F398509

General Info

Members Datasets Scaffolds Average Seq Length
306 227 612 636

Family's Representative Sequence

Representative Sequence 3300005406|Ga0070703_10000002|Ga0070703_10000002152
Length 674
Sequence VRHPAARPPQARGGCRAAPIGGRLATPAKRTTRTRTTKQQPGYDSSSIQVLEGLEPVRKRPGMYIGTTSSRGLHHLVYEVVDNAIDEAMAGYCDKIVVTLHADGSASVLDNGRGIPVKPIPGRKDRRPALEIVLTVLHAGGKFGGEGYKISGGLHGVGVSVVNALSQKLDAQVQRDGSTYTMAFSRGKVTKKLTKGKGSSKTGTSIRFWPDPEIFTEGVEFEGKILADRLKELAFLNKGVEIHLVDERAGSKEVFKATGGLVDFVKYLAEGREPLHRVVYFEAKEGDGTAEVEIALQWNNSYAESFHSFANTINTHEGGMHEEGLKKALTNVLNRYARSKGLLREKEENLIGEDVREGLIAIVSVKLRDPQFEGQTKTKLGNASIRSFVETTVNAKLAEWLEEHPGDGKRIVTKGASAAKARLAAKQARDLTRRKSFLESGSLPGKLADCQLNDPAACEIYIVEGDSAGGSAKQARDPATQAILPIRGKILNVEKARLHKILENIEIQALITAIGTGIGDEFDITRARYHRIVLMADADVDGAHIRTLLLTYFFRYMRDLIDAGYVYLAQPPLYLVKEGKQELYFYTERQWDDYRNANGNGKKLDPQRFKGLGEMDASQLWETTMDPERRTLLQVTLDDAATADHLFTVLMGEDVPPRKEFIEANARYVQNLDV

Samples

Sample ID Description Type Environment
1 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
5 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
6 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
41 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
55 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
78 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
79 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
80 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
83 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
84 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
85 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
86 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
87 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
88 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
89 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
90 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
91 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
92 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
93 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
94 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
97 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
98 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
99 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
100 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
101 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
102 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
103 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
104 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
105 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
106 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
107 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
108 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
109 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
110 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
111 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
112 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
113 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
114 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
115 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
116 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
117 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
118 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
119 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
120 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
121 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
122 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
125 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
126 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
132 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
133 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
134 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
135 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
136 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
137 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
138 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
139 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
148 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
149 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
150 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
151 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
152 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
153 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
154 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
155 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
156 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
157 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
158 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
159 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
160 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
161 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
162 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
163 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
164 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
165 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
166 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
167 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
168 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
169 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
170 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
171 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
172 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
173 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
174 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
175 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
176 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
177 2671180694 Paenibacillus sp. A3 Isolate Unclassified
178 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
179 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
180 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
181 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
182 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
183 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
184 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
185 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
186 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
187 2831905167 Ammoniphilus oxalaticus RAOx-1 Isolate Rhizosphere
188 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
189 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
190 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
191 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
192 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
193 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
194 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
195 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
196 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
197 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
198 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
199 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
200 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
201 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
202 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
203 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
204 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
205 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
206 2929297113 Heliophilum fasciatum MTM Isolate Rhizosphere
207 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
208 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
209 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
210 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
211 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
212 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
213 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
214 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
215 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
216 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
217 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
218 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
219 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
220 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
221 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
222 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
223 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
224 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
225 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
226 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
227 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.74
Metatranscriptomes 0.65
Isolates 19.61

