F398331

General Info

Members Datasets Scaffolds Average Seq Length
305 178 610 214

Family's Representative Sequence

Representative Sequence 3300049570|Ga0501033_0124199|Ga0501033_0124199_944_1681
Length 245
Sequence VTRASLDESSLRRGVRILARRDPALAAIARQYGPPPLWAREPGFATLVHMILEQQVSLASALAVFGRLRASLPVFDAASLLALDDAAFKRVGITRQKTAYARGLASAIASNTLDLDSLALLDDTEVHAVLTRIKGIGLWTSNVYLLMALGRPDAFPASDIALMVAAHRVMKLRKRPTPERLEQLAERWRPWRAVAARLLWHFYLSEKTAASTSAGRGAIPTGRARSRDREARGSPAAAPGMRISR

Samples

Sample ID Description Type Environment
1 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
107 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
108 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
109 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
110 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
111 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
112 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
113 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
114 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
115 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
116 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
117 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
118 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
119 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
120 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
121 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
125 3300038699 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot26 Metagenome Rhizosphere
126 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
127 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
128 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
129 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
130 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
131 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
132 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
133 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
134 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
135 3300049518 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_B_5_control Metagenome Rhizosphere
136 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
137 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
138 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
149 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
150 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
151 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
152 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
153 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
154 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
155 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
156 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
157 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
158 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
159 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
160 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
161 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
162 3300049681 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_B_3_drought Metagenome Rhizosphere
163 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
164 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
165 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
166 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
167 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
