F398236

General Info

Members Datasets Scaffolds Average Seq Length
305 198 237 281

Family's Representative Sequence

Representative Sequence 3300041494|Ga0451837_1241672|Ga0451837_1241672_484_1488
Length 334
Sequence MQDRSAPGRHHFCEHDTPRSRLKEKLPGTLTASGCLPLATIKEIMTMTDDTRRPTPPYPAQQQEPPGQTAAMRPVPDHGEKSYRGNGKLEGKTALITGADSGIGKAVAIAFAREGADVVISYLSEDEDANDTAKWVKHAGRKAVVIPGDIKSEDHCKMLVQRTVDELGGIDILVNNAAFQRTYADIADIDAEEWDETFRTNIYAPFFLAKAAIPHMARGSAIINTTSIQSRQPSPQLLAYASTKGAISNFTAGLAEMLSERGIRVNAVAPGPIWTPLIPSTMPAKKAAKFGENTLIGRAGQPAELAGAYVLLASDLGSYMTGAVIPVTGGEIMI

Samples

Sample ID Description Type Environment
1 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
2 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
3 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
4 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
5 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
6 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
7 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
8 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
9 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
10 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
11 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
12 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
13 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
14 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
15 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
16 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
17 2643221718 Rhizobium sp. Root268 Isolate Unclassified
18 2738541293 Rhizobium sp. GV031 Isolate Unclassified
19 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
20 2791355267 Rhizobium sp. L18 Isolate Nodule
21 2824661429 Bradyrhizobium sp. HAMBI 2115 Isolate Unclassified
22 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
23 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
24 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
25 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
26 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
27 2879099564 Bradyrhizobium japonicum UBMA197 Isolate Nodule
28 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
29 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
30 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
31 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
32 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
33 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
34 2932809354 Bradyrhizobium sp. S3.5.5 Isolate Nodule
35 2932818245 Bradyrhizobium sp. S3.9.1 Isolate Nodule
36 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
37 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
38 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
39 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
40 2935665750 Bradyrhizobium sp. JR7.2 Isolate Nodule
41 2935684952 Bradyrhizobium sp. LA3.X Isolate Nodule
42 2935713505 Bradyrhizobium sp. LA6.12 Isolate Nodule
43 2935722832 Bradyrhizobium sp. LA6.3 Isolate Nodule
44 2935732158 Bradyrhizobium sp. LA6.4 Isolate Nodule
45 2935741537 Bradyrhizobium sp. LA6.7 Isolate Nodule
46 2935750917 Bradyrhizobium sp. LA6.8 Isolate Nodule
47 2935760218 Bradyrhizobium sp. LA7.1 Isolate Nodule
48 2935801545 Bradyrhizobium sp. RT10b Isolate Nodule
49 2935810662 Bradyrhizobium sp. RT3a Isolate Nodule
50 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
51 2936037263 Bradyrhizobium sp. JR18.2 Isolate Nodule
52 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
53 2936375103 Rhizobium changzhiense WYCCWR 11317 Isolate Nodule
54 2940556831 Bradyrhizobium sp. LA8.1 Isolate Nodule
55 2996887358 Rhizobium sp. R711 Isolate Nodule
56 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
57 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
58 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
59 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
60 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
61 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
62 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
63 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
64 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
65 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
66 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
67 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
68 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
69 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
70 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
71 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
72 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
73 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
74 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
75 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
76 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
77 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
78 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
79 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
80 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
81 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
82 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
83 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
84 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
85 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
86 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
87 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
88 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
89 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
90 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
91 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
92 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
93 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
94 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
95 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
96 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
97 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
98 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
99 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
100 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
101 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
102 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
103 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
104 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
105 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
106 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
107 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
108 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
109 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
110 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
111 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
124 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
125 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
127 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
128 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
129 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
130 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
131 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
132 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
133 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
134 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
135 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
136 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