Biome Distribution

Category Percentage (%)
Aerial Root 0.65
Bulb 0
Endosphere 4.25
Nodule 0.65
Rhizoplane 4.58
Rhizosphere 78.1
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070703_10000002 3300005406 Bacteria 167332
2 JGI25151J46595_10007088 3300003187 Bacteria 5532
3 Ga0006562J51391_1007631 3300003578 Bacteria 6267
4 Ga0006562J51391_1008302 3300003578 Bacteria 5970
5 Ga0055538_1000320 3300003751 Bacteria 22297
6 Ga0055538_1000734 3300003751 Bacteria 9608
7 Ga0055532_1003176 3300003758 Bacteria 2948
8 Ga0055541_1000328 3300003841 Bacteria 15339
9 Ga0070683_100022197 3300005329 Bacteria 5669
10 Ga0070670_100003956 3300005331 Bacteria 12364
11 Ga0070670_100023783 3300005331 Bacteria 5272
12 Ga0070670_100067138 3300005331 Bacteria 3078
13 Ga0070680_100002085 3300005336 Bacteria 14766
14 Ga0070691_10000572 3300005341 Bacteria 14054
15 Ga0070692_10020468 3300005345 Bacteria 3209
16 Ga0070673_100093466 3300005364 Bacteria 2463
17 Ga0070673_100103567 3300005364 Bacteria 2349
18 Ga0070711_100002530 3300005439 Bacteria 10458
19 Ga0070711_100059256 3300005439 Bacteria 2657
20 Ga0070708_100001690 3300005445 Bacteria 16963
21 Ga0070662_100000879 3300005457 Bacteria 18354
22 Ga0068867_100026533 3300005459 Bacteria 4161
23 Ga0070706_100002631 3300005467 Bacteria 17985
24 Ga0070707_100047934 3300005468 Bacteria 4091
25 Ga0070698_100007651 3300005471 Bacteria 11689
26 Ga0070698_100013934 3300005471 Bacteria 8503
27 Ga0070698_100058278 3300005471 Bacteria 3905
28 Ga0070699_100004034 3300005518 Bacteria 12974
29 Ga0070699_100071771 3300005518 Bacteria 3012
30 Ga0070684_100005873 3300005535 Bacteria 9450
31 Ga0070697_100005299 3300005536 Bacteria 9907
32 Ga0070672_100019817 3300005543 Bacteria 4892
33 Ga0070686_100000031 3300005544 Bacteria 115929
34 Ga0070696_100003874 3300005546 Bacteria 9991
35 Ga0070696_100007739 3300005546 Bacteria 7172
36 Ga0070704_100005752 3300005549 Bacteria 7250
37 Ga0070704_100034667 3300005549 Bacteria 3425
38 Ga0068852_100039178 3300005616 Bacteria 3989
39 Ga0068861_100068289 3300005719 Bacteria 2746
40 Ga0068870_10001013 3300005840 Bacteria 11113
41 Ga0068863_100002225 3300005841 Bacteria 19260
42 Ga0081455_10002054 3300005937 Bacteria 24070
43 Ga0081455_10009902 3300005937 Bacteria 9752
44 Ga0081455_10014291 3300005937 Bacteria 7790
45 Ga0081455_10019254 3300005937 Bacteria 6465
46 Ga0081539_10005857 3300005985 Bacteria 12184
47 Ga0081539_10016867 3300005985 Bacteria 5178
48 Ga0081539_10030597 3300005985 Bacteria 3337
49 Ga0070712_100004694 3300006175 Bacteria 8448
50 Ga0075428_100028662 3300006844 Bacteria 6159
51 Ga0075428_100034772 3300006844 Bacteria 5557
52 Ga0075430_100000430 3300006846 Bacteria 31172
53 Ga0075431_100015957 3300006847 Bacteria 7621
54 Ga0075431_100061696 3300006847 Bacteria 3868
55 Ga0075433_10003715 3300006852 Bacteria 11815
56 Ga0075433_10014406 3300006852 Bacteria 6458
57 Ga0075434_100003249 3300006871 Bacteria 14516
58 Ga0075434_100013428 3300006871 Bacteria 7794
59 Ga0075434_100034136 3300006871 Bacteria 5023
60 Ga0075434_100054919 3300006871 Bacteria 3957
61 Ga0075429_100002843 3300006880 Bacteria 14645
62 Ga0075429_100029131 3300006880 Bacteria 4795
63 Ga0075429_100034818 3300006880 Bacteria 4376
64 Ga0105251_10012332 3300009011 Bacteria 4839
65 Ga0105244_10000045 3300009036 Bacteria 146285
66 Ga0111539_10020304 3300009094 Bacteria 8185
67 Ga0111539_10040621 3300009094 Bacteria 5599
68 Ga0111539_10077645 3300009094 Bacteria 3908
69 Ga0114129_10000809 3300009147 Bacteria 40224
