F397527

General Info

Members Datasets Scaffolds Average Seq Length
304 190 608 567

Family's Representative Sequence

Representative Sequence 3300006914|Ga0075436_100007355|Ga0075436_1000073557
Length 621
Sequence MDEPTIPIRPLADTKPAAKRAKAPRTEALTQAKSQTEQGIDTRIEPWLSRPAPKPEGAAFKPETAAEAWLGLLAARGVEYLFANGGTDFAPVVEAYAKGQTQAWRLPKIVIVPHENMGVAMAHGYTMVTGKPQAMMVHVGVGTANSMNGLINASRQNIPILFTAGRTPITESGALPAARNNYIHWAQEHFDQGGMLREFMKWDYELRHAEQVETVIDRALAIAKSEPQGPVYVTLPREVLASSFSRELSKTATISAATPPAADLQALEQAAKALGNAQRPLLITANGGRTIESARAIEHLAQGLAVPVIHYRPRYLALSTEHPMQCGWDPHMLLKDADVVLVVDCDVPWIPKEGAPRSDAKVIHIGPDPLFARYPLRGFRTDVALTGALAPTLEALWRAAQKQAASVKLIEARRKVLTELSEATRKKARAGVEPVPNVITGKWLSACINKLLDERSVLINEYPTVLEEMVITEPGRYFGNASAGGLGWVKLAAPDKTVIAALGDGAYMFGNPTAGHYVSEAMRLPVLFIIANNARWAAVHRSTLATYPKGHAAAMKQPPFATLEPSPRFEHVIRASGGHGEAVKEPKELMPALERALKVVKEEKRQALVNVQLEASYVKTS