137 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
138 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
139 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
140 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
141 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
142 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
143 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
144 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
145 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
146 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
147 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
148 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
149 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
150 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
151 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
152 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
153 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
154 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
155 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
156 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
157 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
158 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
159 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
160 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
161 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
162 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
163 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
164 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
165 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
166 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
167 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
168 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
169 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
170 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
171 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
172 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
173 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
174 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
175 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
177 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
178 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
179 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
180 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
181 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
182 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
183 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
184 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
185 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
186 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
187 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
188 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
189 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
190 8005321885 Rhizobium sp. R72 Isolate Nodule
191 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
192 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
193 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
194 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule
195 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
196 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified
197 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule
198 8056375014 Rhizobium redzepovicii 18T Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 77.7
Metatranscriptomes 0
Isolates 22.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 28.2
Nodule 15.41
Rhizoplane 5.57
Rhizosphere 24.26
Stem 0
Stem Tuber 0
Unclassified 26.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25158J39367_1000201 3300002739 Bacteria 14219
2 JGI25152J39213_1000107 3300002773 Bacteria 58133
3 JGI25152J39213_1002491 3300002773 Bacteria 6964
4 JGI25150J39212_1000022 3300002774 Bacteria 131963
5 JGI25150J39212_1000597 3300002774 Bacteria 14103
6 JGI25159J45721_1001046 3300002987 Bacteria 11822
7 JGI25151J46595_10000023 3300003187 Bacteria 221548
8 JGI25151J46595_10001021 3300003187 Bacteria 21020
9 JGI25151J46595_10001479 3300003187 Bacteria 15853
10 JGI25151J46595_10001675 3300003187 Bacteria 14507
11 JGI25153J46596_10000135 3300003215 Bacteria 79035
12 JGI25153J46596_10001172 3300003215 Bacteria 15825
13 JGI25153J46596_10027179 3300003215 Bacteria 2010
14 rootL2_10077368 3300003322 Bacteria 1545
15 rootH1_10133395 3300003323 Bacteria 2744
16 JGI25160J50197_1005528 3300003354 Bacteria 5244
17 JGI25161J50226_1000029 3300003374 Bacteria 144998
18 JGI25161J50226_1004708 3300003374 Bacteria 2799
19 Ga0055526_1002026 3300003771 Bacteria 13938
20 Ga0055526_1029436 3300003771 Bacteria 1630
21 Ga0055524_1019442 3300003775 Bacteria 2321
22 Ga0055528_1000096 3300003790 Bacteria 70375
23 Ga0055528_1015473 3300003790 Bacteria 2754
24 Ga0055540_1017748 3300003792 Bacteria 1975
25 Ga0055543_1000016 3300004625 Bacteria 176117
26 Ga0055543_1000710 3300004625 Bacteria 16887
27 Ga0065165_1001595 3300005262 Bacteria 23291
28 Ga0065165_1008438 3300005262 Bacteria 4819
29 Ga0065165_1008799 3300005262 Bacteria 4650
30 Ga0070658_10018285 3300005327 Bacteria 5610
31 Ga0070683_100617930 3300005329 Bacteria 1037
32 Ga0070668_100021373 3300005347 Bacteria 4889
33 Ga0070659_100484807 3300005366 Bacteria 1052
34 Ga0070694_100025030 3300005444 Bacteria 3857
35 Ga0070663_100104251 3300005455 Bacteria 2121
36 Ga0070665_100211309 3300005548 Bacteria 1941
37 Ga0070665_100314127 3300005548 Bacteria 1571
38 Ga0070704_100003753 3300005549 Bacteria 8748
39 Ga0068855_100015731 3300005563 Bacteria 9102
40 Ga0068855_100058783 3300005563 Bacteria 4501
41 Ga0068856_100308825 3300005614 Bacteria 1599
42 Ga0068852_100032431 3300005616 Bacteria 4325
43 Ga0068860_100033848 3300005843 Bacteria 4902
44 Ga0081540_1008829 3300005983 Bacteria 6997
45 Ga0075365_10011612 3300006038 Bacteria 5189
46 Ga0075365_10031551 3300006038 Bacteria 3400
47 Ga0075363_100004676 3300006048 Bacteria 6019
48 Ga0075364_10002126 3300006051 Bacteria 11084
49 Ga0075364_10238432 3300006051 Bacteria 1235
50 Ga0075367_10008150 3300006178 Bacteria 5412
51 Ga0075367_10215843 3300006178 Bacteria 1200
52 Ga0075370_10002055 3300006353 Bacteria 9149
53 Ga0075370_10042632 3300006353 Bacteria 2564
54 Ga0079104_1000373 3300006946 Bacteria 52808
55 Ga0105240_10005849 3300009093 Bacteria 18236
56 Ga0105247_10021812 3300009101 Bacteria 3853
57 Ga0105239_10339198 3300010375 Bacteria 1696
58 Ga0105239_10581002 3300010375 Bacteria 1277
59 Ga0157373_10001250 3300013100 Bacteria 19427
60 Ga0157373_10033023 3300013100 Bacteria 3725
61 Ga0157370_10002479 3300013104 Bacteria 22254
62 Ga0157370_10039778 3300013104 Bacteria 4543
63 Ga0157370_10050065 3300013104 Bacteria 3995
64 Ga0157369_10000882 3300013105 Bacteria 38208
65 Ga0157369_10276569 3300013105 Bacteria 1749
66 Ga0163162_10029285 3300013306 Bacteria 5449
67 Ga0163163_10126878 3300014325 Bacteria 2590
68 Ga0157379_10045580 3300014968 Bacteria 3913
69 Ga0213874_10024501 3300021377 Bacteria 1693
70 Ga0209436_100015 3300025208 Bacteria 126026
71 Ga0207425_1000038 3300025245 Bacteria 221600
72 Ga0207425_1000083 3300025245 Bacteria 96984
73 Ga0209129_1000036 3300025258 Bacteria 328331
74 Ga0209129_1000098 3300025258 Bacteria 163406
75 Ga0209129_1000166 3300025258 Bacteria 97875
76 Ga0209129_1001214 3300025258 Bacteria 14807
77 Ga0209673_1000252 3300025273 Bacteria 101552
78 Ga0209673_1000340 3300025273 Bacteria 85894