70 Ga0114129_10017181 3300009147 Bacteria 10305
71 Ga0114129_10030017 3300009147 Bacteria 7697
72 Ga0114129_10183917 3300009147 Bacteria 2842
73 Ga0105243_10019544 3300009148 Bacteria 5136
74 Ga0105242_10011225 3300009176 Bacteria 6884
75 Ga0105248_10018956 3300009177 Bacteria 7608
76 Ga0105238_10000254 3300009551 Bacteria 59748
77 Ga0105238_10032310 3300009551 Bacteria 5325
78 Ga0105249_10013399 3300009553 Bacteria 7241
79 Ga0105249_10027035 3300009553 Bacteria 5175
80 Ga0157371_10002410 3300013102 Bacteria 17889
81 Ga0157371_10037912 3300013102 Bacteria 3449
82 Ga0157378_10002162 3300013297 Bacteria 17465
83 Ga0157378_10044093 3300013297 Bacteria 3960
84 Ga0209784_100044 3300025224 Bacteria 206858
85 Ga0209784_100157 3300025224 Bacteria 61480
86 Ga0209566_100321 3300025225 Bacteria 43533
87 Ga0209258_101759 3300025242 Bacteria 6678
88 Ga0209025_1004814 3300025294 Bacteria 11415
89 Ga0209025_1011179 3300025294 Bacteria 5964
90 Ga0209025_1011258 3300025294 Bacteria 5920
91 Ga0209025_1026402 3300025294 Bacteria 2918
92 Ga0207655_1000174 3300025728 Bacteria 116424
93 Ga0207653_10000001 3300025885 Bacteria 287007
94 Ga0207642_10006666 3300025899 Bacteria 3855
95 Ga0207643_10000826 3300025908 Bacteria 18787
96 Ga0207684_10000078 3300025910 Bacteria 181899
97 Ga0207707_10027862 3300025912 Bacteria 4940
98 Ga0207646_10007252 3300025922 Bacteria 11303
99 Ga0207646_10047768 3300025922 Bacteria 3838
100 Ga0207694_10000096 3300025924 Bacteria 98920
101 Ga0207650_10059528 3300025925 Bacteria 2847
102 Ga0207650_10079982 3300025925 Bacteria 2477
103 Ga0207659_10057086 3300025926 Bacteria 2798
104 Ga0207706_10002183 3300025933 Bacteria 19082
105 Ga0207691_10001317 3300025940 Bacteria 24757
106 Ga0207711_10006249 3300025941 Bacteria 10052
107 Ga0207661_10014296 3300025944 Bacteria 5814
108 Ga0207651_10019840 3300025960 Bacteria 4041
109 Ga0207678_10017973 3300026067 Bacteria 6212
110 Ga0207708_10005966 3300026075 Bacteria 9020
111 Ga0207641_10034055 3300026088 Bacteria 4234
112 Ga0207648_10032754 3300026089 Bacteria 4586
113 Ga0207674_10000174 3300026116 Bacteria 78300
114 Ga0207675_100064952 3300026118 Bacteria 3411
115 Ga0209966_1001008 3300027695 Bacteria 5264
116 Ga0207428_10000842 3300027907 Bacteria 34513
117 Ga0207428_10022378 3300027907 Bacteria 5336
118 Ga0207428_10032303 3300027907 Bacteria 4306
119 Ga0265332_10015149 3300031238 Bacteria 3405
120 Ga0265314_10051407 3300031711 Bacteria 2870
121 Ga0307412_10023251 3300031911 Bacteria 3811
122 Ga0307416_100081428 3300032002 Bacteria 2737
123 Ga0373959_0000057 3300034820 Bacteria 25522
124 Ga0373926_0000234 3300035083 Bacteria 13282
125 Ga0373944_0000078 3300035089 Bacteria 16616
126 Ga0373923_0001975 3300035111 Bacteria 6155
127 Ga0373936_0000272 3300035113 Bacteria 17132
128 Ga0373939_0009166 3300035114 Bacteria 2449
129 Ga0373946_0000276 3300035171 Bacteria 16420
130 Ga0316574_0025585 3300035398 Bacteria 3543
131 Ga0373931_0015587 3300035691 Bacteria 3731
132 Ga0316584_0051628 3300036712 Bacteria 3075
133 Ga0395899_0001100 3300037312 Bacteria 24215
134 Ga0395899_0086152 3300037312 Bacteria 2282
135 Ga0395900_0001548 3300037418 Bacteria 27326
136 Ga0395900_0005526 3300037418 Bacteria 13238
137 Ga0395900_0054023 3300037418 Bacteria 4135
138 Ga0395898_0001477 3300037466 Bacteria 32816
139 Ga0395898_0072100 3300037466 Bacteria 3337
140 Ga0395898_0206560 3300037466 Bacteria 1874
141 Ga0395901_0001185 3300038443 Bacteria 27735
142 Ga0395901_0004248 3300038443 Bacteria 14450
143 Ga0395901_0030648 3300038443 Bacteria 5542
