F398088

General Info

Members Datasets Scaffolds Average Seq Length
305 212 610 276

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10039053|Ga0105240_100390535
Length 337
Sequence MQFFIPVIHHQAIPSGQNGAILEAANATSVETASILAMPPTAGRSSMRIHAIQTGTVRIKKAMASGRGHGLRRRLALYTDSNWTEWLPTYAWAIEHREGVLVVDTGQGAHLLETGKSYHPFLRWEVAFQIEREEEIGPQLRALGIGPSDVKKVVLTHLHMDHDGGLAYFPHSAILAAPGELREASGMAGRIRGYLPNRWPSWFDPLPLDLAAEPLGPFTHSRRLTEAGDIIAVATPGHTANHISVLVQDGDTTLFLAGDTSYDESLMLSGRVDGISASDRVAGSTLSSIKDFVQKRPSIYLPTHDPQSAARLVNRCAVGRPDHTVLPADVALRPGMT

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
70 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
110 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
111 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
112 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
113 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
114 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
115 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
116 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
117 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
118 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
119 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
120 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
121 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
122 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
123 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
124 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
125 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
126 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
127 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
128 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
129 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
130 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
131 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
132 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
133 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
134 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
135 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
136 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
137 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
138 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
139 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
140 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
141 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
142 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
143 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
144 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
145 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
146 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
147 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
148 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
149 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
150 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
151 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
152 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
153 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
154 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
155 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
156 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
157 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
158 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
159 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
160 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
161 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
162 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