168 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
169 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
172 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
175 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
176 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
177 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
178 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.62
Rhizosphere 97.38
Stem 0
Stem Tuber 0
Unclassified 20.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501033_0124199 3300049570 Bacteria 1872
2 JGI24751J29686_10000018 3300002459 Bacteria 107255
3 JGI24751J29686_10000077 3300002459 Bacteria 55718
4 Ga0065714_10064449 3300005288 Bacteria 78257
5 Ga0065704_10001430 3300005289 Bacteria 7818
6 Ga0065712_10067741 3300005290 Bacteria 78248
7 Ga0065715_10094101 3300005293 Bacteria 4443
8 Ga0065715_10204088 3300005293 Bacteria 1346
9 Ga0065707_10088800 3300005295 Bacteria 4548
10 Ga0070670_100000260 3300005331 Bacteria 47137
11 Ga0070670_100095754 3300005331 Bacteria 2554
12 Ga0068869_100361808 3300005334 Unclassified 1185
13 Ga0070682_100003162 3300005337 Bacteria 9126
14 Ga0068868_100255509 3300005338 Unclassified 1476
15 Ga0070692_10038464 3300005345 Unclassified 2438
16 Ga0070675_100193109 3300005354 Bacteria 1765
17 Ga0070673_100329751 3300005364 Bacteria 1350
18 Ga0070673_101018043 3300005364 Unclassified 772
19 Ga0070703_10002705 3300005406 Bacteria 5089
20 Ga0070701_10035759 3300005438 Unclassified 2498
21 Ga0070705_100004084 3300005440 Bacteria 7131
22 Ga0070705_100209143 3300005440 Bacteria 1343
23 Ga0070700_100023632 3300005441 Bacteria 3597
24 Ga0070694_100007740 3300005444 Bacteria 6556
25 Ga0070694_100034861 3300005444 Bacteria 3322
26 Ga0070694_100322891 3300005444 Bacteria 1188
27 Ga0070708_100000002 3300005445 Bacteria 195857
28 Ga0070708_100010614 3300005445 Bacteria 7467
29 Ga0070708_100117762 3300005445 Bacteria 2447
30 Ga0070681_10031896 3300005458 Bacteria 5289
31 Ga0070681_10712230 3300005458 Unclassified 920
32 Ga0070706_100012213 3300005467 Bacteria 7961
33 Ga0070706_100365208 3300005467 Unclassified 1345
34 Ga0070707_100724223 3300005468 Unclassified 958
35 Ga0070698_100026663 3300005471 Bacteria 6012
36 Ga0070699_100005529 3300005518 Bacteria 11074
37 Ga0070699_100153701 3300005518 Bacteria 2036
38 Ga0070699_100382549 3300005518 Bacteria 1271
39 Ga0070697_100006584 3300005536 Bacteria 9004
40 Ga0070697_100206115 3300005536 Bacteria 1673
41 Ga0068853_100048217 3300005539 Bacteria 3658
42 Ga0070695_100114359 3300005545 Bacteria 1837
43 Ga0070695_100328967 3300005545 Bacteria 1138
44 Ga0070696_100048094 3300005546 Bacteria 2960
45 Ga0070696_100156070 3300005546 Bacteria 1679
46 Ga0070696_100322783 3300005546 Bacteria 1189
47 Ga0070693_100000903 3300005547 Bacteria 13222
48 Ga0070693_100002530 3300005547 Bacteria 8427
49 Ga0070704_100018650 3300005549 Unclassified 4442
50 Ga0070704_100025661 3300005549 Bacteria 3883
51 Ga0070704_100455232 3300005549 Unclassified 1103
52 Ga0070664_100265572 3300005564 Bacteria 1545
53 Ga0070664_100760589 3300005564 Unclassified 905
54 Ga0070702_100006571 3300005615 Bacteria 5514
55 Ga0068852_101241206 3300005616 Unclassified 767
56 Ga0068859_100024198 3300005617 Bacteria 6093
57 Ga0068859_100145248 3300005617 Bacteria 2447
58 Ga0068859_100165966 3300005617 Bacteria 2288
59 Ga0068859_100510141 3300005617 Bacteria 1298
60 Ga0068864_100021780 3300005618 Bacteria 5369
61 Ga0068864_100117850 3300005618 Bacteria 2370
62 Ga0068861_100128346 3300005719 Bacteria 2055
