F397895

General Info

Members Datasets Scaffolds Average Seq Length
305 191 610 428

Family's Representative Sequence

Representative Sequence 3300003203|JGI25406J46586_10005842|JGI25406J46586_100058422
Length 477
Sequence VSSTEGSGADLHGPRKTHVRWFPVLALIAFGTMLNYLDRTVLGIAAPSLSRDLGLSAATMGIVFSAFSWSYALLQIPGGVFLDRFGPRITYFVAVVGWSGFTAAMGLVNSLATVVTARIGVGTFEAPCFPANSRILASWFPQHERARANAIYAVGQYAGIGFLSVPLFWITQAFGWRALFFVVGAIGIAFGVVWWQLYRGPAESATVNREELDYIEAGGGGDYRGQPLRFRWRNVGALLKHRQIVGASIGQFGGNSTQVFFLTWFPTYLVTARHMTFLTAGAVAAVPYVAASVGGLVGGFASDTLLKKTRSANLARKLPIVSGMLLASSIVAANYVPAGDNVTVIAILSLAFFGQGMTNLGWTVISDVAPKKLIGLTGGIFNFSANLAGIITPIVIGIFYGMTGSFFGPLVYIAIVALIGAFSYSVVLGDIHRLDVDTDDEIERAVLPSSPGAIEMRGGPLWPARADRKGPRRKVRL

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
47 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
48 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
49 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
50 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
51 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
54 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
55 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
56 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
57 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
60 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
61 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
62 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
63 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
67 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
68 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
70 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
71 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
72 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
73 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
74 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
75 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
76 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
77 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
78 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
79 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
80 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
81 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
82 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
83 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
84 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
85 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
137 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
140 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
141 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
142 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
143 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
144 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
145 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
146 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
147 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
148 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
149 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
150 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
151 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
152 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
153 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
154 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
155 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
156 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
157 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
158 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