144 Ga0395901_0047415 3300038443 Bacteria 4461
145 Ga0395901_0062837 3300038443 Bacteria 3864
146 Ga0451577_0000001 3300042876 Bacteria 2461803
147 Ga0453684_0001438 3300044712 Bacteria 67996
148 Ga0453684_0008265 3300044712 Bacteria 18759
149 Ga0453684_0084117 3300044712 Bacteria 3959
150 Ga0451576_0186882 3300045051 Bacteria 2164
151 Ga0495603_0024020 3300046455 Bacteria 3687
152 Ga0495603_0026122 3300046455 Bacteria 3529
153 Ga0495580_0010893 3300046472 Bacteria 7057
154 Ga0495580_0020119 3300046472 Bacteria 4947
155 Ga0495582_0012600 3300046473 Bacteria 4661
156 Ga0495639_0004533 3300046475 Bacteria 5957
157 Ga0495594_0031748 3300046499 Bacteria 2865
158 Ga0495618_0041716 3300046514 Bacteria 2891
159 Ga0495631_0025802 3300046518 Bacteria 2703
160 Ga0495644_0023494 3300046523 Bacteria 2346
161 Ga0495665_0003134 3300046531 Bacteria 8948
162 Ga0495640_0005181 3300046533 Bacteria 10359
163 Ga0495586_0008914 3300046535 Bacteria 5340
164 Ga0495598_0001941 3300046537 Bacteria 4193
165 Ga0495633_0037562 3300046558 Bacteria 2317
166 Ga0495667_0043609 3300046559 Bacteria 2972
167 Ga0495635_0010018 3300046663 Bacteria 6627
168 Ga0495659_0007344 3300046664 Bacteria 3495
169 Ga0495661_0059067 3300046665 Bacteria 2284
170 Ga0495658_0028762 3300046683 Bacteria 3002
171 Ga0495613_0023401 3300046689 Bacteria 4602
172 Ga0495624_0004136 3300046690 Bacteria 10669
173 Ga0495670_0024861 3300046691 Bacteria 2960
174 Ga0495581_0004013 3300047315 Bacteria 8478
175 Ga0495614_0012396 3300048089 Bacteria 3740
176 Ga0496101_0023405 3300048904 Bacteria 4267
177 Ga0496102_0039719 3300048905 Bacteria 4253
178 Ga0496103_0016787 3300048906 Bacteria 4373
179 Ga0496106_0006558 3300048909 Bacteria 8620
180 Ga0496107_0006766 3300048910 Bacteria 7889
181 Ga0496107_0055599 3300048910 Bacteria 2858
182 Ga0496108_0021071 3300048911 Bacteria 5355
183 Ga0496109_0005113 3300048912 Bacteria 10958
184 Ga0496109_0022830 3300048912 Bacteria 5544
185 Ga0496110_0019093 3300048913 Bacteria 5763
186 Ga0496110_0023933 3300048913 Bacteria 5200
187 Ga0496110_0049384 3300048913 Bacteria 3691
188 Ga0496114_0003161 3300048917 Bacteria 12630
189 Ga0496116_0006013 3300048919 Bacteria 11116
190 Ga0496116_0030900 3300048919 Bacteria 3842
191 Ga0496117_0008862 3300048920 Bacteria 9494
192 Ga0496119_0002345 3300048922 Bacteria 20856
193 Ga0496119_0034716 3300048922 Bacteria 3314
194 Ga0496120_0005619 3300048923 Bacteria 9933
195 Ga0496120_0006591 3300048923 Bacteria 8864
196 Ga0496122_0002911 3300048925 Bacteria 23381
197 Ga0496122_0005119 3300048925 Bacteria 15820
198 Ga0496123_0040339 3300048926 Bacteria 3253
199 Ga0496124_0000258 3300048927 Bacteria 101956
200 Ga0496125_0002823 3300048928 Bacteria 21905
201 Ga0496125_0013093 3300048928 Bacteria 8179
202 Ga0501038_0041182 3300049574 Bacteria 4029
203 Ga0501039_0008155 3300049575 Bacteria 7981
204 Ga0501040_0030673 3300049576 Bacteria 3632
205 Ga0501041_0005890 3300049577 Bacteria 7163
206 Ga0501041_0030961 3300049577 Bacteria 3230
207 Ga0501041_0094713 3300049577 Bacteria 1845
208 Ga0501042_0009897 3300049578 Bacteria 6369
209 Ga0501042_0010048 3300049578 Bacteria 6328
210 Ga0501043_0027488 3300049579 Bacteria 4465
211 Ga0501046_0039967 3300049580 Bacteria 3752
212 Ga0501072_0010989 3300049588 Bacteria 6904
213 Ga0501072_0016752 3300049588 Bacteria 5630
214 Ga0501072_0038361 3300049588 Bacteria 3760
215 Ga0501075_0006342 3300049591 Bacteria 8130
216 Ga0501077_0010790 3300049593 Bacteria 5691
217 Ga0501077_0016667 3300049593 Bacteria 4631