163 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
164 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
165 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
166 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
167 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
168 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
169 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
170 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
171 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
172 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
173 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
177 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
178 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
179 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
180 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
181 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
182 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
184 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
185 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
186 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
187 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
188 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
189 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
190 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
191 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
192 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
193 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
194 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
195 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
196 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
197 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
198 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
199 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
200 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
201 2874123672 Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 Isolate Nodule
202 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
203 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
204 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
205 3005710791 Bradyrhizobium genosp. B BDV5040 Isolate Unclassified
206 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
207 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
208 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
209 8016622563 Bradyrhizobium sp. LB13.1 Isolate Nodule
210 8019538911 Bradyrhizobium sp. LB9.1b Isolate Nodule
211 8019668869 Bradyrhizobium sp. GM2.4 Isolate Nodule
212 8019678201 Bradyrhizobium sp. GM0.4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.07
Metatranscriptomes 0
Isolates 3.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.92
Nodule 3.28
Rhizoplane 9.84
Rhizosphere 80
Stem 0
Stem Tuber 0
Unclassified 8.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10039053 3300009093 Bacteria 6082
2 Ga0065712_10076289 3300005290 Bacteria 3688
3 Ga0070658_10027989 3300005327 Bacteria 4524
4 Ga0068869_100071959 3300005334 Bacteria 2561
5 Ga0070680_100101914 3300005336 Bacteria 2383
6 Ga0068868_100212191 3300005338 Bacteria 1618
7 Ga0070660_100051232 3300005339 Bacteria 3178
8 Ga0070660_100069969 3300005339 Bacteria 2738
9 Ga0070661_100019583 3300005344 Bacteria 4823
10 Ga0070661_100324041 3300005344 Bacteria 1204
11 Ga0070668_100166766 3300005347 Bacteria 1790
12 Ga0070669_100051744 3300005353 Bacteria 3003
13 Ga0070675_100090877 3300005354 Bacteria 2557
14 Ga0070675_100216253 3300005354 Unclassified 1667
15 Ga0070671_100311679 3300005355 Unclassified 1340
16 Ga0070674_100060817 3300005356 Bacteria 2634
17 Ga0070673_100282614 3300005364 Unclassified 1456
