Bacteria 3024
156 Ga0268266_10016262 3300028379 Bacteria 6359
157 Ga0265323_10003491 3300028653 Bacteria 6933
158 Ga0265336_10015793 3300028666 Bacteria 2477
159 Ga0265332_10029085 3300031238 Bacteria 2417
160 Ga0265328_10006858 3300031239 Bacteria 4786
161 Ga0265320_10002434 3300031240 Bacteria 12961
162 Ga0265325_10021359 3300031241 Bacteria 3557
163 Ga0265325_10061570 3300031241 Bacteria 1903
164 Ga0265325_10096028 3300031241 Bacteria 1456
165 Ga0265329_10030389 3300031242 Bacteria 1760
166 Ga0265340_10005776 3300031247 Bacteria 6843
167 Ga0265339_10072321 3300031249 Bacteria 1835
168 Ga0265331_10005411 3300031250 Bacteria 7714
169 Ga0265331_10063497 3300031250 Unclassified 1740
170 Ga0265316_10006594 3300031344 Bacteria 11065
171 Ga0265316_10007729 3300031344 Bacteria 10074
172 Ga0265316_10021889 3300031344 Bacteria 5404
173 Ga0265316_10056456 3300031344 Bacteria 3066
174 Ga0265316_10090655 3300031344 Bacteria 2333
175 Ga0265316_10134042 3300031344 Bacteria 1864
176 Ga0265314_10016044 3300031711 Bacteria 5931
177 Ga0265314_10033512 3300031711 Bacteria 3764
178 Ga0265314_10071511 3300031711 Bacteria 2321
179 Ga0265342_10010038 3300031712 Bacteria 6606
180 Ga0265342_10037659 3300031712 Bacteria 2948
181 Ga0265342_10081451 3300031712 Bacteria 1869
182 Ga0373923_0016912 3300035111 Bacteria 2780
183 Ga0373954_0126790 3300035118 Bacteria 1241
184 Ga0373943_0162240 3300035170 Bacteria 1218
185 Ga0373935_0070048 3300035692 Bacteria 2260
186 Ga0373935_0070181 3300035692 Bacteria 2258
187 Ga0373927_0051845 3300035695 Bacteria 2654
188 Ga0373927_0080750 3300035695 Bacteria 2107
189 Ga0373927_0266250 3300035695 Bacteria 1127
190 Ga0373933_0058596 3300035724 Bacteria 2317
191 Ga0373947_0039755 3300035725 Bacteria 2800
192 Ga0373947_0061576 3300035725 Bacteria 2281
193 Ga0373937_0013948 3300036401 Bacteria 7085
194 Ga0373937_0069075 3300036401 Bacteria 3257
195 Ga0373937_0247301 3300036401 Bacteria 1681
196 Ga0373937_0293548 3300036401 Bacteria 1536
197 Ga0373937_0333812 3300036401 Bacteria 1435
198 Ga0373925_0005499 3300037068 Bacteria 9428
199 Ga0373925_0054091 3300037068 Bacteria 3002
200 Ga0373925_0153237 3300037068 Bacteria 1811
201 Ga0395898_0209815 3300037466 Bacteria 1858
202 Ga0436364_0043824 3300037853 Unclassified 3203
203 Ga0436364_0417917 3300037853 Bacteria 2385
204 Ga0436364_0455971 3300037853 Unclassified 2007
205 Ga0436364_0527650 3300037853 Bacteria 2884
206 Ga0436364_0794765 3300037853 Bacteria 162685
207 Ga0436364_1369674 3300037853 Unclassified 1297
208 Ga0436365_0165286 3300039437 Bacteria 3552
209 Ga0436365_0233943 3300039437 Bacteria 8017
210 Ga0436361_0167314 3300039447 Bacteria 59578
211 Ga0436363_0669228 3300039450 Bacteria 1266
212 Ga0436363_0808725 3300039450 Bacteria 1247
213 Ga0436363_1063828 3300039450 Bacteria 1197
214 Ga0436362_1214423 3300039453 Bacteria 1731
215 Ga0466963_0110251 3300044694 Unclassified 1889
216 Ga0453684_0374804 3300044712 Bacteria 1599
217 Ga0466959_0057126 3300045049 Bacteria 2846
218 Ga0451576_0329005 3300045051 Bacteria 1599
219 Ga0466967_0111358 3300045976 Bacteria 2516
220 Ga0495629_0161836 3300046459 Bacteria 1555
221 Ga0495651_0052484 3300046462 Bacteria 3140
222 Ga0495651_0054221 3300046462 Bacteria 3084
223 Ga0495651_0072682 3300046462 Bacteria 2612
224 Ga0495580_0002695 3300046472 Bacteria 15362
225 Ga0495580_0002762 3300046472 Bacteria 15124
226 Ga0495580_0019619 3300046472 Bacteria 5021
227 Ga0495580_0214302 3300046472 Bacteria 1324
228 Ga0495580_0291584 3300046472 Bacteria 1112
229 Ga0495582_0018546 3300046473 Bacteria 3804
