F398640

General Info

Members Datasets Scaffolds Average Seq Length
306 193 612 206

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10007949|Ga0114129_1000794910
Length 245
Sequence MDGRAWGEWYRLSEAVDGTHVYSGAGSRERAADARRSIAPINPDPRKIKSFRTEAAFTAWMRANHAREPEIWLKIHKKGSGLPTVTPAQALDVALSWGWIDAIRKSFDERSFLQRYTPRRARSIWSQINRDHVARLTAAGRMTPHGQRQVDAAKADGRWDAAYAPMRSANQATIPEDLRAAIEADPRARKTFRTLGRQNLFALAFRTNNIKTPAGRAKKIAALVAMLARGETVFPERPRTSTARP

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
71 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
72 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
108 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
109 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
110 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
111 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
112 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
113 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
114 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
115 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
116 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
117 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
118 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
119 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
120 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
124 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
125 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
126 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
127 3300042132 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_070716_133 Metagenome Rhizosphere
128 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
129 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
130 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
131 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
132 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
133 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
134 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
135 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
136 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
137 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
138 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
139 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
140 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
141 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
142 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
143 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
144 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
145 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
146 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
147 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
148 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
149 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
150 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
151 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
152 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
153 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
154 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
155 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
156 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
157 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
158 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
159 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
160 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