159 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
160 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
161 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
162 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
163 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
164 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
165 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
166 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
167 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
168 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
169 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
171 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
172 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
173 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
174 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
175 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
176 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
177 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
178 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
179 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
180 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
181 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
182 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
183 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
184 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
185 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
186 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
187 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
188 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
189 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
190 2511231025 Pantoea sp. YR343 Isolate Rhizosphere
191 2876601092 Pantoea endophytica 596 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.34
Metatranscriptomes 0
Isolates 0.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.56
Nodule 0
Rhizoplane 1.97
Rhizosphere 89.51
Stem 0
Stem Tuber 0
Unclassified 2.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10005842 3300003203 Bacteria 5694
2 JGI24740J21852_10001775 3300001979 Bacteria 9895
3 JGI24751J29686_10016109 3300002459 Bacteria 1542
4 JGI25406J46586_10003646 3300003203 Bacteria 7223
5 Ga0065712_10087933 3300005290 Bacteria 2547
6 Ga0065712_10114341 3300005290 Bacteria 1768
7 Ga0065715_10129625 3300005293 Bacteria 2042
8 Ga0065715_10131120 3300005293 Bacteria 1997
9 Ga0065707_10085299 3300005295 Bacteria 6263
10 Ga0065707_10144204 3300005295 Bacteria 1730
11 Ga0070676_10037438 3300005328 Bacteria 2798
12 Ga0070683_100024816 3300005329 Bacteria 5376
13 Ga0070670_100005807 3300005331 Bacteria 10433
14 Ga0070670_100014960 3300005331 Bacteria 6659
15 Ga0070670_100017529 3300005331 Bacteria 6144
16 Ga0070670_100176048 3300005331 Bacteria 1857
17 Ga0068869_100011831 3300005334 Bacteria 5740
18 Ga0068869_100023564 3300005334 Bacteria 4254
19 Ga0068869_100131259 3300005334 Bacteria 1926
20 Ga0070689_100048598 3300005340 Bacteria 3272
21 Ga0070691_10003480 3300005341 Bacteria 7089
22 Ga0070692_10001710 3300005345 Bacteria 8161
23 Ga0070669_100003700 3300005353 Bacteria 11034
24 Ga0070669_100033407 3300005353 Bacteria 3721
25 Ga0070669_100063562 3300005353 Bacteria 2717
26 Ga0070675_100000372 3300005354 Bacteria 30308
27 Ga0070674_100035480 3300005356 Bacteria 3340
28 Ga0070688_100025964 3300005365 Bacteria 3474
29 Ga0070688_100083441 3300005365 Bacteria 2074
30 Ga0070667_100018628 3300005367 Bacteria 5759
31 Ga0070667_100139918 3300005367 Bacteria 2119
32 Ga0070713_100012394 3300005436 Bacteria 6251
33 Ga0070701_10019561 3300005438 Bacteria 3199
