F398458

General Info

Members Datasets Scaffolds Average Seq Length
306 176 612 234

Family's Representative Sequence

Representative Sequence 3300005289|Ga0065704_10085357|Ga0065704_100853574
Length 270
Sequence VANAIDHETAEAPVADRVAVFPISQKQRTALPIVHRIINFIVMKTILVVDDEPKITQLVRDYLVRAGFGVLVAYDGKKALSLAKTERPDMVVLDLGLPQLDGLDFTREFRKSSNAPIIMLTARSDESDKLIGLELGADDYMTKPFSPKELVARVRVVFRRIENALSANTEMIRVTDLTLDVPRMRVTAENREIEELTPTEFELLATLARQPGRVFTRAQLLDAIHGVAFESYERAIDAHIKNIRHKIEVKTSEPQYILTVYGVGYKFADR

Samples

Sample ID Description Type Environment
1 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
7 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
8 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
44 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
46 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
63 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
65 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
66 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
67 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
68 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
69 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
70 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
71 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
72 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
73 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
74 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
75 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
76 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
77 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
78 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
82 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
83 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
84 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
85 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
88 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
89 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
91 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
94 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
95 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
96 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
97 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
98 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
99 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
100 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
101 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
104 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
105 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
106 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
107 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
108 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
109 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
110 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
111 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
112 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
113 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
114 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
117 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
120 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
121 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
122 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
123 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
124 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
125 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
126 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
127 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
132 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
133 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
134 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
136 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