161 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
162 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
163 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
164 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
165 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
166 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
173 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
174 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
175 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
176 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
177 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
178 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
180 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
181 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
182 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
183 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
184 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
185 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
186 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
187 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
188 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
189 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
190 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
191 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
192 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
193 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.63
Nodule 0
Rhizoplane 1.31
Rhizosphere 95.75
Stem 0
Stem Tuber 0
Unclassified 7.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10007949 3300009147 Bacteria 15093
2 rootH2_10132031 3300003320 Bacteria 2809
3 rootL2_10173098 3300003322 Bacteria 2163
4 rootH1_10077976 3300003323 Unclassified 1493
5 Ga0065715_10272858 3300005293 Bacteria 1106
6 Ga0070676_10125646 3300005328 Bacteria 1616
7 Ga0070683_100059949 3300005329 Bacteria 3536
8 Ga0070666_10028953 3300005335 Bacteria 3638
9 Ga0068868_100039836 3300005338 Bacteria 3654
10 Ga0068868_100040155 3300005338 Bacteria 3641
11 Ga0070691_10009802 3300005341 Unclassified 4368
12 Ga0070661_100109548 3300005344 Bacteria 2061
13 Ga0070668_100051663 3300005347 Bacteria 3168
14 Ga0070668_100170108 3300005347 Bacteria 1774
15 Ga0070668_100455468 3300005347 Bacteria 1101
16 Ga0070668_100846288 3300005347 Bacteria 815
17 Ga0070669_100028256 3300005353 Bacteria 4039
18 Ga0070669_100300897 3300005353 Bacteria 1290
19 Ga0070675_100103474 3300005354 Bacteria 2401
20 Ga0070675_100175432 3300005354 Bacteria 1851
21 Ga0070675_101163292 3300005354 Bacteria 710
22 Ga0070671_100062712 3300005355 Bacteria 3095
23 Ga0070674_100076811 3300005356 Bacteria 2375
24 Ga0070674_100409441 3300005356 Bacteria 1110
25 Ga0070673_101159911 3300005364 Bacteria 723
26 Ga0070701_10277630 3300005438 Bacteria 1022
27 Ga0070700_100028413 3300005441 Bacteria 3326
28 Ga0070700_100265476 3300005441 Bacteria 1238
29 Ga0070663_100519711 3300005455 Bacteria 991
30 Ga0070678_100057597 3300005456 Bacteria 2848
31 Ga0070662_100147646 3300005457 Bacteria 1828
32 Ga0068867_100091114 3300005459 Bacteria 2314
33 Ga0068867_100391581 3300005459 Bacteria 1170
34 Ga0070684_100033656 3300005535 Unclassified 4377
35 Ga0070672_100318097 3300005543 Bacteria 1322
36 Ga0070686_100486746 3300005544 Bacteria 955
37 Ga0070665_100034929 3300005548 Bacteria 5057
38 Ga0070665_100063311 3300005548 Bacteria 3708
39 Ga0070665_100196967 3300005548 Bacteria 2015
40 Ga0070665_100238476 3300005548 Bacteria 1819
41 Ga0070704_100013719 3300005549 Bacteria 5040
