F398154

General Info

Members Datasets Scaffolds Average Seq Length
305 178 610 207

Family's Representative Sequence

Representative Sequence 3300025939|Ga0207665_10117502|Ga0207665_101175023
Length 250
Sequence VEDTKATHETANPIKILDTATRSIGTSYITYLLVGRANLNNARVGDMVMNAGEQLSTRDLIVNEALRCFAEAGYDGTSLNDIAAGVGIRRPSLLHHFPSKEALYQEVFERLLGEWFERLADAISSSEHGLAKVQLVIGAGFDFFADNNDYVRLMRREALDGGAHLGIDLAGVLRPMWDQSVGYFQVQMEAGVFRQHDPEQLLLTGYGALLSYFSDSPFLGGLLDEDPLAPDALLRRREHITAFFQTALAP

Samples

Sample ID Description Type Environment
1 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
28 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
31 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
32 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
58 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
83 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
84 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
85 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
86 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
87 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
88 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
89 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
90 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
91 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
92 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
93 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
94 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
95 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
96 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
97 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
98 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
99 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
100 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
101 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
102 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
103 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
104 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
105 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
106 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
107 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
108 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
109 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
110 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
111 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
112 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
113 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
114 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
115 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
116 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
117 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
118 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
119 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
120 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
121 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
122 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
123 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
124 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
125 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
126 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
127 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
130 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
131 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
132 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
133 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
134 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
135 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
136 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
137 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