34 Ga0070701_10052005 3300005438 Bacteria 2126
35 Ga0070705_100019393 3300005440 Bacteria 3580
36 Ga0070700_100051335 3300005441 Bacteria 2567
37 Ga0070694_100018488 3300005444 Bacteria 4423
38 Ga0070708_100033385 3300005445 Bacteria 4471
39 Ga0068867_100002242 3300005459 Bacteria 13587
40 Ga0070707_100007403 3300005468 Bacteria 10195
41 Ga0070707_100104501 3300005468 Bacteria 2745
42 Ga0070699_100007541 3300005518 Bacteria 9463
43 Ga0070699_100048253 3300005518 Bacteria 3684
44 Ga0070684_100053615 3300005535 Bacteria 3512
45 Ga0070697_100034045 3300005536 Bacteria 4105
46 Ga0070695_100071399 3300005545 Bacteria 2274
47 Ga0070696_100004497 3300005546 Bacteria 9308
48 Ga0070696_100071216 3300005546 Bacteria 2446
49 Ga0070693_100027598 3300005547 Bacteria 3080
50 Ga0070665_100002052 3300005548 Bacteria 22656
51 Ga0070665_100018925 3300005548 Bacteria 6908
52 Ga0070665_100020540 3300005548 Bacteria 6635
53 Ga0070665_100262882 3300005548 Bacteria 1727
54 Ga0070704_100001762 3300005549 Bacteria 11846
55 Ga0070704_100027535 3300005549 Bacteria 3772
56 Ga0070704_100035956 3300005549 Bacteria 3371
57 Ga0068855_100020710 3300005563 Bacteria 7887
58 Ga0068855_100167813 3300005563 Bacteria 2487
59 Ga0068857_100011845 3300005577 Bacteria 7587
60 Ga0068856_100020248 3300005614 Bacteria 6461
61 Ga0068856_100139617 3300005614 Unclassified 2430
62 Ga0070702_100031851 3300005615 Bacteria 2888
63 Ga0070702_100052281 3300005615 Bacteria 2342
64 Ga0070702_100108534 3300005615 Bacteria 1716
65 Ga0068859_100068948 3300005617 Bacteria 3571
66 Ga0068859_100102307 3300005617 Bacteria 2922
67 Ga0068859_100116257 3300005617 Bacteria 2739
68 Ga0068864_100115035 3300005618 Bacteria 2399
69 Ga0068864_100117326 3300005618 Bacteria 2376
70 Ga0068861_100110668 3300005719 Bacteria 2200
71 Ga0068863_100002195 3300005841 Bacteria 19378
72 Ga0068863_100075564 3300005841 Bacteria 3187
73 Ga0068858_100015010 3300005842 Bacteria 7289
74 Ga0068858_100079167 3300005842 Bacteria 3054
75 Ga0068862_100003708 3300005844 Bacteria 13056
76 Ga0068862_100092652 3300005844 Bacteria 2634
77 Ga0068862_100194373 3300005844 Bacteria 1827
78 Ga0081539_10000025 3300005985 Bacteria 340255
79 Ga0081539_10000065 3300005985 Bacteria 246571
80 Ga0081539_10004127 3300005985 Bacteria 16537
81 Ga0081539_10032445 3300005985 Bacteria 3198
82 Ga0070717_10090219 3300006028 Bacteria 2586
83 Ga0075365_10045038 3300006038 Bacteria 2893
84 Ga0075364_10018811 3300006051 Bacteria 4330
85 Ga0075364_10018953 3300006051 Bacteria 4315
86 Ga0075362_10000518 3300006177 Bacteria 11249
87 Ga0075367_10009702 3300006178 Bacteria 5043
88 Ga0075367_10010772 3300006178 Bacteria 4814
89 Ga0075366_10041042 3300006195 Bacteria 2738
90 Ga0075366_10056634 3300006195 Bacteria 2328
91 Ga0097621_100053927 3300006237 Bacteria 3277
92 Ga0097621_100058877 3300006237 Unclassified 3144
93 Ga0075370_10014044 3300006353 Bacteria 4265
94 Ga0068871_100000891 3300006358 Bacteria 19913
95 Ga0068871_100125728 3300006358 Bacteria 2170
96 Ga0075433_10000570 3300006852 Bacteria 24365
97 Ga0075433_10017978 3300006852 Bacteria 5866
98 Ga0075434_100006701 3300006871 Bacteria 10581
99 Ga0075434_100036471 3300006871 Bacteria 4864
100 Ga0075434_100247331 3300006871 Bacteria 1803
101 Ga0068865_100019486 3300006881 Bacteria 4391
102 Ga0097620_100068946 3300006931 Bacteria 3571
103 Ga0097620_100102305 3300006931 Bacteria 2922
104 Ga0097620_100116253 3300006931 Bacteria 2739
105 Ga0075435_100007550 3300007076 Bacteria 7765
106 Ga0075435_100081823 3300007076 Bacteria 2653
107 Ga0099794_10042726 3300007265 Bacteria 2162
108 Ga0105251_10004071 3300009011 Bacteria 10261
109 Ga0105244_10014070 3300009036 Bacteria 4643