42 Ga0070704_100046763 3300005549 Bacteria 3021
43 Ga0070704_100614251 3300005549 Bacteria 957
44 Ga0068855_100095432 3300005563 Bacteria 3427
45 Ga0068854_100028369 3300005578 Bacteria 3867
46 Ga0068856_100080579 3300005614 Bacteria 3229
47 Ga0068856_100482883 3300005614 Bacteria 1260
48 Ga0068852_100014364 3300005616 Bacteria 6094
49 Ga0068859_100461584 3300005617 Bacteria 1366
50 Ga0068861_100004934 3300005719 Bacteria 8984
51 Ga0068861_100006914 3300005719 Bacteria 7750
52 Ga0068858_100128288 3300005842 Bacteria 2377
53 Ga0068858_100361700 3300005842 Bacteria 1391
54 Ga0068858_100462933 3300005842 Bacteria 1223
55 Ga0068862_100000118 3300005844 Bacteria 92548
56 Ga0068862_100043123 3300005844 Bacteria 3845
57 Ga0068862_100178563 3300005844 Bacteria 1904
58 Ga0068862_100189893 3300005844 Bacteria 1848
59 Ga0068862_101323114 3300005844 Bacteria 722
60 Ga0068862_101501490 3300005844 Bacteria 679
61 Ga0075365_10337362 3300006038 Bacteria 1062
62 Ga0097621_100016060 3300006237 Bacteria 5650
63 Ga0097621_100043325 3300006237 Bacteria 3627
64 Ga0068871_100002498 3300006358 Bacteria 12547
65 Ga0068871_100194266 3300006358 Bacteria 1749
66 Ga0068871_100202293 3300006358 Bacteria 1715
67 Ga0075428_100000012 3300006844 Bacteria 176329
68 Ga0075428_100144638 3300006844 Bacteria 2585
69 Ga0075430_100014064 3300006846 Bacteria 6823
70 Ga0075430_100175453 3300006846 Unclassified 1783
71 Ga0075430_100300710 3300006846 Bacteria 1327
72 Ga0075431_100013366 3300006847 Bacteria 8295
73 Ga0075431_100147340 3300006847 Bacteria 2425
74 Ga0075433_10179610 3300006852 Bacteria 1883
75 Ga0075434_100722067 3300006871 Bacteria 1013
76 Ga0075429_100026947 3300006880 Bacteria 4990
77 Ga0075429_100122708 3300006880 Bacteria 2271
78 Ga0075429_100276894 3300006880 Bacteria 1469
79 Ga0068865_100001846 3300006881 Bacteria 12430
80 Ga0097620_100461503 3300006931 Bacteria 1366
81 Ga0075435_100192855 3300007076 Bacteria 1725
82 Ga0111539_10000001 3300009094 Bacteria 1035431
83 Ga0111539_10011870 3300009094 Bacteria 10920
84 Ga0111539_10190418 3300009094 Bacteria 2394
85 Ga0111539_10232020 3300009094 Bacteria 2149
86 Ga0111539_11214912 3300009094 Unclassified 875
87 Ga0111539_11889402 3300009094 Bacteria 692
88 Ga0105245_10005298 3300009098 Bacteria 11331
89 Ga0105245_10072924 3300009098 Bacteria 3120
90 Ga0114129_10054188 3300009147 Bacteria 5624
91 Ga0114129_10094460 3300009147 Bacteria 4141
92 Ga0114129_10518395 3300009147 Unclassified 1554
93 Ga0105243_10220122 3300009148 Bacteria 1677
94 Ga0105241_10076203 3300009174 Bacteria 2615
95 Ga0105242_10376785 3300009176 Bacteria 1318
96 Ga0105248_10072937 3300009177 Bacteria 3859
97 Ga0105248_10091045 3300009177 Bacteria 3435
98 Ga0105248_10237820 3300009177 Bacteria 2050
99 Ga0105248_10285238 3300009177 Bacteria 1859
100 Ga0105248_10392093 3300009177 Bacteria 1563
101 Ga0105248_10552747 3300009177 Bacteria 1299
102 Ga0105237_10000053 3300009545 Bacteria 158890
103 Ga0105238_10290138 3300009551 Bacteria 1618
104 Ga0105249_10412980 3300009553 Bacteria 1382
105 Ga0105249_10444271 3300009553 Unclassified 1335
106 Ga0105239_10001462 3300010375 Bacteria 31410
107 Ga0105239_10103783 3300010375 Bacteria 3147
108 Ga0105246_10658005 3300011119 Bacteria 913
109 Ga0157371_10004910 3300013102 Bacteria 11488
110 Ga0157370_10082345 3300013104 Bacteria 3027
111 Ga0157369_10059436 3300013105 Bacteria 4122
112 Ga0157369_10650213 3300013105 Bacteria 1087
113 Ga0157374_10623997 3300013296 Bacteria 1089
114 Ga0163162_10010181 3300013306 Bacteria 9134
115 Ga0157372_10002638 3300013307 Bacteria 19415