150 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
151 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
152 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
153 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
154 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
155 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
156 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
157 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
158 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
159 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
160 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
161 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
162 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
163 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
166 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
167 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
168 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
169 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
170 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
171 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
172 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
173 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
174 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
175 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
176 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
178 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.67
Metatranscriptomes 0.33
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.44
Nodule 0
Rhizoplane 7.54
Rhizosphere 77.05
Stem 0
Stem Tuber 0
Unclassified 5.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207665_10117502 3300025939 Bacteria 1875
2 Ga0070690_100120159 3300005330 Bacteria 1763
3 Ga0068868_100909305 3300005338 Bacteria 800
4 Ga0070687_100048283 3300005343 Bacteria 2188
5 Ga0070675_100368457 3300005354 Bacteria 1277
6 Ga0070671_100001047 3300005355 Bacteria 20383
7 Ga0070674_100250209 3300005356 Bacteria 1392
8 Ga0070673_100188105 3300005364 Unclassified 1772
9 Ga0070688_100038208 3300005365 Bacteria 2930
10 Ga0070688_100092227 3300005365 Bacteria 1981
11 Ga0070714_100519717 3300005435 Bacteria 1137
12 Ga0070700_100041131 3300005441 Unclassified 2833
13 Ga0070678_100432144 3300005456 Bacteria 1150
14 Ga0070662_100114518 3300005457 Unclassified 2059
15 Ga0068867_100078921 3300005459 Bacteria 2477
16 Ga0070685_10052972 3300005466 Bacteria 2349
17 Ga0070706_100089840 3300005467 Bacteria 2848
18 Ga0068853_100398327 3300005539 Bacteria 1288
19 Ga0070672_100170106 3300005543 Bacteria 1812
20 Ga0070686_100155791 3300005544 Bacteria 1604
21 Ga0070702_100037526 3300005615 Bacteria 2692
22 Ga0068859_100436272 3300005617 Bacteria 1406
23 Ga0068859_100523032 3300005617 Bacteria 1281
24 Ga0068859_100555644 3300005617 Bacteria 1242
25 Ga0068861_100056136 3300005719 Bacteria 3005
26 Ga0068858_100027963 3300005842 Bacteria 5240
27 Ga0068860_100048008 3300005843 Bacteria 4069
28 Ga0068860_100270897 3300005843 Bacteria 1657
29 Ga0068862_100089313 3300005844 Bacteria 2682
30 Ga0068862_100099065 3300005844 Bacteria 2547
31 Ga0075365_10000071 3300006038 Bacteria 30680
32 Ga0075365_10013659 3300006038 Bacteria 4868
33 Ga0075365_10067572 3300006038 Bacteria 2400
34 Ga0075365_10240674 3300006038 Bacteria 1271
35 Ga0075368_10013153 3300006042 Bacteria 3036
36 Ga0075363_100045942 3300006048 Bacteria 2316
37 Ga0075363_100173934 3300006048 Bacteria 1223
38 Ga0075364_10007674 3300006051 Bacteria 6418
39 Ga0075364_10012934 3300006051 Bacteria 5122
40 Ga0075364_10023706 3300006051 Bacteria 3888
41 Ga0075364_10069643 3300006051 Bacteria 2315
42 Ga0075362_10172660 3300006177 Bacteria 1045
43 Ga0075367_10056157 3300006178 Bacteria 2339
44 Ga0075367_10062780 3300006178 Bacteria 2219
45 Ga0075367_10107071 3300006178 Bacteria 1713
46 Ga0075367_10246323 3300006178 Bacteria 1120