63 Ga0068851_10001871 3300005834 Bacteria 9248
64 Ga0068863_100072102 3300005841 Bacteria 3268
65 Ga0068863_100243864 3300005841 Bacteria 1734
66 Ga0068863_100633650 3300005841 Unclassified 1059
67 Ga0068858_100115804 3300005842 Bacteria 2505
68 Ga0068860_100021560 3300005843 Bacteria 6238
69 Ga0068860_100153465 3300005843 Bacteria 2219
70 Ga0081539_10000390 3300005985 Bacteria 94524
71 Ga0097621_100007513 3300006237 Bacteria 7803
72 Ga0068871_100003157 3300006358 Bacteria 11318
73 Ga0068871_100165562 3300006358 Bacteria 1892
74 Ga0068871_100925678 3300006358 Unclassified 809
75 Ga0075428_100073098 3300006844 Bacteria 3744
76 Ga0075433_10038835 3300006852 Bacteria 4113
77 Ga0075433_10302552 3300006852 Bacteria 1416
78 Ga0075434_100095422 3300006871 Bacteria 2980
79 Ga0075434_100115122 3300006871 Bacteria 2701
80 Ga0075429_100595020 3300006880 Bacteria 969
81 Ga0097620_100024197 3300006931 Bacteria 6093
82 Ga0097620_100088375 3300006931 Bacteria 3148
83 Ga0097620_100126262 3300006931 Unclassified 2627
84 Ga0097620_100145253 3300006931 Bacteria 2447
85 Ga0097620_100165964 3300006931 Bacteria 2288
86 Ga0097620_100510145 3300006931 Bacteria 1298
87 Ga0105240_10030750 3300009093 Bacteria 6974
88 Ga0111539_10036664 3300009094 Bacteria 5926
89 Ga0111539_10071379 3300009094 Bacteria 4097
90 Ga0105245_10674064 3300009098 Bacteria 1066
91 Ga0105247_10013770 3300009101 Bacteria 4849
92 Ga0105247_10062060 3300009101 Bacteria 2318
93 Ga0105247_10090104 3300009101 Bacteria 1945
94 Ga0114129_10013646 3300009147 Bacteria 11575
95 Ga0114129_10035246 3300009147 Bacteria 7070
96 Ga0114129_10262822 3300009147 Bacteria 2312
97 Ga0114129_10321645 3300009147 Bacteria 2056
98 Ga0114129_10460641 3300009147 Unclassified 1666
99 Ga0114129_11259855 3300009147 Bacteria 918
100 Ga0105241_10090458 3300009174 Bacteria 2414
101 Ga0105241_10284249 3300009174 Bacteria 1414
102 Ga0105241_10325911 3300009174 Bacteria 1326
103 Ga0105242_10120633 3300009176 Unclassified 2249
104 Ga0105242_10256534 3300009176 Unclassified 1578
105 Ga0105248_10006004 3300009177 Bacteria 13327
106 Ga0105248_10122200 3300009177 Bacteria 2937
107 Ga0105248_10182606 3300009177 Unclassified 2364
108 Ga0105248_10201593 3300009177 Bacteria 2242
109 Ga0105248_10735506 3300009177 Bacteria 1113
110 Ga0105237_10000623 3300009545 Bacteria 49504
111 Ga0105238_10002542 3300009551 Bacteria 18230
112 Ga0105249_10915763 3300009553 Bacteria 944
113 Ga0105239_10200873 3300010375 Bacteria 2233
114 Ga0105246_10023163 3300011119 Bacteria 4015
115 Ga0105246_10033557 3300011119 Bacteria 3413
116 Ga0105246_10420759 3300011119 Bacteria 1115
117 Ga0105246_10529480 3300011119 Unclassified 1006
118 Ga0157373_10271326 3300013100 Bacteria 1201
119 Ga0157373_10424522 3300013100 Unclassified 955
120 Ga0157374_11036690 3300013296 Unclassified 840
121 Ga0157378_10504329 3300013297 Bacteria 1209
122 Ga0163162_10158212 3300013306 Unclassified 2386
123 Ga0163162_10164415 3300013306 Unclassified 2342
124 Ga0163162_10600989 3300013306 Bacteria 1226
125 Ga0163162_10605943 3300013306 Bacteria 1221
126 Ga0157372_10014764 3300013307 Bacteria 8359
127 Ga0157375_10686220 3300013308 Unclassified 1178
128 Ga0163163_10056156 3300014325 Bacteria 3892
129 Ga0157380_10266372 3300014326 Bacteria 1559
130 Ga0157380_10406616 3300014326 Bacteria 1293
131 Ga0157380_10891615 3300014326 Unclassified 915
132 Ga0157379_10198600 3300014968 Bacteria 1813
133 Ga0207656_10001604 3300025321 Bacteria 7526
134 Ga0207653_10001775 3300025885 Bacteria 6897
