F397338

General Info

Members Datasets Scaffolds Average Seq Length
303 280 131 461

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2935769743|2935769911
Length 485
Sequence IVLLHRWLGIAFCLLFAMWFATGIVMHFVPFPSLTEAERFAGLAPVDRAEARIAVTDAVTASGIGDATRVRLIQRSDGPVYIVSAPSRAGAVRAADGGDASVTSSDIALAIARDHARSRGLDAARAAIVARAGYDQWSMPNGFDRHRPLFRIALGDAAATEVYVSSLTGEIVLDTTRSERGWNLVGSVLHWIYPTILRSNWWLWDRVVWTLSLLALIAALLGAVLGLTRIKLRGGLIGSPYRGWHALHHLIGLAATVFVLTWIFSGWLSMDHGRLFSRGQLTSAEAGVMNASPNWTAAASLDRQPISLSAREIEWFAVNGNLYRRDRMGLAAQTLIEAGDAPRDRSTGFLDAHELQGLTARLAAGCAVPSVLADSDDYPAQSTVPGAPVYRSRCGDLWFDIDGADGNLLQRLDSSRRAYRWFYGALHTLDFPALMAHPRLRDVLIVGLCMLGLVFSVTGIVIGWRRLRFSLSVRAIGPGRSGRNA

Samples

Sample ID Description Type Environment
1 2507262055 Bradyrhizobium sp. WSM1417 Isolate Nodule
2 2508501009 Bradyrhizobium sp. WSM471 Isolate Nodule
3 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
4 2511231028 Bradyrhizobium sp. YR681 Isolate Rhizosphere
5 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
6 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
7 2513237095 Bradyrhizobium diazoefficiens USDA 122 Isolate Nodule
8 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
9 2513237102 Bradyrhizobium japonicum USDA 135 Isolate Nodule
10 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
11 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
12 2515154112 Bradyrhizobium sp. WSM4349 Isolate Nodule
13 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
14 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
15 2528768022 Bradyrhizobium japonicum USDA 123 Isolate Nodule
16 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
17 2617270741 Bradyrhizobium yuanmingense CCBAU 10071 Isolate Nodule
18 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
19 2791355196 Bradyrhizobium sp. Y36 Isolate Nodule
20 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
21 2816332527 Bradyrhizobium diazoefficiens Y21 Isolate Nodule
22 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
23 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
24 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
25 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
26 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
27 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
28 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
29 2824661429 Bradyrhizobium sp. HAMBI 2115 Isolate Unclassified
30 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
31 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
32 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
33 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
34 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
35 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
36 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
37 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
38 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
39 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
40 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
41 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
42 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
43 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
44 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
45 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
46 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
47 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
48 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
49 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
50 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
51 2849076700 Bradyrhizobium symbiodeficiens 85S1MB Isolate Nodule
52 2857509624 Bradyrhizobium sp. R-73088 Isolate Unclassified
53 2874590934 Bradyrhizobium canariense UBMA181 Isolate Nodule
54 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
55 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
56 2874645413 Bradyrhizobium canariense UBMA122 Isolate Nodule
57 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
58 2876771140 Bradyrhizobium canariense UBMA192 Isolate Nodule
59 2876818435 Bradyrhizobium canariense UBMA195 Isolate Nodule
60 2879074833 Bradyrhizobium canariense UBMA171 Isolate Nodule
61 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
62 2879099564 Bradyrhizobium japonicum UBMA197 Isolate Nodule
63 2879127579 Bradyrhizobium canariense UBMA052 Isolate Nodule
64 2879142872 Bradyrhizobium canariense UBMA061 Isolate Nodule
65 2881364244 Bradyrhizobium sp. RP6 Isolate Unclassified
66 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
67 2885366525 Bradyrhizobium sp. LVM 105 Isolate Unclassified
68 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
69 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
70 2888388044 Bradyrhizobium cosmicum 58S1 Isolate Unclassified
71 2888419890 Bradyrhizobium sp. 1(2017) 63S1MB Isolate Unclassified
72 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
73 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified
74 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
75 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
76 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
77 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
78 2922368715
79 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
80 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