47 Ga0075369_10372639 3300006186 Bacteria 671
48 Ga0097621_100228725 3300006237 Bacteria 1623
49 Ga0097621_100724770 3300006237 Bacteria 917
50 Ga0068871_100083936 3300006358 Bacteria 2643
51 Ga0075428_100000110 3300006844 Bacteria 69621
52 Ga0075428_100266272 3300006844 Bacteria 1845
53 Ga0068865_100019517 3300006881 Bacteria 4387
54 Ga0068865_100072798 3300006881 Bacteria 2442
55 Ga0097620_100436262 3300006931 Bacteria 1406
56 Ga0097620_100523042 3300006931 Bacteria 1281
57 Ga0097620_100555628 3300006931 Bacteria 1242
58 Ga0105245_10013656 3300009098 Bacteria 7074
59 Ga0105245_10105685 3300009098 Unclassified 2611
60 Ga0105247_10279630 3300009101 Bacteria 1151
61 Ga0105243_10019339 3300009148 Bacteria 5162
62 Ga0105241_10402639 3300009174 Bacteria 1201
63 Ga0105242_10012235 3300009176 Bacteria 6604
64 Ga0105242_10067500 3300009176 Bacteria 2957
65 Ga0105242_10664966 3300009176 Bacteria 1015
66 Ga0105248_10280900 3300009177 Bacteria 1874
67 Ga0105248_10388274 3300009177 Bacteria 1572
68 Ga0105237_11433989 3300009545 Bacteria 697
69 Ga0105249_10485297 3300009553 Bacteria 1279
70 Ga0105246_10599683 3300011119 Bacteria 951
71 Ga0157370_10495171 3300013104 Bacteria 1123
72 Ga0157369_11194155 3300013105 Bacteria 776
73 Ga0157374_10142240 3300013296 Bacteria 2329
74 Ga0157378_10002711 3300013297 Bacteria 15769
75 Ga0157378_10088054 3300013297 Bacteria 2817
76 Ga0157378_10876599 3300013297 Unclassified 927
77 Ga0163162_10933969 3300013306 Bacteria 979
78 Ga0157375_10229773 3300013308 Bacteria 2014
79 Ga0157375_10406455 3300013308 Bacteria 1528
80 Ga0157375_10896268 3300013308 Bacteria 1031
81 Ga0157375_11721376 3300013308 Bacteria 742
82 Ga0163163_10066295 3300014325 Bacteria 3585
83 Ga0163163_10168400 3300014325 Bacteria 2237
84 Ga0163163_11143885 3300014325 Bacteria 841
85 Ga0157380_10062501 3300014326 Bacteria 2983
86 Ga0157380_10625667 3300014326 Bacteria 1069
87 Ga0157379_10028156 3300014968 Bacteria 5002
88 Ga0157379_10106782 3300014968 Bacteria 2513
89 Ga0157376_10034597 3300014969 Bacteria 4081
90 Ga0157376_10971098 3300014969 Bacteria 871
91 Ga0213876_10168847 3300021384 Bacteria 1164
92 Ga0207697_10120159 3300025315 Bacteria 1130
93 Ga0207642_10013434 3300025899 Bacteria 2988
94 Ga0207645_10462507 3300025907 Bacteria 857
95 Ga0207643_10097679 3300025908 Bacteria 1719
96 Ga0207707_10081012 3300025912 Bacteria 2834
97 Ga0207662_10072951 3300025918 Bacteria 2081
98 Ga0207681_10147911 3300025923 Bacteria 1757
99 Ga0207650_10424502 3300025925 Bacteria 1104
100 Ga0207687_10018740 3300025927 Bacteria 4575
101 Ga0207687_10085857 3300025927 Unclassified 2284
102 Ga0207706_10059303 3300025933 Bacteria 3370
103 Ga0207686_10503513 3300025934 Bacteria 940
104 Ga0207665_10399235 3300025939 Bacteria 1047
105 Ga0207691_10196987 3300025940 Bacteria 1754
106 Ga0207711_10676173 3300025941 Bacteria 963
107 Ga0207668_10176315 3300025972 Bacteria 1682
108 Ga0207668_10574877 3300025972 Bacteria 979
109 Ga0207703_10216541 3300026035 Bacteria 1710
110 Ga0207708_10238378 3300026075 Bacteria 1462
111 Ga0207648_10009661 3300026089 Bacteria 9224
112 Ga0207675_100053897 3300026118 Bacteria 3752
113 Ga0207675_100353789 3300026118 Bacteria 1440
114 Ga0207683_10357525 3300026121 Bacteria 1341
115 Ga0207683_10358371 3300026121 Bacteria 1339
116 Ga0207683_10937530 3300026121 Unclassified 804
117 Ga0209974_10184903 3300027876 Bacteria 765
118 Ga0268266_10229093 3300028379 Bacteria 1711
119 Ga0268265_10098431 3300028380 Bacteria 2356
120 Ga0268264_10005693 3300028381 Bacteria 10561
121 Ga0268264_10037328 3300028381 Bacteria 4006
122 Ga0265338_10156602 3300028800 Bacteria 1764
123 Ga0265760_10066920 3300031090 Bacteria 1098
124 Ga0265327_10030279 3300031251 Bacteria 3062
125 Ga0316576_10000733 3300031727 Bacteria 16248
126 Ga0316576_10013683 3300031727 Bacteria 5402
127 Ga0316576_10123707 3300031727 Bacteria 1943