116 Ga0157372_10064249 3300013307 Bacteria 4118
117 Ga0157372_10106217 3300013307 Bacteria 3212
118 Ga0163163_10027696 3300014325 Bacteria 5433
119 Ga0163163_11451317 3300014325 Bacteria 748
120 Ga0157380_10049981 3300014326 Bacteria 3301
121 Ga0157380_10323877 3300014326 Bacteria 1430
122 Ga0157380_10455682 3300014326 Bacteria 1230
123 Ga0157379_10056582 3300014968 Bacteria 3504
124 Ga0157379_10096549 3300014968 Bacteria 2653
125 Ga0157379_10725089 3300014968 Bacteria 934
126 Ga0157379_11022555 3300014968 Bacteria 789
127 Ga0157376_10160363 3300014969 Bacteria 2038
128 Ga0157376_10182445 3300014969 Bacteria 1920
129 Ga0157376_10972740 3300014969 Bacteria 870
130 Ga0163161_10334876 3300017792 Unclassified 1199
131 Ga0207673_1012824 3300025290 Bacteria 1095
132 Ga0207697_10000251 3300025315 Bacteria 29559
133 Ga0207642_10083121 3300025899 Bacteria 1560
134 Ga0207688_10005141 3300025901 Bacteria 7110
135 Ga0207645_10629853 3300025907 Bacteria 728
136 Ga0207671_10000555 3300025914 Bacteria 50279
137 Ga0207649_10096064 3300025920 Bacteria 1951
138 Ga0207681_10016617 3300025923 Bacteria 4606
139 Ga0207681_10044177 3300025923 Bacteria 2986
140 Ga0207681_10444747 3300025923 Bacteria 1054
141 Ga0207687_10093619 3300025927 Bacteria 2197
142 Ga0207700_10234807 3300025928 Unclassified 1561
143 Ga0207644_10046395 3300025931 Bacteria 3096
144 Ga0207706_10169909 3300025933 Bacteria 1916
145 Ga0207706_10349627 3300025933 Bacteria 1285
146 Ga0207686_10010293 3300025934 Bacteria 5089
147 Ga0207709_10067666 3300025935 Bacteria 2255
148 Ga0207669_10428080 3300025937 Bacteria 1043
149 Ga0207669_10589032 3300025937 Bacteria 902
150 Ga0207669_10672345 3300025937 Unclassified 849
151 Ga0207691_10227317 3300025940 Bacteria 1616
152 Ga0207691_10261630 3300025940 Bacteria 1491
153 Ga0207711_10101696 3300025941 Bacteria 2543
154 Ga0207711_10308481 3300025941 Bacteria 1461
155 Ga0207711_10625879 3300025941 Bacteria 1004
156 Ga0207661_10074826 3300025944 Bacteria 2777
157 Ga0207661_10793209 3300025944 Bacteria 872
158 Ga0207667_10292550 3300025949 Bacteria 1664
159 Ga0207712_10083342 3300025961 Bacteria 2333
160 Ga0207712_10181659 3300025961 Bacteria 1653
161 Ga0207668_10033177 3300025972 Bacteria 3418
162 Ga0207668_10141961 3300025972 Bacteria 1848
163 Ga0207668_10443190 3300025972 Bacteria 1107
164 Ga0207668_10863274 3300025972 Bacteria 804
165 Ga0207677_10248355 3300026023 Bacteria 1444
166 Ga0207678_10538840 3300026067 Bacteria 1020
167 Ga0207708_10016467 3300026075 Bacteria 5559
168 Ga0207708_10133545 3300026075 Bacteria 1942
169 Ga0207708_10225578 3300026075 Bacteria 1503
170 Ga0207708_10542988 3300026075 Bacteria 979
171 Ga0207702_10019906 3300026078 Bacteria 5559
172 Ga0207702_10312368 3300026078 Bacteria 1495
173 Ga0207641_10937290 3300026088 Bacteria 861
174 Ga0207648_10062221 3300026089 Bacteria 3254
175 Ga0207676_10846126 3300026095 Bacteria 895
176 Ga0207676_11049832 3300026095 Bacteria 804
177 Ga0207675_100104822 3300026118 Bacteria 2665
178 Ga0207675_100345768 3300026118 Unclassified 1456
179 Ga0207675_100908368 3300026118 Bacteria 897
180 Ga0207683_10014032 3300026121 Bacteria 6831
181 Ga0207683_10365126 3300026121 Bacteria 1326
182 Ga0207698_10527666 3300026142 Bacteria 1153
183 Ga0209971_1101874 3300027682 Unclassified 703
184 Ga0209998_10040898 3300027717 Unclassified 1052
185 Ga0207428_10000205 3300027907 Bacteria 82100
186 Ga0268266_10000708 3300028379 Bacteria 45085
187 Ga0268266_10030424 3300028379 Bacteria 4587
188 Ga0268266_10180812 3300028379 Bacteria 1920
189 Ga0268266_10511409 3300028379 Unclassified 1147