81 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
82 2932784394 Bradyrhizobium sp. S3.2.12 Isolate Nodule
83 2932794094 Bradyrhizobium sp. S3.2.6 Isolate Nodule
84 2932801729 Bradyrhizobium sp. S3.3.6 Isolate Nodule
85 2932809354 Bradyrhizobium sp. S3.5.5 Isolate Nodule
86 2932818245 Bradyrhizobium sp. S3.9.1 Isolate Nodule
87 2932828146 Bradyrhizobium sp. S3.9.2 Isolate Nodule
88 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
89 2935608549 Bradyrhizobium sp. RT6a Isolate Nodule
90 2935616580 Bradyrhizobium sp. RT7a Isolate Nodule
91 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
92 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
93 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
94 2935665750 Bradyrhizobium sp. JR7.2 Isolate Nodule
95 2935675223 Bradyrhizobium sp. LA2.1 Isolate Nodule
96 2935684952 Bradyrhizobium sp. LA3.X Isolate Nodule
97 2935694250 Bradyrhizobium sp. LA6.1 Isolate Nodule
98 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
99 2935713505 Bradyrhizobium sp. LA6.12 Isolate Nodule
100 2935722832 Bradyrhizobium sp. LA6.3 Isolate Nodule
101 2935732158 Bradyrhizobium sp. LA6.4 Isolate Nodule
102 2935741537 Bradyrhizobium sp. LA6.7 Isolate Nodule
103 2935750917 Bradyrhizobium sp. LA6.8 Isolate Nodule
104 2935760218 Bradyrhizobium sp. LA7.1 Isolate Nodule
105 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
106 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
107 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
108 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
109 2935801545 Bradyrhizobium sp. RT10b Isolate Nodule
110 2935810662 Bradyrhizobium sp. RT3a Isolate Nodule
111 2935819856 Bradyrhizobium sp. RT3b Isolate Nodule
112 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
113 2935837841 Bradyrhizobium sp. RT4b Isolate Nodule
114 2935847175 Bradyrhizobium sp. RT5a Isolate Nodule
115 2935855204 Bradyrhizobium sp. RT7b Isolate Nodule
116 2935864058 Bradyrhizobium sp. RT9a Isolate Nodule
117 2935873716 Bradyrhizobium sp. RT9b Isolate Nodule
118 2935883170 Bradyrhizobium sp. S3.12.5 Isolate Nodule
119 2935908558 Bradyrhizobium sp. F1.1.1 Isolate Nodule
120 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
121 2935926038 Bradyrhizobium sp. F1.2.1 Isolate Nodule
122 2935934488 Bradyrhizobium sp. F1.2.2 Isolate Nodule
123 2935942939 Bradyrhizobium sp. F1.2.6 Isolate Nodule
124 2935951376 Bradyrhizobium sp. F1.2.8 Isolate Nodule
125 2935959822 Bradyrhizobium sp. F1.4.3 Isolate Nodule
126 2935967501 Bradyrhizobium sp. F1.6.2 Isolate Nodule
127 2935975950 Bradyrhizobium sp. GM2.2 Isolate Nodule
128 2935984226 Bradyrhizobium sp. i1.15.2 Isolate Nodule
129 2935992306 Bradyrhizobium sp. I1.7.5 Isolate Nodule
130 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
131 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
132 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
133 2936037263 Bradyrhizobium sp. JR18.2 Isolate Nodule
134 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
135 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
136 2940556831 Bradyrhizobium sp. LA8.1 Isolate Nodule
137 2941531003 Bradyrhizobium sp. LB11.1 Isolate Nodule
138 2941538514 Bradyrhizobium sp. RT11b Isolate Nodule
139 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
140 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
141 3005710791 Bradyrhizobium genosp. B BDV5040 Isolate Unclassified
142 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
143 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
144 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
145 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
146 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
147 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
148 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
149 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
150 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
151 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
152 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
153 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
154 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
155 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
156 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
157 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
158 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
159 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
160 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
161 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
162 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
163 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
164 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
165 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
166 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
167 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
168 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
169 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
170 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
171 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
172 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
173 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
174 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
175 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