128 Ga0316576_10165793 3300031727 Bacteria 1667
129 Ga0316576_10173959 3300031727 Bacteria 1625
130 Ga0316578_10005553 3300031728 Bacteria 6128
131 Ga0316578_10036332 3300031728 Bacteria 2835
132 Ga0316578_10126418 3300031728 Bacteria 1537
133 Ga0316577_10083313 3300031733 Bacteria 1789
134 Ga0316585_10022883 3300032137 Bacteria 1924
135 Ga0316580_10022462 3300032139 Bacteria 1946
136 Ga0373928_0001857 3300035084 Bacteria 4120
137 Ga0373929_0000833 3300035085 Bacteria 5992
138 Ga0373932_0000772 3300035112 Bacteria 9481
139 Ga0373932_0009538 3300035112 Bacteria 2334
140 Ga0316574_0005941 3300035398 Bacteria 6549
141 Ga0316574_0120799 3300035398 Bacteria 1683
142 Ga0316574_0262630 3300035398 Bacteria 1102
143 Ga0373931_0000005 3300035691 Bacteria 480485
144 Ga0373931_0000328 3300035691 Bacteria 19792
145 Ga0316582_0188553 3300036647 Bacteria 1404
146 Ga0316584_0014442 3300036712 Bacteria 5622
147 Ga0316584_0015600 3300036712 Bacteria 5434
148 Ga0316584_0022160 3300036712 Bacteria 4631
149 Ga0373925_0720037 3300037068 Bacteria 823
150 Ga0436365_1152481 3300039437 Bacteria 1568
151 Ga0436360_0877708 3300039438 Bacteria 1063
152 Ga0436362_0556141 3300039453 Bacteria 6784
153 Ga0451797_1411038 3300041453 Bacteria 1328
154 Ga0451795_1372354 3300041456 Bacteria 902
155 Ga0451837_1321497 3300041494 Bacteria 2630
156 Ga0451847_0890106 3300041503 Bacteria 804
157 Ga0451853_2492127 3300041512 Bacteria 1642
158 Ga0451853_4048291 3300041512 Bacteria 775
159 Ga0439432_126868 3300042006 Unclassified 754
160 Ga0439455_0049765 3300042012 Bacteria 1093
161 Ga0450908_015240 3300042184 Bacteria 1378
162 Ga0451577_0009196 3300042876 Bacteria 9533
163 Ga0453684_0006714 3300044712 Bacteria 21692
164 Ga0466959_0191476 3300045049 Bacteria 1427
165 Ga0495629_0091572 3300046459 Bacteria 2122
166 Ga0495629_0377154 3300046459 Bacteria 965
167 Ga0495629_0401915 3300046459 Bacteria 931
168 Ga0495582_0099659 3300046473 Unclassified 1626
169 Ga0495630_0018454 3300046517 Bacteria 5125
170 Ga0495652_0398080 3300046529 Bacteria 976
171 Ga0495586_0142644 3300046535 Bacteria 1345
172 Ga0495667_0109649 3300046559 Bacteria 1783
173 Ga0495588_0110366 3300046674 Bacteria 1449
174 Ga0495599_0322320 3300046678 Bacteria 930
175 Ga0495613_0094041 3300046689 Bacteria 2169
176 Ga0495613_0479331 3300046689 Bacteria 840
177 Ga0495600_0537789 3300046809 Bacteria 715
178 Ga0495604_0250509 3300047317 Unclassified 1207
179 Ga0495676_0199374 3300047321 Bacteria 1391
180 Ga0495676_0552337 3300047321 Unclassified 753
181 Ga0495684_0202469 3300047471 Bacteria 1463
182 Ga0495602_0257820 3300048088 Bacteria 1295
183 Ga0495614_0034391 3300048089 Unclassified 2179
184 Ga0496100_0102895 3300048903 Bacteria 1971
185 Ga0496101_0002986 3300048904 Bacteria 10419
186 Ga0496101_0936848 3300048904 Bacteria 682
187 Ga0496102_0227071 3300048905 Bacteria 1760
188 Ga0496103_0030473 3300048906 Bacteria 3283
189 Ga0496104_0010672 3300048907 Bacteria 8211
190 Ga0496104_0550088 3300048907 Unclassified 1065
191 Ga0496105_0011754 3300048908 Bacteria 6928
192 Ga0496105_0372831 3300048908 Bacteria 1137
193 Ga0496105_0533453 3300048908 Bacteria 918
194 Ga0496106_0027819 3300048909 Bacteria 4210
195 Ga0496107_0023386 3300048910 Bacteria 4370
196 Ga0496108_0032731 3300048911 Bacteria 4318
197 Ga0496109_0122052 3300048912 Bacteria 2428
198 Ga0496109_0610396 3300048912 Bacteria 1027
199 Ga0496110_0003359 3300048913 Bacteria 12218
200 Ga0496110_0016363 3300048913 Bacteria 6192
201 Ga0496111_0012541 3300048914 Bacteria 5743
202 Ga0496114_0005752 3300048917 Bacteria 9733
203 Ga0496114_0044468 3300048917 Bacteria 3685
204 Ga0496114_0517710 3300048917 Bacteria 1055
205 Ga0501031_0054512 3300049568 Bacteria 2605
206 Ga0501034_0000312 3300049571 Bacteria 86122
207 Ga0501034_0003176 3300049571 Bacteria 18899
208 Ga0501034_0007385 3300049571 Bacteria 11705
209 Ga0501034_0023052 3300049571 Bacteria 6345