137 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
141 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
142 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
143 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
146 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
147 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
151 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
152 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
153 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
154 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
155 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
156 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
159 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
160 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
161 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
162 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
163 2643221584 Caulobacter sp. Root656 Isolate Unclassified
164 2643221640 Caulobacter sp. Root342 Isolate Unclassified
165 2643221642 Caulobacter sp. Root343 Isolate Unclassified
166 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
167 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
168 2818991435 Caulobacter henricii 536 Isolate Unclassified
169 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
170 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
171 2849560528 Caulobacter zeae 410 Isolate Unclassified
172 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
173 2851153111 Caulobacter radicis 736 Isolate Unclassified
174 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
175 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
176 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.12
Metatranscriptomes 0
Isolates 5.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.84
Nodule 0
Rhizoplane 2.94
Rhizosphere 83.99
Stem 0
Stem Tuber 0
Unclassified 0.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065704_10085357 3300005289 Bacteria 3230
2 SwRhRL2b_contig_3067148 2162886007 Bacteria 6787
3 JGI25406J46586_10019645 3300003203 Bacteria 2748
4 JGI25153J46596_10027555 3300003215 Bacteria 1988
5 rootH1_10030595 3300003316 Bacteria 1735
6 Ga0055536_1000702 3300003781 Bacteria 22407
7 Ga0055536_1000730 3300003781 Bacteria 22096
8 Ga0055530_10002083 3300003791 Bacteria 13382
9 Ga0055531_10001706 3300003794 Bacteria 15755
10 Ga0065704_10004227 3300005289 Bacteria 3727
11 Ga0065704_10070211 3300005289 Bacteria 75019
12 Ga0065707_10000447 3300005295 Bacteria 51333
13 Ga0065707_10003774 3300005295 Bacteria 3699
14 Ga0065707_10108078 3300005295 Bacteria 2509
15 Ga0065707_10222537 3300005295 Bacteria 1219
16 Ga0065707_10327473 3300005295 Bacteria 955
17 Ga0070689_100026575 3300005340 Bacteria 4358
18 Ga0070692_10465943 3300005345 Bacteria 812
19 Ga0070674_100946447 3300005356 Bacteria 753
20 Ga0070703_10018730 3300005406 Bacteria 2004
21 Ga0070701_10049959 3300005438 Bacteria 2164
22 Ga0070700_100029120 3300005441 Bacteria 3290
23 Ga0070694_100027169 3300005444 Bacteria 3715
24 Ga0070694_100053186 3300005444 Bacteria 2740
25 Ga0070708_100066346 3300005445 Bacteria 3239
26 Ga0070708_100076688 3300005445 Bacteria 3019
27 Ga0070706_100000277 3300005467 Bacteria 62380
28 Ga0070706_100031175 3300005467 Bacteria 4917
29 Ga0070706_100040122 3300005467 Bacteria 4321
30 Ga0070706_100417417 3300005467 Bacteria 1249
31 Ga0070706_100599639 3300005467 Bacteria 1023
32 Ga0070707_100000268 3300005468 Bacteria 51731
33 Ga0070707_100041842 3300005468 Bacteria 4385
34 Ga0070707_100113885 3300005468 Bacteria 2624
35 Ga0070698_100015253 3300005471 Bacteria 8125
36 Ga0070698_100034219 3300005471 Bacteria 5263
37 Ga0070698_100055651 3300005471 Bacteria 4010
38 Ga0070698_100069697 3300005471 Bacteria 3529
39 Ga0070698_100263417 3300005471 Bacteria 1656
40 Ga0070698_100314895 3300005471 Bacteria 1495
41 Ga0070698_100681849 3300005471 Bacteria 969