79 Ga0209673_1000594 3300025273 Bacteria 56419
80 Ga0209673_1002799 3300025273 Bacteria 11295
81 Ga0209130_1000051 3300025284 Bacteria 220482
82 Ga0209025_1000038 3300025294 Bacteria 380508
83 Ga0209025_1000108 3300025294 Bacteria 221600
84 Ga0209025_1000142 3300025294 Bacteria 183903
85 Ga0209025_1000336 3300025294 Bacteria 103514
86 Ga0209025_1001202 3300025294 Bacteria 36375
87 Ga0209564_1000306 3300025295 Bacteria 96600
88 Ga0209564_1001417 3300025295 Bacteria 24719
89 Ga0209758_1000104 3300025297 Bacteria 221600
90 Ga0209758_1000154 3300025297 Bacteria 161260
91 Ga0209758_1000300 3300025297 Bacteria 97000
92 Ga0209758_1024934 3300025297 Bacteria 2644
93 Ga0209256_1000246 3300025299 Bacteria 96612
94 Ga0209256_1000463 3300025299 Bacteria 61298
95 Ga0209256_1002563 3300025299 Bacteria 14524
96 Ga0209256_1008804 3300025299 Bacteria 4581
97 Ga0207426_1000043 3300025302 Bacteria 432827
98 Ga0207426_1001119 3300025302 Bacteria 24527
99 Ga0209051_1004256 3300025303 Bacteria 8909
100 Ga0209051_1008768 3300025303 Bacteria 5309
101 Ga0209257_1014178 3300025304 Bacteria 3451
102 Ga0207705_10056639 3300025909 Bacteria 2827
103 Ga0207695_10002310 3300025913 Bacteria 28436
104 Ga0207663_10071027 3300025916 Bacteria 2245
105 Ga0207657_10263409 3300025919 Bacteria 1371
106 Ga0207681_10035660 3300025923 Bacteria 3279
107 Ga0207700_10064394 3300025928 Bacteria 2792
108 Ga0207667_10020233 3300025949 Bacteria 7406
109 Ga0207667_10118000 3300025949 Bacteria 2734
110 Ga0207668_10032075 3300025972 Bacteria 3468
111 Ga0207702_10441127 3300026078 Bacteria 1262
112 Ga0207698_10189768 3300026142 Bacteria 1829
113 Ga0209281_1000108 3300027111 Bacteria 217582
114 Ga0209282_1000330 3300027666 Bacteria 23454
115 Ga0268264_10487340 3300028381 Bacteria 1200
116 Ga0307515_10003273 3300028794 Bacteria 34251
117 Ga0307515_10007958 3300028794 Bacteria 20811
118 Ga0307513_10008092 3300031456 Bacteria 13495
119 Ga0307513_10040901 3300031456 Bacteria 5121
120 Ga0307405_10006988 3300031731 Bacteria 5608
121 Ga0307406_10087162 3300031901 Bacteria 2092
122 Ga0307414_10004560 3300032004 Bacteria 7537
123 Ga0395899_0047412 3300037312 Bacteria 3199
124 Ga0395900_0048602 3300037418 Bacteria 4370
125 Ga0395898_0013672 3300037466 Bacteria 8350
126 Ga0395901_0099488 3300038443 Bacteria 3049
127 Ga0436365_1590826 3300039437 Bacteria 1149
128 Ga0436363_1571746 3300039450 Bacteria 4790
129 Ga0439465_0005720 3300041413 Bacteria 3957
130 Ga0439465_0047567 3300041413 Bacteria 1399
131 Ga0451837_1241672 3300041494 Bacteria 6428
132 Ga0451841_0405338 3300041498 Bacteria 5675
133 Ga0451849_0533985 3300041505 Bacteria 1630
134 Ga0451843_0020610 3300041509 Bacteria 6811
135 Ga0451853_1968180 3300041512 Bacteria 12882
136 Ga0439449_0064212 3300042007 Bacteria 1354
137 Ga0495584_0061543 3300046491 Bacteria 1887
138 Ga0495606_0042298 3300046507 Bacteria 3048
139 Ga0495606_0176381 3300046507 Bacteria 1236
140 Ga0495631_0107577 3300046518 Bacteria 1199
141 Ga0495632_0000181 3300046519 Bacteria 64344
142 Ga0495632_0001409 3300046519 Bacteria 20097
143 Ga0495648_0031103 3300046524 Bacteria 3520
144 Ga0495654_0122971 3300046530 Bacteria 1173
145 Ga0495622_0029968 3300046557 Bacteria 2542
146 Ga0495622_0046690 3300046557 Bacteria 2012
147 Ga0495661_0220989 3300046665 Bacteria 981
148 Ga0495581_0035196 3300047315 Bacteria 2897
149 Ga0495676_0000007 3300047321 Bacteria 276148
150 Ga0495683_0057830 3300047323 Bacteria 1927
151 Ga0495686_0220534 3300047472 Bacteria 1079
152 Ga0496100_0129291 3300048903 Bacteria 1777
153 Ga0496101_0050414 3300048904 Bacteria 2996
154 Ga0496102_0054319 3300048905 Bacteria 3652
155 Ga0496102_0203755 3300048905 Bacteria 1865
156 Ga0496105_0049307 3300048908 Bacteria 3476
157 Ga0496106_0003807 3300048909 Bacteria 11241
158 Ga0496106_0005301 3300048909 Bacteria 9551
159 Ga0496106_0010234 3300048909 Bacteria 6933
160 Ga0496106_0055482 3300048909 Bacteria 2995
161 Ga0496107_0044274 3300048910 Bacteria 3199
162 Ga0496107_0103390 3300048910 Bacteria 2090
163 Ga0496113_0207999 3300048916 Bacteria 1557
164 Ga0496115_0148637 3300048918 Bacteria 1934
165 Ga0496116_0010471 3300048919 Bacteria 7765
166 Ga0496116_0069491 3300048919 Bacteria 2239
167 Ga0496116_0138221 3300048919 Bacteria 1375
168 Ga0496116_0138484 3300048919 Bacteria 1373
169 Ga0496117_0003639 3300048920 Bacteria 17751
170 Ga0496117_0011501 3300048920 Bacteria 7922
171 Ga0496117_0025839 3300048920 Bacteria 4604
172 Ga0496117_0038633 3300048920 Bacteria 3535
173 Ga0496117_0044852 3300048920 Bacteria 3199
174 Ga0496118_0007586 3300048921 Bacteria 11440
175 Ga0496118_0016292 3300048921 Bacteria 6825
176 Ga0496118_0041558 3300048921 Bacteria 3639
177 Ga0496118_0068395 3300048921 Bacteria 2579
178 Ga0496118_0131335 3300048921 Bacteria 1608
179 Ga0496118_0192702 3300048921 Bacteria 1217
180 Ga0496118_0193558 3300048921 Bacteria 1213
181 Ga0496119_0010342 3300048922 Bacteria 7857
182 Ga0496119_0014108 3300048922 Bacteria 6288
183 Ga0496120_0001548 3300048923 Bacteria 26898
184 Ga0496121_0000115 3300048924 Bacteria 178411
185 Ga0496121_0001493 3300048924 Bacteria 39397
186 Ga0496121_0006855 3300048924 Bacteria 13926
187 Ga0496121_0017254 3300048924 Bacteria 7387
188 Ga0496121_0028402 3300048924 Bacteria 5206
189 Ga0496121_0334442 3300048924 Bacteria 1014
190 Ga0496122_0002223 3300048925 Bacteria 28285
191 Ga0496122_0003338 3300048925 Bacteria 21183
192 Ga0496122_0009270 3300048925 Bacteria 10407
193 Ga0496122_0013286 3300048925 Bacteria 8070
194 Ga0496122_0059311 3300048925 Bacteria 2825
195 Ga0496122_0078908 3300048925 Bacteria 2303
196 Ga0496123_0019751 3300048926 Bacteria 5299
197 Ga0496123_0041503 3300048926 Bacteria 3188
198 Ga0496123_0044309 3300048926 Bacteria 3043
199 Ga0496123_0096194 3300048926 Bacteria 1739
200 Ga0496124_0000023 3300048927 Bacteria 415226
201 Ga0496124_0000094 3300048927 Bacteria 189147
202 Ga0496124_0000409 3300048927 Bacteria 77585
203 Ga0496124_0007110 3300048927 Bacteria 11986
204 Ga0496124_0040291 3300048927 Bacteria 4043
205 Ga0496124_0182891 3300048927 Bacteria 1611
206 Ga0496124_0290254 3300048927 Bacteria 1187
207 Ga0496125_0000034 3300048928 Bacteria 348231
208 Ga0496125_0000134 3300048928 Bacteria 161449
209 Ga0496125_0045248 3300048928 Bacteria 3707
210 Ga0496125_0100092 3300048928 Bacteria 2138
211 Ga0496126_0001991 3300048929 Bacteria 28960
212 Ga0496126_0011432 3300048929 Bacteria 9187
213 Ga0496126_0032457 3300048929 Bacteria 4919
214 Ga0496126_0045743 3300048929 Bacteria 4020
215 Ga0496126_0384817 3300048929 Bacteria 1141
216 Ga0501034_0048681 3300049571 Bacteria 4278
217 Ga0501034_0160668 3300049571 Bacteria 2218
218 Ga0501037_0043927 3300049573 Bacteria 3284
219 nmdc:mga03n38_49242_c1 3300050490 Bacteria 1873
220 nmdc:mga00v17_17362_c2 3300050491 Bacteria 3758
221 nmdc:mga00v17_214_c1 3300050491 Bacteria 34878
222 nmdc:mga0yw44_8360_c1 3300050492 Bacteria 5151
223 nmdc:mga0yw44_908_c1 3300050492 Bacteria 7682
224 nmdc:mga06z11_135921_c1 3300050494 Bacteria 1385
225 nmdc:mga06z11_160327_c1 3300050494 Bacteria 1285
226 nmdc:mga06z11_169276_c1 3300050494 Unclassified 1253
227 nmdc:mga06z11_8224_c1 3300050494 Bacteria 4337
228 nmdc:mga07m45_15261_c1 3300050496 Bacteria 4102
229 nmdc:mga07m45_49999_c1 3300050496 Bacteria 2355
230 Ga0495612_0112622 3300053078 Bacteria 1166
231 Ga0500618_000212 3300053125 Bacteria 45838
232 Ga0500618_000252 3300053125 Bacteria 42453
233 Ga0500559_0002127 3300053136 Bacteria 10546
234 Ga0500604_0001321 3300053151 Bacteria 6904
235 Ga0500616_0000405 3300053153 Bacteria 59087
236 Ga0500627_0120685 3300053158 Bacteria 1182
237 Ga0500633_0000613 3300053160 Bacteria 5897