218 Ga0501077_0017927 3300049593 Bacteria 4475
219 Ga0501216_000891 3300049660 Bacteria 3786
220 Ga0501233_002725 3300049668 Bacteria 3132
221 Ga0501235_000844 3300049669 Bacteria 6282
222 Ga0501242_002096 3300049674 Bacteria 2083
223 Ga0501257_008320 3300049686 Bacteria 2328
224 Ga0501225_0002357 3300049705 Bacteria 5824
225 Ga0501234_004843 3300049707 Bacteria 2113
226 Ga0501079_0062956 3300049741 Bacteria 2862
227 Ga0501081_0039490 3300049743 Bacteria 3229
228 Ga0501045_0014334 3300049824 Bacteria 5617
229 Ga0501045_0017776 3300049824 Bacteria 5049
230 nmdc:mga05p37_22169_c1 3300050507 Bacteria 7700
231 nmdc:mga05p37_28167_c1 3300050507 Bacteria 6848
232 nmdc:mga05p37_401_c1 3300050507 Bacteria 39417
233 nmdc:mga09592_416_c1 3300050508 Bacteria 31210
234 nmdc:mga09592_84660_c1 3300050508 Bacteria 2704
235 nmdc:mga08y16_35303_c1 3300050511 Bacteria 5251
236 nmdc:mga08y16_56937_c1 3300050511 Bacteria 4086
237 nmdc:mga0n895_16189_c1 3300050512 Bacteria 6836
238 nmdc:mga0n895_17653_c1 3300050512 Bacteria 6584
239 nmdc:mga0n895_20327_c1 3300050512 Bacteria 6190
240 nmdc:mga0rr50_7684_c1 3300050513 Bacteria 6674
241 nmdc:mga0a205_5487_c1 3300050515 Bacteria 11421
242 Ga0501084_0014157 3300054114 Bacteria 6605
243 Ga0501084_0032165 3300054114 Bacteria 4387
244 Ga0501084_0040216 3300054114 Bacteria 3910
245 Ga0501082_0012278 3300060353 Bacteria 7360
246 Ga0530510_0013755 3300061734 Bacteria 5697
247 2511177454 2510917027 Bacteria 5287437
248 2512637283 2512564013 Bacteria 6286191
249 2512729429 2512564039 Bacteria 8739048
250 2573039581 2571042588 Bacteria 5045676
251 2578334516 2576861424 Bacteria 5270569
252 2580930967 2579778775 Bacteria 5360914
253 2595319189 2593339198 Bacteria 7267884
254 2601640038 2600255286 Bacteria 5390125
255 2621272541 2619619294 Bacteria 5575484
256 2673820756 2671180694 Bacteria 7506943
257 2723601352 2721755693 Bacteria 6126117
258 2730137476 2728369359 Bacteria 5621728
259 2738839979 2738541299 Bacteria 4020721
260 2745167486 2744054657 Bacteria 5016802
261 2753812610 2751185905 Bacteria 6142767
262 2791211301 2788500588 Bacteria 4584915
263 2802437438 2802428803 Bacteria 5806948
264 2817616277 2816332336 Bacteria 5207640
265 2819627722 2818991451 Bacteria 4697364
266 2831907939 2831905167 Bacteria 3319172
267 2852676365 2852673933 Bacteria 3347676
268 2857458790 2857453340 Bacteria 8090534
269 2857465087 2857460504 Bacteria 5194327
270 2857468824 2857465823 Bacteria 6772595
271 2864998343 2864997549 Bacteria 5139696
272 2881638992 2881636855 Bacteria 5205297
273 2889277445 2889276214 Bacteria 5979355
274 2889299276 2889295896 Bacteria 4704906
275 2898908244 2898907183 Bacteria 4067722
276 2904600501 2904595352 Bacteria 6124848
277 2904609956 2904606771 Bacteria 4684500
278 2907206791 2907202186 Bacteria 6632024
279 2915598418 2915597211 Bacteria 6475886
280 2915612539 2915606848 Bacteria 6032732
281 2919430312 2919425241 Bacteria 8055701
282 2928513338 2928510474 Bacteria 4815308
283 2929183555 2929183550 Bacteria 6377511
284 2929206912 2929206907 Bacteria 5918291
285 2929298860 2929297113 Bacteria 3141306
286 2939597113 2939593269 Bacteria 4798695
287 2939703400 2939702853 Bacteria 5139229
288 2971409812 2971403814 Bacteria 7370929
289 2971513986 2971511577 Bacteria 5404012
290 2980129210 2980125574 Bacteria 5567337
291 2980178799 2980176882 Bacteria 5397533
292 2981288333 2981284811 Bacteria 4641497
293 2981293154 2981289755 Bacteria 4641509
294 2981984160 2981980479 Bacteria 4641628
295 2981989085 2981985349 Bacteria 4641497