42 Ga0070699_100002996 3300005518 Bacteria 15006
43 Ga0070699_100007177 3300005518 Bacteria 9687
44 Ga0070699_100191577 3300005518 Bacteria 1817
45 Ga0070697_100000003 3300005536 Bacteria 322584
46 Ga0070697_100073627 3300005536 Bacteria 2805
47 Ga0070697_100270163 3300005536 Bacteria 1457
48 Ga0070697_100576543 3300005536 Bacteria 988
49 Ga0070695_100140976 3300005545 Bacteria 1671
50 Ga0070695_100312155 3300005545 Bacteria 1166
51 Ga0070696_100105481 3300005546 Bacteria 2025
52 Ga0070696_100779147 3300005546 Bacteria 786
53 Ga0070704_100880835 3300005549 Bacteria 804
54 Ga0068859_100384218 3300005617 Bacteria 1499
55 Ga0068859_101190061 3300005617 Bacteria 839
56 Ga0068859_101272473 3300005617 Bacteria 810
57 Ga0068864_100029436 3300005618 Bacteria 4652
58 Ga0068864_100602667 3300005618 Bacteria 1066
59 Ga0068862_100027076 3300005844 Bacteria 4823
60 Ga0068862_100149984 3300005844 Bacteria 2075
61 Ga0068862_101039042 3300005844 Bacteria 812
62 Ga0081539_10012515 3300005985 Bacteria 6527
63 Ga0081539_10022063 3300005985 Bacteria 4226
64 Ga0075369_10004463 3300006186 Bacteria 5170
65 Ga0075428_100012718 3300006844 Bacteria 9361
66 Ga0075428_100044598 3300006844 Bacteria 4872
67 Ga0075430_100073907 3300006846 Bacteria 2858
68 Ga0075431_100007235 3300006847 Bacteria 11043
69 Ga0075433_10369499 3300006852 Bacteria 1267
70 Ga0075433_10521833 3300006852 Bacteria 1045
71 Ga0075429_100008835 3300006880 Bacteria 8760
72 Ga0075429_100062297 3300006880 Bacteria 3250
73 Ga0075429_100141269 3300006880 Bacteria 2108
74 Ga0097620_100384240 3300006931 Bacteria 1499
75 Ga0097620_101190466 3300006931 Bacteria 839
76 Ga0097620_101272463 3300006931 Bacteria 810
77 Ga0111539_10074910 3300009094 Bacteria 3988
78 Ga0111539_10218947 3300009094 Bacteria 2217
79 Ga0114129_10005431 3300009147 Bacteria 18008
80 Ga0114129_10006107 3300009147 Bacteria 17081
81 Ga0114129_10007511 3300009147 Bacteria 15526
82 Ga0114129_10017739 3300009147 Bacteria 10135
83 Ga0114129_10022500 3300009147 Bacteria 8946
84 Ga0114129_10057969 3300009147 Bacteria 5418
85 Ga0114129_10202910 3300009147 Bacteria 2684
86 Ga0114129_10732013 3300009147 Bacteria 1268
87 Ga0105243_10060737 3300009148 Bacteria 3020
88 Ga0105242_10092902 3300009176 Bacteria 2543
89 Ga0105249_10384564 3300009553 Bacteria 1430
90 Ga0105249_10605763 3300009553 Bacteria 1150
91 Ga0105249_11034360 3300009553 Bacteria 890
92 Ga0105246_10227124 3300011119 Bacteria 1467
93 Ga0157377_10344236 3300014745 Bacteria 998
94 Ga0209676_1000184 3300025292 Bacteria 143543
95 Ga0209676_1000800 3300025292 Bacteria 41512
96 Ga0209758_1000392 3300025297 Bacteria 75737
97 Ga0209050_1000548 3300025298 Bacteria 62143
98 Ga0209050_1000957 3300025298 Bacteria 37355
99 Ga0209050_1022204 3300025298 Bacteria 2280
100 Ga0209256_1006892 3300025299 Bacteria 5824
101 Ga0209051_1001458 3300025303 Bacteria 20052
102 Ga0209257_1000036 3300025304 Bacteria 616006
103 Ga0209257_1001212 3300025304 Bacteria 32386
104 Ga0209257_1005855 3300025304 Bacteria 8320
105 Ga0207653_10065045 3300025885 Bacteria 1237
106 Ga0207646_10003995 3300025922 Bacteria 16333
107 Ga0207646_10024585 3300025922 Bacteria 5517
108 Ga0207646_10060176 3300025922 Bacteria 3392
109 Ga0207686_10078326 3300025934 Bacteria 2149
110 Ga0207709_10045549 3300025935 Bacteria 2657
111 Ga0207709_10180551 3300025935 Bacteria 1490
112 Ga0207670_10376749 3300025936 Bacteria 1129
113 Ga0207689_10794365 3300025942 Bacteria 799
114 Ga0207712_10017318 3300025961 Bacteria 4678
115 Ga0207712_10493658 3300025961 Bacteria 1045
116 Ga0207708_10052430 3300026075 Bacteria 3107
117 Ga0207676_10322203 3300026095 Bacteria 1419
118 Ga0207674_10121729 3300026116 Bacteria 2576
119 Ga0207675_100137720 3300026118 Bacteria 2317
120 Ga0209968_1036643 3300027526 Bacteria 831
121 Ga0207428_10095052 3300027907 Bacteria 2309
122 Ga0268265_10180268 3300028380 Bacteria 1814
123 Ga0268265_10338130 3300028380 Bacteria 1370