Samples

Sample ID Description Type Environment
1 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
62 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
89 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
90 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
91 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
92 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
93 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
94 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
95 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
96 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
97 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
98 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
99 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
100 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
101 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
102 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
103 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
104 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
105 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
106 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
107 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
108 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
109 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
110 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
111 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
112 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
113 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
114 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
115 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
116 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
117 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
118 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
119 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
125 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
126 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
127 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
128 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
129 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
130 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
131 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
132 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
133 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
134 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
135 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
136 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
137 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
138 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
139 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
140 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
141 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
142 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
143 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
144 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
145 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
146 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
147 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
148 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
149 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
150 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
151 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
152 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
153 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
154 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
155 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
156 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
157 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
158 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
159 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
166 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
167 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
168 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
169 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
170 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
171 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
172 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
173 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
174 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
178 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
179 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
180 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
181 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
182 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
183 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
184 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
185 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
186 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
187 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
188 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
189 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
190 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.67
Metatranscriptomes 0
Isolates 0.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.33
Nodule 0
Rhizoplane 0.99
Rhizosphere 97.37
Stem 0
Stem Tuber 0
Unclassified 2.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075436_100007355 3300006914 Bacteria 7526
2 Ga0065707_10089230 3300005295 Bacteria 4431
3 Ga0070690_100001783 3300005330 Bacteria 11384
4 Ga0068869_100002060 3300005334 Bacteria 12087
5 Ga0070680_100003307 3300005336 Bacteria 12031
6 Ga0070680_100061670 3300005336 Bacteria 3070
7 Ga0070682_100040985 3300005337 Bacteria 2852
8 Ga0068868_100003770 3300005338 Bacteria 10581
9 Ga0070689_100001092 3300005340 Bacteria 17023
10 Ga0070689_100022296 3300005340 Bacteria 4727
11 Ga0070689_100040978 3300005340 Bacteria 3553
12 Ga0070691_10010672 3300005341 Bacteria 4195
13 Ga0070691_10014764 3300005341 Bacteria 3586
14 Ga0070687_100000798 3300005343 Bacteria 10475
15 Ga0070692_10008138 3300005345 Bacteria 4660
16 Ga0070668_100010594 3300005347 Bacteria 6856
17 Ga0070669_100027046 3300005353 Bacteria 4128
18 Ga0070709_10038460 3300005434 Bacteria 2929
19 Ga0070714_100022091 3300005435 Bacteria 5214
20 Ga0070701_10000854 3300005438 Bacteria 10926
21 Ga0070705_100000473 3300005440 Bacteria 23135
22 Ga0070700_100002518 3300005441 Bacteria 9342
23 Ga0070700_100008846 3300005441 Bacteria 5502
24 Ga0070694_100000058 3300005444 Bacteria 52128
25 Ga0070694_100006524 3300005444 Bacteria 7087
26 Ga0070708_100003235 3300005445 Bacteria 12708
27 Ga0070681_10000135 3300005458 Bacteria 56156
28 Ga0070681_10070317 3300005458 Bacteria 3466
29 Ga0068867_100000522 3300005459 Bacteria 25489
30 Ga0068867_100015392 3300005459 Bacteria 5424
31 Ga0070706_100014368 3300005467 Bacteria 7317
32 Ga0070706_100039513 3300005467 Bacteria 4356
33 Ga0070706_100040824 3300005467 Bacteria 4284
34 Ga0070706_100092740 3300005467 Bacteria 2802
35 Ga0070699_100031697 3300005518 Bacteria 4564
36 Ga0070686_100002127 3300005544 Bacteria 10911
37 Ga0070695_100000891 3300005545 Bacteria 16128
38 Ga0070695_100002038 3300005545 Bacteria 11541
39 Ga0070695_100021446 3300005545 Bacteria 3954
40 Ga0070695_100090053 3300005545 Bacteria 2047
41 Ga0070696_100000008 3300005546 Bacteria 101365
42 Ga0070696_100010630 3300005546 Bacteria 6165
43 Ga0070696_100087123 3300005546 Bacteria 2218
44 Ga0070693_100000008 3300005547 Bacteria 80726
45 Ga0070704_100015915 3300005549 Bacteria 4738
46 Ga0070704_100024920 3300005549 Bacteria 3931
47 Ga0068854_100003486 3300005578 Bacteria 9827
48 Ga0068856_100007752 3300005614 Bacteria 10485
49 Ga0070702_100000062 3300005615 Bacteria 31206
50 Ga0068859_100003274 3300005617 Bacteria 16483
51 Ga0068866_10019250 3300005718 Bacteria 3103
52 Ga0068861_100000643 3300005719 Bacteria 20757
53 Ga0068861_100002708 3300005719 Bacteria 11594
54 Ga0068861_100074957 3300005719 Bacteria 2633
55 Ga0068858_100036744 3300005842 Bacteria 4542
56 Ga0081455_10000267 3300005937 Bacteria 68735
57 Ga0081540_1000112 3300005983 Bacteria 86810
58 Ga0081539_10000803 3300005985 Bacteria 61113
59 Ga0097621_100012215 3300006237 Bacteria 6356
60 Ga0068871_100000682 3300006358 Bacteria 23114
61 Ga0068871_100054008 3300006358 Bacteria 3258
62 Ga0075428_100000028 3300006844 Bacteria 119875
63 Ga0075428_100000615 3300006844 Bacteria 36398
64 Ga0075428_100033309 3300006844 Bacteria 5689
65 Ga0075428_100073239 3300006844 Bacteria 3741
66 Ga0075428_100131670 3300006844 Bacteria 2720
67 Ga0075430_100000051 3300006846 Bacteria 61002
68 Ga0075430_100000249 3300006846 Bacteria 37298
69 Ga0075430_100000762 3300006846 Bacteria 24850
70 Ga0075431_100000583 3300006847 Bacteria 30922
71 Ga0075431_100097134 3300006847 Bacteria 3041
72 Ga0075433_10000285 3300006852 Bacteria 30208
73 Ga0075434_100000002 3300006871 Bacteria 135661
74 Ga0075434_100002625 3300006871 Bacteria 15852
75 Ga0075434_100009462 3300006871 Bacteria 9085