18 Ga0070673_100428735 3300005364 Bacteria 1187
19 Ga0070659_100073898 3300005366 Bacteria 2714
20 Ga0070659_100379742 3300005366 Bacteria 1190
21 Ga0070667_100113591 3300005367 Bacteria 2351
22 Ga0070711_100124723 3300005439 Bacteria 1910
23 Ga0070663_100017230 3300005455 Bacteria 4710
24 Ga0070678_100028382 3300005456 Bacteria 3816
25 Ga0070678_100148857 3300005456 Bacteria 1883
26 Ga0070681_10074441 3300005458 Bacteria 3357
27 Ga0070698_100082146 3300005471 Bacteria 3215
28 Ga0070699_100076660 3300005518 Bacteria 2910
29 Ga0070679_100079133 3300005530 Bacteria 3276
30 Ga0070679_100133013 3300005530 Bacteria 2468
31 Ga0068853_100007892 3300005539 Bacteria 8537
32 Ga0068853_100105290 3300005539 Bacteria 2499
33 Ga0068853_100125666 3300005539 Bacteria 2291
34 Ga0070665_100035020 3300005548 Bacteria 5050
35 Ga0070665_100077315 3300005548 Bacteria 3334
36 Ga0070665_100227949 3300005548 Bacteria 1863
37 Ga0070665_100376934 3300005548 Bacteria 1426
38 Ga0068855_100212565 3300005563 Bacteria 2172
39 Ga0068855_100302518 3300005563 Bacteria 1771
40 Ga0070664_100025408 3300005564 Bacteria 4909
41 Ga0070664_100069467 3300005564 Bacteria 3014
42 Ga0070664_100259001 3300005564 Bacteria 1565
43 Ga0070664_100474511 3300005564 Bacteria 1151
44 Ga0068854_100047313 3300005578 Bacteria 3065
45 Ga0068854_100577699 3300005578 Bacteria 957
46 Ga0068856_100019355 3300005614 Bacteria 6609
47 Ga0068856_100073292 3300005614 Bacteria 3390
48 Ga0068856_100076794 3300005614 Bacteria 3309
49 Ga0068856_100094343 3300005614 Bacteria 2979
50 Ga0068852_100010120 3300005616 Bacteria 7023
51 Ga0068852_100013701 3300005616 Bacteria 6213
52 Ga0068852_100164655 3300005616 Bacteria 2074
53 Ga0068852_100193034 3300005616 Bacteria 1923
54 Ga0068864_100000348 3300005618 Bacteria 40669
55 Ga0068864_100012507 3300005618 Bacteria 7018
56 Ga0068851_10053767 3300005834 Bacteria 2051
57 Ga0068863_100073869 3300005841 Bacteria 3226
58 Ga0068863_100265662 3300005841 Unclassified 1660
59 Ga0068863_100678023 3300005841 Bacteria 1023
60 Ga0068858_100008975 3300005842 Bacteria 9572
61 Ga0081455_10036494 3300005937 Bacteria 4376
62 Ga0081539_10003332 3300005985 Bacteria 19978
63 Ga0075364_10108141 3300006051 Bacteria 1854
64 Ga0075366_10181224 3300006195 Bacteria 1279
65 Ga0068871_100001563 3300006358 Bacteria 15359
66 Ga0068871_100419168 3300006358 Bacteria 1195
67 Ga0075428_100286304 3300006844 Bacteria 1773
68 Ga0075428_100369463 3300006844 Bacteria 1538
69 Ga0075430_100153434 3300006846 Unclassified 1917
70 Ga0075431_100025582 3300006847 Bacteria 6050
71 Ga0075434_100403683 3300006871 Bacteria 1388
72 Ga0075429_100069111 3300006880 Bacteria 3075
73 Ga0068865_100099792 3300006881 Bacteria 2123
74 Ga0075435_100230420 3300007076 Bacteria 1574
75 Ga0099794_10018158 3300007265 Bacteria 3149
76 Ga0105240_10631987 3300009093 Bacteria 1175
77 Ga0105245_10072885 3300009098 Bacteria 3121
78 Ga0105247_10052079 3300009101 Unclassified 2523
79 Ga0105247_10279210 3300009101 Bacteria 1152
80 Ga0114129_10095213 3300009147 Bacteria 4124
81 Ga0114129_10621377 3300009147 Bacteria 1397
82 Ga0114129_10925519 3300009147 Bacteria 1103
83 Ga0105242_10041160 3300009176 Unclassified 3726
84 Ga0105248_10009084 3300009177 Bacteria 10931
85 Ga0105248_10052543 3300009177 Bacteria 4572
86 Ga0105248_10281484 3300009177 Bacteria 1872
87 Ga0105237_10000768 3300009545 Bacteria 43904
88 Ga0105238_10043911 3300009551 Bacteria 4521
89 Ga0105238_10379777 3300009551 Bacteria 1404
90 Ga0105238_10533297 3300009551 Bacteria 1177
91 Ga0105239_10000846 3300010375 Bacteria 43563
92 Ga0105239_10070926 3300010375 Bacteria 3828
93 Ga0105246_10064410 3300011119 Bacteria 2560
94 Ga0105246_10135138 3300011119 Unclassified 1847
95 Ga0157371_10203710 3300013102 Bacteria 1419