124 Ga0265326_10055987 3300028558 Bacteria 1115
125 Ga0265334_10000848 3300028573 Bacteria 15297
126 Ga0265318_10007593 3300028577 Bacteria 4887
127 Ga0265323_10045723 3300028653 Bacteria 1572
128 Ga0265323_10061088 3300028653 Bacteria 1311
129 Ga0265323_10072177 3300028653 Bacteria 1178
130 Ga0265338_10047814 3300028800 Bacteria 3902
131 Ga0265330_10080883 3300031235 Unclassified 1400
132 Ga0265320_10039870 3300031240 Bacteria 2345
133 Ga0265340_10004034 3300031247 Bacteria 8249
134 Ga0316575_10053106 3300031665 Bacteria 1614
135 Ga0316579_10017344 3300031691 Bacteria 3156
136 Ga0316579_10036779 3300031691 Bacteria 2259
137 Ga0316579_10100027 3300031691 Bacteria 1388
138 Ga0316576_10018584 3300031727 Bacteria 4747
139 Ga0316576_10509249 3300031727 Bacteria 885
140 Ga0307405_10467174 3300031731 Bacteria 1004
141 Ga0316577_10008158 3300031733 Bacteria 5602
142 Ga0316577_10008744 3300031733 Bacteria 5428
143 Ga0316577_10026463 3300031733 Bacteria 3231
144 Ga0316577_10052009 3300031733 Bacteria 2285
145 Ga0316577_10148391 3300031733 Bacteria 1321
146 Ga0316577_10179131 3300031733 Bacteria 1197
147 Ga0316577_10199590 3300031733 Bacteria 1131
148 Ga0307413_10264676 3300031824 Bacteria 1284
149 Ga0307413_10386435 3300031824 Bacteria 1092
150 Ga0307407_10084381 3300031903 Bacteria 1930
151 Ga0307407_10501295 3300031903 Bacteria 890
152 Ga0307409_100399268 3300031995 Bacteria 1313
153 Ga0307416_100252795 3300032002 Bacteria 1717
154 Ga0307415_100654289 3300032126 Bacteria 942
155 Ga0307415_101031934 3300032126 Bacteria 766
156 Ga0316580_10003568 3300032139 Bacteria 4431
157 Ga0373946_0203362 3300035171 Bacteria 949
158 Ga0316574_0038268 3300035398 Bacteria 2944
159 Ga0373947_0091355 3300035725 Bacteria 1899
160 Ga0373937_0672363 3300036401 Bacteria 981
161 Ga0316582_0003130 3300036647 Bacteria 8016
162 Ga0316582_0003185 3300036647 Bacteria 7966
163 Ga0316582_0016347 3300036647 Bacteria 4266
164 Ga0316582_0072840 3300036647 Bacteria 2228
165 Ga0316582_0113131 3300036647 Bacteria 1809
166 Ga0316582_0354561 3300036647 Bacteria 1009
167 Ga0316584_0047567 3300036712 Bacteria 3204
168 Ga0316584_0112705 3300036712 Bacteria 2035
169 Ga0316584_0177754 3300036712 Bacteria 1576
170 Ga0316584_0197524 3300036712 Bacteria 1485
171 Ga0373925_0039235 3300037068 Bacteria 3503
172 Ga0395905_0212587 3300037471 Bacteria 1812
173 Ga0316581_0111035 3300037588 Bacteria 844
174 Ga0395901_0306634 3300038443 Bacteria 1645
175 Ga0400484_00375 3300038725 Bacteria 5126
176 Ga0400486_08999 3300038742 Bacteria 2640
177 Ga0451807_2154844 3300041486 Bacteria 877
178 Ga0451849_0060710 3300041505 Bacteria 1644
179 Ga0439431_0065016 3300041997 Bacteria 965
180 Ga0439459_0020169 3300042438 Bacteria 1270
181 Ga0451577_0049669 3300042876 Bacteria 3745
182 Ga0451577_0084933 3300042876 Bacteria 2824
183 Ga0451577_0111564 3300042876 Bacteria 2447
184 Ga0451577_0225047 3300042876 Bacteria 1696
185 Ga0451577_0257967 3300042876 Bacteria 1578
186 Ga0453683_0123354 3300044673 Bacteria 1631
187 Ga0453683_0209488 3300044673 Bacteria 1238
188 Ga0453683_0209566 3300044673 Bacteria 1238
189 Ga0453684_0000007 3300044712 Bacteria 1301482
190 Ga0453684_0001491 3300044712 Bacteria 66039
191 Ga0453684_0009527 3300044712 Bacteria 16975
192 Ga0453684_0010393 3300044712 Bacteria 15928
193 Ga0453684_0193310 3300044712 Bacteria 2379
194 Ga0453684_0211083 3300044712 Bacteria 2256
195 Ga0453684_0261850 3300044712 Bacteria 1980
196 Ga0453684_0294517 3300044712 Bacteria 1846
197 Ga0453684_0328008 3300044712 Bacteria 1731
198 Ga0453684_0383482 3300044712 Bacteria 1578
199 Ga0453684_0604004 3300044712 Bacteria 1202
200 Ga0453684_0770864 3300044712 Bacteria 1040
201 Ga0451576_0015695 3300045051 Bacteria 8384
202 Ga0451576_0020302 3300045051 Bacteria 7237
203 Ga0451576_0087140 3300045051 Bacteria 3247
204 Ga0495603_0226492 3300046455 Bacteria 1078
205 Ga0495629_0001415 3300046459 Bacteria 18927