110 Ga0105250_10007819 3300009092 Bacteria 4575
111 Ga0105240_10015032 3300009093 Bacteria 10538
112 Ga0105240_10027381 3300009093 Bacteria 7462
113 Ga0111539_10000413 3300009094 Bacteria 53529
114 Ga0111539_10000767 3300009094 Bacteria 41841
115 Ga0111539_10011781 3300009094 Bacteria 10963
116 Ga0111539_10018591 3300009094 Bacteria 8609
117 Ga0111539_10041334 3300009094 Bacteria 5544
118 Ga0111539_10080521 3300009094 Bacteria 3831
119 Ga0111539_10083736 3300009094 Bacteria 3750
120 Ga0111539_10115605 3300009094 Bacteria 3146
121 Ga0111539_10182632 3300009094 Bacteria 2450
122 Ga0111539_10358280 3300009094 Bacteria 1698
123 Ga0105245_10035452 3300009098 Bacteria 4428
124 Ga0105247_10005784 3300009101 Bacteria 7743
125 Ga0114129_10005228 3300009147 Bacteria 18287
126 Ga0114129_10021247 3300009147 Bacteria 9217
127 Ga0114129_10329032 3300009147 Bacteria 2029
128 Ga0105243_10059806 3300009148 Bacteria 3042
129 Ga0105242_10007549 3300009176 Bacteria 8368
130 Ga0105242_10082276 3300009176 Bacteria 2694
131 Ga0105242_10171807 3300009176 Bacteria 1905
132 Ga0105248_10013350 3300009177 Bacteria 9040
133 Ga0105248_10055013 3300009177 Bacteria 4463
134 Ga0105248_10131634 3300009177 Bacteria 2822
135 Ga0105248_10138402 3300009177 Bacteria 2746
136 Ga0105237_10026838 3300009545 Bacteria 5886
137 Ga0105238_10416517 3300009551 Unclassified 1338
138 Ga0105249_10002082 3300009553 Bacteria 17350
139 Ga0105239_10303824 3300010375 Bacteria 1797
140 Ga0157373_10000219 3300013100 Bacteria 46927
141 Ga0157370_10079254 3300013104 Bacteria 3093
142 Ga0157369_10141276 3300013105 Bacteria 2548
143 Ga0157374_10349781 3300013296 Bacteria 1468
144 Ga0163162_10145409 3300013306 Bacteria 2487
145 Ga0163163_10368247 3300014325 Bacteria 1494
146 Ga0157380_10038468 3300014326 Bacteria 3715
147 Ga0157376_10083391 3300014969 Unclassified 2749
148 Ga0157376_10147748 3300014969 Bacteria 2116
149 Ga0163161_10068204 3300017792 Bacteria 2598
150 Ga0207697_10000386 3300025315 Bacteria 24721
151 Ga0207697_10037341 3300025315 Bacteria 1990
152 Ga0207656_10030434 3300025321 Bacteria 2230
153 Ga0207713_1030743 3300025735 Bacteria 2387
154 Ga0207710_10005934 3300025900 Bacteria 5240
155 Ga0207688_10003360 3300025901 Bacteria 8737
156 Ga0207688_10064862 3300025901 Bacteria 2063
157 Ga0207680_10060837 3300025903 Bacteria 2301
158 Ga0207647_10006484 3300025904 Bacteria 8504
159 Ga0207699_10119725 3300025906 Bacteria 1701
160 Ga0207645_10042727 3300025907 Bacteria 2900
161 Ga0207645_10074788 3300025907 Bacteria 2169
162 Ga0207705_10001451 3300025909 Bacteria 18917
163 Ga0207707_10022384 3300025912 Bacteria 5525
164 Ga0207695_10017500 3300025913 Bacteria 8338
165 Ga0207695_10088080 3300025913 Bacteria 3126
166 Ga0207693_10161223 3300025915 Bacteria 1764
167 Ga0207660_10025582 3300025917 Bacteria 4008
168 Ga0207662_10004177 3300025918 Bacteria 7566
169 Ga0207662_10064300 3300025918 Bacteria 2207
170 Ga0207657_10003661 3300025919 Bacteria 16361
171 Ga0207649_10014313 3300025920 Bacteria 4439
172 Ga0207652_10002630 3300025921 Bacteria 15077
173 Ga0207646_10016469 3300025922 Bacteria 6935
174 Ga0207646_10035312 3300025922 Bacteria 4515
175 Ga0207646_10090618 3300025922 Bacteria 2737
176 Ga0207681_10002147 3300025923 Bacteria 12579
177 Ga0207650_10010600 3300025925 Bacteria 6330
178 Ga0207650_10065913 3300025925 Bacteria 2715
179 Ga0207650_10087489 3300025925 Bacteria 2374
180 Ga0207659_10001505 3300025926 Bacteria 13861
181 Ga0207659_10109983 3300025926 Unclassified 2093
182 Ga0207687_10091876 3300025927 Bacteria 2215
183 Ga0207700_10020991 3300025928 Bacteria 4450
184 Ga0207644_10019555 3300025931 Bacteria 4595
185 Ga0207644_10025897 3300025931 Bacteria 4036