76 Ga0075434_100011949 3300006871 Bacteria 8213
77 Ga0075434_100036278 3300006871 Bacteria 4877
78 Ga0075434_100069048 3300006871 Bacteria 3522
79 Ga0075429_100000041 3300006880 Bacteria 58461
80 Ga0075429_100000150 3300006880 Bacteria 43105
81 Ga0075429_100104765 3300006880 Bacteria 2471
82 Ga0068865_100001702 3300006881 Bacteria 12899
83 Ga0068865_100008006 3300006881 Bacteria 6525
84 Ga0075436_100000541 3300006914 Bacteria 24664
85 Ga0075436_100000939 3300006914 Bacteria 19466
86 Ga0075436_100014347 3300006914 Bacteria 5425
87 Ga0097620_100003274 3300006931 Bacteria 16483
88 Ga0075435_100000089 3300007076 Bacteria 48555
89 Ga0111539_10021289 3300009094 Bacteria 7984
90 Ga0111539_10093934 3300009094 Bacteria 3523
91 Ga0111539_10096311 3300009094 Bacteria 3476
92 Ga0111539_10109288 3300009094 Bacteria 3245
93 Ga0111539_10113471 3300009094 Bacteria 3178
94 Ga0105245_10000776 3300009098 Bacteria 28947
95 Ga0114129_10000534 3300009147 Bacteria 46594
96 Ga0114129_10004978 3300009147 Bacteria 18719
97 Ga0114129_10018008 3300009147 Bacteria 10059
98 Ga0114129_10093067 3300009147 Bacteria 4176
99 Ga0114129_10116257 3300009147 Bacteria 3686
100 Ga0114129_10221100 3300009147 Bacteria 2554
101 Ga0105242_10019069 3300009176 Bacteria 5374
102 Ga0105249_10000709 3300009553 Bacteria 30226
103 Ga0105249_10011784 3300009553 Bacteria 7686
104 Ga0157378_10005811 3300013297 Bacteria 10814
105 Ga0163162_10118432 3300013306 Bacteria 2750
106 Ga0157380_10004906 3300014326 Bacteria 9322
107 Ga0157376_10006552 3300014969 Bacteria 8238
108 Ga0163161_10063544 3300017792 Unclassified 2691
109 Ga0213875_10000392 3300021388 Bacteria 38933
110 Ga0207699_10036926 3300025906 Bacteria 2789
111 Ga0207643_10020087 3300025908 Bacteria 3664
112 Ga0207684_10014593 3300025910 Bacteria 6770
113 Ga0207684_10032162 3300025910 Bacteria 4462
114 Ga0207684_10043888 3300025910 Bacteria 3791
115 Ga0207660_10003868 3300025917 Bacteria 9754
116 Ga0207646_10002247 3300025922 Bacteria 22994
117 Ga0207646_10042970 3300025922 Bacteria 4060
118 Ga0207681_10001649 3300025923 Bacteria 14372
119 Ga0207687_10004203 3300025927 Bacteria 9630
120 Ga0207686_10001994 3300025934 Bacteria 11251
121 Ga0207670_10002287 3300025936 Bacteria 10036
122 Ga0207669_10008103 3300025937 Bacteria 4914
123 Ga0207689_10001217 3300025942 Bacteria 24753
124 Ga0207651_10085692 3300025960 Unclassified 2287
125 Ga0207712_10002554 3300025961 Bacteria 11690
126 Ga0207668_10012627 3300025972 Bacteria 5177
127 Ga0207640_10007328 3300025981 Bacteria 6091
128 Ga0207677_10010070 3300026023 Bacteria 5336
129 Ga0207703_10016161 3300026035 Bacteria 5817
130 Ga0207703_10018059 3300026035 Bacteria 5509
131 Ga0207708_10036977 3300026075 Bacteria 3718
132 Ga0207702_10031065 3300026078 Bacteria 4452
133 Ga0207648_10000708 3300026089 Bacteria 37374
134 Ga0207675_100001101 3300026118 Bacteria 26742
135 Ga0207675_100004841 3300026118 Bacteria 12969
136 Ga0209967_1000769 3300027364 Bacteria 4103
137 Ga0209967_1001023 3300027364 Bacteria 3576
138 Ga0210000_1000491 3300027462 Bacteria 5430
139 Ga0207428_10006810 3300027907 Bacteria 10480
140 Ga0268265_10010257 3300028380 Bacteria 6328
141 Ga0268264_10094720 3300028381 Bacteria 2582
142 Ga0265337_1000425 3300028556 Bacteria 22414
143 Ga0265334_10000790 3300028573 Bacteria 15826
144 Ga0265338_10012325 3300028800 Bacteria 9754
145 Ga0307408_100020333 3300031548 Bacteria 4479
146 Ga0307408_100121339 3300031548 Bacteria 2025
147 Ga0316579_10013669 3300031691 Bacteria 3494
148 Ga0316578_10003240 3300031728 Bacteria 7389
149 Ga0316577_10013985 3300031733 Bacteria 4401
150 Ga0316583_10005948 3300032133 Bacteria 4382
151 Ga0316583_10006716 3300032133 Bacteria 4145
152 Ga0316585_10002801 3300032137 Bacteria 4740
153 Ga0316580_10001939 3300032139 Bacteria 5575
154 Ga0373958_0010345 3300034819 Bacteria 1555
155 Ga0373938_0004101 3300034957 Bacteria 2412
156 Ga0373928_0010388 3300035084 Bacteria 1829
157 Ga0373940_0017790 3300035088 Unclassified 1775
158 Ga0373944_0023494 3300035089 Bacteria 1799
159 Ga0373951_0000936 3300035091 Bacteria 7850
160 Ga0373951_0007652 3300035091 Archaea 2453
161 Ga0373932_0002201 3300035112 Bacteria 5029
162 Ga0373939_0006353 3300035114 Unclassified 2847
163 Ga0373956_0017224 3300035119 Bacteria 3044
164 Ga0373957_0010649 3300035120 Bacteria 3047
165 Ga0373962_0004845 3300035242 Bacteria 3251
166 Ga0316574_0030041 3300035398 Bacteria 3287
167 Ga0373924_0020341 3300035410 Bacteria 2579
168 Ga0373931_0000123 3300035691 Bacteria 34923
169 Ga0373931_0000949 3300035691 Bacteria 12188