190 Ga0268266_10715108 3300028379 Bacteria 966
191 Ga0268265_10000139 3300028380 Bacteria 92561
192 Ga0268265_10169412 3300028380 Bacteria 1864
193 Ga0307408_100487691 3300031548 Bacteria 1076
194 Ga0307408_100750830 3300031548 Unclassified 881
195 Ga0307405_10241150 3300031731 Bacteria 1339
196 Ga0307407_10745853 3300031903 Bacteria 741
197 Ga0307412_10231191 3300031911 Unclassified 1424
198 Ga0307412_10282311 3300031911 Bacteria 1304
199 Ga0307409_100073378 3300031995 Bacteria 2729
200 Ga0307416_100278956 3300032002 Bacteria 1646
201 Ga0307414_10333795 3300032004 Unclassified 1295
202 Ga0307411_10023570 3300032005 Bacteria 3649
203 Ga0307411_10228567 3300032005 Bacteria 1448
204 Ga0307415_100167253 3300032126 Bacteria 1711
205 Ga0373950_0000069 3300034818 Bacteria 53065
206 Ga0373934_0193614 3300035086 Bacteria 836
207 Ga0373941_0102960 3300035115 Bacteria 996
208 Ga0373937_0124529 3300036401 Bacteria 2403
209 Ga0373937_0994725 3300036401 Bacteria 787
210 Ga0395899_0292097 3300037312 Bacteria 1105
211 Ga0395898_0171427 3300037466 Bacteria 2074
212 Ga0395901_0151518 3300038443 Bacteria 2436
213 Ga0451835_1123366 3300041492 Bacteria 840
214 Ga0450923_007517 3300042125 Bacteria 1846
215 Ga0450890_011761 3300042127 Bacteria 1132
216 Ga0450894_022022 3300042131 Bacteria 862
217 Ga0450895_000128 3300042132 Bacteria 3273
218 Ga0450896_003286 3300042133 Bacteria 2140
219 Ga0450900_014814 3300042136 Bacteria 1043
220 Ga0450906_007908 3300042145 Bacteria 2081
221 Ga0450908_020453 3300042184 Bacteria 1163
222 Ga0439440_0031322 3300042993 Unclassified 1257
223 Ga0466969_0120694 3300044656 Bacteria 1220
224 Ga0495592_0011558 3300046454 Bacteria 6683
225 Ga0495638_0000338 3300046460 Bacteria 59064
226 Ga0495651_0262014 3300046462 Bacteria 1176
227 Ga0495582_0122656 3300046473 Bacteria 1465
228 Ga0495628_0025563 3300046516 Bacteria 4823
229 Ga0495628_0727721 3300046516 Bacteria 699
230 Ga0495632_0001474 3300046519 Bacteria 19561
231 Ga0495637_0005996 3300046520 Bacteria 6143
232 Ga0495642_0178917 3300046528 Bacteria 923
233 Ga0495652_0036422 3300046529 Bacteria 4279
234 Ga0495654_0102190 3300046530 Bacteria 1318
235 Ga0495587_0003461 3300046536 Bacteria 10523
236 Ga0495645_0281415 3300046543 Bacteria 1093
237 Ga0495667_0001847 3300046559 Bacteria 14066
238 Ga0495656_0034186 3300046615 Bacteria 2080
239 Ga0495656_0352140 3300046615 Bacteria 763
240 Ga0495668_0010786 3300046616 Bacteria 5514
241 Ga0495611_0202775 3300046648 Bacteria 925
242 Ga0495599_0386971 3300046678 Bacteria 834
243 Ga0495623_0016929 3300046679 Bacteria 4709
244 Ga0495647_0286454 3300046681 Bacteria 740
245 Ga0495647_0322776 3300046681 Bacteria 699
246 Ga0495658_0065103 3300046683 Bacteria 2102
247 Ga0495669_0031761 3300046684 Bacteria 2319
248 Ga0495613_0248193 3300046689 Bacteria 1243
249 Ga0495600_0096040 3300046809 Bacteria 1932
250 Ga0495604_0219835 3300047317 Bacteria 1308
251 Ga0495674_0381343 3300047319 Unclassified 1141
252 Ga0495680_0403627 3300047322 Bacteria 943
253 Ga0495680_0648631 3300047322 Bacteria 702
254 Ga0495675_0051958 3300047444 Bacteria 2602
255 Ga0495686_0004411 3300047472 Bacteria 11591
256 Ga0495686_0038189 3300047472 Bacteria 3072
257 Ga0495686_0039879 3300047472 Bacteria 2997
258 Ga0496104_0316143 3300048907 Unclassified 1475
259 Ga0496108_0181147 3300048911 Bacteria 1825
260 Ga0496110_0073906 3300048913 Bacteria 3026
261 Ga0496112_0017830 3300048915 Bacteria 6681
262 Ga0501034_0014622 3300049571 Bacteria 8082
263 Ga0501034_0677813 3300049571 Bacteria 931
264 Ga0501036_0014563 3300049572 Bacteria 6549