230 Ga0495582_0042087 3300046473 Bacteria 2517
231 Ga0495662_0024685 3300046476 Bacteria 2901
232 Ga0495664_0010524 3300046477 Bacteria 5192
233 Ga0495664_0046797 3300046477 Bacteria 2567
234 Ga0495594_0064030 3300046499 Bacteria 2038
235 Ga0495618_0126776 3300046514 Bacteria 1634
236 Ga0495628_0107441 3300046516 Bacteria 2148
237 Ga0495628_0108390 3300046516 Unclassified 2138
238 Ga0495652_0104273 3300046529 Bacteria 2294
239 Ga0495652_0244518 3300046529 Bacteria 1333
240 Ga0495665_0027748 3300046531 Bacteria 3038
241 Ga0495665_0059536 3300046531 Bacteria 2016
242 Ga0495640_0046559 3300046533 Bacteria 3005
243 Ga0495587_0084661 3300046536 Bacteria 1836
244 Ga0495667_0044607 3300046559 Bacteria 2936
245 Ga0495667_0064141 3300046559 Bacteria 2403
246 Ga0495634_0069226 3300046642 Bacteria 2329
247 Ga0495635_0192876 3300046663 Bacteria 1383
248 Ga0495635_0270120 3300046663 Unclassified 1144
249 Ga0495588_0070040 3300046674 Bacteria 1823
250 Ga0495657_0102034 3300046675 Bacteria 1827
251 Ga0495599_0004893 3300046678 Bacteria 7965
252 Ga0495623_0056929 3300046679 Bacteria 2460
253 Ga0495623_0071220 3300046679 Bacteria 2164
254 Ga0495658_0170993 3300046683 Bacteria 1345
255 Ga0495613_0142367 3300046689 Bacteria 1713
256 Ga0495613_0164059 3300046689 Bacteria 1579
257 Ga0495600_0046891 3300046809 Unclassified 2819
258 Ga0495600_0059080 3300046809 Bacteria 2505
259 Ga0495581_0056298 3300047315 Bacteria 2270
260 Ga0495604_0042691 3300047317 Bacteria 3553
261 Ga0495604_0109528 3300047317 Bacteria 2016
262 Ga0495674_0035898 3300047319 Bacteria 4468
263 Ga0495674_0037252 3300047319 Bacteria 4370
264 Ga0495674_0120571 3300047319 Bacteria 2215
265 Ga0495674_0217785 3300047319 Bacteria 1579
266 Ga0495674_0338019 3300047319 Bacteria 1224
267 Ga0495680_0035294 3300047322 Bacteria 4029
268 Ga0495680_0098584 3300047322 Bacteria 2181
269 Ga0495675_0098415 3300047444 Bacteria 1832
270 Ga0495684_0003644 3300047471 Bacteria 11995
271 Ga0495684_0008940 3300047471 Bacteria 7738
272 Ga0495684_0175003 3300047471 Bacteria 1593
273 Ga0495602_0020069 3300048088 Bacteria 6612
274 Ga0496104_0359580 3300048907 Bacteria 1368
275 Ga0496112_0017855 3300048915 Bacteria 6678
276 Ga0496112_0303564 3300048915 Bacteria 1542
277 Ga0496115_0095083 3300048918 Bacteria 2439
278 Ga0501031_0047321 3300049568 Bacteria 2804
279 Ga0501032_0006794 3300049569 Bacteria 8395
280 Ga0501033_0003571 3300049570 Bacteria 12724
281 Ga0501034_0037336 3300049571 Bacteria 4918
282 Ga0501034_0104700 3300049571 Bacteria 2823
283 Ga0501036_0000295 3300049572 Bacteria 34600
284 Ga0501037_0012282 3300049573 Bacteria 6303
285 Ga0501038_0001014 3300049574 Bacteria 25267
286 Ga0501039_0004528 3300049575 Bacteria 10497
287 Ga0501040_0093442 3300049576 Bacteria 2092
288 Ga0501043_0002917 3300049579 Bacteria 14273
289 Ga0501047_0102890 3300049581 Bacteria 2735
290 Ga0501067_0000758 3300049583 Bacteria 17370
291 Ga0501068_0001097 3300049584 Bacteria 14341
292 Ga0501069_0000735 3300049585 Bacteria 15273
293 Ga0501070_0039352 3300049586 Bacteria 3944
294 Ga0501072_0003952 3300049588 Bacteria 11214
295 Ga0501073_0016186 3300049589 Bacteria 5403
296 Ga0501074_0004689 3300049590 Bacteria 9791
297 Ga0501076_0036804 3300049592 Bacteria 3836
298 Ga0501077_0003719 3300049593 Bacteria 9177
299 Ga0501202_022114 3300049652 Bacteria 1276
300 Ga0501079_0001799 3300049741 Bacteria 15314
301 Ga0501080_0000017 3300049742 Bacteria 96079
302 Ga0501083_0023708 3300049744 Bacteria 4255
303 Ga0501035_0363331 3300049822 Bacteria 1209
304 Ga0501044_0001767 3300049823 Bacteria 25271