176 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
177 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
178 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
179 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
180 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
181 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
182 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
183 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
184 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
185 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
186 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
187 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
188 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
189 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
190 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
191 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
192 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
193 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
194 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
195 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
196 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
197 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
198 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
199 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
200 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
201 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
202 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
203 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
204 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
205 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
206 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
207 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
208 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
209 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
210 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
211 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
212 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
213 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
214 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
215 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
216 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
217 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
218 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
219 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
220 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
221 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
222 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
223 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
224 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
225 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
226 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
227 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
228 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
229 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
230 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
231 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
232 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
233 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
234 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
235 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
236 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
237 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
238 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
239 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
240 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
241 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
242 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
243 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
244 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
245 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
246 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
247 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
248 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
249 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
250 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
251 8006926726 Bradyrhizobium guangdongense SM32 Isolate Unclassified
252 8016511872 Bradyrhizobium sp. S3.14.4 Isolate Nodule
253 8016522445 Bradyrhizobium sp. LM6.9 Isolate Nodule
254 8016530956 Bradyrhizobium sp. LM6.11 Isolate Nodule
255 8016539877 Bradyrhizobium sp. LM6.10 Isolate Nodule
256 8016548790 Bradyrhizobium sp. LM3.6 Isolate Nodule
257 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
258 8016566248 Bradyrhizobium sp. LM3.2 Isolate Nodule
259 8016575299 Bradyrhizobium sp. LM2.9 Isolate Nodule
260 8016583857 Bradyrhizobium sp. LM2.7 Isolate Nodule
261 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
262 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
263 8016622563 Bradyrhizobium sp. LB13.1 Isolate Nodule
264 8016630954 Bradyrhizobium sp. F1.13.1 Isolate Nodule
265 8017057580 Bradyrhizobium sp. S3.7.6 Isolate Nodule
266 8019530166 Bradyrhizobium sp. LM4.3 Isolate Nodule
267 8019538911 Bradyrhizobium sp. LB9.1b Isolate Nodule