296 2984531959 2984527788 Bacteria 5288478
297 2984533213 2984532647 Bacteria 5288506
298 2988229428 2988225383 Bacteria 7221625
299 2996708070 2996706504 Bacteria 5757485
300 3001270438 3001267043 Bacteria 4823521
301 3001275790 3001272096 Bacteria 4729684
302 3006969896 3006969106 Bacteria 4739423
303 3006990108 3006988479 Bacteria 4767936
304 648167938 648028048 Bacteria 5394884
305 8054803407 8054795415 Bacteria 9785225
306 8055531792 8055531788 Bacteria 5249694
307 Ga0070703_10000002
308 JGI25151J46595_10007088
309 Ga0006562J51391_1007631
310 Ga0006562J51391_1008302
311 Ga0055538_1000320
312 Ga0055538_1000734
313 Ga0055532_1003176
314 Ga0055541_1000328
315 Ga0070683_100022197
316 Ga0070670_100003956
317 Ga0070670_100023783
318 Ga0070670_100067138
319 Ga0070680_100002085
320 Ga0070691_10000572
321 Ga0070692_10020468
322 Ga0070673_100093466
323 Ga0070673_100103567
324 Ga0070711_100002530
325 Ga0070711_100059256
326 Ga0070708_100001690
327 Ga0070662_100000879
328 Ga0068867_100026533
329 Ga0070706_100002631
330 Ga0070707_100047934
331 Ga0070698_100007651
332 Ga0070698_100013934
333 Ga0070698_100058278
334 Ga0070699_100004034
335 Ga0070699_100071771
336 Ga0070684_100005873
337 Ga0070697_100005299
338 Ga0070672_100019817
339 Ga0070686_100000031
340 Ga0070696_100003874
341 Ga0070696_100007739
342 Ga0070704_100005752
343 Ga0070704_100034667
344 Ga0068852_100039178
345 Ga0068861_100068289
346 Ga0068870_10001013
347 Ga0068863_100002225
348 Ga0081455_10002054
349 Ga0081455_10009902
350 Ga0081455_10014291
351 Ga0081455_10019254
352 Ga0081539_10005857
353 Ga0081539_10016867
354 Ga0081539_10030597
355 Ga0070712_100004694
356 Ga0075428_100028662
357 Ga0075428_100034772
358 Ga0075430_100000430
359 Ga0075431_100015957
360 Ga0075431_100061696
361 Ga0075433_10003715
362 Ga0075433_10014406
363 Ga0075434_100003249
364 Ga0075434_100013428
365 Ga0075434_100034136
366 Ga0075434_100054919
367 Ga0075429_100002843
368 Ga0075429_100029131
369 Ga0075429_100034818
370 Ga0105251_10012332
371 Ga0105244_10000045
372 Ga0111539_10020304
373 Ga0111539_10040621
374 Ga0111539_10077645
375 Ga0114129_10000809
376 Ga0114129_10017181
377 Ga0114129_10030017
378 Ga0114129_10183917
379 Ga0105243_10019544
380 Ga0105242_10011225
381 Ga0105248_10018956
382 Ga0105238_10000254
383 Ga0105238_10032310
384 Ga0105249_10013399
385 Ga0105249_10027035
386 Ga0157371_10002410
387 Ga0157371_10037912
388 Ga0157378_10002162
389 Ga0157378_10044093
390 Ga0209784_100044
391 Ga0209784_100157
392 Ga0209566_100321
393 Ga0209258_101759
394 Ga0209025_1004814
395 Ga0209025_1011179
396 Ga0209025_1011258
397 Ga0209025_1026402
398 Ga0207655_1000174
399 Ga0207653_10000001
400 Ga0207642_10006666
401 Ga0207643_10000826
402 Ga0207684_10000078
403 Ga0207707_10027862
404 Ga0207646_10007252
405 Ga0207646_10047768
406 Ga0207694_10000096
407 Ga0207650_10059528
408 Ga0207650_10079982
409 Ga0207659_10057086
410 Ga0207706_10002183
411 Ga0207691_10001317
412 Ga0207711_10006249
413 Ga0207661_10014296
414 Ga0207651_10019840
415 Ga0207678_10017973
416 Ga0207708_10005966
417 Ga0207641_10034055
418 Ga0207648_10032754
419 Ga0207674_10000174
420 Ga0207675_100064952
421 Ga0209966_1001008
422 Ga0207428_10000842
423 Ga0207428_10022378
424 Ga0207428_10032303
425 Ga0265332_10015149
426 Ga0265314_10051407
427 Ga0307412_10023251
428 Ga0307416_100081428
429 Ga0373959_0000057
430 Ga0373926_0000234
431 Ga0373944_0000078
432 Ga0373923_0001975
433 Ga0373936_0000272
434 Ga0373939_0009166
435 Ga0373946_0000276
436 Ga0316574_0025585