265 Ga0501037_0155272 3300049573 Bacteria 1634
266 Ga0501038_0051154 3300049574 Bacteria 3568
267 Ga0501043_0057594 3300049579 Bacteria 3051
268 Ga0501047_0038004 3300049581 Bacteria 4656
269 Ga0501067_0000024 3300049583 Bacteria 92998
270 Ga0501067_0027895 3300049583 Bacteria 3129
271 Ga0501069_0252128 3300049585 Unclassified 1030
272 Ga0501070_0014223 3300049586 Bacteria 6697
273 Ga0501070_0319064 3300049586 Bacteria 1264
274 Ga0501073_0000294 3300049589 Bacteria 32851
275 Ga0501073_0220547 3300049589 Bacteria 1310
276 Ga0501074_0286879 3300049590 Bacteria 1170
277 Ga0501080_0032302 3300049742 Bacteria 4881
278 Ga0501080_0204019 3300049742 Bacteria 1814
279 Ga0501080_0875801 3300049742 Bacteria 784
280 Ga0501035_0010112 3300049822 Bacteria 8757
281 Ga0501044_0037348 3300049823 Bacteria 5077
282 nmdc:mga05p37_107168_c1 3300050507 Unclassified 3438
283 nmdc:mga09592_176029_c1 3300050508 Bacteria 1850
284 nmdc:mga09592_337294_c1 3300050508 Bacteria 1305
285 nmdc:mga09592_88336_c1 3300050508 Bacteria 2647
286 nmdc:mga0qj67_148024_c1 3300050509 Bacteria 1904
287 nmdc:mga0qj67_283771_c1 3300050509 Bacteria 1342
288 nmdc:mga0qj67_77829_c1 3300050509 Bacteria 2654
289 nmdc:mga0qj67_924149_c1 3300050509 Bacteria 687
290 nmdc:mga06r32_11670_c1 3300050510 Bacteria 7909
291 nmdc:mga06r32_23119_c2 3300050510 Bacteria 3336
292 nmdc:mga06r32_689575_c1 3300050510 Bacteria 988
293 nmdc:mga08y16_205537_c1 3300050511 Bacteria 2040
294 nmdc:mga08y16_3_c1 3300050511 Bacteria 936907
295 nmdc:mga08y16_57803_c1 3300050511 Bacteria 4052
296 nmdc:mga08y16_83649_c1 3300050511 Bacteria 3326
297 nmdc:mga08y16_854812_c1 3300050511 Unclassified 899
298 nmdc:mga0n895_280539_c1 3300050512 Bacteria 1689
299 nmdc:mga0rr50_58767_c1 3300050513 Bacteria 2883
300 nmdc:mga0a205_519537_c1 3300050515 Bacteria 1047
301 Ga0495595_0102584 3300053084 Bacteria 1382
302 Ga0495619_0574456 3300053085 Bacteria 772
303 Ga0500562_047816 3300053108 Bacteria 1142
304 Ga0500658_0003228 3300053134 Bacteria 6197
305 Ga0500616_0000066 3300053153 Bacteria 237304
306 Ga0500645_003376 3300053730 Bacteria 6527
307 Ga0114129_10007949
308 rootH2_10132031
309 rootL2_10173098
310 rootH1_10077976
311 Ga0065715_10272858
312 Ga0070676_10125646
313 Ga0070683_100059949
314 Ga0070666_10028953
315 Ga0068868_100039836
316 Ga0068868_100040155
317 Ga0070691_10009802
318 Ga0070661_100109548
319 Ga0070668_100051663
320 Ga0070668_100170108
321 Ga0070668_100455468
322 Ga0070668_100846288
323 Ga0070669_100028256
324 Ga0070669_100300897
325 Ga0070675_100103474
326 Ga0070675_100175432
327 Ga0070675_101163292
328 Ga0070671_100062712
329 Ga0070674_100076811
330 Ga0070674_100409441
331 Ga0070673_101159911
332 Ga0070701_10277630
333 Ga0070700_100028413
334 Ga0070700_100265476
335 Ga0070663_100519711
336 Ga0070678_100057597
337 Ga0070662_100147646
338 Ga0068867_100091114
339 Ga0068867_100391581
340 Ga0070684_100033656
341 Ga0070672_100318097
342 Ga0070686_100486746
343 Ga0070665_100034929
344 Ga0070665_100063311
345 Ga0070665_100196967
346 Ga0070665_100238476
347 Ga0070704_100013719
348 Ga0070704_100046763
349 Ga0070704_100614251
350 Ga0068855_100095432
351 Ga0068854_100028369
352 Ga0068856_100080579
353 Ga0068856_100482883
354 Ga0068852_100014364
355 Ga0068859_100461584
356 Ga0068861_100004934
357 Ga0068861_100006914
358 Ga0068858_100128288
359 Ga0068858_100361700
360 Ga0068858_100462933
361 Ga0068862_100000118
362 Ga0068862_100043123
363 Ga0068862_100178563
364 Ga0068862_100189893
365 Ga0068862_101323114
366 Ga0068862_101501490
367 Ga0075365_10337362
368 Ga0097621_100016060
369 Ga0097621_100043325