135 Ga0207653_10144962 3300025885 Unclassified 871
136 Ga0207710_10042795 3300025900 Bacteria 2013
137 Ga0207647_10031582 3300025904 Unclassified 3407
138 Ga0207647_10133350 3300025904 Bacteria 1459
139 Ga0207643_10008702 3300025908 Bacteria 5443
140 Ga0207643_10092664 3300025908 Bacteria 1763
141 Ga0207684_10039002 3300025910 Unclassified 4031
142 Ga0207684_10078030 3300025910 Bacteria 2816
143 Ga0207654_10039539 3300025911 Bacteria 2653
144 Ga0207654_10389567 3300025911 Unclassified 967
145 Ga0207654_10446673 3300025911 Bacteria 906
146 Ga0207707_10015227 3300025912 Bacteria 6696
147 Ga0207707_10616303 3300025912 Bacteria 917
148 Ga0207695_10149066 3300025913 Unclassified 2280
149 Ga0207671_10001989 3300025914 Bacteria 22543
150 Ga0207646_10054120 3300025922 Bacteria 3590
151 Ga0207646_10311386 3300025922 Bacteria 1422
152 Ga0207646_10550414 3300025922 Bacteria 1037
153 Ga0207681_10012858 3300025923 Bacteria 5176
154 Ga0207681_10367043 3300025923 Bacteria 1156
155 Ga0207694_10055091 3300025924 Bacteria 3087
156 Ga0207650_10000080 3300025925 Bacteria 129319
157 Ga0207650_10551360 3300025925 Unclassified 966
158 Ga0207650_10963404 3300025925 Bacteria 725
159 Ga0207690_10737407 3300025932 Bacteria 811
160 Ga0207709_10005327 3300025935 Bacteria 7314
161 Ga0207709_10136694 3300025935 Bacteria 1679
162 Ga0207665_10036353 3300025939 Bacteria 3275
163 Ga0207711_10010642 3300025941 Bacteria 7651
164 Ga0207711_10064849 3300025941 Unclassified 3156
165 Ga0207711_10140436 3300025941 Unclassified 2173
166 Ga0207711_10281703 3300025941 Bacteria 1531
167 Ga0207689_10377532 3300025942 Bacteria 1180
168 Ga0207689_10438093 3300025942 Unclassified 1091
169 Ga0207679_10062498 3300025945 Unclassified 2775
170 Ga0207679_10796960 3300025945 Unclassified 861
171 Ga0207651_10482396 3300025960 Bacteria 1069
172 Ga0207651_10651023 3300025960 Bacteria 925
173 Ga0207640_10262791 3300025981 Unclassified 1346
174 Ga0207703_10190635 3300026035 Bacteria 1815
175 Ga0207703_10696483 3300026035 Unclassified 966
176 Ga0207703_10722196 3300026035 Bacteria 948
177 Ga0207639_10706659 3300026041 Bacteria 935
178 Ga0207708_10000063 3300026075 Bacteria 87390
179 Ga0207708_10034250 3300026075 Bacteria 3862
180 Ga0207708_10064104 3300026075 Bacteria 2807
181 Ga0207708_10066024 3300026075 Bacteria 2766
182 Ga0207708_10310529 3300026075 Bacteria 1285
183 Ga0207708_10365596 3300026075 Bacteria 1187
184 Ga0207702_10400390 3300026078 Unclassified 1324
185 Ga0207641_10083415 3300026088 Unclassified 2780
186 Ga0207641_10276750 3300026088 Bacteria 1577
187 Ga0207648_10035316 3300026089 Unclassified 4404
188 Ga0207648_10219137 3300026089 Bacteria 1691
189 Ga0207648_11086346 3300026089 Bacteria 750
190 Ga0207676_10066018 3300026095 Unclassified 2883
191 Ga0207676_11122931 3300026095 Unclassified 777
192 Ga0207674_10208585 3300026116 Bacteria 1903
193 Ga0207674_10326872 3300026116 Bacteria 1483
194 Ga0207674_11214449 3300026116 Unclassified 723
195 Ga0207698_10909333 3300026142 Bacteria 887
196 Ga0207698_10953613 3300026142 Bacteria 867
197 Ga0207428_10034361 3300027907 Bacteria 4156
198 Ga0268265_10226669 3300028380 Bacteria 1639
199 Ga0268264_10048231 3300028381 Bacteria 3542
200 Ga0268264_10247449 3300028381 Unclassified 1654
201 Ga0307405_10263054 3300031731 Bacteria 1290
202 Ga0307405_10332384 3300031731 Unclassified 1165
203 Ga0307410_10119897 3300031852 Bacteria 1917
204 Ga0307406_10272315 3300031901 Bacteria 1287
205 Ga0307406_10425079 3300031901 Unclassified 1059
206 Ga0307407_10116256 3300031903 Bacteria 1688