437 Ga0373931_0015587
438 Ga0316584_0051628
439 Ga0395899_0001100
440 Ga0395899_0086152
441 Ga0395900_0001548
442 Ga0395900_0005526
443 Ga0395900_0054023
444 Ga0395898_0001477
445 Ga0395898_0072100
446 Ga0395898_0206560
447 Ga0395901_0001185
448 Ga0395901_0004248
449 Ga0395901_0030648
450 Ga0395901_0047415
451 Ga0395901_0062837
452 Ga0451577_0000001
453 Ga0453684_0001438
454 Ga0453684_0008265
455 Ga0453684_0084117
456 Ga0451576_0186882
457 Ga0495603_0024020
458 Ga0495603_0026122
459 Ga0495580_0010893
460 Ga0495580_0020119
461 Ga0495582_0012600
462 Ga0495639_0004533
463 Ga0495594_0031748
464 Ga0495618_0041716
465 Ga0495631_0025802
466 Ga0495644_0023494
467 Ga0495665_0003134
468 Ga0495640_0005181
469 Ga0495586_0008914
470 Ga0495598_0001941
471 Ga0495633_0037562
472 Ga0495667_0043609
473 Ga0495635_0010018
474 Ga0495659_0007344
475 Ga0495661_0059067
476 Ga0495658_0028762
477 Ga0495613_0023401
478 Ga0495624_0004136
479 Ga0495670_0024861
480 Ga0495581_0004013
481 Ga0495614_0012396
482 Ga0496101_0023405
483 Ga0496102_0039719
484 Ga0496103_0016787
485 Ga0496106_0006558
486 Ga0496107_0006766
487 Ga0496107_0055599
488 Ga0496108_0021071
489 Ga0496109_0005113
490 Ga0496109_0022830
491 Ga0496110_0019093
492 Ga0496110_0023933
493 Ga0496110_0049384
494 Ga0496114_0003161
495 Ga0496116_0006013
496 Ga0496116_0030900
497 Ga0496117_0008862
498 Ga0496119_0002345
499 Ga0496119_0034716
500 Ga0496120_0005619
501 Ga0496120_0006591
502 Ga0496122_0002911
503 Ga0496122_0005119
504 Ga0496123_0040339
505 Ga0496124_0000258
506 Ga0496125_0002823
507 Ga0496125_0013093
508 Ga0501038_0041182
509 Ga0501039_0008155
510 Ga0501040_0030673
511 Ga0501041_0005890
512 Ga0501041_0030961
513 Ga0501041_0094713
514 Ga0501042_0009897
515 Ga0501042_0010048
516 Ga0501043_0027488
517 Ga0501046_0039967
518 Ga0501072_0010989
519 Ga0501072_0016752
520 Ga0501072_0038361
521 Ga0501075_0006342
522 Ga0501077_0010790
523 Ga0501077_0016667
524 Ga0501077_0017927
525 Ga0501216_000891
526 Ga0501233_002725
527 Ga0501235_000844
528 Ga0501242_002096
529 Ga0501257_008320
530 Ga0501225_0002357
531 Ga0501234_004843
532 Ga0501079_0062956
533 Ga0501081_0039490
534 Ga0501045_0014334
535 Ga0501045_0017776
536 nmdc:mga05p37_22169_c1
537 nmdc:mga05p37_28167_c1
538 nmdc:mga05p37_401_c1
539 nmdc:mga09592_416_c1
540 nmdc:mga09592_84660_c1
541 nmdc:mga08y16_35303_c1
542 nmdc:mga08y16_56937_c1
543 nmdc:mga0n895_16189_c1
544 nmdc:mga0n895_17653_c1
545 nmdc:mga0n895_20327_c1
546 nmdc:mga0rr50_7684_c1
547 nmdc:mga0a205_5487_c1
548 Ga0501084_0014157
549 Ga0501084_0032165
550 Ga0501084_0040216
551 Ga0501082_0012278
552 Ga0530510_0013755
553 2511177454
554 2512637283
555 2512729429
556 2573039581
557 2578334516
558 2580930967
559 2595319189
560 2601640038
561 2621272541
562 2673820756
563 2723601352
564 2730137476
565 2738839979
566 2745167486
567 2753812610
568 2791211301
569 2802437438
570 2817616277
571 2819627722
572 2831907939
573 2852676365
574 2857458790
575 2857465087
576 2857468824
577 2864998343
578 2881638992
579 2889277445
580 2889299276
581 2898908244
582 2904600501
583 2904609956
584 2907206791
585 2915598418
586 2915612539
587 2919430312
588 2928513338
589 2929183555
590 2929206912
591 2929298860
592 2939597113
593 2939703400
594 2971409812
595 2971513986
596 2980129210
597 2980178799
598 2981288333
599 2981293154
600 2981984160
601 2981989085
602 2984531959
603 2984533213
604 2988229428
605 2996708070
606 3001270438
607 3001275790
608 3006969896
609 3006990108
610 648167938
611 8054803407
612 8055531792