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2824661429 2824662837 241
2 iso_pu_bacteria 2879099564 2879102767 241
3 iso_pu_bacteria 2904541872 2904542285 241
4 iso_pu_bacteria 2929160207 2929167569 241
5 iso_pu_bacteria 2929615660 2929619820 241
6 iso_pu_bacteria 2929624759 2929629131 241
7 iso_pu_bacteria 2932809354 2932816631 241
8 iso_pu_bacteria 2932818245 2932822082 241
9 iso_pu_bacteria 2933577622 2933581739 241
10 iso_pu_bacteria 2935638405 2935646780 241
11 iso_pu_bacteria 2935665750 2935674554 241
12 iso_pu_bacteria 2935684952 2935690655 241
13 iso_pu_bacteria 2935713505 2935717649 241
14 iso_pu_bacteria 2935722832 2935727201 241
15 iso_pu_bacteria 2935732158 2935735971 241
16 iso_pu_bacteria 2935741537 2935744758 241
17 iso_pu_bacteria 2935750917 2935755664 241
18 iso_pu_bacteria 2935760218 2935761847 241
19 iso_pu_bacteria 2935801545 2935808112 241
20 iso_pu_bacteria 2935810662 2935814168 241
21 iso_pu_bacteria 2935827899 2935836030 241
22 iso_pu_bacteria 2936037263 2936039723 241
23 iso_pu_bacteria 2940556831 2940561055 241
24 iso_pu_bacteria 8055742211 8055750427 241
25 3300005329 Ga0070683_100617930 Ga0070683_1006179301 242
26 3300003187 JGI25151J46595_10001021 JGI25151J46595_100010216 245
27 3300005347 Ga0070668_100021373 Ga0070668_1000213732 245
28 3300005455 Ga0070663_100104251 Ga0070663_1001042512 245
29 3300006038 Ga0075365_10031551 Ga0075365_100315512 245
30 3300006178 Ga0075367_10215843 Ga0075367_102158432 245
31 3300009101 Ga0105247_10021812 Ga0105247_100218124 245
32 3300010375 Ga0105239_10339198 Ga0105239_103391982 245
33 3300013306 Ga0163162_10029285 Ga0163162_100292856 245
34 3300025294 Ga0209025_1000038 Ga0209025_1000038359 245
35 3300025916 Ga0207663_10071027 Ga0207663_100710272 245
36 3300025928 Ga0207700_10064394 Ga0207700_100643943 245
37 3300025972 Ga0207668_10032075 Ga0207668_100320753 245
38 3300046518 Ga0495631_0107577 Ga0495631_0107577_241_999 245
39 3300046524 Ga0495648_0031103 Ga0495648_0031103_535_1293 245
40 3300046530 Ga0495654_0122971 Ga0495654_0122971_162_920 245
41 3300046557 Ga0495622_0029968 Ga0495622_0029968_1612_2370 245
42 3300046665 Ga0495661_0220989 Ga0495661_0220989_188_946 245
43 3300047323 Ga0495683_0057830 Ga0495683_0057830_456_1214 245
44 3300048903 Ga0496100_0129291 Ga0496100_0129291_311_1069 245
45 3300048904 Ga0496101_0050414 Ga0496101_0050414_1464_2222 245
46 3300048905 Ga0496102_0203755 Ga0496102_0203755_728_1486 245
47 3300048908 Ga0496105_0049307 Ga0496105_0049307_322_1080 245
48 3300048909 Ga0496106_0055482 Ga0496106_0055482_2143_2901 245
49 3300048916 Ga0496113_0207999 Ga0496113_0207999_742_1500 245
50 3300048918 Ga0496115_0148637 Ga0496115_0148637_341_1099 245
51 3300048924 Ga0496121_0006855 Ga0496121_0006855_10272_11030 245
52 3300048929 Ga0496126_0384817 Ga0496126_0384817_202_960 245
53 3300049571 Ga0501034_0160668 Ga0501034_0160668_1267_2025 245
54 3300049573 Ga0501037_0043927 Ga0501037_0043927_365_1123 245
55 3300050492 nmdc:mga0yw44_908_c1 nmdc:mga0yw44_908_c1_689_1447 245
56 3300050494 nmdc:mga06z11_160327_c1 nmdc:mga06z11_160327_c1_40_798 245
57 3300053078 Ga0495612_0112622 Ga0495612_0112622_228_1109 266
58 3300031731 Ga0307405_10006988 Ga0307405_100069884 267
59 3300002774 JGI25150J39212_1000597 JGI25150J39212_10005976 268
60 3300003187 JGI25151J46595_10001479 JGI25151J46595_100014798 268
61 3300003215 JGI25153J46596_10001172 JGI25153J46596_100011728 268
62 3300025245 Ga0207425_1000083 Ga0207425_10000838 268
63 3300025258 Ga0209129_1000098 Ga0209129_100009876 268
64 3300025294 Ga0209025_1000142 Ga0209025_100014267 268
65 3300025297 Ga0209758_1000300 Ga0209758_10003008 268
66 3300006946 Ga0079104_1000373 Ga0079104_100037337 272
67 3300027111 Ga0209281_1000108 Ga0209281_1000108185 272
68 3300003323 rootH1_10133395 rootH1_101333952 275
69 3300003354 JGI25160J50197_1005528 JGI25160J50197_10055283 276
70 3300003374 JGI25161J50226_1004708 JGI25161J50226_10047082 276
71 3300004625 Ga0055543_1000710 Ga0055543_10007103 276
72 3300005262 Ga0065165_1001595 Ga0065165_10015957 276
73 3300025302 Ga0207426_1001119 Ga0207426_100111920 276
74 3300046507 Ga0495606_0042298 Ga0495606_0042298_1003_1869 276
75 3300005262 Ga0065165_1008799 Ga0065165_10087996 278
76 3300032004 Ga0307414_10004560 Ga0307414_100045602 278
77 3300005548 Ga0070665_100314127 Ga0070665_1003141272 279
78 3300006353 Ga0075370_10042632 Ga0075370_100426322 279
79 3300013104 Ga0157370_10039778 Ga0157370_100397782 279