206 Ga0495638_0000380 3300046460 Bacteria 55127
207 Ga0495582_0000107 3300046473 Bacteria 43458
208 Ga0495639_0004937 3300046475 Bacteria 5718
209 Ga0495662_0157669 3300046476 Bacteria 1118
210 Ga0495610_0015675 3300046512 Bacteria 4395
211 Ga0495610_0085265 3300046512 Bacteria 1442
212 Ga0495616_0000117 3300046513 Bacteria 70162
213 Ga0495630_0123419 3300046517 Bacteria 1965
214 Ga0495632_0003840 3300046519 Bacteria 10449
215 Ga0495665_0035955 3300046531 Bacteria 2644
216 Ga0495668_0000014 3300046616 Bacteria 442055
217 Ga0495668_0023549 3300046616 Bacteria 3509
218 Ga0495668_0051702 3300046616 Bacteria 2274
219 Ga0495668_0093308 3300046616 Bacteria 1648
220 Ga0495625_0054870 3300046660 Bacteria 2844
221 Ga0495625_0350291 3300046660 Bacteria 934
222 Ga0495647_0003891 3300046681 Bacteria 4816
223 Ga0495658_0000227 3300046683 Bacteria 32410
224 Ga0495658_0255757 3300046683 Bacteria 1102
225 Ga0495613_0000564 3300046689 Bacteria 30491
226 Ga0495613_0135249 3300046689 Bacteria 1764
227 Ga0495624_0270030 3300046690 Bacteria 1027
228 Ga0495660_0026378 3300046810 Bacteria 3295
229 Ga0495660_0031964 3300046810 Bacteria 2957
230 Ga0495581_0002188 3300047315 Bacteria 11021
231 Ga0495680_0465794 3300047322 Bacteria 863
232 Ga0495683_0070538 3300047323 Bacteria 1716
233 Ga0495686_0026704 3300047472 Bacteria 3777
234 Ga0495593_0046145 3300047673 Bacteria 2323
235 Ga0495614_0048784 3300048089 Bacteria 1815
236 Ga0496104_0058452 3300048907 Bacteria 3650
237 Ga0496108_0031706 3300048911 Bacteria 4387
238 Ga0496108_0124897 3300048911 Bacteria 2209
239 Ga0496109_0050081 3300048912 Bacteria 3804
240 Ga0496110_0053024 3300048913 Bacteria 3564
241 Ga0496113_0159947 3300048916 Bacteria 1780
242 Ga0496114_0277549 3300048917 Bacteria 1477
243 Ga0496114_0853585 3300048917 Bacteria 791
244 Ga0496126_0002677 3300048929 Bacteria 23541
245 Ga0501037_0534231 3300049573 Bacteria 793
246 Ga0501067_0309264 3300049583 Bacteria 880
247 Ga0501071_0536443 3300049587 Bacteria 898
248 Ga0501072_0439451 3300049588 Bacteria 1033
249 Ga0501074_0139894 3300049590 Bacteria 1732
250 Ga0501075_0176209 3300049591 Bacteria 1632
251 Ga0501075_0712109 3300049591 Bacteria 765
252 Ga0501198_035589 3300049649 Bacteria 847
253 Ga0501081_0254453 3300049743 Bacteria 1282
254 Ga0501283_008709 3300049779 Bacteria 1468
255 Ga0501045_0334625 3300049824 Bacteria 1127
256 Ga0501045_0396158 3300049824 Bacteria 1028
257 nmdc:mga05p37_12489_c1 3300050507 Bacteria 10140
258 nmdc:mga05p37_243106_c1 3300050507 Bacteria 2163
259 nmdc:mga05p37_466882_c1 3300050507 Bacteria 1457
260 nmdc:mga05p37_61493_c1 3300050507 Bacteria 4623
261 nmdc:mga05p37_63485_c1 3300050507 Bacteria 4545
262 nmdc:mga05p37_76729_c1 3300050507 Bacteria 4114
263 nmdc:mga05p37_949236_c1 3300050507 Bacteria 920
264 nmdc:mga05p37_97672_c1 3300050507 Bacteria 3618
265 nmdc:mga09592_33097_c1 3300050508 Bacteria 4312
266 nmdc:mga09592_41937_c1 3300050508 Bacteria 3850
267 nmdc:mga09592_45472_c1 3300050508 Bacteria 3698
268 nmdc:mga09592_48006_c1 3300050508 Bacteria 3599
269 nmdc:mga0qj67_305216_c1 3300050509 Bacteria 1289
270 nmdc:mga0qj67_336946_c1 3300050509 Bacteria 1220
271 nmdc:mga06r32_104124_c1 3300050510 Bacteria 2787
272 nmdc:mga06r32_461419_c1 3300050510 Bacteria 1249
273 nmdc:mga08y16_1052720_c1 3300050511 Bacteria 791
274 nmdc:mga08y16_117932_c1 3300050511 Bacteria 2763
275 nmdc:mga0n895_602908_c1 3300050512 Bacteria 1100
276 nmdc:mga0n895_66302_c1 3300050512 Bacteria 3574
277 nmdc:mga0a205_707384_c1 3300050515 Bacteria 857
278 nmdc:mga0a205_74036_c1 3300050515 Bacteria 3290
279 nmdc:mga0sz30_41220_c1 3300050516 Bacteria 1941
280 Ga0500578_0314971 3300053086 Bacteria 924
281 Ga0500608_000015 3300053122 Bacteria 83850
282 Ga0500559_0003505 3300053136 Bacteria 7689
283 Ga0500622_0051486 3300053156 Bacteria 2119
284 Ga0500622_0167467 3300053156 Bacteria 1025
285 Ga0500609_001979 3300053731 Bacteria 2952
286 Ga0501082_0242023 3300060353 Bacteria 1570