305 Ga0501044_0441167 3300049823 Bacteria 1209
306 Ga0501045_0289427 3300049824 Bacteria 1219
307 Ga0501084_0116154 3300054114 Bacteria 2249
308 Ga0070709_10073905
309 Ga0070658_10239301
310 Ga0070683_100106082
311 Ga0070670_100300450
312 Ga0070680_100010305
313 Ga0070680_100181799
314 Ga0070660_100059031
315 Ga0070689_100105017
316 Ga0070691_10007181
317 Ga0070687_100201413
318 Ga0070669_100602520
319 Ga0070673_100024018
320 Ga0070688_100300979
321 Ga0070659_100099787
322 Ga0070711_100105328
323 Ga0070711_100192056
324 Ga0070662_100186861
325 Ga0070681_10011948
326 Ga0070679_100019181
327 Ga0070679_100348847
328 Ga0070684_100014048
329 Ga0070684_100367902
330 Ga0070684_100400614
331 Ga0068853_100053549
332 Ga0070672_100186930
333 Ga0070665_100005221
334 Ga0068855_100007317
335 Ga0068855_100043104
336 Ga0068855_100069162
337 Ga0068857_100024222
338 Ga0068856_100009711
339 Ga0068856_100012582
340 Ga0068856_100082147
341 Ga0068852_100007075
342 Ga0068852_100044695
343 Ga0068859_100094229
344 Ga0068859_100201364
345 Ga0070717_10016669
346 Ga0070717_10039977
347 Ga0070717_10059316
348 Ga0097621_100092505
349 Ga0068871_100134770
350 Ga0068865_100166440
351 Ga0097620_100094228
352 Ga0097620_100201365
353 Ga0105240_10000159
354 Ga0105240_10000512
355 Ga0105240_10007693
356 Ga0105240_10011624
357 Ga0105240_10023555
358 Ga0105240_10038563
359 Ga0105240_10092690
360 Ga0105240_10200798
361 Ga0105245_10021536
362 Ga0105245_10180990
363 Ga0105247_10355466
364 Ga0105241_10009260
365 Ga0105242_10268431
366 Ga0105248_10027960
367 Ga0105248_10034895
368 Ga0105237_10001201
369 Ga0105237_10023578
370 Ga0105237_10026229
371 Ga0105237_10033423
372 Ga0105237_10161919
373 Ga0105238_10007085
374 Ga0105238_10013005
375 Ga0105238_10420767
376 Ga0105249_10003907
377 Ga0105239_10007051
378 Ga0105239_10010662
379 Ga0105246_10128660
380 Ga0157373_10134737
381 Ga0157371_10026347
382 Ga0157370_10023438
383 Ga0157370_10136142
384 Ga0157370_10266927
385 Ga0157370_10324895
386 Ga0157369_10002913
387 Ga0157369_10007209
388 Ga0157369_10115808
389 Ga0157369_10506575
390 Ga0157374_10029999
391 Ga0157374_10046847
392 Ga0157374_10476274
393 Ga0157378_10474549
394 Ga0163162_10314186
395 Ga0163162_10534880
396 Ga0157372_10020667
397 Ga0157372_10245605
398 Ga0157375_10053404
399 Ga0163163_10068260
400 Ga0163163_10090549
401 Ga0163163_10093017
402 Ga0163163_10217350
403 Ga0157379_10055041
404 Ga0157379_10151519
405 Ga0157376_10051710
406 Ga0213872_10000164
407 Ga0213875_10000013
408 Ga0213875_10004209
409 Ga0207705_10008992
410 Ga0207684_10176866
411 Ga0207654_10016599
412 Ga0207707_10004380
413 Ga0207695_10001027
414 Ga0207695_10001695
415 Ga0207695_10002643
416 Ga0207695_10008883
417 Ga0207695_10010331
418 Ga0207695_10070699
419 Ga0207695_10086586
420 Ga0207671_10009311
421 Ga0207671_10014055
422 Ga0207671_10036354
423 Ga0207671_10083434
424 Ga0207671_10243215
425 Ga0207663_10090752
426 Ga0207660_10035169
427 Ga0207660_10061209
428 Ga0207660_10065161
429 Ga0207657_10170544
430 Ga0207652_10003359
431 Ga0207694_10000632
432 Ga0207694_10006730
433 Ga0207687_10001416
434 Ga0207687_10009378
435 Ga0207700_10034940
436 Ga0207700_10471510
437 Ga0207664_10033446
438 Ga0207644_10047315
439 Ga0207690_10028855
440 Ga0207690_10224949
441 Ga0207706_10221620
442 Ga0207670_10190664
443 Ga0207691_10314496
444 Ga0207711_10001448
445 Ga0207661_10126734
446 Ga0207661_10202229
447 Ga0207667_10000682
448 Ga0207667_10000938
449 Ga0207667_10068394
450 Ga0207667_10082616
451 Ga0207667_10288570
452 Ga0207639_10030581
453 Ga0207702_10010506
454 Ga0207702_10039396