370 Ga0068871_100002498
371 Ga0068871_100194266
372 Ga0068871_100202293
373 Ga0075428_100000012
374 Ga0075428_100144638
375 Ga0075430_100014064
376 Ga0075430_100175453
377 Ga0075430_100300710
378 Ga0075431_100013366
379 Ga0075431_100147340
380 Ga0075433_10179610
381 Ga0075434_100722067
382 Ga0075429_100026947
383 Ga0075429_100122708
384 Ga0075429_100276894
385 Ga0068865_100001846
386 Ga0097620_100461503
387 Ga0075435_100192855
388 Ga0111539_10000001
389 Ga0111539_10011870
390 Ga0111539_10190418
391 Ga0111539_10232020
392 Ga0111539_11214912
393 Ga0111539_11889402
394 Ga0105245_10005298
395 Ga0105245_10072924
396 Ga0114129_10054188
397 Ga0114129_10094460
398 Ga0114129_10518395
399 Ga0105243_10220122
400 Ga0105241_10076203
401 Ga0105242_10376785
402 Ga0105248_10072937
403 Ga0105248_10091045
404 Ga0105248_10237820
405 Ga0105248_10285238
406 Ga0105248_10392093
407 Ga0105248_10552747
408 Ga0105237_10000053
409 Ga0105238_10290138
410 Ga0105249_10412980
411 Ga0105249_10444271
412 Ga0105239_10001462
413 Ga0105239_10103783
414 Ga0105246_10658005
415 Ga0157371_10004910
416 Ga0157370_10082345
417 Ga0157369_10059436
418 Ga0157369_10650213
419 Ga0157374_10623997
420 Ga0163162_10010181
421 Ga0157372_10002638
422 Ga0157372_10064249
423 Ga0157372_10106217
424 Ga0163163_10027696
425 Ga0163163_11451317
426 Ga0157380_10049981
427 Ga0157380_10323877
428 Ga0157380_10455682
429 Ga0157379_10056582
430 Ga0157379_10096549
431 Ga0157379_10725089
432 Ga0157379_11022555
433 Ga0157376_10160363
434 Ga0157376_10182445
435 Ga0157376_10972740
436 Ga0163161_10334876
437 Ga0207673_1012824
438 Ga0207697_10000251
439 Ga0207642_10083121
440 Ga0207688_10005141
441 Ga0207645_10629853
442 Ga0207671_10000555
443 Ga0207649_10096064
444 Ga0207681_10016617
445 Ga0207681_10044177
446 Ga0207681_10444747
447 Ga0207687_10093619
448 Ga0207700_10234807
449 Ga0207644_10046395
450 Ga0207706_10169909
451 Ga0207706_10349627
452 Ga0207686_10010293
453 Ga0207709_10067666
454 Ga0207669_10428080
455 Ga0207669_10589032
456 Ga0207669_10672345
457 Ga0207691_10227317
458 Ga0207691_10261630
459 Ga0207711_10101696
460 Ga0207711_10308481
461 Ga0207711_10625879
462 Ga0207661_10074826
463 Ga0207661_10793209
464 Ga0207667_10292550
465 Ga0207712_10083342
466 Ga0207712_10181659
467 Ga0207668_10033177
468 Ga0207668_10141961
469 Ga0207668_10443190
470 Ga0207668_10863274
471 Ga0207677_10248355
472 Ga0207678_10538840
473 Ga0207708_10016467
474 Ga0207708_10133545
475 Ga0207708_10225578
476 Ga0207708_10542988
477 Ga0207702_10019906
478 Ga0207702_10312368
479 Ga0207641_10937290
480 Ga0207648_10062221
481 Ga0207676_10846126
482 Ga0207676_11049832
483 Ga0207675_100104822
484 Ga0207675_100345768
485 Ga0207675_100908368
486 Ga0207683_10014032
487 Ga0207683_10365126
488 Ga0207698_10527666
489 Ga0209971_1101874
490 Ga0209998_10040898
491 Ga0207428_10000205
492 Ga0268266_10000708
493 Ga0268266_10030424
494 Ga0268266_10180812
495 Ga0268266_10511409
496 Ga0268266_10715108
497 Ga0268265_10000139
498 Ga0268265_10169412
499 Ga0307408_100487691
500 Ga0307408_100750830
501 Ga0307405_10241150
502 Ga0307407_10745853
503 Ga0307412_10231191
504 Ga0307412_10282311
505 Ga0307409_100073378
506 Ga0307416_100278956
507 Ga0307414_10333795
508 Ga0307411_10023570
509 Ga0307411_10228567
510 Ga0307415_100167253
511 Ga0373950_0000069
512 Ga0373934_0193614
513 Ga0373941_0102960
514 Ga0373937_0124529
515 Ga0373937_0994725
516 Ga0395899_0292097
517 Ga0395898_0171427
518 Ga0395901_0151518
519 Ga0451835_1123366
520 Ga0450923_007517
521 Ga0450890_011761
522 Ga0450894_022022
523 Ga0450895_000128