287 Ga0530510_0214803 3300061734 Bacteria 1429
288 Ga0530510_0277757 3300061734 Bacteria 1251
289 2585151714 2582581280 Bacteria 5994497
290 2585195412 2582581293 Bacteria 5907401
291 2587917864 2585428106 Bacteria 5179711
292 2643779541 2643221552 Bacteria 5708754
293 2643931105 2643221584 Bacteria 5511711
294 2644226631 2643221640 Bacteria 5258820
295 2644233899 2643221642 Bacteria 5357871
296 2738888720 2738541308 Bacteria 7020677
297 2792460738 2791355048 Bacteria 5832535
298 2819537418 2818991435 Bacteria 5433759
299 2819646520 2818991454 Bacteria 5563326
300 2843748020 2843744320 Bacteria 5659202
301 2849561459 2849560528 Bacteria 5393480
302 2849574706 2849573788 Bacteria 5421256
303 2851153607 2851153111 Bacteria 5542585
304 2857508713 2857504554 Bacteria 5369913
305 2884964308 2884960567 Bacteria 5437054
306 2898329912 2898329390 Bacteria 5168154
307 Ga0065704_10085357
308 SwRhRL2b_contig_3067148
309 JGI25406J46586_10019645
310 JGI25153J46596_10027555
311 rootH1_10030595
312 Ga0055536_1000702
313 Ga0055536_1000730
314 Ga0055530_10002083
315 Ga0055531_10001706
316 Ga0065704_10004227
317 Ga0065704_10070211
318 Ga0065707_10000447
319 Ga0065707_10003774
320 Ga0065707_10108078
321 Ga0065707_10222537
322 Ga0065707_10327473
323 Ga0070689_100026575
324 Ga0070692_10465943
325 Ga0070674_100946447
326 Ga0070703_10018730
327 Ga0070701_10049959
328 Ga0070700_100029120
329 Ga0070694_100027169
330 Ga0070694_100053186
331 Ga0070708_100066346
332 Ga0070708_100076688
333 Ga0070706_100000277
334 Ga0070706_100031175
335 Ga0070706_100040122
336 Ga0070706_100417417
337 Ga0070706_100599639
338 Ga0070707_100000268
339 Ga0070707_100041842
340 Ga0070707_100113885
341 Ga0070698_100015253
342 Ga0070698_100034219
343 Ga0070698_100055651
344 Ga0070698_100069697
345 Ga0070698_100263417
346 Ga0070698_100314895
347 Ga0070698_100681849
348 Ga0070699_100002996
349 Ga0070699_100007177
350 Ga0070699_100191577
351 Ga0070697_100000003
352 Ga0070697_100073627
353 Ga0070697_100270163
354 Ga0070697_100576543
355 Ga0070695_100140976
356 Ga0070695_100312155
357 Ga0070696_100105481
358 Ga0070696_100779147
359 Ga0070704_100880835
360 Ga0068859_100384218
361 Ga0068859_101190061
362 Ga0068859_101272473
363 Ga0068864_100029436
364 Ga0068864_100602667
365 Ga0068862_100027076
366 Ga0068862_100149984
367 Ga0068862_101039042
368 Ga0081539_10012515
369 Ga0081539_10022063
370 Ga0075369_10004463
371 Ga0075428_100012718
372 Ga0075428_100044598
373 Ga0075430_100073907
374 Ga0075431_100007235
375 Ga0075433_10369499
376 Ga0075433_10521833
377 Ga0075429_100008835
378 Ga0075429_100062297
379 Ga0075429_100141269
380 Ga0097620_100384240
381 Ga0097620_101190466
382 Ga0097620_101272463
383 Ga0111539_10074910
384 Ga0111539_10218947
385 Ga0114129_10005431
386 Ga0114129_10006107
387 Ga0114129_10007511
388 Ga0114129_10017739
389 Ga0114129_10022500
390 Ga0114129_10057969
391 Ga0114129_10202910
392 Ga0114129_10732013
393 Ga0105243_10060737
394 Ga0105242_10092902
395 Ga0105249_10384564
396 Ga0105249_10605763
397 Ga0105249_11034360
398 Ga0105246_10227124
399 Ga0157377_10344236
400 Ga0209676_1000184
401 Ga0209676_1000800
402 Ga0209758_1000392
403 Ga0209050_1000548
404 Ga0209050_1000957
405 Ga0209050_1022204
406 Ga0209256_1006892
407 Ga0209051_1001458
408 Ga0209257_1000036
409 Ga0209257_1001212
410 Ga0209257_1005855
411 Ga0207653_10065045
412 Ga0207646_10003995
413 Ga0207646_10024585
414 Ga0207646_10060176
415 Ga0207686_10078326
416 Ga0207709_10045549
417 Ga0207709_10180551
418 Ga0207670_10376749
419 Ga0207689_10794365
420 Ga0207712_10017318
421 Ga0207712_10493658
422 Ga0207708_10052430
423 Ga0207676_10322203
424 Ga0207674_10121729
425 Ga0207675_100137720
426 Ga0209968_1036643
427 Ga0207428_10095052
428 Ga0268265_10180268
429 Ga0268265_10338130
430 Ga0265326_10055987
431 Ga0265334_10000848
432 Ga0265318_10007593
433 Ga0265323_10045723
434 Ga0265323_10061088
435 Ga0265323_10072177