210 Ga0501036_0047984 3300049572 Bacteria 3616
211 Ga0501036_0436103 3300049572 Bacteria 1092
212 Ga0501036_0451404 3300049572 Bacteria 1071
213 Ga0501037_0022161 3300049573 Bacteria 4701
214 Ga0501037_0309583 3300049573 Bacteria 1095
215 Ga0501038_0067028 3300049574 Bacteria 3055
216 Ga0501039_0164002 3300049575 Bacteria 1747
217 Ga0501039_0370695 3300049575 Bacteria 1125
218 Ga0501040_0031578 3300049576 Bacteria 3581
219 Ga0501040_0218990 3300049576 Unclassified 1354
220 Ga0501041_0043212 3300049577 Bacteria 2740
221 Ga0501041_0072628 3300049577 Bacteria 2114
222 Ga0501042_0078769 3300049578 Bacteria 2360
223 Ga0501042_0121587 3300049578 Bacteria 1880
224 Ga0501042_0321865 3300049578 Bacteria 1117
225 Ga0501048_0073322 3300049582 Bacteria 2416
226 Ga0501048_0123629 3300049582 Bacteria 1829
227 Ga0501048_0179786 3300049582 Unclassified 1499
228 Ga0501048_0181622 3300049582 Bacteria 1491
229 Ga0501048_0354340 3300049582 Bacteria 1047
230 Ga0501048_0429130 3300049582 Bacteria 946
231 Ga0501067_0055197 3300049583 Bacteria 2202
232 Ga0501068_0002651 3300049584 Bacteria 9484
233 Ga0501068_0007664 3300049584 Bacteria 5975
234 Ga0501068_0010783 3300049584 Bacteria 5140
235 Ga0501068_0565182 3300049584 Bacteria 740
236 Ga0501069_0001671 3300049585 Bacteria 11028
237 Ga0501070_0006815 3300049586 Bacteria 9719
238 Ga0501070_0045453 3300049586 Bacteria 3652
239 Ga0501070_0222541 3300049586 Bacteria 1547
240 Ga0501071_0003037 3300049587 Bacteria 10392
241 Ga0501071_0011847 3300049587 Bacteria 5887
242 Ga0501071_0061369 3300049587 Bacteria 2722
243 Ga0501071_0092521 3300049587 Bacteria 2223
244 Ga0501071_0186455 3300049587 Bacteria 1555
245 Ga0501071_0464782 3300049587 Bacteria 969
246 Ga0501072_0007976 3300049588 Bacteria 8035
247 Ga0501072_0020490 3300049588 Bacteria 5125
248 Ga0501072_0048462 3300049588 Bacteria 3346
249 Ga0501073_0001746 3300049589 Bacteria 16147
250 Ga0501073_0007561 3300049589 Bacteria 8073
251 Ga0501074_0003985 3300049590 Bacteria 10525
252 Ga0501074_0030211 3300049590 Bacteria 3927
253 Ga0501074_0064215 3300049590 Bacteria 2644
254 Ga0501074_0088729 3300049590 Bacteria 2215
255 Ga0501074_0311081 3300049590 Bacteria 1119
256 Ga0501075_0011665 3300049591 Bacteria 6225
257 Ga0501075_0024265 3300049591 Bacteria 4444
258 Ga0501076_0011339 3300049592 Bacteria 6637
259 Ga0501076_0075827 3300049592 Bacteria 2696
260 Ga0501076_0093883 3300049592 Bacteria 2415
261 Ga0501076_0377084 3300049592 Bacteria 1166
262 Ga0501079_0054452 3300049741 Bacteria 3086
263 Ga0501079_0074416 3300049741 Bacteria 2625
264 Ga0501080_0002125 3300049742 Bacteria 17212
265 Ga0501080_0034489 3300049742 Bacteria 4725
266 Ga0501081_0161952 3300049743 Bacteria 1612
267 Ga0501083_0000155 3300049744 Bacteria 45460
268 Ga0501035_0719523 3300049822 Bacteria 804
269 Ga0501044_0446202 3300049823 Bacteria 1201
270 Ga0501045_0002725 3300049824 Bacteria 12060
271 Ga0501045_0048292 3300049824 Bacteria 3103
272 nmdc:mga03683_119451_c1 3300050489 Bacteria 1171
273 nmdc:mga03n38_203091_c1 3300050490 Bacteria 1027
274 nmdc:mga03n38_291418_c1 3300050490 Bacteria 874
275 nmdc:mga03n38_59201_c1 3300050490 Bacteria 1738
276 nmdc:mga00v17_10088_c1 3300050491 Bacteria 5144
277 nmdc:mga00v17_625_c1 3300050491 Bacteria 19623
278 nmdc:mga00v17_628471_c1 3300050491 Bacteria 691
279 nmdc:mga00v17_83926_c1 3300050491 Bacteria 1993
280 nmdc:mga0yw44_110627_c1 3300050492 Bacteria 1760
281 nmdc:mga0yw44_12869_c1 3300050492 Bacteria 4380
282 nmdc:mga0yw44_136625_c1 3300050492 Bacteria 1591
283 nmdc:mga0yw44_157327_c1 3300050492 Bacteria 1486
284 nmdc:mga0yw44_23388_c1 3300050492 Bacteria 3481
285 nmdc:mga0yw44_245082_c1 3300050492 Bacteria 1192
286 nmdc:mga0yw44_32828_c1 3300050492 Bacteria 3028
287 nmdc:mga0yw44_410_c1 3300050492 Bacteria 14991
288 nmdc:mga0yw44_723696_c1 3300050492 Bacteria 676
289 nmdc:mga06z11_153695_c1 3300050494 Bacteria 1310