170 Ga0373931_0001520 3300035691 Bacteria 9988
171 Ga0373931_0011052 3300035691 Bacteria 4353
172 Ga0373931_0014265 3300035691 Bacteria 3881
173 Ga0373931_0036988 3300035691 Bacteria 2547
174 Ga0373935_0013373 3300035692 Bacteria 4951
175 Ga0373927_0064963 3300035695 Bacteria 2360
176 Ga0373933_0001013 3300035724 Bacteria 17051
177 Ga0373947_0046705 3300035725 Bacteria 2593
178 Ga0373937_0000696 3300036401 Bacteria 29326
179 Ga0373937_0006865 3300036401 Bacteria 9822
180 Ga0373937_0013128 3300036401 Bacteria 7295
181 Ga0316582_0010666 3300036647 Bacteria 5041
182 Ga0316584_0029347 3300036712 Bacteria 4059
183 Ga0316584_0079701 3300036712 Bacteria 2454
184 Ga0373925_0089406 3300037068 Bacteria 2352
185 Ga0395900_0013933 3300037418 Bacteria 8205
186 Ga0395898_0006589 3300037466 Bacteria 12387
187 Ga0436364_1223128 3300037853 Bacteria 3047
188 Ga0436364_1331333 3300037853 Bacteria 94585
189 Ga0395901_0001066 3300038443 Bacteria 29429
190 Ga0400483_134192 3300039062 Bacteria 4663
191 Ga0439441_000225 3300042001 Bacteria 5379
192 Ga0439434_0000663 3300042435 Bacteria 9890
193 Ga0439435_0000131 3300042436 Bacteria 9923
194 Ga0439460_0002940 3300042461 Bacteria 4107
195 Ga0451577_0016355 3300042876 Bacteria 6872
196 Ga0451576_0001013 3300045051 Bacteria 51916
197 Ga0451576_0156019 3300045051 Bacteria 2381
198 Ga0466967_0209241 3300045976 Bacteria 1849
199 Ga0495592_0031573 3300046454 Bacteria 4002
200 Ga0495603_0007405 3300046455 Bacteria 6599
201 Ga0495580_0008226 3300046472 Bacteria 8300
202 Ga0495582_0068382 3300046473 Bacteria 1963
203 Ga0495582_0069199 3300046473 Bacteria 1951
204 Ga0495639_0009074 3300046475 Bacteria 4265
205 Ga0495628_0004277 3300046516 Bacteria 12699
206 Ga0495630_0010914 3300046517 Bacteria 6562
207 Ga0495630_0100950 3300046517 Bacteria 2183
208 Ga0495666_0004404 3300046526 Bacteria 7119
209 Ga0495652_0060655 3300046529 Bacteria 3196
210 Ga0495665_0008169 3300046531 Bacteria 5675
211 Ga0495665_0016915 3300046531 Bacteria 3924
212 Ga0495586_0003458 3300046535 Bacteria 8466
213 Ga0495586_0006032 3300046535 Bacteria 6480
214 Ga0495586_0043798 3300046535 Bacteria 2410
215 Ga0495598_0002350 3300046537 Bacteria 3897
216 Ga0495598_0012304 3300046537 Unclassified 2097
217 Ga0495667_0057441 3300046559 Bacteria 2557
218 Ga0495634_0011436 3300046642 Bacteria 6464
219 Ga0495588_0001118 3300046674 Bacteria 11547
220 Ga0495599_0026712 3300046678 Bacteria 3619
221 Ga0495647_0000296 3300046681 Bacteria 13906
222 Ga0495658_0003865 3300046683 Bacteria 7413
223 Ga0495658_0006613 3300046683 Bacteria 5696
224 Ga0495669_0004586 3300046684 Bacteria 5721
225 Ga0495613_0002300 3300046689 Bacteria 14468
226 Ga0495624_0087215 3300046690 Bacteria 1927
227 Ga0495600_0012090 3300046809 Bacteria 5391
228 Ga0495636_0002185 3300047318 Bacteria 7500
229 Ga0495680_0005343 3300047322 Bacteria 12118
230 Ga0496102_0065638 3300048905 Bacteria 3327
231 Ga0496103_0069222 3300048906 Bacteria 2206
232 Ga0496109_0173456 3300048912 Bacteria 2024
233 Ga0501038_0008010 3300049574 Bacteria 9734
234 Ga0501038_0068973 3300049574 Bacteria 3005
235 Ga0501039_0019102 3300049575 Bacteria 5258
236 Ga0501040_0002097 3300049576 Bacteria 12849
237 Ga0501040_0017819 3300049576 Bacteria 4714
238 Ga0501041_0003333 3300049577 Bacteria 9241
239 Ga0501041_0049997 3300049577 Bacteria 2547
240 Ga0501041_0065623 3300049577 Bacteria 2224
241 Ga0501046_0038713 3300049580 Bacteria 3824
242 Ga0501048_0016567 3300049582 Bacteria 5435
243 Ga0501070_0069216 3300049586 Bacteria 2922
244 Ga0501072_0002206 3300049588 Bacteria 14549
245 Ga0501072_0002762 3300049588 Bacteria 13194
246 Ga0501072_0040917 3300049588 Bacteria 3640
247 Ga0501073_0013479 3300049589 Bacteria 5946
248 Ga0501074_0042692 3300049590 Bacteria 3281
249 Ga0501075_0001436 3300049591 Bacteria 15479
250 Ga0501076_0000152 3300049592 Bacteria 39703
251 Ga0501076_0049910 3300049592 Bacteria 3310
252 Ga0501079_0059408 3300049741 Bacteria 2949
253 Ga0501079_0062398 3300049741 Bacteria 2875
254 Ga0501080_0020337 3300049742 Bacteria 6143
255 Ga0501080_0061105 3300049742 Bacteria 3508
256 Ga0501081_0020724 3300049743 Bacteria 4384
257 Ga0501081_0024084 3300049743 Bacteria 4087
258 Ga0501081_0090064 3300049743 Unclassified 2156
259 Ga0501081_0090683 3300049743 Bacteria 2149
260 Ga0501044_0008480 3300049823 Bacteria 11266
261 Ga0501045_0103560 3300049824 Unclassified 2108
262 nmdc:mga05p37_102185_c1 3300050507 Bacteria 3530
263 nmdc:mga05p37_122169_c1 3300050507 Bacteria 3198
264 nmdc:mga05p37_155952_c1 3300050507 Bacteria 2790