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00204

DNA_gyraseB

DNA gyrase B

260

431

0.97

PF00986

DNA_gyraseB_C

DNA gyrase B subunit, carboxyl terminus

601

663

0.97

PF01751

Toprim

Toprim domain

459

571

0.9

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

68

214

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ksg-assembly1.cif.gz_A dna gyrase atp binding domain of enterococcus faecalis in complex with a small molecule inhibitor (4-[(1s,5r,6r)-6-amino-1-methyl-3-azabicyclo[3.2.0]hept-3-yl]-6-fluoro-n-methyl-2-[(2-methylpyrimidin-5-yl)oxy]-9h-pyrimido[4,5-b]indol-8-amine) 0.9771 26 230
4uro-assembly4.cif.gz_D crystal structure of staph gyraseb 24kda in complex with novobiocin 0.977 28 228
4urn-assembly3.cif.gz_C crystal structure of staph pare 24kda in complex with novobiocin 0.9731 26 228
4uro-assembly2.cif.gz_B crystal structure of staph gyraseb 24kda in complex with novobiocin 0.9718 29 230
4bae-assembly1.cif.gz_B optimisation of pyrroleamides as mycobacterial gyrb atpase inhibitors: structure activity relationship and in vivo efficacy in the mouse model of tuberculosis 0.9711 26 228
ID Description Score Start End Superfamily
af_Q2G274_231_403_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9796 230 400 3.30.230.10
3zkbF02 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9752 230 398 3.30.230.10
4wudA02 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9654 230 400 3.30.230.10
af_C0P6Q6_309_487_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9652 230 407 3.30.230.10
af_Q2G274_231_403_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9629 230 400 3.30.230.10
ID Description Score Start End GO Terms
AF-A0A3B8ZEA2-F1-model_v4 DNA topoisomerase (ATP-hydrolyzing) (EC 5.6.2.2) 0.9865 438 553 GO:0003677
GO:0005524
GO:0006265
GO:0034335
AF-A5PG42-F1-model_v4 DNA topoisomerase (ATP-hydrolyzing) (EC 5.6.2.2) 0.9865 418 501 GO:0003677
GO:0005524
GO:0006265
GO:0034335
AF-A0A2K4FX18-F1-model_v4 DNA topoisomerase (ATP-hydrolyzing) (EC 5.6.2.2) 0.9834 417 504 GO:0003677
GO:0005524
GO:0006265
GO:0034335
AF-A0A5S8ZPL1-F1-model_v4 DNA topoisomerase (ATP-hydrolyzing) (EC 5.6.2.2) 0.9831 243 382 GO:0003677
GO:0005524
GO:0006265
GO:0034335
AF-A0A3D1STL9-F1-model_v4 DNA topoisomerase (ATP-hydrolyzing) (EC 5.6.2.2) 0.9827 409 566 GO:0003677
GO:0005524
GO:0006265
GO:0034335

Map