290 nmdc:mga06z11_19192_c1 3300050494 Bacteria 3138
291 nmdc:mga06z11_300635_c1 3300050494 Bacteria 954
292 nmdc:mga09592_950591_c1 3300050508 Bacteria 720
293 Ga0495595_0003751 3300053084 Bacteria 6041
294 Ga0500566_0000568 3300053094 Bacteria 20773
295 Ga0500566_0181268 3300053094 Bacteria 1080
296 Ga0500568_0047941 3300053139 Bacteria 1690
297 Ga0500616_0000813 3300053153 Bacteria 35573
298 Ga0501084_0000044 3300054114 Bacteria 97657
299 Ga0501084_0000314 3300054114 Bacteria 36782
300 Ga0501084_0276471 3300054114 Bacteria 1418
301 Ga0501084_0609540 3300054114 Unclassified 922
302 Ga0501082_0047437 3300060353 Bacteria 3702
303 Ga0501082_0463690 3300060353 Bacteria 1107
304 Ga0501082_0578090 3300060353 Unclassified 983
305 Ga0530510_0019011 3300061734 Bacteria 4874
306 Ga0207665_10117502
307 Ga0070690_100120159
308 Ga0068868_100909305
309 Ga0070687_100048283
310 Ga0070675_100368457
311 Ga0070671_100001047
312 Ga0070674_100250209
313 Ga0070673_100188105
314 Ga0070688_100038208
315 Ga0070688_100092227
316 Ga0070714_100519717
317 Ga0070700_100041131
318 Ga0070678_100432144
319 Ga0070662_100114518
320 Ga0068867_100078921
321 Ga0070685_10052972
322 Ga0070706_100089840
323 Ga0068853_100398327
324 Ga0070672_100170106
325 Ga0070686_100155791
326 Ga0070702_100037526
327 Ga0068859_100436272
328 Ga0068859_100523032
329 Ga0068859_100555644
330 Ga0068861_100056136
331 Ga0068858_100027963
332 Ga0068860_100048008
333 Ga0068860_100270897
334 Ga0068862_100089313
335 Ga0068862_100099065
336 Ga0075365_10000071
337 Ga0075365_10013659
338 Ga0075365_10067572
339 Ga0075365_10240674
340 Ga0075368_10013153
341 Ga0075363_100045942
342 Ga0075363_100173934
343 Ga0075364_10007674
344 Ga0075364_10012934
345 Ga0075364_10023706
346 Ga0075364_10069643
347 Ga0075362_10172660
348 Ga0075367_10056157
349 Ga0075367_10062780
350 Ga0075367_10107071
351 Ga0075367_10246323
352 Ga0075369_10372639
353 Ga0097621_100228725
354 Ga0097621_100724770
355 Ga0068871_100083936
356 Ga0075428_100000110
357 Ga0075428_100266272
358 Ga0068865_100019517
359 Ga0068865_100072798
360 Ga0097620_100436262
361 Ga0097620_100523042
362 Ga0097620_100555628
363 Ga0105245_10013656
364 Ga0105245_10105685
365 Ga0105247_10279630
366 Ga0105243_10019339
367 Ga0105241_10402639
368 Ga0105242_10012235
369 Ga0105242_10067500
370 Ga0105242_10664966
371 Ga0105248_10280900
372 Ga0105248_10388274
373 Ga0105237_11433989
374 Ga0105249_10485297
375 Ga0105246_10599683
376 Ga0157370_10495171
377 Ga0157369_11194155
378 Ga0157374_10142240
379 Ga0157378_10002711
380 Ga0157378_10088054
381 Ga0157378_10876599
382 Ga0163162_10933969
383 Ga0157375_10229773
384 Ga0157375_10406455
385 Ga0157375_10896268
386 Ga0157375_11721376
387 Ga0163163_10066295
388 Ga0163163_10168400
389 Ga0163163_11143885
390 Ga0157380_10062501
391 Ga0157380_10625667
392 Ga0157379_10028156
393 Ga0157379_10106782
394 Ga0157376_10034597
395 Ga0157376_10971098
396 Ga0213876_10168847
397 Ga0207697_10120159
398 Ga0207642_10013434
399 Ga0207645_10462507
400 Ga0207643_10097679
401 Ga0207707_10081012
402 Ga0207662_10072951
403 Ga0207681_10147911
404 Ga0207650_10424502
405 Ga0207687_10018740
406 Ga0207687_10085857
407 Ga0207706_10059303
408 Ga0207686_10503513
409 Ga0207665_10399235
410 Ga0207691_10196987
411 Ga0207711_10676173
412 Ga0207668_10176315
413 Ga0207668_10574877
414 Ga0207703_10216541
415 Ga0207708_10238378
416 Ga0207648_10009661
417 Ga0207675_100053897
418 Ga0207675_100353789
419 Ga0207683_10357525
420 Ga0207683_10358371
421 Ga0207683_10937530
422 Ga0209974_10184903
423 Ga0268266_10229093
424 Ga0268265_10098431
425 Ga0268264_10005693
426 Ga0268264_10037328
427 Ga0265338_10156602
428 Ga0265760_10066920
429 Ga0265327_10030279
430 Ga0316576_10000733
431 Ga0316576_10013683
432 Ga0316576_10123707
433 Ga0316576_10165793
434 Ga0316576_10173959
435 Ga0316578_10005553
436 Ga0316578_10036332
437 Ga0316578_10126418
438 Ga0316577_10083313
439 Ga0316585_10022883