436 Ga0265338_10047814
437 Ga0265330_10080883
438 Ga0265320_10039870
439 Ga0265340_10004034
440 Ga0316575_10053106
441 Ga0316579_10017344
442 Ga0316579_10036779
443 Ga0316579_10100027
444 Ga0316576_10018584
445 Ga0316576_10509249
446 Ga0307405_10467174
447 Ga0316577_10008158
448 Ga0316577_10008744
449 Ga0316577_10026463
450 Ga0316577_10052009
451 Ga0316577_10148391
452 Ga0316577_10179131
453 Ga0316577_10199590
454 Ga0307413_10264676
455 Ga0307413_10386435
456 Ga0307407_10084381
457 Ga0307407_10501295
458 Ga0307409_100399268
459 Ga0307416_100252795
460 Ga0307415_100654289
461 Ga0307415_101031934
462 Ga0316580_10003568
463 Ga0373946_0203362
464 Ga0316574_0038268
465 Ga0373947_0091355
466 Ga0373937_0672363
467 Ga0316582_0003130
468 Ga0316582_0003185
469 Ga0316582_0016347
470 Ga0316582_0072840
471 Ga0316582_0113131
472 Ga0316582_0354561
473 Ga0316584_0047567
474 Ga0316584_0112705
475 Ga0316584_0177754
476 Ga0316584_0197524
477 Ga0373925_0039235
478 Ga0395905_0212587
479 Ga0316581_0111035
480 Ga0395901_0306634
481 Ga0400484_00375
482 Ga0400486_08999
483 Ga0451807_2154844
484 Ga0451849_0060710
485 Ga0439431_0065016
486 Ga0439459_0020169
487 Ga0451577_0049669
488 Ga0451577_0084933
489 Ga0451577_0111564
490 Ga0451577_0225047
491 Ga0451577_0257967
492 Ga0453683_0123354
493 Ga0453683_0209488
494 Ga0453683_0209566
495 Ga0453684_0000007
496 Ga0453684_0001491
497 Ga0453684_0009527
498 Ga0453684_0010393
499 Ga0453684_0193310
500 Ga0453684_0211083
501 Ga0453684_0261850
502 Ga0453684_0294517
503 Ga0453684_0328008
504 Ga0453684_0383482
505 Ga0453684_0604004
506 Ga0453684_0770864
507 Ga0451576_0015695
508 Ga0451576_0020302
509 Ga0451576_0087140
510 Ga0495603_0226492
511 Ga0495629_0001415
512 Ga0495638_0000380
513 Ga0495582_0000107
514 Ga0495639_0004937
515 Ga0495662_0157669
516 Ga0495610_0015675
517 Ga0495610_0085265
518 Ga0495616_0000117
519 Ga0495630_0123419
520 Ga0495632_0003840
521 Ga0495665_0035955
522 Ga0495668_0000014
523 Ga0495668_0023549
524 Ga0495668_0051702
525 Ga0495668_0093308
526 Ga0495625_0054870
527 Ga0495625_0350291
528 Ga0495647_0003891
529 Ga0495658_0000227
530 Ga0495658_0255757
531 Ga0495613_0000564
532 Ga0495613_0135249
533 Ga0495624_0270030
534 Ga0495660_0026378
535 Ga0495660_0031964
536 Ga0495581_0002188
537 Ga0495680_0465794
538 Ga0495683_0070538
539 Ga0495686_0026704
540 Ga0495593_0046145
541 Ga0495614_0048784
542 Ga0496104_0058452
543 Ga0496108_0031706
544 Ga0496108_0124897
545 Ga0496109_0050081
546 Ga0496110_0053024
547 Ga0496113_0159947
548 Ga0496114_0277549
549 Ga0496114_0853585
550 Ga0496126_0002677
551 Ga0501037_0534231
552 Ga0501067_0309264
553 Ga0501071_0536443
554 Ga0501072_0439451
555 Ga0501074_0139894
556 Ga0501075_0176209
557 Ga0501075_0712109
558 Ga0501198_035589
559 Ga0501081_0254453
560 Ga0501283_008709
561 Ga0501045_0334625
562 Ga0501045_0396158
563 nmdc:mga05p37_12489_c1
564 nmdc:mga05p37_243106_c1
565 nmdc:mga05p37_466882_c1
566 nmdc:mga05p37_61493_c1
567 nmdc:mga05p37_63485_c1
568 nmdc:mga05p37_76729_c1
569 nmdc:mga05p37_949236_c1
570 nmdc:mga05p37_97672_c1
571 nmdc:mga09592_33097_c1
572 nmdc:mga09592_41937_c1
573 nmdc:mga09592_45472_c1
574 nmdc:mga09592_48006_c1
575 nmdc:mga0qj67_305216_c1
576 nmdc:mga0qj67_336946_c1
577 nmdc:mga06r32_104124_c1
578 nmdc:mga06r32_461419_c1
579 nmdc:mga08y16_1052720_c1
580 nmdc:mga08y16_117932_c1
581 nmdc:mga0n895_602908_c1
582 nmdc:mga0n895_66302_c1
583 nmdc:mga0a205_707384_c1
584 nmdc:mga0a205_74036_c1
585 nmdc:mga0sz30_41220_c1
586 Ga0500578_0314971
587 Ga0500608_000015
588 Ga0500559_0003505
589 Ga0500622_0051486
590 Ga0500622_0167467
591 Ga0500609_001979
592 Ga0501082_0242023
593 Ga0530510_0214803
594 Ga0530510_0277757
595 2585151714
596 2585195412
597 2587917864
598 2643779541
599 2643931105
600 2644226631
601 2644233899
602 2738888720
603 2792460738
604 2819537418
605 2819646520
606 2843748020
607 2849561459
608 2849574706
609 2851153607
610 2857508713
611 2884964308
612 2898329912