207 Ga0307412_10077586 3300031911 Unclassified 2285
208 Ga0307409_100502219 3300031995 Unclassified 1181
209 Ga0307416_100206701 3300032002 Bacteria 1868
210 Ga0307414_10113469 3300032004 Bacteria 2068
211 Ga0307411_10076657 3300032005 Bacteria 2286
212 Ga0307411_10265149 3300032005 Bacteria 1359
213 Ga0307415_100255443 3300032126 Bacteria 1427
214 Ga0373940_0048977 3300035088 Bacteria 1182
215 Ga0373951_0016087 3300035091 Bacteria 1687
216 Ga0373952_0021246 3300035092 Bacteria 1369
217 Ga0373932_0244661 3300035112 Bacteria 653
218 Ga0373942_0004553 3300035207 Bacteria 3216
219 Ga0373942_0110457 3300035207 Bacteria 850
220 Ga0395899_0329255 3300037312 Bacteria 1027
221 Ga0395900_0398647 3300037418 Bacteria 1341
222 Ga0395898_0328206 3300037466 Bacteria 1459
223 Ga0395901_0100728 3300038443 Bacteria 3031
224 Ga0395901_0139521 3300038443 Bacteria 2548
225 Ga0242422_00377 3300038699 Bacteria 2753
226 Ga0242420_008578 3300038996 Bacteria 1662
227 Ga0439446_0064876 3300042156 Bacteria 1109
228 Ga0439458_0002671 3300042157 Bacteria 4304
229 Ga0496106_0078878 3300048909 Unclassified 2528
230 Ga0496106_0636049 3300048909 Unclassified 853
231 Ga0496108_0140062 3300048911 Bacteria 2084
232 Ga0496108_0549827 3300048911 Bacteria 1007
233 Ga0496111_0623133 3300048914 Unclassified 789
234 Ga0496112_0587265 3300048915 Unclassified 1046
235 Ga0496112_0777365 3300048915 Unclassified 883
236 Ga0496113_0256417 3300048916 Bacteria 1397
237 Ga0501291_002126 3300049514 Bacteria 2348
238 Ga0501295_015830 3300049518 Bacteria 1298
239 Ga0501296_001120 3300049519 Bacteria 2686
240 Ga0501298_000305 3300049521 Bacteria 6479
241 Ga0501298_004642 3300049521 Bacteria 2174
242 Ga0501031_0110384 3300049568 Bacteria 1796
243 Ga0501033_0453548 3300049570 Bacteria 890
244 Ga0501037_0318193 3300049573 Bacteria 1078
245 Ga0501038_0002623 3300049574 Bacteria 16804
246 Ga0501039_0066463 3300049575 Bacteria 2799
247 Ga0501040_0074348 3300049576 Bacteria 2348
248 Ga0501040_0192259 3300049576 Bacteria 1448
249 Ga0501041_0234535 3300049577 Bacteria 1152
250 Ga0501042_0194131 3300049578 Bacteria 1464
251 Ga0501043_0074957 3300049579 Bacteria 2658
252 Ga0501046_0055499 3300049580 Bacteria 3112
253 Ga0501046_0230555 3300049580 Bacteria 1368
254 Ga0501048_0092494 3300049582 Bacteria 2133
255 Ga0501068_0175123 3300049584 Unclassified 1355
256 Ga0501068_0187924 3300049584 Bacteria 1308
257 Ga0501070_0065709 3300049586 Bacteria 3004
258 Ga0501071_0003012 3300049587 Bacteria 10428
259 Ga0501071_0046616 3300049587 Bacteria 3113
260 Ga0501071_0598834 3300049587 Bacteria 847
261 Ga0501072_0118611 3300049588 Bacteria 2108
262 Ga0501072_0571520 3300049588 Bacteria 892
263 Ga0501073_0550251 3300049589 Bacteria 797
264 Ga0501075_0134068 3300049591 Bacteria 1886
265 Ga0501075_0168763 3300049591 Bacteria 1669
266 Ga0501076_0010479 3300049592 Bacteria 6881
267 Ga0501076_0020568 3300049592 Bacteria 5052
268 Ga0501201_005184 3300049651 Unclassified 1216
269 Ga0501202_000839 3300049652 Bacteria 4661
270 Ga0501217_008479 3300049661 Bacteria 2221
271 Ga0501217_089541 3300049661 Unclassified 862
272 Ga0501233_024109 3300049668 Bacteria 1328
273 Ga0501235_004438 3300049669 Bacteria 3032
274 Ga0501235_012663 3300049669 Bacteria 1856
275 Ga0501235_021289 3300049669 Unclassified 1441
276 Ga0501242_031244 3300049674 Unclassified 722
277 Ga0501249_010230 3300049679 Bacteria 1958
278 Ga0501251_005646 3300049681 Bacteria 1335
279 Ga0501259_022050 3300049688 Bacteria 1142
280 Ga0501079_0074154 3300049741 Bacteria 2630