80 3300025923 Ga0207681_10035660 Ga0207681_100356603 279
81 3300048909 Ga0496106_0010234 Ga0496106_0010234_3390_4253 279
82 3300048910 Ga0496107_0044274 Ga0496107_0044274_976_1839 279
83 3300048919 Ga0496116_0069491 Ga0496116_0069491_1125_1988 279
84 3300048919 Ga0496116_0138221 Ga0496116_0138221_161_1126 279
85 3300048919 Ga0496116_0138484 Ga0496116_0138484_160_1125 279
86 3300048920 Ga0496117_0003639 Ga0496117_0003639_5506_6471 279
87 3300048921 Ga0496118_0007586 Ga0496118_0007586_5229_6194 279
88 3300048922 Ga0496119_0014108 Ga0496119_0014108_4679_5644 279
89 3300048924 Ga0496121_0017254 Ga0496121_0017254_1657_2520 279
90 3300048924 Ga0496121_0028402 Ga0496121_0028402_3609_4574 279
91 3300048925 Ga0496122_0009270 Ga0496122_0009270_3999_4964 279
92 3300048925 Ga0496122_0078908 Ga0496122_0078908_1268_2131 279
93 3300048926 Ga0496123_0044309 Ga0496123_0044309_748_1611 279
94 3300048927 Ga0496124_0007110 Ga0496124_0007110_3633_4496 279
95 3300048928 Ga0496125_0045248 Ga0496125_0045248_1845_2810 279
96 3300048929 Ga0496126_0001991 Ga0496126_0001991_300_1163 279
97 3300050496 nmdc:mga07m45_49999_c1 nmdc:mga07m45_49999_c1_808_1671 279
98 3300046491 Ga0495584_0061543 Ga0495584_0061543_703_1569 280
99 3300048921 Ga0496118_0041558 Ga0496118_0041558_1684_2526 280
100 3300048921 Ga0496118_0192702 Ga0496118_0192702_61_927 280
101 3300050494 nmdc:mga06z11_135921_c1 nmdc:mga06z11_135921_c1_367_1209 280
102 3300002773 JGI25152J39213_1000107 JGI25152J39213_100010740 281
103 3300002774 JGI25150J39212_1000022 JGI25150J39212_100002223 281
104 3300003187 JGI25151J46595_10000023 JGI25151J46595_10000023120 281
105 3300003215 JGI25153J46596_10027179 JGI25153J46596_100271792 281
106 3300025245 Ga0207425_1000038 Ga0207425_1000038108 281
107 3300025258 Ga0209129_1000036 Ga0209129_1000036108 281
108 3300025294 Ga0209025_1000108 Ga0209025_1000108108 281
109 3300025297 Ga0209758_1000104 Ga0209758_1000104119 281
110 3300025299 Ga0209256_1008804 Ga0209256_10088048 281
111 3300046557 Ga0495622_0046690 Ga0495622_0046690_179_1033 281
112 3300047315 Ga0495581_0035196 Ga0495581_0035196_112_966 281
113 3300047321 Ga0495676_0000007 Ga0495676_0000007_44322_45176 281
114 3300048929 Ga0496126_0032457 Ga0496126_0032457_2393_3262 281
115 3300002773 JGI25152J39213_1002491 JGI25152J39213_10024914 282
116 3300003215 JGI25153J46596_10000135 JGI25153J46596_1000013558 282
117 3300003322 rootL2_10077368 rootL2_100773682 282
118 3300003771 Ga0055526_1002026 Ga0055526_100202611 282
119 3300003792 Ga0055540_1017748 Ga0055540_10177482 282
120 3300005327 Ga0070658_10018285 Ga0070658_100182857 282
121 3300005366 Ga0070659_100484807 Ga0070659_1004848071 282
122 3300005548 Ga0070665_100211309 Ga0070665_1002113094 282
123 3300005563 Ga0068855_100015731 Ga0068855_1000157314 282
124 3300005614 Ga0068856_100308825 Ga0068856_1003088252 282
125 3300005616 Ga0068852_100032431 Ga0068852_1000324311 282
126 3300009093 Ga0105240_10005849 Ga0105240_100058499 282
127 3300010375 Ga0105239_10581002 Ga0105239_105810022 282
128 3300013104 Ga0157370_10002479 Ga0157370_100024796 282
129 3300013105 Ga0157369_10000882 Ga0157369_1000088235 282
130 3300025258 Ga0209129_1001214 Ga0209129_10012147 282
131 3300025273 Ga0209673_1000340 Ga0209673_10003405 282
132 3300025273 Ga0209673_1002799 Ga0209673_10027992 282
133 3300025295 Ga0209564_1001417 Ga0209564_100141716 282
134 3300025297 Ga0209758_1000154 Ga0209758_100015474 282
135 3300025299 Ga0209256_1002563 Ga0209256_100256316 282
136 3300025303 Ga0209051_1004256 Ga0209051_10042566 282
137 3300025303 Ga0209051_1008768 Ga0209051_100876811 282
138 3300025304 Ga0209257_1014178 Ga0209257_10141784 282
139 3300025909 Ga0207705_10056639 Ga0207705_100566395 282
140 3300025913 Ga0207695_10002310 Ga0207695_1000231019 282
141 3300025949 Ga0207667_10020233 Ga0207667_100202337 282
142 3300026078 Ga0207702_10441127 Ga0207702_104411272 282
143 3300026142 Ga0207698_10189768 Ga0207698_101897681 282
144 3300037312 Ga0395899_0047412 Ga0395899_0047412_187_1035 282
145 3300037418 Ga0395900_0048602 Ga0395900_0048602_2034_2882 282
146 3300037466 Ga0395898_0013672 Ga0395898_0013672_7003_7851 282
147 3300038443 Ga0395901_0099488 Ga0395901_0099488_1966_2814 282
148 3300041413 Ga0439465_0047567 Ga0439465_0047567_372_1238 282
149 3300048927 Ga0496124_0040291 Ga0496124_0040291_2224_3120 282
150 3300048928 Ga0496125_0100092 Ga0496125_0100092_1186_2082 282
151 3300053136 Ga0500559_0002127 Ga0500559_0002127_2942_3808 282
152 iso_pu_bacteria 2534681796 2535518337 283