440 Ga0316580_10022462
441 Ga0373928_0001857
442 Ga0373929_0000833
443 Ga0373932_0000772
444 Ga0373932_0009538
445 Ga0316574_0005941
446 Ga0316574_0120799
447 Ga0316574_0262630
448 Ga0373931_0000005
449 Ga0373931_0000328
450 Ga0316582_0188553
451 Ga0316584_0014442
452 Ga0316584_0015600
453 Ga0316584_0022160
454 Ga0373925_0720037
455 Ga0436365_1152481
456 Ga0436360_0877708
457 Ga0436362_0556141
458 Ga0451797_1411038
459 Ga0451795_1372354
460 Ga0451837_1321497
461 Ga0451847_0890106
462 Ga0451853_2492127
463 Ga0451853_4048291
464 Ga0439432_126868
465 Ga0439455_0049765
466 Ga0450908_015240
467 Ga0451577_0009196
468 Ga0453684_0006714
469 Ga0466959_0191476
470 Ga0495629_0091572
471 Ga0495629_0377154
472 Ga0495629_0401915
473 Ga0495582_0099659
474 Ga0495630_0018454
475 Ga0495652_0398080
476 Ga0495586_0142644
477 Ga0495667_0109649
478 Ga0495588_0110366
479 Ga0495599_0322320
480 Ga0495613_0094041
481 Ga0495613_0479331
482 Ga0495600_0537789
483 Ga0495604_0250509
484 Ga0495676_0199374
485 Ga0495676_0552337
486 Ga0495684_0202469
487 Ga0495602_0257820
488 Ga0495614_0034391
489 Ga0496100_0102895
490 Ga0496101_0002986
491 Ga0496101_0936848
492 Ga0496102_0227071
493 Ga0496103_0030473
494 Ga0496104_0010672
495 Ga0496104_0550088
496 Ga0496105_0011754
497 Ga0496105_0372831
498 Ga0496105_0533453
499 Ga0496106_0027819
500 Ga0496107_0023386
501 Ga0496108_0032731
502 Ga0496109_0122052
503 Ga0496109_0610396
504 Ga0496110_0003359
505 Ga0496110_0016363
506 Ga0496111_0012541
507 Ga0496114_0005752
508 Ga0496114_0044468
509 Ga0496114_0517710
510 Ga0501031_0054512
511 Ga0501034_0000312
512 Ga0501034_0003176
513 Ga0501034_0007385
514 Ga0501034_0023052
515 Ga0501036_0047984
516 Ga0501036_0436103
517 Ga0501036_0451404
518 Ga0501037_0022161
519 Ga0501037_0309583
520 Ga0501038_0067028
521 Ga0501039_0164002
522 Ga0501039_0370695
523 Ga0501040_0031578
524 Ga0501040_0218990
525 Ga0501041_0043212
526 Ga0501041_0072628
527 Ga0501042_0078769
528 Ga0501042_0121587
529 Ga0501042_0321865
530 Ga0501048_0073322
531 Ga0501048_0123629
532 Ga0501048_0179786
533 Ga0501048_0181622
534 Ga0501048_0354340
535 Ga0501048_0429130
536 Ga0501067_0055197
537 Ga0501068_0002651
538 Ga0501068_0007664
539 Ga0501068_0010783
540 Ga0501068_0565182
541 Ga0501069_0001671
542 Ga0501070_0006815
543 Ga0501070_0045453
544 Ga0501070_0222541
545 Ga0501071_0003037
546 Ga0501071_0011847
547 Ga0501071_0061369
548 Ga0501071_0092521
549 Ga0501071_0186455
550 Ga0501071_0464782
551 Ga0501072_0007976
552 Ga0501072_0020490
553 Ga0501072_0048462
554 Ga0501073_0001746
555 Ga0501073_0007561
556 Ga0501074_0003985
557 Ga0501074_0030211
558 Ga0501074_0064215
559 Ga0501074_0088729
560 Ga0501074_0311081
561 Ga0501075_0011665
562 Ga0501075_0024265
563 Ga0501076_0011339
564 Ga0501076_0075827
565 Ga0501076_0093883
566 Ga0501076_0377084
567 Ga0501079_0054452
568 Ga0501079_0074416
569 Ga0501080_0002125
570 Ga0501080_0034489
571 Ga0501081_0161952
572 Ga0501083_0000155
573 Ga0501035_0719523
574 Ga0501044_0446202
575 Ga0501045_0002725
576 Ga0501045_0048292
577 nmdc:mga03683_119451_c1
578 nmdc:mga03n38_203091_c1
579 nmdc:mga03n38_291418_c1
580 nmdc:mga03n38_59201_c1
581 nmdc:mga00v17_10088_c1
582 nmdc:mga00v17_625_c1
583 nmdc:mga00v17_628471_c1
584 nmdc:mga00v17_83926_c1
585 nmdc:mga0yw44_110627_c1
586 nmdc:mga0yw44_12869_c1
587 nmdc:mga0yw44_136625_c1
588 nmdc:mga0yw44_157327_c1
589 nmdc:mga0yw44_23388_c1
590 nmdc:mga0yw44_245082_c1
591 nmdc:mga0yw44_32828_c1
592 nmdc:mga0yw44_410_c1
593 nmdc:mga0yw44_723696_c1
594 nmdc:mga06z11_153695_c1
595 nmdc:mga06z11_19192_c1
596 nmdc:mga06z11_300635_c1
597 nmdc:mga09592_950591_c1
598 Ga0495595_0003751
599 Ga0500566_0000568
600 Ga0500566_0181268
601 Ga0500568_0047941
602 Ga0500616_0000813
603 Ga0501084_0000044
604 Ga0501084_0000314
605 Ga0501084_0276471
606 Ga0501084_0609540
607 Ga0501082_0047437
608 Ga0501082_0463690
609 Ga0501082_0578090
610 Ga0530510_0019011