96 Ga0157370_10013599 3300013104 Bacteria 8375
97 Ga0157370_10193274 3300013104 Bacteria 1889
98 Ga0157370_10207991 3300013104 Bacteria 1814
99 Ga0157369_10089028 3300013105 Bacteria 3296
100 Ga0157369_10297928 3300013105 Unclassified 1678
101 Ga0157374_10005695 3300013296 Bacteria 10508
102 Ga0157374_10157207 3300013296 Bacteria 2213
103 Ga0157378_10070151 3300013297 Bacteria 3146
104 Ga0163162_10517699 3300013306 Bacteria 1323
105 Ga0157375_10047394 3300013308 Bacteria 4197
106 Ga0157375_10081996 3300013308 Unclassified 3266
107 Ga0163163_10001676 3300014325 Bacteria 18692
108 Ga0163163_10078276 3300014325 Bacteria 3303
109 Ga0163163_10080658 3300014325 Bacteria 3254
110 Ga0157377_10173499 3300014745 Unclassified 1350
111 Ga0157377_10318406 3300014745 Bacteria 1032
112 Ga0157379_10052905 3300014968 Unclassified 3627
113 Ga0157376_10003740 3300014969 Bacteria 10517
114 Ga0157376_10021900 3300014969 Bacteria 4971
115 Ga0163161_10071016 3300017792 Bacteria 2547
116 Ga0209758_1011450 3300025297 Bacteria 5136
117 Ga0209051_1048510 3300025303 Unclassified 1439
118 Ga0207697_10004734 3300025315 Bacteria 6447
119 Ga0207656_10159143 3300025321 Bacteria 1074
120 Ga0207710_10012182 3300025900 Bacteria 3616
121 Ga0207705_10075965 3300025909 Bacteria 2441
122 Ga0207695_10230080 3300025913 Bacteria 1759
123 Ga0207671_10000361 3300025914 Bacteria 64792
124 Ga0207663_10084419 3300025916 Unclassified 2089
125 Ga0207660_10050339 3300025917 Bacteria 2957
126 Ga0207657_10039391 3300025919 Bacteria 4201
127 Ga0207649_10022688 3300025920 Bacteria 3627
128 Ga0207649_10103151 3300025920 Bacteria 1892
129 Ga0207652_10092405 3300025921 Bacteria 2662
130 Ga0207694_10372641 3300025924 Bacteria 1184
131 Ga0207659_10007191 3300025926 Bacteria 6837
132 Ga0207659_10024773 3300025926 Bacteria 4025
133 Ga0207700_10231229 3300025928 Unclassified 1572
134 Ga0207644_10082376 3300025931 Unclassified 2380
135 Ga0207690_10249158 3300025932 Bacteria 1371
136 Ga0207706_10126938 3300025933 Unclassified 2243
137 Ga0207686_10110735 3300025934 Unclassified 1851
138 Ga0207704_10098595 3300025938 Unclassified 1941
139 Ga0207704_10426093 3300025938 Bacteria 1053
140 Ga0207691_10173893 3300025940 Bacteria 1885
141 Ga0207691_10248354 3300025940 Unclassified 1536
142 Ga0207711_10011464 3300025941 Bacteria 7370
143 Ga0207711_10020735 3300025941 Bacteria 5484
144 Ga0207711_10030554 3300025941 Bacteria 4545
145 Ga0207689_10191880 3300025942 Bacteria 1686
146 Ga0207679_10155845 3300025945 Bacteria 1865
147 Ga0207679_10217757 3300025945 Bacteria 1605
148 Ga0207679_10285117 3300025945 Bacteria 1418
149 Ga0207667_10038502 3300025949 Bacteria 5106
150 Ga0207667_10414805 3300025949 Bacteria 1370
151 Ga0207712_10355704 3300025961 Unclassified 1219
152 Ga0207640_10083911 3300025981 Bacteria 2186
153 Ga0207640_10374661 3300025981 Bacteria 1151
154 Ga0207677_10023788 3300026023 Bacteria 3790
155 Ga0207703_10008231 3300026035 Bacteria 8238
156 Ga0207703_10437451 3300026035 Bacteria 1220
157 Ga0207639_10023642 3300026041 Bacteria 4439
158 Ga0207678_10022348 3300026067 Bacteria 5541
159 Ga0207708_10069729 3300026075 Bacteria 2692
160 Ga0207708_10500759 3300026075 Bacteria 1018
161 Ga0207641_10160393 3300026088 Unclassified 2044
162 Ga0207648_10074781 3300026089 Bacteria 2953
163 Ga0207676_10008375 3300026095 Bacteria 7349
164 Ga0207676_10034782 3300026095 Bacteria 3817
165 Ga0207676_10406152 3300026095 Unclassified 1274
166 Ga0207674_10030401 3300026116 Bacteria 5679
167 Ga0207683_10044819 3300026121 Bacteria 3867
168 Ga0207683_10202731 3300026121 Bacteria 1804
169 Ga0207683_10210716 3300026121 Bacteria 1769
170 Ga0207698_10189092 3300026142 Bacteria 1832
171 Ga0268266_10000086 3300028379 Bacteria 199443