186 Ga0207644_10074970 3300025931 Bacteria 2485
187 Ga0207690_10117825 3300025932 Bacteria 1923
188 Ga0207706_10055127 3300025933 Bacteria 3506
189 Ga0207686_10106144 3300025934 Bacteria 1885
190 Ga0207670_10203164 3300025936 Bacteria 1507
191 Ga0207669_10013464 3300025937 Bacteria 4064
192 Ga0207669_10081209 3300025937 Bacteria 2076
193 Ga0207704_10002598 3300025938 Bacteria 8145
194 Ga0207691_10018705 3300025940 Bacteria 6562
195 Ga0207691_10032697 3300025940 Bacteria 4849
196 Ga0207691_10062082 3300025940 Bacteria 3392
197 Ga0207711_10016972 3300025941 Bacteria 6047
198 Ga0207711_10025528 3300025941 Bacteria 4956
199 Ga0207711_10034283 3300025941 Bacteria 4300
200 Ga0207689_10033870 3300025942 Bacteria 4243
201 Ga0207689_10183726 3300025942 Bacteria 1724
202 Ga0207689_10237654 3300025942 Bacteria 1506
203 Ga0207661_10005554 3300025944 Bacteria 8895
204 Ga0207661_10007804 3300025944 Bacteria 7622
205 Ga0207679_10016447 3300025945 Bacteria 4914
206 Ga0207667_10042528 3300025949 Bacteria 4828
207 Ga0207651_10207873 3300025960 Bacteria 1573
208 Ga0207640_10066056 3300025981 Bacteria 2416
209 Ga0207658_10088136 3300025986 Bacteria 2398
210 Ga0207677_10039282 3300026023 Bacteria 3111
211 Ga0207677_10061720 3300026023 Bacteria 2597
212 Ga0207703_10012328 3300026035 Bacteria 6664
213 Ga0207703_10013943 3300026035 Bacteria 6265
214 Ga0207678_10000754 3300026067 Bacteria 29592
215 Ga0207708_10017636 3300026075 Bacteria 5375
216 Ga0207702_10128029 3300026078 Bacteria 2282
217 Ga0207641_10001723 3300026088 Bacteria 21130
218 Ga0207641_10111508 3300026088 Bacteria 2426
219 Ga0207648_10004385 3300026089 Bacteria 14510
220 Ga0207676_10081986 3300026095 Bacteria 2622
221 Ga0207674_10006340 3300026116 Bacteria 13926
222 Ga0207675_100096545 3300026118 Bacteria 2782
223 Ga0207683_10076448 3300026121 Bacteria 2964
224 Ga0207683_10245108 3300026121 Bacteria 1635
225 Ga0207683_10316686 3300026121 Bacteria 1428
226 Ga0207428_10000765 3300027907 Bacteria 36585
227 Ga0207428_10074694 3300027907 Unclassified 2658
228 Ga0268266_10001170 3300028379 Bacteria 32423
229 Ga0268266_10001805 3300028379 Bacteria 24257
230 Ga0268266_10009606 3300028379 Bacteria 8506
231 Ga0268266_10084428 3300028379 Bacteria 2773
232 Ga0268264_10258217 3300028381 Bacteria 1622
233 Ga0307407_10044933 3300031903 Bacteria 2493
234 Ga0373941_0022982 3300035115 Bacteria 1776
235 Ga0316574_0003780 3300035398 Bacteria 7845
236 Ga0373924_0067054 3300035410 Bacteria 1509
237 Ga0373935_0160312 3300035692 Bacteria 1533
238 Ga0373937_0002492 3300036401 Bacteria 15304
239 Ga0373937_0101374 3300036401 Bacteria 2672
240 Ga0436364_0714352 3300037853 Bacteria 5046
241 Ga0395901_0196639 3300038443 Bacteria 2114
242 Ga0436363_1406047 3300039450 Bacteria 6273
243 Ga0439434_0015091 3300042435 Bacteria 2302
244 Ga0451577_0197440 3300042876 Bacteria 1816
245 Ga0466972_0031847 3300044658 Unclassified 2592
246 Ga0453683_0220724 3300044673 Bacteria 1205
247 Ga0466966_0006617 3300044684 Bacteria 7671
248 Ga0466961_0000383 3300044693 Bacteria 28540
249 Ga0453684_0245550 3300044712 Bacteria 2059
250 Ga0451576_0011337 3300045051 Bacteria 10144
251 Ga0451576_0084372 3300045051 Bacteria 3304
252 Ga0451576_0208532 3300045051 Bacteria 2041
253 Ga0495659_0012446 3300046664 Bacteria 2755
254 Ga0495588_0049398 3300046674 Bacteria 2163
255 Ga0495647_0010679 3300046681 Bacteria 3131
256 Ga0495658_0181486 3300046683 Bacteria 1306
257 Ga0495636_0002878 3300047318 Bacteria 6645
258 Ga0496108_0249562 3300048911 Unclassified 1544
259 Ga0496109_0062772 3300048912 Bacteria 3398
260 Ga0496111_0119935 3300048914 Bacteria 1943
261 Ga0496112_0023723 3300048915 Bacteria 5869
262 Ga0496112_0109793 3300048915 Bacteria 2728