265 nmdc:mga05p37_32839_c1 3300050507 Bacteria 6352
266 nmdc:mga05p37_453_c1 3300050507 Bacteria 44606
267 nmdc:mga09592_1204_c1 3300050508 Bacteria 20724
268 nmdc:mga09592_24371_c1 3300050508 Bacteria 5003
269 nmdc:mga09592_8273_c1 3300050508 Bacteria 8463
270 nmdc:mga0qj67_116930_c1 3300050509 Unclassified 2155
271 nmdc:mga0qj67_2155_c1 3300050509 Bacteria 13987
272 nmdc:mga0qj67_4601_c1 3300050509 Bacteria 10006
273 nmdc:mga0qj67_9148_c1 3300050509 Bacteria 7354
274 nmdc:mga06r32_3123_c1 3300050510 Bacteria 14829
275 nmdc:mga06r32_48736_c1 3300050510 Bacteria 4050
276 nmdc:mga08y16_183361_c1 3300050511 Bacteria 2173
277 nmdc:mga08y16_1936_c1 3300050511 Bacteria 21123
278 nmdc:mga08y16_29927_c1 3300050511 Bacteria 5734
279 nmdc:mga08y16_64104_c1 3300050511 Bacteria 3838
280 nmdc:mga08y16_90231_c1 3300050511 Bacteria 3194
281 nmdc:mga0n895_12031_c1 3300050512 Bacteria 7746
282 nmdc:mga0n895_137626_c1 3300050512 Bacteria 2469
283 nmdc:mga0n895_1551_c1 3300050512 Bacteria 17250
284 nmdc:mga0n895_16018_c1 3300050512 Bacteria 6866
285 nmdc:mga0n895_738_c1 3300050512 Bacteria 23103
286 nmdc:mga0rr50_1345_c1 3300050513 Bacteria 13410
287 nmdc:mga08x19_17910_c1 3300050514 Bacteria 4336
288 nmdc:mga08x19_2328_c1 3300050514 Bacteria 11523
289 nmdc:mga08x19_2944_c1 3300050514 Bacteria 10240
290 nmdc:mga08x19_33822_c2 3300050514 Bacteria 2587
291 nmdc:mga0a205_1116_c1 3300050515 Bacteria 22232
292 nmdc:mga0a205_19197_c1 3300050515 Bacteria 6443
293 nmdc:mga0a205_24894_c1 3300050515 Bacteria 5696
294 nmdc:mga0a205_56911_c1 3300050515 Bacteria 3775
295 Ga0500641_0001210 3300053096 Bacteria 9210
296 Ga0501084_0022489 3300054114 Bacteria 5261
297 Ga0501084_0059282 3300054114 Bacteria 3204
298 Ga0501084_0087317 3300054114 Bacteria 2619
299 Ga0590071_011205 3300059421 Bacteria 2099
300 Ga0501082_0010887 3300060353 Bacteria 7831
301 Ga0501082_0081158 3300060353 Bacteria 2799
302 Ga0530510_0001389 3300061734 Bacteria 16239
303 Ga0530510_0027407 3300061734 Bacteria 4082
304 2883577157 2883577096 Bacteria 4709178
305 Ga0075436_100007355
306 Ga0065707_10089230
307 Ga0070690_100001783
308 Ga0068869_100002060
309 Ga0070680_100003307
310 Ga0070680_100061670
311 Ga0070682_100040985
312 Ga0068868_100003770
313 Ga0070689_100001092
314 Ga0070689_100022296
315 Ga0070689_100040978
316 Ga0070691_10010672
317 Ga0070691_10014764
318 Ga0070687_100000798
319 Ga0070692_10008138
320 Ga0070668_100010594
321 Ga0070669_100027046
322 Ga0070709_10038460
323 Ga0070714_100022091
324 Ga0070701_10000854
325 Ga0070705_100000473
326 Ga0070700_100002518
327 Ga0070700_100008846
328 Ga0070694_100000058
329 Ga0070694_100006524
330 Ga0070708_100003235
331 Ga0070681_10000135
332 Ga0070681_10070317
333 Ga0068867_100000522
334 Ga0068867_100015392
335 Ga0070706_100014368
336 Ga0070706_100039513
337 Ga0070706_100040824
338 Ga0070706_100092740
339 Ga0070699_100031697
340 Ga0070686_100002127
341 Ga0070695_100000891
342 Ga0070695_100002038
343 Ga0070695_100021446
344 Ga0070695_100090053
345 Ga0070696_100000008
346 Ga0070696_100010630
347 Ga0070696_100087123
348 Ga0070693_100000008
349 Ga0070704_100015915
350 Ga0070704_100024920
351 Ga0068854_100003486
352 Ga0068856_100007752
353 Ga0070702_100000062
354 Ga0068859_100003274
355 Ga0068866_10019250
356 Ga0068861_100000643
357 Ga0068861_100002708
358 Ga0068861_100074957
359 Ga0068858_100036744
360 Ga0081455_10000267
361 Ga0081540_1000112
362 Ga0081539_10000803
363 Ga0097621_100012215
364 Ga0068871_100000682
365 Ga0068871_100054008
366 Ga0075428_100000028
367 Ga0075428_100000615
368 Ga0075428_100033309
369 Ga0075428_100073239
370 Ga0075428_100131670
371 Ga0075430_100000051
372 Ga0075430_100000249
373 Ga0075430_100000762
374 Ga0075431_100000583
375 Ga0075431_100097134
376 Ga0075433_10000285
377 Ga0075434_100000002
378 Ga0075434_100002625
379 Ga0075434_100009462
380 Ga0075434_100011949
381 Ga0075434_100036278
382 Ga0075434_100069048
383 Ga0075429_100000041
384 Ga0075429_100000150
385 Ga0075429_100104765
386 Ga0068865_100001702
387 Ga0068865_100008006
388 Ga0075436_100000541
389 Ga0075436_100000939
390 Ga0075436_100014347
391 Ga0097620_100003274
392 Ga0075435_100000089
393 Ga0111539_10021289
394 Ga0111539_10093934
395 Ga0111539_10096311
396 Ga0111539_10109288
397 Ga0111539_10113471
398 Ga0105245_10000776
399 Ga0114129_10000534
400 Ga0114129_10004978
401 Ga0114129_10018008
402 Ga0114129_10093067
403 Ga0114129_10116257
404 Ga0114129_10221100
405 Ga0105242_10019069
406 Ga0105249_10000709
407 Ga0105249_10011784
408 Ga0157378_10005811
409 Ga0163162_10118432
410 Ga0157380_10004906
411 Ga0157376_10006552