172 Ga0268266_10236162 3300028379 Bacteria 1685
173 Ga0268266_10520306 3300028379 Bacteria 1137
174 Ga0265318_10013179 3300028577 Bacteria 3501
175 Ga0265338_10052083 3300028800 Bacteria 3678
176 Ga0265340_10023856 3300031247 Bacteria 3113
177 Ga0265340_10083552 3300031247 Unclassified 1500
178 Ga0265339_10088399 3300031249 Bacteria 1628
179 Ga0265327_10001511 3300031251 Bacteria 28784
180 Ga0307509_10181081 3300031507 Bacteria 1972
181 Ga0316575_10006789 3300031665 Bacteria 4134
182 Ga0316579_10017536 3300031691 Bacteria 3140
183 Ga0307416_100324468 3300032002 Bacteria 1544
184 Ga0316583_10015163 3300032133 Bacteria 2774
185 Ga0307510_10076219 3300033180 Bacteria 3300
186 Ga0373939_0008975 3300035114 Bacteria 2466
187 Ga0373953_0123233 3300035117 Bacteria 1102
188 Ga0373946_0044346 3300035171 Bacteria 1836
189 Ga0373935_0048703 3300035692 Bacteria 2684
190 Ga0373935_0286910 3300035692 Bacteria 1160
191 Ga0373927_0142483 3300035695 Bacteria 1568
192 Ga0373947_0086643 3300035725 Unclassified 1947
193 Ga0373947_0144848 3300035725 Bacteria 1526
194 Ga0373937_0421464 3300036401 Bacteria 1267
195 Ga0316582_0005028 3300036647 Bacteria 6758
196 Ga0316584_0037137 3300036712 Bacteria 3618
197 Ga0373925_0238270 3300037068 Bacteria 1456
198 Ga0395899_0012629 3300037312 Bacteria 6473
199 Ga0395900_0013957 3300037418 Bacteria 8198
200 Ga0395900_0283001 3300037418 Bacteria 1649
201 Ga0395898_0043370 3300037466 Bacteria 4432
202 Ga0395898_0130473 3300037466 Bacteria 2408
203 Ga0395898_0211976 3300037466 Bacteria 1847
204 Ga0395901_0072305 3300038443 Bacteria 3595
205 Ga0395901_0619115 3300038443 Bacteria 1090
206 Ga0451576_0211679 3300045051 Bacteria 2024
207 Ga0466958_0293137 3300045836 Bacteria 1044
208 Ga0495592_0259850 3300046454 Bacteria 1144
209 Ga0495603_0111027 3300046455 Bacteria 1599
210 Ga0495603_0119344 3300046455 Bacteria 1537
211 Ga0495594_0136602 3300046499 Bacteria 1390
212 Ga0495632_0128102 3300046519 Bacteria 1182
213 Ga0495644_0060850 3300046523 Bacteria 1419
214 Ga0495663_0105236 3300046525 Unclassified 933
215 Ga0495652_0028586 3300046529 Bacteria 4904
216 Ga0495598_0012377 3300046537 Bacteria 2093
217 Ga0495633_0110990 3300046558 Bacteria 1271
218 Ga0495633_0188548 3300046558 Bacteria 948
219 Ga0495656_0034202 3300046615 Bacteria 2079
220 Ga0495611_0097770 3300046648 Bacteria 1361
221 Ga0495611_0154610 3300046648 Bacteria 1071
222 Ga0495625_0100327 3300046660 Bacteria 1990
223 Ga0495635_0253547 3300046663 Bacteria 1186
224 Ga0495647_0033078 3300046681 Bacteria 1931
225 Ga0495613_0310723 3300046689 Bacteria 1090
226 Ga0495604_0115733 3300047317 Bacteria 1948
227 Ga0495636_0088518 3300047318 Bacteria 1342
228 Ga0495674_0337152 3300047319 Bacteria 1226
229 Ga0495672_0084384 3300047320 Bacteria 1762
230 Ga0495684_0214152 3300047471 Bacteria 1415
231 Ga0496101_0008999 3300048904 Bacteria 6546
232 Ga0496102_0007841 3300048905 Bacteria 9121
233 Ga0496103_0244803 3300048906 Bacteria 1154
234 Ga0496104_0023059 3300048907 Bacteria 5720
235 Ga0496104_0043337 3300048907 Bacteria 4226
236 Ga0496104_0136002 3300048907 Bacteria 2361
237 Ga0496105_0015929 3300048908 Bacteria 5996
238 Ga0496106_0307942 3300048909 Bacteria 1271
239 Ga0496107_0041647 3300048910 Bacteria 3298
240 Ga0496108_0001770 3300048911 Bacteria 17206
241 Ga0496108_0076935 3300048911 Bacteria 2821
242 Ga0496109_0108981 3300048912 Bacteria 2574
243 Ga0496109_0323486 3300048912 Bacteria 1456
244 Ga0496110_0013815 3300048913 Bacteria 6691
245 Ga0496110_0209105 3300048913 Unclassified 1774
246 Ga0496111_0007333 3300048914 Bacteria 7218
247 Ga0496112_0014403 3300048915 Bacteria 7333
248 Ga0496112_0022067 3300048915 Bacteria 6062
249 Ga0496112_0028670 3300048915 Bacteria 5376
250 Ga0496112_0032673 3300048915 Bacteria 5053