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

61

107

0.97

PF17938

TetR_C_29

Tetracyclin repressor-like, C-terminal domain

130

243

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
4x1e-assembly1.cif.gz_B crystal structure of unliganded e. coli transcriptional regulator rutr, w167a mutant 0.8742 14 201
4w97-assembly1.cif.gz_A structure of ketosteroid transcriptional regulator kstr2 of mycobacterium tuberculosis 0.8616 5 204
4x1e-assembly1.cif.gz_B crystal structure of unliganded e. coli transcriptional regulator rutr, w167a mutant 0.8496 14 201
4w97-assembly1.cif.gz_A structure of ketosteroid transcriptional regulator kstr2 of mycobacterium tuberculosis 0.8453 5 204
2ibd-assembly1.cif.gz_B crystal structure of probable transcriptional regulatory protein rha5900 0.8446 12 167
ID Description Score Start End Superfamily
4xk4A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 1.006 11 58 1.10.10.60
4xk4D01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 1.004 11 58 1.10.10.60
4x1eB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 1.002 14 58 1.10.10.60
3locA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 1 11 58 1.10.10.60
1pb6B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.999 11 58 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A4P5S096-F1-model_v4 HTH tetR-type domain-containing protein 0.9665 2 204 GO:0000976
GO:0003700
AF-A0A4P5S096-F1-model_v4 HTH tetR-type domain-containing protein 0.9572 2 204 GO:0000976
GO:0003700
AF-A0A7K0VGB7-F1-model_v4 TetR family transcriptional regulator 0.9563 2 204 GO:0000976
GO:0003700
AF-A0A6J7QBU9-F1-model_v4 Unannotated protein 0.9483 41 204 GO:0003677
AF-A0A7K0VGB7-F1-model_v4 TetR family transcriptional regulator 0.9472 2 204 GO:0000976
GO:0003700

Map