412 Ga0163161_10063544
413 Ga0213875_10000392
414 Ga0207699_10036926
415 Ga0207643_10020087
416 Ga0207684_10014593
417 Ga0207684_10032162
418 Ga0207684_10043888
419 Ga0207660_10003868
420 Ga0207646_10002247
421 Ga0207646_10042970
422 Ga0207681_10001649
423 Ga0207687_10004203
424 Ga0207686_10001994
425 Ga0207670_10002287
426 Ga0207669_10008103
427 Ga0207689_10001217
428 Ga0207651_10085692
429 Ga0207712_10002554
430 Ga0207668_10012627
431 Ga0207640_10007328
432 Ga0207677_10010070
433 Ga0207703_10016161
434 Ga0207703_10018059
435 Ga0207708_10036977
436 Ga0207702_10031065
437 Ga0207648_10000708
438 Ga0207675_100001101
439 Ga0207675_100004841
440 Ga0209967_1000769
441 Ga0209967_1001023
442 Ga0210000_1000491
443 Ga0207428_10006810
444 Ga0268265_10010257
445 Ga0268264_10094720
446 Ga0265337_1000425
447 Ga0265334_10000790
448 Ga0265338_10012325
449 Ga0307408_100020333
450 Ga0307408_100121339
451 Ga0316579_10013669
452 Ga0316578_10003240
453 Ga0316577_10013985
454 Ga0316583_10005948
455 Ga0316583_10006716
456 Ga0316585_10002801
457 Ga0316580_10001939
458 Ga0373958_0010345
459 Ga0373938_0004101
460 Ga0373928_0010388
461 Ga0373940_0017790
462 Ga0373944_0023494
463 Ga0373951_0000936
464 Ga0373951_0007652
465 Ga0373932_0002201
466 Ga0373939_0006353
467 Ga0373956_0017224
468 Ga0373957_0010649
469 Ga0373962_0004845
470 Ga0316574_0030041
471 Ga0373924_0020341
472 Ga0373931_0000123
473 Ga0373931_0000949
474 Ga0373931_0001520
475 Ga0373931_0011052
476 Ga0373931_0014265
477 Ga0373931_0036988
478 Ga0373935_0013373
479 Ga0373927_0064963
480 Ga0373933_0001013
481 Ga0373947_0046705
482 Ga0373937_0000696
483 Ga0373937_0006865
484 Ga0373937_0013128
485 Ga0316582_0010666
486 Ga0316584_0029347
487 Ga0316584_0079701
488 Ga0373925_0089406
489 Ga0395900_0013933
490 Ga0395898_0006589
491 Ga0436364_1223128
492 Ga0436364_1331333
493 Ga0395901_0001066
494 Ga0400483_134192
495 Ga0439441_000225
496 Ga0439434_0000663
497 Ga0439435_0000131
498 Ga0439460_0002940
499 Ga0451577_0016355
500 Ga0451576_0001013
501 Ga0451576_0156019
502 Ga0466967_0209241
503 Ga0495592_0031573
504 Ga0495603_0007405
505 Ga0495580_0008226
506 Ga0495582_0068382
507 Ga0495582_0069199
508 Ga0495639_0009074
509 Ga0495628_0004277
510 Ga0495630_0010914
511 Ga0495630_0100950
512 Ga0495666_0004404
513 Ga0495652_0060655
514 Ga0495665_0008169
515 Ga0495665_0016915
516 Ga0495586_0003458
517 Ga0495586_0006032
518 Ga0495586_0043798
519 Ga0495598_0002350
520 Ga0495598_0012304
521 Ga0495667_0057441
522 Ga0495634_0011436
523 Ga0495588_0001118
524 Ga0495599_0026712
525 Ga0495647_0000296
526 Ga0495658_0003865
527 Ga0495658_0006613
528 Ga0495669_0004586
529 Ga0495613_0002300
530 Ga0495624_0087215
531 Ga0495600_0012090
532 Ga0495636_0002185
533 Ga0495680_0005343
534 Ga0496102_0065638
535 Ga0496103_0069222
536 Ga0496109_0173456
537 Ga0501038_0008010
538 Ga0501038_0068973
539 Ga0501039_0019102
540 Ga0501040_0002097
541 Ga0501040_0017819
542 Ga0501041_0003333
543 Ga0501041_0049997
544 Ga0501041_0065623
545 Ga0501046_0038713
546 Ga0501048_0016567
547 Ga0501070_0069216
548 Ga0501072_0002206
549 Ga0501072_0002762
550 Ga0501072_0040917
551 Ga0501073_0013479
552 Ga0501074_0042692
553 Ga0501075_0001436
554 Ga0501076_0000152
555 Ga0501076_0049910
556 Ga0501079_0059408
557 Ga0501079_0062398
558 Ga0501080_0020337
559 Ga0501080_0061105
560 Ga0501081_0020724
561 Ga0501081_0024084
562 Ga0501081_0090064
563 Ga0501081_0090683
564 Ga0501044_0008480
565 Ga0501045_0103560
566 nmdc:mga05p37_102185_c1
567 nmdc:mga05p37_122169_c1
568 nmdc:mga05p37_155952_c1
569 nmdc:mga05p37_32839_c1
570 nmdc:mga05p37_453_c1
571 nmdc:mga09592_1204_c1
572 nmdc:mga09592_24371_c1
573 nmdc:mga09592_8273_c1
574 nmdc:mga0qj67_116930_c1
575 nmdc:mga0qj67_2155_c1
576 nmdc:mga0qj67_4601_c1
577 nmdc:mga0qj67_9148_c1
578 nmdc:mga06r32_3123_c1
579 nmdc:mga06r32_48736_c1
580 nmdc:mga08y16_183361_c1
581 nmdc:mga08y16_1936_c1
582 nmdc:mga08y16_29927_c1
583 nmdc:mga08y16_64104_c1
584 nmdc:mga08y16_90231_c1
585 nmdc:mga0n895_12031_c1
586 nmdc:mga0n895_137626_c1
587 nmdc:mga0n895_1551_c1
588 nmdc:mga0n895_16018_c1
589 nmdc:mga0n895_738_c1
590 nmdc:mga0rr50_1345_c1
591 nmdc:mga08x19_17910_c1
592 nmdc:mga08x19_2328_c1
593 nmdc:mga08x19_2944_c1
594 nmdc:mga08x19_33822_c2
595 nmdc:mga0a205_1116_c1
596 nmdc:mga0a205_19197_c1
597 nmdc:mga0a205_24894_c1
598 nmdc:mga0a205_56911_c1
599 Ga0500641_0001210
600 Ga0501084_0022489
601 Ga0501084_0059282
602 Ga0501084_0087317
603 Ga0590071_011205
604 Ga0501082_0010887
605 Ga0501082_0081158
606 Ga0530510_0001389
607 Ga0530510_0027407
608 2883577157