251 Ga0496112_0242215 3300048915 Bacteria 1756
252 Ga0496112_0644697 3300048915 Bacteria 989
253 Ga0496113_0012840 3300048916 Bacteria 5647
254 Ga0496113_0017606 3300048916 Bacteria 4964
255 Ga0496113_0054771 3300048916 Bacteria 2987
256 Ga0496113_0272445 3300048916 Bacteria 1353
257 Ga0496114_0008164 3300048917 Bacteria 8299
258 Ga0496115_0000157 3300048918 Bacteria 63822
259 Ga0496115_0000209 3300048918 Bacteria 54079
260 Ga0496115_0032510 3300048918 Bacteria 4115
261 Ga0496119_0055157 3300048922 Bacteria 2415
262 Ga0496126_0188443 3300048929 Bacteria 1748
263 Ga0501039_0152220 3300049575 Bacteria 1817
264 Ga0501041_0045930 3300049577 Bacteria 2657
265 Ga0501042_0102365 3300049578 Bacteria 2060
266 Ga0501048_0122555 3300049582 Bacteria 1837
267 Ga0501071_0127492 3300049587 Bacteria 1889
268 Ga0501072_0028564 3300049588 Bacteria 4355
269 Ga0501076_0042033 3300049592 Bacteria 3599
270 Ga0501077_0028711 3300049593 Bacteria 3536
271 Ga0501080_0099165 3300049742 Bacteria 2703
272 Ga0501080_0156728 3300049742 Bacteria 2103
273 Ga0501035_0046402 3300049822 Bacteria 3908
274 Ga0501044_0123848 3300049823 Bacteria 2583
275 nmdc:mga00v17_237904_c1 3300050491 Bacteria 1180
276 nmdc:mga07m45_145823_c1 3300050496 Bacteria 1372
277 nmdc:mga05p37_433899_c1 3300050507 Bacteria 1525
278 nmdc:mga05p37_72181_c1 3300050507 Bacteria 4247
279 nmdc:mga09592_34104_c1 3300050508 Bacteria 3638
280 nmdc:mga0qj67_80010_c1 3300050509 Bacteria 2618
281 nmdc:mga06r32_51725_c1 3300050510 Bacteria 3932
282 Ga0500635_0001754 3300053080 Bacteria 5286
283 Ga0495595_0010917 3300053084 Plasmid 3789
284 Ga0495619_0010883 3300053085 Bacteria 5725
285 Ga0500583_0090361 3300053092 Bacteria 1490
286 Ga0500555_044888 3300053103 Bacteria 1223
287 Ga0500562_013003 3300053108 Bacteria 2120
288 Ga0500595_014840 3300053119 Bacteria 2944
289 Ga0500603_000484 3300053150 Bacteria 10176
290 Ga0500637_0000536 3300053178 Bacteria 14801
291 Ga0500637_0049823 3300053178 Bacteria 2384
292 Ga0500645_032456 3300053730 Bacteria 1565
293 Ga0530510_0133089 3300061734 Bacteria 1830
294 2874127010 2874123672 Bacteria 7238285
295 2935773832 2935769743 Bacteria 7878163
296 2935788732 2935785616 Bacteria 7962367
297 2935795642 2935793552 Bacteria 8012592
298 3005716911 3005710791 Bacteria 7622528
299 8006984399 8006984368 Bacteria 9651211
300 8016608772 8016603502 Bacteria 8731218
301 8016616112 8016613128 Bacteria 8794220
302 8016624887 8016622563 Bacteria 7999408
303 8019546539 8019538911 Bacteria 7872763
304 8019674815 8019668869 Bacteria 8791617
305 8019681277 8019678201 Bacteria 8863603
306 Ga0105240_10039053
307 Ga0065712_10076289
308 Ga0070658_10027989
309 Ga0068869_100071959
310 Ga0070680_100101914
311 Ga0068868_100212191
312 Ga0070660_100051232
313 Ga0070660_100069969
314 Ga0070661_100019583
315 Ga0070661_100324041
316 Ga0070668_100166766
317 Ga0070669_100051744
318 Ga0070675_100090877
319 Ga0070675_100216253
320 Ga0070671_100311679
321 Ga0070674_100060817
322 Ga0070673_100282614
323 Ga0070673_100428735
324 Ga0070659_100073898
325 Ga0070659_100379742
326 Ga0070667_100113591
327 Ga0070711_100124723
328 Ga0070663_100017230
329 Ga0070678_100028382
330 Ga0070678_100148857
331 Ga0070681_10074441
332 Ga0070698_100082146
333 Ga0070699_100076660
334 Ga0070679_100079133
335 Ga0070679_100133013
336 Ga0068853_100007892
337 Ga0068853_100105290
338 Ga0068853_100125666
339 Ga0070665_100035020
340 Ga0070665_100077315
341 Ga0070665_100227949
342 Ga0070665_100376934
343 Ga0068855_100212565
344 Ga0068855_100302518
345 Ga0070664_100025408
346 Ga0070664_100069467
347 Ga0070664_100259001
348 Ga0070664_100474511
349 Ga0068854_100047313
350 Ga0068854_100577699
351 Ga0068856_100019355
352 Ga0068856_100073292
353 Ga0068856_100076794
354 Ga0068856_100094343