153 iso_pu_bacteria 2599185156 2599333547 283
154 iso_pu_bacteria 2600254933 2600376149 283
155 iso_pu_bacteria 2600255279 2601612023 283
156 iso_pu_bacteria 2600255308 2601748727 283
157 iso_pu_bacteria 2643221636 2644203720 283
158 iso_pu_bacteria 2643221637 2644208487 283
159 iso_pu_bacteria 2643221643 2644238958 283
160 iso_pu_bacteria 2643221689 2644498549 283
161 iso_pu_bacteria 2643221718 2644651739 283
162 iso_pu_bacteria 2738541293 2738801801 283
163 iso_pu_bacteria 2738541293 2738804395 283
164 iso_pu_bacteria 2842922631 2842925044 283
165 iso_pu_bacteria 2899803654 2899807061 283
166 iso_pu_bacteria 2919100787 2919105137 283
167 iso_pu_bacteria 2933594066 2933598476 283
168 iso_pu_bacteria 8005542996 8005549242 283
169 iso_pu_bacteria 8054460903 8054464708 283
170 iso_pu_bacteria 2513237088 2513600260 284
171 iso_pu_bacteria 2513237103 2513709643 284
172 iso_pu_bacteria 2513237146 2513928234 284
173 iso_pu_bacteria 2516653077 2517042120 284
174 iso_pu_bacteria 2517093000 2517100059 284
175 iso_pu_bacteria 2582581294 2585205127 284
176 iso_pu_bacteria 2599185170 2599416873 284
177 iso_pu_bacteria 2765235942 2766064525 284
178 iso_pu_bacteria 2791355267 2793370651 284
179 iso_pu_bacteria 2838035591 2838041798 284
180 iso_pu_bacteria 2838661181 2838661200 284
181 iso_pu_bacteria 2842110456 2842113921 284
182 iso_pu_bacteria 2857516855 2857521429 284
183 iso_pu_bacteria 2933586486 2933589444 284
184 iso_pu_bacteria 2936367885 2936371008 284
185 iso_pu_bacteria 2936375103 2936375744 284
186 iso_pu_bacteria 2996887358 2996890666 284
187 iso_pu_bacteria 650716007 650741486 284
188 iso_pu_bacteria 8005321885 8005325193 284
189 iso_pu_bacteria 8005376324 8005380412 284
190 iso_pu_bacteria 8005563573 8005567764 284
191 iso_pu_bacteria 8023680758 8023681505 284
192 iso_pu_bacteria 8024486573 8024488813 284
193 iso_pu_bacteria 8056375014 8056378731 284
194 3300047472 Ga0495686_0220534 Ga0495686_0220534_98_955 285
195 iso_pu_bacteria 2643221637 2644207915 285
196 iso_pu_bacteria 2643221718 2644651190 285
197 3300048920 Ga0496117_0025839 Ga0496117_0025839_924_1871 286
198 3300048921 Ga0496118_0068395 Ga0496118_0068395_888_1835 286
199 3300048925 Ga0496122_0003338 Ga0496122_0003338_14306_15253 286
200 3300048927 Ga0496124_0000023 Ga0496124_0000023_142298_143170 286
201 3300003187 JGI25151J46595_10001675 JGI25151J46595_100016758 287
202 3300003775 Ga0055524_1019442 Ga0055524_10194423 287
203 3300003790 Ga0055528_1015473 Ga0055528_10154731 287
204 3300006048 Ga0075363_100004676 Ga0075363_1000046768 287
205 3300006051 Ga0075364_10238432 Ga0075364_102384322 287
206 3300006178 Ga0075367_10008150 Ga0075367_100081502 287
207 3300006353 Ga0075370_10002055 Ga0075370_100020553 287
208 3300013100 Ga0157373_10033023 Ga0157373_100330234 287
209 3300013104 Ga0157370_10050065 Ga0157370_100500655 287
210 3300013105 Ga0157369_10276569 Ga0157369_102765691 287
211 3300025258 Ga0209129_1000166 Ga0209129_10001667 287
212 3300025273 Ga0209673_1000594 Ga0209673_10005946 287
213 3300025294 Ga0209025_1000336 Ga0209025_100033610 287
214 3300025295 Ga0209564_1000306 Ga0209564_100030641 287
215 3300025297 Ga0209758_1024934 Ga0209758_10249343 287
216 3300025299 Ga0209256_1000246 Ga0209256_100024641 287
217 3300027666 Ga0209282_1000330 Ga0209282_100033025 287
218 3300028794 Ga0307515_10003273 Ga0307515_100032736 287
219 3300028794 Ga0307515_10007958 Ga0307515_1000795811 287
220 3300031456 Ga0307513_10008092 Ga0307513_1000809214 287
221 3300031456 Ga0307513_10040901 Ga0307513_100409012 287
222 3300031901 Ga0307406_10087162 Ga0307406_100871622 287
223 3300046519 Ga0495632_0000181 Ga0495632_0000181_33914_34777 287
224 3300046519 Ga0495632_0001409 Ga0495632_0001409_2577_3440 287
225 3300048909 Ga0496106_0005301 Ga0496106_0005301_5037_5900 287
226 3300048920 Ga0496117_0038633 Ga0496117_0038633_2553_3416 287
227 3300048921 Ga0496118_0193558 Ga0496118_0193558_210_1073 287
228 3300048924 Ga0496121_0001493 Ga0496121_0001493_10677_11540 287
229 3300048925 Ga0496122_0059311 Ga0496122_0059311_906_1769 287
230 3300048926 Ga0496123_0041503 Ga0496123_0041503_517_1380 287
231 3300048927 Ga0496124_0000094 Ga0496124_0000094_176038_176901 287
232 3300048927 Ga0496124_0182891 Ga0496124_0182891_199_1062 287
233 3300048928 Ga0496125_0000034 Ga0496125_0000034_300843_301706 287
234 3300048929 Ga0496126_0011432 Ga0496126_0011432_2244_3107 287
235 3300050490 nmdc:mga03n38_49242_c1 nmdc:mga03n38_49242_c1_406_1275 287