281 Ga0501080_0173253 3300049742 Bacteria 1989
282 Ga0501080_0181317 3300049742 Bacteria 1937
283 Ga0501081_0055810 3300049743 Bacteria 2729
284 Ga0501081_0074196 3300049743 Bacteria 2373
285 Ga0501083_0224035 3300049744 Bacteria 1225
286 Ga0501268_039017 3300049765 Unclassified 888
287 Ga0501035_0168335 3300049822 Bacteria 1894
288 Ga0501045_0004692 3300049824 Bacteria 9439
289 Ga0501212_003585 3300049851 Unclassified 1957
290 nmdc:mga05p37_264573_c1 3300050507 Bacteria 2056
291 nmdc:mga05p37_351024_c1 3300050507 Bacteria 1737
292 nmdc:mga05p37_494469_c1 3300050507 Bacteria 1405
293 nmdc:mga05p37_547891_c1 3300050507 Bacteria 1317
294 nmdc:mga05p37_608447_c1 3300050507 Bacteria 1232
295 nmdc:mga08y16_112880_c1 3300050511 Bacteria 2829
296 nmdc:mga08y16_15429_c1 3300050511 Bacteria 8034
297 nmdc:mga0n895_131830_c1 3300050512 Bacteria 2524
298 nmdc:mga0n895_92118_c1 3300050512 Bacteria 3034
299 nmdc:mga0n895_95159_c1 3300050512 Bacteria 2983
300 nmdc:mga0rr50_102919_c1 3300050513 Unclassified 2247
301 nmdc:mga0a205_29488_c1 3300050515 Bacteria 5251
302 nmdc:mga0a205_55927_c1 3300050515 Bacteria 3810
303 Ga0501084_0064902 3300054114 Bacteria 3054
304 Ga0530510_0021131 3300061734 Bacteria 4630
305 Ga0530510_0061616 3300061734 Bacteria 2716
306 Ga0501033_0124199
307 JGI24751J29686_10000018
308 JGI24751J29686_10000077
309 Ga0065714_10064449
310 Ga0065704_10001430
311 Ga0065712_10067741
312 Ga0065715_10094101
313 Ga0065715_10204088
314 Ga0065707_10088800
315 Ga0070670_100000260
316 Ga0070670_100095754
317 Ga0068869_100361808
318 Ga0070682_100003162
319 Ga0068868_100255509
320 Ga0070692_10038464
321 Ga0070675_100193109
322 Ga0070673_100329751
323 Ga0070673_101018043
324 Ga0070703_10002705
325 Ga0070701_10035759
326 Ga0070705_100004084
327 Ga0070705_100209143
328 Ga0070700_100023632
329 Ga0070694_100007740
330 Ga0070694_100034861
331 Ga0070694_100322891
332 Ga0070708_100000002
333 Ga0070708_100010614
334 Ga0070708_100117762
335 Ga0070681_10031896
336 Ga0070681_10712230
337 Ga0070706_100012213
338 Ga0070706_100365208
339 Ga0070707_100724223
340 Ga0070698_100026663
341 Ga0070699_100005529
342 Ga0070699_100153701
343 Ga0070699_100382549
344 Ga0070697_100006584
345 Ga0070697_100206115
346 Ga0068853_100048217
347 Ga0070695_100114359
348 Ga0070695_100328967
349 Ga0070696_100048094
350 Ga0070696_100156070
351 Ga0070696_100322783
352 Ga0070693_100000903
353 Ga0070693_100002530
354 Ga0070704_100018650
355 Ga0070704_100025661
356 Ga0070704_100455232
357 Ga0070664_100265572
358 Ga0070664_100760589
359 Ga0070702_100006571
360 Ga0068852_101241206
361 Ga0068859_100024198
362 Ga0068859_100145248
363 Ga0068859_100165966
364 Ga0068859_100510141
365 Ga0068864_100021780
366 Ga0068864_100117850
367 Ga0068861_100128346
368 Ga0068851_10001871
369 Ga0068863_100072102
370 Ga0068863_100243864
371 Ga0068863_100633650
372 Ga0068858_100115804
373 Ga0068860_100021560
374 Ga0068860_100153465
375 Ga0081539_10000390
376 Ga0097621_100007513
377 Ga0068871_100003157
378 Ga0068871_100165562
379 Ga0068871_100925678
380 Ga0075428_100073098
381 Ga0075433_10038835
382 Ga0075433_10302552
383 Ga0075434_100095422
384 Ga0075434_100115122
385 Ga0075429_100595020
386 Ga0097620_100024197
387 Ga0097620_100088375
388 Ga0097620_100126262
389 Ga0097620_100145253
390 Ga0097620_100165964
391 Ga0097620_100510145
392 Ga0105240_10030750
393 Ga0111539_10036664
394 Ga0111539_10071379
395 Ga0105245_10674064
396 Ga0105247_10013770
397 Ga0105247_10062060
398 Ga0105247_10090104
399 Ga0114129_10013646