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02776

TPP_enzyme_N

Thiamine pyrophosphate enzyme, N-terminal TPP binding domain

63

195

0.95

PF00205

TPP_enzyme_M

Thiamine pyrophosphate enzyme, central domain

267

396

0.87

PF02775

TPP_enzyme_C

Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

469

611

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
6lpi-assembly4.cif.gz_D crystal structure of ahas holo-enzyme 0.8486 13 567
4rjk-assembly3.cif.gz_H-3 acetolactate synthase from bacillus subtilis bound to lthdp - crystal form ii 0.8441 12 567
6lpi-assembly1.cif.gz_A crystal structure of ahas holo-enzyme 0.8437 13 567
4rjk-assembly1.cif.gz_B acetolactate synthase from bacillus subtilis bound to lthdp - crystal form ii 0.8405 13 567
6lpi-assembly3.cif.gz_C crystal structure of ahas holo-enzyme 0.84 13 569
ID Description Score Start End Superfamily
1y9dB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8739 10 196 3.40.50.970
af_O53554_1_171_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8729 13 191 3.40.50.970
af_P0DP89_1_170_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8689 13 197 3.40.50.970
5dx6A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8592 12 206 3.40.50.970
af_P0DP89_1_170_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8592 13 197 3.40.50.970
ID Description Score Start End GO Terms
AF-A0A2V7D4I3-F1-model_v4 Thiamine pyrophosphate-requiring protein 0.9398 10 564 GO:0000287
GO:0003984
GO:0005948
GO:0009097
GO:0009099
GO:0030976
GO:0050660
AF-A0A7K2BAP0-F1-model_v4 deleted 0.9262 8 563
AF-A0A378FS42-F1-model_v4 Acetolactate synthase catalytic subunit (EC 2.2.1.6) 0.9214 13 519 GO:0000287
GO:0003984
GO:0005948
GO:0009097
GO:0009099
GO:0030976
GO:0050660
AF-A0A0D1Y588-F1-model_v4 Uncharacterized protein 0.92 10 564 GO:0000287
GO:0003984
GO:0004737
GO:0005739
GO:0005948
GO:0009097
GO:0009099
GO:0030976
GO:0050660
AF-A0A4S8YQQ9-F1-model_v4 deleted 0.92 13 565

Map