263 Ga0496113_0095667 3300048916 Bacteria 2296
264 Ga0496122_0008098 3300048925 Bacteria 11455
265 Ga0496123_0005414 3300048926 Bacteria 12859
266 Ga0496124_0039493 3300048927 Bacteria 4091
267 Ga0501034_0003554 3300049571 Bacteria 17715
268 Ga0501068_0021408 3300049584 Bacteria 3775
269 Ga0501072_0135223 3300049588 Bacteria 1965
270 Ga0501073_0006209 3300049589 Bacteria 8914
271 Ga0501079_0125579 3300049741 Bacteria 1996
272 Ga0501083_0097954 3300049744 Bacteria 1935
273 nmdc:mga03683_7953_c1 3300050489 Bacteria 3706
274 nmdc:mga03n38_24955_c1 3300050490 Bacteria 2449
275 nmdc:mga00v17_120789_c1 3300050491 Bacteria 1668
276 nmdc:mga00v17_16052_c1 3300050491 Bacteria 4216
277 nmdc:mga00v17_2065_c1 3300050491 Bacteria 10346
278 nmdc:mga0k408_12853_c2 3300050493 Bacteria 3306
279 nmdc:mga0k408_18511_c1 3300050493 Bacteria 2732
280 nmdc:mga05p37_153153_c1 3300050507 Bacteria 2819
281 nmdc:mga05p37_30779_c1 3300050507 Bacteria 6550
282 nmdc:mga05p37_53031_c1 3300050507 Bacteria 4988
283 nmdc:mga05p37_56586_c1 3300050507 Bacteria 4829
284 nmdc:mga09592_129518_c1 3300050508 Bacteria 2170
285 nmdc:mga09592_167660_c1 3300050508 Bacteria 1898
286 nmdc:mga08y16_13821_c1 3300050511 Bacteria 8497
287 nmdc:mga08y16_19898_c1 3300050511 Bacteria 7080
288 nmdc:mga08y16_2997_c1 3300050511 Bacteria 17422
289 nmdc:mga08y16_45945_c1 3300050511 Bacteria 4574
290 nmdc:mga08y16_90162_c1 3300050511 Bacteria 3195
291 nmdc:mga0n895_1291_c1 3300050512 Bacteria 18532
292 nmdc:mga0n895_130158_c1 3300050512 Bacteria 2541
293 nmdc:mga0rr50_38876_c1 3300050513 Bacteria 3447
294 nmdc:mga08x19_12937_c1 3300050514 Bacteria 5037
295 nmdc:mga0a205_118119_c1 3300050515 Bacteria 2550
296 nmdc:mga0a205_2761_c1 3300050515 Bacteria 15511
297 nmdc:mga0a205_46608_c1 3300050515 Bacteria 4181
298 nmdc:mga0a205_78686_c1 3300050515 Bacteria 3185
299 Ga0495595_0041870 3300053084 Bacteria 2098
300 Ga0500652_019903 3300053131 Bacteria 2502
301 Ga0500616_0000129 3300053153 Bacteria 134221
302 Ga0500616_0020137 3300053153 Bacteria 3752
303 Ga0500637_0053275 3300053178 Bacteria 2309
304 2511379510 2511231025 Bacteria 5324661
305 2876604191 2876601092 Bacteria 5114497
306 JGI25406J46586_10005842
307 JGI24740J21852_10001775
308 JGI24751J29686_10016109
309 JGI25406J46586_10003646
310 Ga0065712_10087933
311 Ga0065712_10114341
312 Ga0065715_10129625
313 Ga0065715_10131120
314 Ga0065707_10085299
315 Ga0065707_10144204
316 Ga0070676_10037438
317 Ga0070683_100024816
318 Ga0070670_100005807
319 Ga0070670_100014960
320 Ga0070670_100017529
321 Ga0070670_100176048
322 Ga0068869_100011831
323 Ga0068869_100023564
324 Ga0068869_100131259
325 Ga0070689_100048598
326 Ga0070691_10003480
327 Ga0070692_10001710
328 Ga0070669_100003700
329 Ga0070669_100033407
330 Ga0070669_100063562
331 Ga0070675_100000372
332 Ga0070674_100035480
333 Ga0070688_100025964
334 Ga0070688_100083441
335 Ga0070667_100018628
336 Ga0070667_100139918
337 Ga0070713_100012394
338 Ga0070701_10019561
339 Ga0070701_10052005
340 Ga0070705_100019393
341 Ga0070700_100051335
342 Ga0070694_100018488
343 Ga0070708_100033385
344 Ga0068867_100002242
345 Ga0070707_100007403
346 Ga0070707_100104501
347 Ga0070699_100007541
348 Ga0070699_100048253
349 Ga0070684_100053615
350 Ga0070697_100034045
351 Ga0070695_100071399
352 Ga0070696_100004497
353 Ga0070696_100071216
354 Ga0070693_100027598
355 Ga0070665_100002052
356 Ga0070665_100018925
357 Ga0070665_100020540
358 Ga0070665_100262882
359 Ga0070704_100001762
360 Ga0070704_100027535
361 Ga0070704_100035956
362 Ga0068855_100020710
363 Ga0068855_100167813
364 Ga0068857_100011845
365 Ga0068856_100020248
366 Ga0068856_100139617
367 Ga0070702_100031851
368 Ga0070702_100052281
369 Ga0070702_100108534