400 Ga0114129_10035246
401 Ga0114129_10262822
402 Ga0114129_10321645
403 Ga0114129_10460641
404 Ga0114129_11259855
405 Ga0105241_10090458
406 Ga0105241_10284249
407 Ga0105241_10325911
408 Ga0105242_10120633
409 Ga0105242_10256534
410 Ga0105248_10006004
411 Ga0105248_10122200
412 Ga0105248_10182606
413 Ga0105248_10201593
414 Ga0105248_10735506
415 Ga0105237_10000623
416 Ga0105238_10002542
417 Ga0105249_10915763
418 Ga0105239_10200873
419 Ga0105246_10023163
420 Ga0105246_10033557
421 Ga0105246_10420759
422 Ga0105246_10529480
423 Ga0157373_10271326
424 Ga0157373_10424522
425 Ga0157374_11036690
426 Ga0157378_10504329
427 Ga0163162_10158212
428 Ga0163162_10164415
429 Ga0163162_10600989
430 Ga0163162_10605943
431 Ga0157372_10014764
432 Ga0157375_10686220
433 Ga0163163_10056156
434 Ga0157380_10266372
435 Ga0157380_10406616
436 Ga0157380_10891615
437 Ga0157379_10198600
438 Ga0207656_10001604
439 Ga0207653_10001775
440 Ga0207653_10144962
441 Ga0207710_10042795
442 Ga0207647_10031582
443 Ga0207647_10133350
444 Ga0207643_10008702
445 Ga0207643_10092664
446 Ga0207684_10039002
447 Ga0207684_10078030
448 Ga0207654_10039539
449 Ga0207654_10389567
450 Ga0207654_10446673
451 Ga0207707_10015227
452 Ga0207707_10616303
453 Ga0207695_10149066
454 Ga0207671_10001989
455 Ga0207646_10054120
456 Ga0207646_10311386
457 Ga0207646_10550414
458 Ga0207681_10012858
459 Ga0207681_10367043
460 Ga0207694_10055091
461 Ga0207650_10000080
462 Ga0207650_10551360
463 Ga0207650_10963404
464 Ga0207690_10737407
465 Ga0207709_10005327
466 Ga0207709_10136694
467 Ga0207665_10036353
468 Ga0207711_10010642
469 Ga0207711_10064849
470 Ga0207711_10140436
471 Ga0207711_10281703
472 Ga0207689_10377532
473 Ga0207689_10438093
474 Ga0207679_10062498
475 Ga0207679_10796960
476 Ga0207651_10482396
477 Ga0207651_10651023
478 Ga0207640_10262791
479 Ga0207703_10190635
480 Ga0207703_10696483
481 Ga0207703_10722196
482 Ga0207639_10706659
483 Ga0207708_10000063
484 Ga0207708_10034250
485 Ga0207708_10064104
486 Ga0207708_10066024
487 Ga0207708_10310529
488 Ga0207708_10365596
489 Ga0207702_10400390
490 Ga0207641_10083415
491 Ga0207641_10276750
492 Ga0207648_10035316
493 Ga0207648_10219137
494 Ga0207648_11086346
495 Ga0207676_10066018
496 Ga0207676_11122931
497 Ga0207674_10208585
498 Ga0207674_10326872
499 Ga0207674_11214449
500 Ga0207698_10909333
501 Ga0207698_10953613
502 Ga0207428_10034361
503 Ga0268265_10226669
504 Ga0268264_10048231
505 Ga0268264_10247449
506 Ga0307405_10263054
507 Ga0307405_10332384
508 Ga0307410_10119897
509 Ga0307406_10272315
510 Ga0307406_10425079
511 Ga0307407_10116256
512 Ga0307412_10077586
513 Ga0307409_100502219
514 Ga0307416_100206701
515 Ga0307414_10113469
516 Ga0307411_10076657
517 Ga0307411_10265149
518 Ga0307415_100255443
519 Ga0373940_0048977
520 Ga0373951_0016087
521 Ga0373952_0021246
522 Ga0373932_0244661
523 Ga0373942_0004553
524 Ga0373942_0110457
525 Ga0395899_0329255
526 Ga0395900_0398647
527 Ga0395898_0328206
528 Ga0395901_0100728
529 Ga0395901_0139521
530 Ga0242422_00377
531 Ga0242420_008578
532 Ga0439446_0064876
533 Ga0439458_0002671
534 Ga0496106_0078878
535 Ga0496106_0636049
536 Ga0496108_0140062
537 Ga0496108_0549827
538 Ga0496111_0623133
539 Ga0496112_0587265
540 Ga0496112_0777365
541 Ga0496113_0256417
542 Ga0501291_002126
543 Ga0501295_015830
544 Ga0501296_001120
545 Ga0501298_000305
546 Ga0501298_004642
547 Ga0501031_0110384
548 Ga0501033_0453548
549 Ga0501037_0318193
550 Ga0501038_0002623
551 Ga0501039_0066463
552 Ga0501040_0074348
553 Ga0501040_0192259