355 Ga0068852_100010120
356 Ga0068852_100013701
357 Ga0068852_100164655
358 Ga0068852_100193034
359 Ga0068864_100000348
360 Ga0068864_100012507
361 Ga0068851_10053767
362 Ga0068863_100073869
363 Ga0068863_100265662
364 Ga0068863_100678023
365 Ga0068858_100008975
366 Ga0081455_10036494
367 Ga0081539_10003332
368 Ga0075364_10108141
369 Ga0075366_10181224
370 Ga0068871_100001563
371 Ga0068871_100419168
372 Ga0075428_100286304
373 Ga0075428_100369463
374 Ga0075430_100153434
375 Ga0075431_100025582
376 Ga0075434_100403683
377 Ga0075429_100069111
378 Ga0068865_100099792
379 Ga0075435_100230420
380 Ga0099794_10018158
381 Ga0105240_10631987
382 Ga0105245_10072885
383 Ga0105247_10052079
384 Ga0105247_10279210
385 Ga0114129_10095213
386 Ga0114129_10621377
387 Ga0114129_10925519
388 Ga0105242_10041160
389 Ga0105248_10009084
390 Ga0105248_10052543
391 Ga0105248_10281484
392 Ga0105237_10000768
393 Ga0105238_10043911
394 Ga0105238_10379777
395 Ga0105238_10533297
396 Ga0105239_10000846
397 Ga0105239_10070926
398 Ga0105246_10064410
399 Ga0105246_10135138
400 Ga0157371_10203710
401 Ga0157370_10013599
402 Ga0157370_10193274
403 Ga0157370_10207991
404 Ga0157369_10089028
405 Ga0157369_10297928
406 Ga0157374_10005695
407 Ga0157374_10157207
408 Ga0157378_10070151
409 Ga0163162_10517699
410 Ga0157375_10047394
411 Ga0157375_10081996
412 Ga0163163_10001676
413 Ga0163163_10078276
414 Ga0163163_10080658
415 Ga0157377_10173499
416 Ga0157377_10318406
417 Ga0157379_10052905
418 Ga0157376_10003740
419 Ga0157376_10021900
420 Ga0163161_10071016
421 Ga0209758_1011450
422 Ga0209051_1048510
423 Ga0207697_10004734
424 Ga0207656_10159143
425 Ga0207710_10012182
426 Ga0207705_10075965
427 Ga0207695_10230080
428 Ga0207671_10000361
429 Ga0207663_10084419
430 Ga0207660_10050339
431 Ga0207657_10039391
432 Ga0207649_10022688
433 Ga0207649_10103151
434 Ga0207652_10092405
435 Ga0207694_10372641
436 Ga0207659_10007191
437 Ga0207659_10024773
438 Ga0207700_10231229
439 Ga0207644_10082376
440 Ga0207690_10249158
441 Ga0207706_10126938
442 Ga0207686_10110735
443 Ga0207704_10098595
444 Ga0207704_10426093
445 Ga0207691_10173893
446 Ga0207691_10248354
447 Ga0207711_10011464
448 Ga0207711_10020735
449 Ga0207711_10030554
450 Ga0207689_10191880
451 Ga0207679_10155845
452 Ga0207679_10217757
453 Ga0207679_10285117
454 Ga0207667_10038502
455 Ga0207667_10414805
456 Ga0207712_10355704
457 Ga0207640_10083911
458 Ga0207640_10374661
459 Ga0207677_10023788
460 Ga0207703_10008231
461 Ga0207703_10437451
462 Ga0207639_10023642
463 Ga0207678_10022348
464 Ga0207708_10069729
465 Ga0207708_10500759
466 Ga0207641_10160393
467 Ga0207648_10074781
468 Ga0207676_10008375
469 Ga0207676_10034782
470 Ga0207676_10406152
471 Ga0207674_10030401
472 Ga0207683_10044819
473 Ga0207683_10202731
474 Ga0207683_10210716
475 Ga0207698_10189092
476 Ga0268266_10000086
477 Ga0268266_10236162
478 Ga0268266_10520306
479 Ga0265318_10013179
480 Ga0265338_10052083
481 Ga0265340_10023856
482 Ga0265340_10083552
483 Ga0265339_10088399
484 Ga0265327_10001511
485 Ga0307509_10181081
486 Ga0316575_10006789
487 Ga0316579_10017536
488 Ga0307416_100324468
489 Ga0316583_10015163
490 Ga0307510_10076219
491 Ga0373939_0008975
492 Ga0373953_0123233
493 Ga0373946_0044346
494 Ga0373935_0048703
495 Ga0373935_0286910
496 Ga0373927_0142483
497 Ga0373947_0086643
498 Ga0373947_0144848
499 Ga0373937_0421464
500 Ga0316582_0005028
501 Ga0316584_0037137
502 Ga0373925_0238270
503 Ga0395899_0012629
504 Ga0395900_0013957
505 Ga0395900_0283001
506 Ga0395898_0043370
507 Ga0395898_0130473
508 Ga0395898_0211976
509 Ga0395901_0072305
510 Ga0395901_0619115
511 Ga0451576_0211679
512 Ga0466958_0293137
513 Ga0495592_0259850
514 Ga0495603_0111027
515 Ga0495603_0119344
516 Ga0495594_0136602