370 Ga0068859_100068948
371 Ga0068859_100102307
372 Ga0068859_100116257
373 Ga0068864_100115035
374 Ga0068864_100117326
375 Ga0068861_100110668
376 Ga0068863_100002195
377 Ga0068863_100075564
378 Ga0068858_100015010
379 Ga0068858_100079167
380 Ga0068862_100003708
381 Ga0068862_100092652
382 Ga0068862_100194373
383 Ga0081539_10000025
384 Ga0081539_10000065
385 Ga0081539_10004127
386 Ga0081539_10032445
387 Ga0070717_10090219
388 Ga0075365_10045038
389 Ga0075364_10018811
390 Ga0075364_10018953
391 Ga0075362_10000518
392 Ga0075367_10009702
393 Ga0075367_10010772
394 Ga0075366_10041042
395 Ga0075366_10056634
396 Ga0097621_100053927
397 Ga0097621_100058877
398 Ga0075370_10014044
399 Ga0068871_100000891
400 Ga0068871_100125728
401 Ga0075433_10000570
402 Ga0075433_10017978
403 Ga0075434_100006701
404 Ga0075434_100036471
405 Ga0075434_100247331
406 Ga0068865_100019486
407 Ga0097620_100068946
408 Ga0097620_100102305
409 Ga0097620_100116253
410 Ga0075435_100007550
411 Ga0075435_100081823
412 Ga0099794_10042726
413 Ga0105251_10004071
414 Ga0105244_10014070
415 Ga0105250_10007819
416 Ga0105240_10015032
417 Ga0105240_10027381
418 Ga0111539_10000413
419 Ga0111539_10000767
420 Ga0111539_10011781
421 Ga0111539_10018591
422 Ga0111539_10041334
423 Ga0111539_10080521
424 Ga0111539_10083736
425 Ga0111539_10115605
426 Ga0111539_10182632
427 Ga0111539_10358280
428 Ga0105245_10035452
429 Ga0105247_10005784
430 Ga0114129_10005228
431 Ga0114129_10021247
432 Ga0114129_10329032
433 Ga0105243_10059806
434 Ga0105242_10007549
435 Ga0105242_10082276
436 Ga0105242_10171807
437 Ga0105248_10013350
438 Ga0105248_10055013
439 Ga0105248_10131634
440 Ga0105248_10138402
441 Ga0105237_10026838
442 Ga0105238_10416517
443 Ga0105249_10002082
444 Ga0105239_10303824
445 Ga0157373_10000219
446 Ga0157370_10079254
447 Ga0157369_10141276
448 Ga0157374_10349781
449 Ga0163162_10145409
450 Ga0163163_10368247
451 Ga0157380_10038468
452 Ga0157376_10083391
453 Ga0157376_10147748
454 Ga0163161_10068204
455 Ga0207697_10000386
456 Ga0207697_10037341
457 Ga0207656_10030434
458 Ga0207713_1030743
459 Ga0207710_10005934
460 Ga0207688_10003360
461 Ga0207688_10064862
462 Ga0207680_10060837
463 Ga0207647_10006484
464 Ga0207699_10119725
465 Ga0207645_10042727
466 Ga0207645_10074788
467 Ga0207705_10001451
468 Ga0207707_10022384
469 Ga0207695_10017500
470 Ga0207695_10088080
471 Ga0207693_10161223
472 Ga0207660_10025582
473 Ga0207662_10004177
474 Ga0207662_10064300
475 Ga0207657_10003661
476 Ga0207649_10014313
477 Ga0207652_10002630
478 Ga0207646_10016469
479 Ga0207646_10035312
480 Ga0207646_10090618
481 Ga0207681_10002147
482 Ga0207650_10010600
483 Ga0207650_10065913
484 Ga0207650_10087489
485 Ga0207659_10001505
486 Ga0207659_10109983
487 Ga0207687_10091876
488 Ga0207700_10020991
489 Ga0207644_10019555
490 Ga0207644_10025897
491 Ga0207644_10074970
492 Ga0207690_10117825
493 Ga0207706_10055127
494 Ga0207686_10106144
495 Ga0207670_10203164
496 Ga0207669_10013464
497 Ga0207669_10081209
498 Ga0207704_10002598
499 Ga0207691_10018705
500 Ga0207691_10032697
501 Ga0207691_10062082
502 Ga0207711_10016972
503 Ga0207711_10025528
504 Ga0207711_10034283
505 Ga0207689_10033870
506 Ga0207689_10183726
507 Ga0207689_10237654
508 Ga0207661_10005554
509 Ga0207661_10007804
510 Ga0207679_10016447
511 Ga0207667_10042528
512 Ga0207651_10207873
513 Ga0207640_10066056
514 Ga0207658_10088136
515 Ga0207677_10039282
516 Ga0207677_10061720
517 Ga0207703_10012328
518 Ga0207703_10013943
519 Ga0207678_10000754
520 Ga0207708_10017636
521 Ga0207702_10128029
522 Ga0207641_10001723
523 Ga0207641_10111508
524 Ga0207648_10004385
525 Ga0207676_10081986
526 Ga0207674_10006340
527 Ga0207675_100096545