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

46

155

0.98

PF00486

Trans_reg_C

Transcriptional regulatory protein, C terminal

190

267

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9853 9 129
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9801 10 126
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9797 10 126
6is2-assembly1.cif.gz_A crystal structure of staphylococcus aureus response regulator arlr receiver domain in complex with mg 0.9791 9 126
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9773 9 129
ID Description Score Start End Superfamily
af_P9WGN1_2_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9888 10 88 3.40.50.2300
af_Q9KJN4_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9875 9 88 3.40.50.2300
af_Q2G2U6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9858 10 92 3.40.50.2300
af_P69228_9_89_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9847 9 88 3.40.50.2300
af_P21866_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9828 9 88 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A2J0QTN9-F1-model_v4 deleted 0.9801 9 92
AF-A0A2A5G3C3-F1-model_v4 Two-component system response regulator 0.9768 9 121 GO:0000160
AF-A0A3N5E267-F1-model_v4 Response regulator 0.9764 9 121 GO:0000160
AF-A0A1M4YKT2-F1-model_v4 Stage 0 sporulation protein A homolog 0.9754 9 121 GO:0000160
GO:0005886
GO:0043709
GO:0052621
GO:1902201
AF-A0A7C3HKX2-F1-model_v4 Response regulator 0.9743 9 121 GO:0000160
GO:0003677

Map