524 Ga0450896_003286
525 Ga0450900_014814
526 Ga0450906_007908
527 Ga0450908_020453
528 Ga0439440_0031322
529 Ga0466969_0120694
530 Ga0495592_0011558
531 Ga0495638_0000338
532 Ga0495651_0262014
533 Ga0495582_0122656
534 Ga0495628_0025563
535 Ga0495628_0727721
536 Ga0495632_0001474
537 Ga0495637_0005996
538 Ga0495642_0178917
539 Ga0495652_0036422
540 Ga0495654_0102190
541 Ga0495587_0003461
542 Ga0495645_0281415
543 Ga0495667_0001847
544 Ga0495656_0034186
545 Ga0495656_0352140
546 Ga0495668_0010786
547 Ga0495611_0202775
548 Ga0495599_0386971
549 Ga0495623_0016929
550 Ga0495647_0286454
551 Ga0495647_0322776
552 Ga0495658_0065103
553 Ga0495669_0031761
554 Ga0495613_0248193
555 Ga0495600_0096040
556 Ga0495604_0219835
557 Ga0495674_0381343
558 Ga0495680_0403627
559 Ga0495680_0648631
560 Ga0495675_0051958
561 Ga0495686_0004411
562 Ga0495686_0038189
563 Ga0495686_0039879
564 Ga0496104_0316143
565 Ga0496108_0181147
566 Ga0496110_0073906
567 Ga0496112_0017830
568 Ga0501034_0014622
569 Ga0501034_0677813
570 Ga0501036_0014563
571 Ga0501037_0155272
572 Ga0501038_0051154
573 Ga0501043_0057594
574 Ga0501047_0038004
575 Ga0501067_0000024
576 Ga0501067_0027895
577 Ga0501069_0252128
578 Ga0501070_0014223
579 Ga0501070_0319064
580 Ga0501073_0000294
581 Ga0501073_0220547
582 Ga0501074_0286879
583 Ga0501080_0032302
584 Ga0501080_0204019
585 Ga0501080_0875801
586 Ga0501035_0010112
587 Ga0501044_0037348
588 nmdc:mga05p37_107168_c1
589 nmdc:mga09592_176029_c1
590 nmdc:mga09592_337294_c1
591 nmdc:mga09592_88336_c1
592 nmdc:mga0qj67_148024_c1
593 nmdc:mga0qj67_283771_c1
594 nmdc:mga0qj67_77829_c1
595 nmdc:mga0qj67_924149_c1
596 nmdc:mga06r32_11670_c1
597 nmdc:mga06r32_23119_c2
598 nmdc:mga06r32_689575_c1
599 nmdc:mga08y16_205537_c1
600 nmdc:mga08y16_3_c1
601 nmdc:mga08y16_57803_c1
602 nmdc:mga08y16_83649_c1
603 nmdc:mga08y16_854812_c1
604 nmdc:mga0n895_280539_c1
605 nmdc:mga0rr50_58767_c1
606 nmdc:mga0a205_519537_c1
607 Ga0495595_0102584
608 Ga0495619_0574456
609 Ga0500562_047816
610 Ga0500658_0003228
611 Ga0500616_0000066
612 Ga0500645_003376

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13376

OmdA

Bacteriocin-protection, YdeI or OmpD-Associated

171

230

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
8big-assembly1.cif.gz_A o-methyltransferase plu4895 in complex with sah 0.7736 25 90
8bii-assembly3.cif.gz_G-2 o-methyltransferase plu4895 (mutant h229n) in complex with sah 0.7687 25 90
7wuy-assembly1.cif.gz_B the crystal structure of fini in complex with sam and fischerin 0.7664 26 90
8bic-assembly1.cif.gz_A o-methyltransferase plu4891 in complex with sah 0.7659 20 88
8bii-assembly4.cif.gz_E o-methyltransferase plu4895 (mutant h229n) in complex with sah 0.7639 20 90
ID Description Score Start End Superfamily
af_Q7ZVJ8_3_201_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7769 42 87 3.40.50.150
af_P9WLG9_29_152_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.733 26 91 3.40.50.150
3gwzD02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7313 26 90 3.40.50.150
3i9fA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7249 28 91 3.40.50.150
4qdjA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.723 26 90 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A2A3U8J8-F1-model_v4 deleted 0.9856 20 130
AF-A0A7V9T740-F1-model_v4 YdeI/OmpD-associated family protein 0.981 15 131
AF-A0A1H1ZIM3-F1-model_v4 Bacteriocin-protection, YdeI or OmpD-Associated 0.9806 19 124
AF-A0A4P6JNQ1-F1-model_v4 Bacteriocin-protection protein 0.9798 18 131
AF-K0ENK6-F1-model_v4 OmdA domain containing protein 0.9794 16 133

Map