528 Ga0207683_10076448
529 Ga0207683_10245108
530 Ga0207683_10316686
531 Ga0207428_10000765
532 Ga0207428_10074694
533 Ga0268266_10001170
534 Ga0268266_10001805
535 Ga0268266_10009606
536 Ga0268266_10084428
537 Ga0268264_10258217
538 Ga0307407_10044933
539 Ga0373941_0022982
540 Ga0316574_0003780
541 Ga0373924_0067054
542 Ga0373935_0160312
543 Ga0373937_0002492
544 Ga0373937_0101374
545 Ga0436364_0714352
546 Ga0395901_0196639
547 Ga0436363_1406047
548 Ga0439434_0015091
549 Ga0451577_0197440
550 Ga0466972_0031847
551 Ga0453683_0220724
552 Ga0466966_0006617
553 Ga0466961_0000383
554 Ga0453684_0245550
555 Ga0451576_0011337
556 Ga0451576_0084372
557 Ga0451576_0208532
558 Ga0495659_0012446
559 Ga0495588_0049398
560 Ga0495647_0010679
561 Ga0495658_0181486
562 Ga0495636_0002878
563 Ga0496108_0249562
564 Ga0496109_0062772
565 Ga0496111_0119935
566 Ga0496112_0023723
567 Ga0496112_0109793
568 Ga0496113_0095667
569 Ga0496122_0008098
570 Ga0496123_0005414
571 Ga0496124_0039493
572 Ga0501034_0003554
573 Ga0501068_0021408
574 Ga0501072_0135223
575 Ga0501073_0006209
576 Ga0501079_0125579
577 Ga0501083_0097954
578 nmdc:mga03683_7953_c1
579 nmdc:mga03n38_24955_c1
580 nmdc:mga00v17_120789_c1
581 nmdc:mga00v17_16052_c1
582 nmdc:mga00v17_2065_c1
583 nmdc:mga0k408_12853_c2
584 nmdc:mga0k408_18511_c1
585 nmdc:mga05p37_153153_c1
586 nmdc:mga05p37_30779_c1
587 nmdc:mga05p37_53031_c1
588 nmdc:mga05p37_56586_c1
589 nmdc:mga09592_129518_c1
590 nmdc:mga09592_167660_c1
591 nmdc:mga08y16_13821_c1
592 nmdc:mga08y16_19898_c1
593 nmdc:mga08y16_2997_c1
594 nmdc:mga08y16_45945_c1
595 nmdc:mga08y16_90162_c1
596 nmdc:mga0n895_1291_c1
597 nmdc:mga0n895_130158_c1
598 nmdc:mga0rr50_38876_c1
599 nmdc:mga08x19_12937_c1
600 nmdc:mga0a205_118119_c1
601 nmdc:mga0a205_2761_c1
602 nmdc:mga0a205_46608_c1
603 nmdc:mga0a205_78686_c1
604 Ga0495595_0041870
605 Ga0500652_019903
606 Ga0500616_0000129
607 Ga0500616_0020137
608 Ga0500637_0053275
609 2511379510
610 2876604191

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

28

393

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
6e9n-assembly2.cif.gz_B e. coli d-galactonate:proton symporter in the inward open form 0.9082 44 445
6e9n-assembly2.cif.gz_B e. coli d-galactonate:proton symporter in the inward open form 0.8828 44 445
8dwi-assembly1.cif.gz_A molecular mechanism of sialic acid transport mediated by sialin 0.8585 38 437
6e9o-assembly1.cif.gz_B e. coli d-galactonate:proton symporter mutant e133q in the outward substrate-bound form 0.8435 44 437
6e9o-assembly2.cif.gz_A e. coli d-galactonate:proton symporter mutant e133q in the outward substrate-bound form 0.8428 44 437
ID Description Score Start End Superfamily
af_Q46916_243_446_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9712 253 437 1.20.1250.20
af_P0AA76_9_204_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9447 44 229 1.20.1250.20
af_P0AA76_234_429_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9414 256 443 1.20.1250.20
af_Q53WP9_334_529_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9331 255 437 1.20.1250.20
af_B6T9A5_232_433_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9235 263 437 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A6C9QF22-F1-model_v4 MFS transporter 0.8901 45 175 GO:0005886
GO:0022857
AF-A0A4U0WG99-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.8813 44 220 GO:0004497
GO:0005506
GO:0016020
GO:0016125
GO:0016705
GO:0020037
GO:0022857
AF-A0A7R9PNC4-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.877 33 212 GO:0016020
GO:0022857
AF-A0A2N5A4Y4-F1-model_v4 MFS transporter 0.8767 60 256 GO:0005886
GO:0022857
AF-A0A7V4ZR78-F1-model_v4 MFS transporter 0.8755 35 437 GO:0016020
GO:0022857

Map