554 Ga0501041_0234535
555 Ga0501042_0194131
556 Ga0501043_0074957
557 Ga0501046_0055499
558 Ga0501046_0230555
559 Ga0501048_0092494
560 Ga0501068_0175123
561 Ga0501068_0187924
562 Ga0501070_0065709
563 Ga0501071_0003012
564 Ga0501071_0046616
565 Ga0501071_0598834
566 Ga0501072_0118611
567 Ga0501072_0571520
568 Ga0501073_0550251
569 Ga0501075_0134068
570 Ga0501075_0168763
571 Ga0501076_0010479
572 Ga0501076_0020568
573 Ga0501201_005184
574 Ga0501202_000839
575 Ga0501217_008479
576 Ga0501217_089541
577 Ga0501233_024109
578 Ga0501235_004438
579 Ga0501235_012663
580 Ga0501235_021289
581 Ga0501242_031244
582 Ga0501249_010230
583 Ga0501251_005646
584 Ga0501259_022050
585 Ga0501079_0074154
586 Ga0501080_0173253
587 Ga0501080_0181317
588 Ga0501081_0055810
589 Ga0501081_0074196
590 Ga0501083_0224035
591 Ga0501268_039017
592 Ga0501035_0168335
593 Ga0501045_0004692
594 Ga0501212_003585
595 nmdc:mga05p37_264573_c1
596 nmdc:mga05p37_351024_c1
597 nmdc:mga05p37_494469_c1
598 nmdc:mga05p37_547891_c1
599 nmdc:mga05p37_608447_c1
600 nmdc:mga08y16_112880_c1
601 nmdc:mga08y16_15429_c1
602 nmdc:mga0n895_131830_c1
603 nmdc:mga0n895_92118_c1
604 nmdc:mga0n895_95159_c1
605 nmdc:mga0rr50_102919_c1
606 nmdc:mga0a205_29488_c1
607 nmdc:mga0a205_55927_c1
608 Ga0501084_0064902
609 Ga0530510_0021131
610 Ga0530510_0061616

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00730

HhH-GPD

HhH-GPD superfamily base excision DNA repair protein

48

190

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1y88-assembly1.cif.gz_A crystal structure of protein of unknown function af1548 0.9832 54 88
2h56-assembly2.cif.gz_B crystal structure of dna-3-methyladenine glycosidase (10174367) from bacillus halodurans at 2.55 a resolution 0.8923 2 180
2yg9-assembly2.cif.gz_B structure of an unusual 3-methyladenine dna glycosylase ii (alka) from deinococcus radiodurans 0.8705 3 186
4b21-assembly1.cif.gz_A unprecedented sculpting of dna at abasic sites by dna glycosylase homolog mag2 0.8458 3 178
6rlw-assembly3.cif.gz_CCC structure of the human 8-oxoguanine dna glycosylase hogg1 in complex with inhibitor th5487 0.828 2 178
ID Description Score Start End Superfamily
af_B4FZ58_120_231_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9314 20 128 1.10.340.30
af_A0A1D8PI96_136_252_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9132 21 123 1.10.340.30
1y88A02 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.9069 41 88 1.10.150.20
af_B4FZ58_120_231_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9002 20 128 1.10.340.30
2yg8A02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.8961 21 122 1.10.340.30
ID Description Score Start End GO Terms
AF-A0A1T4T5G4-F1-model_v4 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 0.9608 3 180 GO:0005737
GO:0006285
GO:0006307
GO:0008725
GO:0032131
GO:0032993
GO:0043916
AF-A0A7C8CMM6-F1-model_v4 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 0.9596 3 182 GO:0005737
GO:0006285
GO:0006307
GO:0008725
GO:0032131
GO:0032993
GO:0043916
AF-A0A1H8ND21-F1-model_v4 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 0.9596 3 180 GO:0005737
GO:0006285
GO:0006307
GO:0008725
GO:0032131
GO:0032993
GO:0043916
AF-A0A7Y4C338-F1-model_v4 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 0.9594 3 180 GO:0005737
GO:0006285
GO:0006307
GO:0008725
GO:0032131
GO:0032993
GO:0043916
AF-A0A2M7GI22-F1-model_v4 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 0.9582 3 180 GO:0005737
GO:0006285
GO:0006307
GO:0008725
GO:0032131
GO:0032993
GO:0043916

Map