455 Ga0207702_10052858
456 Ga0207702_10055604
457 Ga0207702_10092867
458 Ga0207641_10099537
459 Ga0207674_10004826
460 Ga0207683_10253111
461 Ga0207698_10007728
462 Ga0207698_10056788
463 Ga0268266_10016262
464 Ga0265323_10003491
465 Ga0265336_10015793
466 Ga0265332_10029085
467 Ga0265328_10006858
468 Ga0265320_10002434
469 Ga0265325_10021359
470 Ga0265325_10061570
471 Ga0265325_10096028
472 Ga0265329_10030389
473 Ga0265340_10005776
474 Ga0265339_10072321
475 Ga0265331_10005411
476 Ga0265331_10063497
477 Ga0265316_10006594
478 Ga0265316_10007729
479 Ga0265316_10021889
480 Ga0265316_10056456
481 Ga0265316_10090655
482 Ga0265316_10134042
483 Ga0265314_10016044
484 Ga0265314_10033512
485 Ga0265314_10071511
486 Ga0265342_10010038
487 Ga0265342_10037659
488 Ga0265342_10081451
489 Ga0373923_0016912
490 Ga0373954_0126790
491 Ga0373943_0162240
492 Ga0373935_0070048
493 Ga0373935_0070181
494 Ga0373927_0051845
495 Ga0373927_0080750
496 Ga0373927_0266250
497 Ga0373933_0058596
498 Ga0373947_0039755
499 Ga0373947_0061576
500 Ga0373937_0013948
501 Ga0373937_0069075
502 Ga0373937_0247301
503 Ga0373937_0293548
504 Ga0373937_0333812
505 Ga0373925_0005499
506 Ga0373925_0054091
507 Ga0373925_0153237
508 Ga0395898_0209815
509 Ga0436364_0043824
510 Ga0436364_0417917
511 Ga0436364_0455971
512 Ga0436364_0527650
513 Ga0436364_0794765
514 Ga0436364_1369674
515 Ga0436365_0165286
516 Ga0436365_0233943
517 Ga0436361_0167314
518 Ga0436363_0669228
519 Ga0436363_0808725
520 Ga0436363_1063828
521 Ga0436362_1214423
522 Ga0466963_0110251
523 Ga0453684_0374804
524 Ga0466959_0057126
525 Ga0451576_0329005
526 Ga0466967_0111358
527 Ga0495629_0161836
528 Ga0495651_0052484
529 Ga0495651_0054221
530 Ga0495651_0072682
531 Ga0495580_0002695
532 Ga0495580_0002762
533 Ga0495580_0019619
534 Ga0495580_0214302
535 Ga0495580_0291584
536 Ga0495582_0018546
537 Ga0495582_0042087
538 Ga0495662_0024685
539 Ga0495664_0010524
540 Ga0495664_0046797
541 Ga0495594_0064030
542 Ga0495618_0126776
543 Ga0495628_0107441
544 Ga0495628_0108390
545 Ga0495652_0104273
546 Ga0495652_0244518
547 Ga0495665_0027748
548 Ga0495665_0059536
549 Ga0495640_0046559
550 Ga0495587_0084661
551 Ga0495667_0044607
552 Ga0495667_0064141
553 Ga0495634_0069226
554 Ga0495635_0192876
555 Ga0495635_0270120
556 Ga0495588_0070040
557 Ga0495657_0102034
558 Ga0495599_0004893
559 Ga0495623_0056929
560 Ga0495623_0071220
561 Ga0495658_0170993
562 Ga0495613_0142367
563 Ga0495613_0164059
564 Ga0495600_0046891
565 Ga0495600_0059080
566 Ga0495581_0056298
567 Ga0495604_0042691
568 Ga0495604_0109528
569 Ga0495674_0035898
570 Ga0495674_0037252
571 Ga0495674_0120571
572 Ga0495674_0217785
573 Ga0495674_0338019
574 Ga0495680_0035294
575 Ga0495680_0098584
576 Ga0495675_0098415
577 Ga0495684_0003644
578 Ga0495684_0008940
579 Ga0495684_0175003
580 Ga0495602_0020069
581 Ga0496104_0359580
582 Ga0496112_0017855
583 Ga0496112_0303564
584 Ga0496115_0095083
585 Ga0501031_0047321
586 Ga0501032_0006794
587 Ga0501033_0003571
588 Ga0501034_0037336
589 Ga0501034_0104700
590 Ga0501036_0000295
591 Ga0501037_0012282
592 Ga0501038_0001014
593 Ga0501039_0004528
594 Ga0501040_0093442
595 Ga0501043_0002917
596 Ga0501047_0102890
597 Ga0501067_0000758
598 Ga0501068_0001097
599 Ga0501069_0000735
600 Ga0501070_0039352
601 Ga0501072_0003952
602 Ga0501073_0016186
603 Ga0501074_0004689
604 Ga0501076_0036804
605 Ga0501077_0003719
606 Ga0501202_022114
607 Ga0501079_0001799
608 Ga0501080_0000017
609 Ga0501083_0023708
610 Ga0501035_0363331
611 Ga0501044_0001767
612 Ga0501044_0441167
613 Ga0501045_0289427
614 Ga0501084_0116154