236 3300050491 nmdc:mga00v17_17362_c2 nmdc:mga00v17_17362_c2_659_1522 287
237 3300050494 nmdc:mga06z11_8224_c1 nmdc:mga06z11_8224_c1_2789_3658 287
238 3300050496 nmdc:mga07m45_15261_c1 nmdc:mga07m45_15261_c1_1135_2004 287
239 3300053125 Ga0500618_000252 Ga0500618_000252_35280_36143 287
240 3300053158 Ga0500627_0120685 Ga0500627_0120685_195_1058 287
241 3300053160 Ga0500633_0000613 Ga0500633_0000613_821_1684 287
242 3300002739 JGI25158J39367_1000201 JGI25158J39367_100020114 288
243 3300002987 JGI25159J45721_1001046 JGI25159J45721_10010466 288
244 3300003374 JGI25161J50226_1000029 JGI25161J50226_1000029143 288
245 3300003771 Ga0055526_1029436 Ga0055526_10294362 288
246 3300003790 Ga0055528_1000096 Ga0055528_100009614 288
247 3300004625 Ga0055543_1000016 Ga0055543_1000016104 288
248 3300005262 Ga0065165_1008438 Ga0065165_10084384 288
249 3300005444 Ga0070694_100025030 Ga0070694_1000250303 288
250 3300005549 Ga0070704_100003753 Ga0070704_1000037538 288
251 3300005563 Ga0068855_100058783 Ga0068855_1000587834 288
252 3300005843 Ga0068860_100033848 Ga0068860_1000338485 288
253 3300005983 Ga0081540_1008829 Ga0081540_10088291 288
254 3300006038 Ga0075365_10011612 Ga0075365_100116122 288
255 3300006051 Ga0075364_10002126 Ga0075364_100021265 288
256 3300013100 Ga0157373_10001250 Ga0157373_1000125022 288
257 3300014325 Ga0163163_10126878 Ga0163163_101268782 288
258 3300014968 Ga0157379_10045580 Ga0157379_100455801 288
259 3300021377 Ga0213874_10024501 Ga0213874_100245012 288
260 3300025208 Ga0209436_100015 Ga0209436_100015125 288
261 3300025273 Ga0209673_1000252 Ga0209673_100025244 288
262 3300025284 Ga0209130_1000051 Ga0209130_1000051128 288
263 3300025294 Ga0209025_1001202 Ga0209025_100120239 288
264 3300025299 Ga0209256_1000463 Ga0209256_100046351 288
265 3300025302 Ga0207426_1000043 Ga0207426_1000043346 288
266 3300025919 Ga0207657_10263409 Ga0207657_102634091 288
267 3300025949 Ga0207667_10118000 Ga0207667_101180002 288
268 3300028381 Ga0268264_10487340 Ga0268264_104873402 288
269 3300039437 Ga0436365_1590826 Ga0436365_1590826_143_1015 288
270 3300039450 Ga0436363_1571746 Ga0436363_1571746_2696_3568 288
271 3300041413 Ga0439465_0005720 Ga0439465_0005720_791_1657 288
272 3300041494 Ga0451837_1241672 Ga0451837_1241672_484_1488 288
273 3300041498 Ga0451841_0405338 Ga0451841_0405338_3836_4840 288
274 3300041505 Ga0451849_0533985 Ga0451849_0533985_574_1536 288
275 3300041509 Ga0451843_0020610 Ga0451843_0020610_4738_5700 288
276 3300041512 Ga0451853_1968180 Ga0451853_1968180_9497_10501 288
277 3300042007 Ga0439449_0064212 Ga0439449_0064212_433_1299 288
278 3300046507 Ga0495606_0176381 Ga0495606_0176381_329_1219 288
279 3300048905 Ga0496102_0054319 Ga0496102_0054319_440_1357 288
280 3300048909 Ga0496106_0003807 Ga0496106_0003807_1372_2289 288
281 3300048910 Ga0496107_0103390 Ga0496107_0103390_915_1832 288
282 3300048919 Ga0496116_0010471 Ga0496116_0010471_1010_1876 288
283 3300048920 Ga0496117_0011501 Ga0496117_0011501_181_1047 288
284 3300048920 Ga0496117_0044852 Ga0496117_0044852_760_1626 288
285 3300048921 Ga0496118_0016292 Ga0496118_0016292_5387_6253 288
286 3300048921 Ga0496118_0131335 Ga0496118_0131335_382_1248 288
287 3300048922 Ga0496119_0010342 Ga0496119_0010342_5635_6501 288
288 3300048923 Ga0496120_0001548 Ga0496120_0001548_6585_7451 288
289 3300048924 Ga0496121_0000115 Ga0496121_0000115_144995_145861 288
290 3300048924 Ga0496121_0334442 Ga0496121_0334442_17_883 288
291 3300048925 Ga0496122_0002223 Ga0496122_0002223_26079_26978 288
292 3300048925 Ga0496122_0013286 Ga0496122_0013286_2455_3321 288
293 3300048926 Ga0496123_0019751 Ga0496123_0019751_3198_4064 288
294 3300048926 Ga0496123_0096194 Ga0496123_0096194_383_1249 288
295 3300048927 Ga0496124_0000409 Ga0496124_0000409_46782_47648 288
296 3300048927 Ga0496124_0290254 Ga0496124_0290254_249_1115 288
297 3300048928 Ga0496125_0000134 Ga0496125_0000134_151015_151881 288
298 3300048929 Ga0496126_0045743 Ga0496126_0045743_1363_2229 288
299 3300049571 Ga0501034_0048681 Ga0501034_0048681_1312_2196 288
300 3300050491 nmdc:mga00v17_214_c1 nmdc:mga00v17_214_c1_2723_3589 288
301 3300050492 nmdc:mga0yw44_8360_c1 nmdc:mga0yw44_8360_c1_1763_2629 288
302 3300050494 nmdc:mga06z11_169276_c1 nmdc:mga06z11_169276_c1_285_1184 288
303 3300053125 Ga0500618_000212 Ga0500618_000212_22005_22871 288
304 3300053151 Ga0500604_0001321 Ga0500604_0001321_2812_3813 288
305 3300053153 Ga0500616_0000405 Ga0500616_0000405_45082_45948 288