517 Ga0495632_0128102
518 Ga0495644_0060850
519 Ga0495663_0105236
520 Ga0495652_0028586
521 Ga0495598_0012377
522 Ga0495633_0110990
523 Ga0495633_0188548
524 Ga0495656_0034202
525 Ga0495611_0097770
526 Ga0495611_0154610
527 Ga0495625_0100327
528 Ga0495635_0253547
529 Ga0495647_0033078
530 Ga0495613_0310723
531 Ga0495604_0115733
532 Ga0495636_0088518
533 Ga0495674_0337152
534 Ga0495672_0084384
535 Ga0495684_0214152
536 Ga0496101_0008999
537 Ga0496102_0007841
538 Ga0496103_0244803
539 Ga0496104_0023059
540 Ga0496104_0043337
541 Ga0496104_0136002
542 Ga0496105_0015929
543 Ga0496106_0307942
544 Ga0496107_0041647
545 Ga0496108_0001770
546 Ga0496108_0076935
547 Ga0496109_0108981
548 Ga0496109_0323486
549 Ga0496110_0013815
550 Ga0496110_0209105
551 Ga0496111_0007333
552 Ga0496112_0014403
553 Ga0496112_0022067
554 Ga0496112_0028670
555 Ga0496112_0032673
556 Ga0496112_0242215
557 Ga0496112_0644697
558 Ga0496113_0012840
559 Ga0496113_0017606
560 Ga0496113_0054771
561 Ga0496113_0272445
562 Ga0496114_0008164
563 Ga0496115_0000157
564 Ga0496115_0000209
565 Ga0496115_0032510
566 Ga0496119_0055157
567 Ga0496126_0188443
568 Ga0501039_0152220
569 Ga0501041_0045930
570 Ga0501042_0102365
571 Ga0501048_0122555
572 Ga0501071_0127492
573 Ga0501072_0028564
574 Ga0501076_0042033
575 Ga0501077_0028711
576 Ga0501080_0099165
577 Ga0501080_0156728
578 Ga0501035_0046402
579 Ga0501044_0123848
580 nmdc:mga00v17_237904_c1
581 nmdc:mga07m45_145823_c1
582 nmdc:mga05p37_433899_c1
583 nmdc:mga05p37_72181_c1
584 nmdc:mga09592_34104_c1
585 nmdc:mga0qj67_80010_c1
586 nmdc:mga06r32_51725_c1
587 Ga0500635_0001754
588 Ga0495595_0010917
589 Ga0495619_0010883
590 Ga0500583_0090361
591 Ga0500555_044888
592 Ga0500562_013003
593 Ga0500595_014840
594 Ga0500603_000484
595 Ga0500637_0000536
596 Ga0500637_0049823
597 Ga0500645_032456
598 Ga0530510_0133089
599 2874127010
600 2935773832
601 2935788732
602 2935795642
603 3005716911
604 8006984399
605 8016608772
606 8016616112
607 8016624887
608 8019546539
609 8019674815
610 8019681277

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00753

Lactamase_B

Metallo-beta-lactamase superfamily

84

304

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2br6-assembly1.cif.gz_A crystal structure of quorum-quenching n-acyl homoserine lactone lactonase 0.8359 2 246
2btn-assembly1.cif.gz_A crystal structure and catalytic mechanism of the quorum-quenching n- acyl homoserine lactone hydrolase 0.8303 2 246
3dha-assembly1.cif.gz_A an ultral high resolution structure of n-acyl homoserine lactone hydrolase with the product n-hexanoyl-l-homoserine bound at an alternative site 0.8008 2 246
5eh9-assembly1.cif.gz_A indirect contributions of mutations underlie optimization of new enzyme function 0.793 2 246
2br6-assembly1.cif.gz_A crystal structure of quorum-quenching n-acyl homoserine lactone lactonase 0.7751 2 246
ID Description Score Start End Superfamily
5ehtA01 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8065 2 246 3.60.15.10
5ehtA01 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.773 2 246 3.60.15.10
3aj0A00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7674 2 247 3.60.15.10
af_P9WLD7_51_309_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7584 1 253 3.60.15.10
af_P9WLD7_51_309_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7397 1 253 3.60.15.10
ID Description Score Start End GO Terms
AF-A0A7S9D420-F1-model_v4 N-acyl homoserine lactonase family protein 0.946 2 259
AF-A0A525I4Z6-F1-model_v4 N-acyl homoserine lactonase family protein 0.944 1 262
AF-K9QRU6-F1-model_v4 Zn-dependent hydrolase, glyoxylase 0.9369 1 258 GO:0016787
AF-A0A2U3D633-F1-model_v4 N-acyl homoserine lactonase family protein 0.9366 1 262
AF-A0A4R2UTE7-F1-model_v4 deleted 0.9363 83 260

Map