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

80

248

0.96

PF16881

LIAS_N

N-terminal domain of lipoyl synthase of Radical_SAM family

17

65

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5exk-assembly6.cif.gz_K crystal structure of m. tuberculosis lipoyl synthase with 6-thiooctanoyl peptide intermediate 0.9366 13 299
4u0o-assembly1.cif.gz_B crystal structure of thermosynechococcus elongatus lipoyl synthase 2 complexed with mta and dtt 0.9265 16 292
4u0p-assembly1.cif.gz_B the crystal structure of lipoyl synthase in complex with s-adenosyl homocysteine 0.9208 15 292
4u0o-assembly1.cif.gz_B crystal structure of thermosynechococcus elongatus lipoyl synthase 2 complexed with mta and dtt 0.9199 16 292
5exi-assembly1.cif.gz_A crystal structure of m. tuberculosis lipoyl synthase at 2.28 a resolution 0.9055 28 299
ID Description Score Start End Superfamily
af_P9WK91_74_280_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9669 64 276 3.20.20.70
af_Q2FZX4_3_265_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.963 13 271 3.20.20.70
af_P60716_82_298_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9626 60 276 3.20.20.70
af_P9WK91_74_280_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9624 64 276 3.20.20.70
af_P0CH67_115_331_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9465 59 266 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A392NLD5-F1-model_v4 Lipoyl synthase 2 mitochondrial-like 0.9761 91 240 GO:0005739
GO:0016992
GO:0046872
GO:0051539
AF-A0A0C2F5F5-F1-model_v4 Radical SAM core domain-containing protein 0.9713 97 225 GO:0005739
GO:0016992
GO:0046872
GO:0051539
AF-A0A3C1S1M4-F1-model_v4 Lipoyl synthase 0.9704 100 212 GO:0016992
GO:0051539
AF-A0A535Q8R3-F1-model_v4 Lipoyl synthase (EC 2.8.1.8) (Lip-syn) (LS) (Lipoate synthase) (Lipoic acid synthase) (Sulfur insertion protein LipA) 0.9688 65 293 GO:0005737
GO:0016992
GO:0046872
GO:0051539
AF-A0A381PQZ6-F1-model_v4 lipoyl synthase (EC 2.8.1.8) 0.9674 41 285 GO:0016992
GO:0046872
GO:0051539

Map