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

92

286

0.96

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

98

331

0.96

PF08659

KR

KR domain

92

275

0.86

PF23441

85

334

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
3i3o-assembly2.cif.gz_G 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9762 28 286
5u8p-assembly1.cif.gz_A crystal structure of a short chain dehydrogenase from burkholderia cenocepacia j2315 in complex with nad 0.971 8 288
3i3o-assembly2.cif.gz_H 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9664 16 286
3i3o-assembly1.cif.gz_A 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9663 10 286
3i3o-assembly2.cif.gz_G 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9606 28 286
ID Description Score Start End Superfamily
3i3oG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9762 28 286 3.40.50.720
af_K7KGR3_30_220_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9706 107 288 3.40.50.720
af_Q75KH3_1_297_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9635 9 286 3.40.50.720
3r3sA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9625 5 288 3.40.50.720
3i3oG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9606 28 286 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A418IZU3-F1-model_v4 deleted 0.9839 94 223
AF-A0A519T453-F1-model_v4 SDR family oxidoreductase 0.9807 35 284 GO:0016614
AF-A0A1V3CZV1-F1-model_v4 deleted 0.9786 49 288
AF-A0A418IZU3-F1-model_v4 deleted 0.9765 94 223
AF-A0A6J4KT55-F1-model_v4 Oxidoreductase, short-chain dehydrogenase/reductase family 0.9745 152 288 GO:0016614

Feature Viewer

pLDDT pTM Quality
91.66 0.91 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map