268 8019547302 Bradyrhizobium sp. LB1.3 Isolate Nodule
269 8019586578 Bradyrhizobium sp. i1.4.4 Isolate Nodule
270 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule
271 8019608314 Bradyrhizobium sp. i1.3.1 Isolate Nodule
272 8019629233 Bradyrhizobium sp. GM6.1 Isolate Nodule
273 8019638758 Bradyrhizobium sp. GM5.1 Isolate Nodule
274 8019648815 Bradyrhizobium sp. GM24.11 Isolate Nodule
275 8019659431 Bradyrhizobium sp. GM22.5 Isolate Nodule
276 8019668869 Bradyrhizobium sp. GM2.4 Isolate Nodule
277 8019678201 Bradyrhizobium sp. GM0.4 Isolate Nodule
278 8019687851 Bradyrhizobium sp. F1.13.4 Isolate Nodule
279 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule
280 8056967851 Bradyrhizobium zhengyangense WYCCWR 12678 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 43.38
Metatranscriptomes 0
Isolates 56.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.2
Nodule 45.21
Rhizoplane 3.3
Rhizosphere 21.12
Stem 0
Stem Tuber 0
Unclassified 17.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10002716 3300003215 Bacteria 10089
2 JGI25153J46596_10002722 3300003215 Bacteria 10077
3 JGI25153J46596_10003246 3300003215 Bacteria 9141
4 JGI25153J46596_10003406 3300003215 Bacteria 8911
5 JGI25160J50197_1000868 3300003354 Bacteria 16038
6 Ga0055531_10005541 3300003794 Bacteria 7368
7 Ga0055543_1001350 3300004625 Bacteria 9943
8 Ga0065165_1000420 3300005262 Bacteria 66966
9 Ga0065165_1000556 3300005262 Bacteria 55512
10 Ga0065165_1004322 3300005262 Bacteria 8933
11 Ga0070668_100042625 3300005347 Bacteria 3479
12 Ga0070671_100029536 3300005355 Bacteria 4520
13 Ga0070663_100045086 3300005455 Bacteria 3114
14 Ga0070678_100146031 3300005456 Bacteria 1899
15 Ga0070665_100012419 3300005548 Bacteria 8586
16 Ga0068855_100143448 3300005563 Bacteria 2720
17 Ga0068852_100039627 3300005616 Bacteria 3968
18 Ga0068852_100053816 3300005616 Bacteria 3466
19 Ga0068858_100203863 3300005842 Bacteria 1871
20 Ga0075365_10005431 3300006038 Bacteria 6869
21 Ga0075365_10035244 3300006038 Bacteria 3236
22 Ga0075368_10011403 3300006042 Bacteria 3233
23 Ga0099824_1005450 3300006942 Bacteria 17919
24 Ga0105240_10219037 3300009093 Bacteria 2219
25 Ga0105241_10018116 3300009174 Bacteria 5178
26 Ga0105248_10025458 3300009177 Bacteria 6580
27 Ga0105237_10001927 3300009545 Bacteria 26484
28 Ga0105237_10017584 3300009545 Bacteria 7410
29 Ga0105238_10088944 3300009551 Bacteria 3075
30 Ga0105239_10359784 3300010375 Bacteria 1643
31 Ga0105239_10395154 3300010375 Bacteria 1564
32 Ga0105246_10071858 3300011119 Bacteria 2438
33 Ga0157374_10188182 3300013296 Bacteria 2019
34 Ga0163163_10023751 3300014325 Bacteria 5824
35 Ga0214544_1000004 3300021320 Bacteria 455869
36 Ga0214542_1000001 3300021321 Bacteria 1018696
37 Ga0214545_1000001 3300021324 Bacteria 1092817
38 Ga0214543_1000006 3300021327 Bacteria 443395
39 Ga0209148_1000566 3300025254 Bacteria 34786
40 Ga0209455_1003433 3300025272 Bacteria 5613
41 Ga0209564_1006648 3300025295 Bacteria 6175
42 Ga0209758_1000024 3300025297 Bacteria 591966
43 Ga0209758_1000068 3300025297 Bacteria 286488
44 Ga0209758_1002413 3300025297 Bacteria 19155
45 Ga0209758_1004016 3300025297 Bacteria 12699
46 Ga0209758_1006051 3300025297 Bacteria 8923
47 Ga0207426_1000120 3300025302 Bacteria 219117
48 Ga0207426_1001073 3300025302 Bacteria 25605
49 Ga0209257_1001327 3300025304 Bacteria 30091
50 Ga0209257_1019301 3300025304 Bacteria 2574
51 Ga0207647_10001023 3300025904 Bacteria 21745
52 Ga0207654_10012521 3300025911 Bacteria 4347
53 Ga0207695_10000008 3300025913 Bacteria 1058268
54 Ga0207671_10003698 3300025914 Bacteria 15079
55 Ga0207639_10176554 3300026041 Bacteria 1814
56 Ga0207678_10009780 3300026067 Bacteria 8432
57 Ga0207698_10066812 3300026142 Bacteria 2832
58 Ga0209389_1000010 3300027296 Bacteria 223892
59 Ga0209389_1000149 3300027296 Bacteria 59631
60 Ga0209589_1000016 3300027357 Bacteria 223788
61 Ga0209489_100016 3300027361 Bacteria 223873
62 Ga0209700_100030 3300027363 Bacteria 212982
63 Ga0209813_10029316 3300027866 Bacteria 1611
64 Ga0307516_10043929 3300031730 Bacteria 4425
65 Ga0307510_10014220 3300033180 Bacteria 9425
66 Ga0395905_0001197 3300037471 Bacteria 32429
67 Ga0395901_0052328 3300038443 Bacteria 4244
68 Ga0466972_0000148 3300044658 Bacteria 57158
69 Ga0466965_0020749 3300044683 Bacteria 3160
70 Ga0466963_0005164 3300044694 Bacteria 7622
71 Ga0466968_0027222 3300044735 Bacteria 2352
72 Ga0466970_0027958 3300044765 Bacteria 2962
73 Ga0466967_0001680 3300045976 Bacteria 13130
74 Ga0495629_0022573 3300046459 Bacteria 4486
75 Ga0495651_0001984 3300046462 Bacteria 15854
76 Ga0495606_0011370 3300046507 Bacteria 7265
77 Ga0495608_0016844 3300046511 Bacteria 5059
78 Ga0495610_0016984 3300046512 Bacteria 4166
79 Ga0495628_0018826 3300046516 Bacteria 5715
80 Ga0495628_0205703 3300046516 Bacteria 1482
81 Ga0495648_0011707 3300046524 Bacteria 6584
82 Ga0495652_0003055 3300046529 Bacteria 16775
83 Ga0495652_0102074 3300046529 Bacteria 2324
84 Ga0495640_0007821 3300046533 Bacteria 8410
85 Ga0495587_0003542 3300046536 Bacteria 10402
86 Ga0495622_0055884 3300046557 Bacteria 1830
87 Ga0495667_0047275 3300046559 Bacteria 2843
88 Ga0495625_0049671 3300046660 Bacteria 3014
89 Ga0495661_0042304 3300046665 Bacteria 2809
90 Ga0495588_0021605 3300046674 Bacteria 3173
91 Ga0495657_0022941 3300046675 Bacteria 4466
92 Ga0495599_0003409 3300046678 Bacteria 9300
93 Ga0495623_0006166 3300046679 Bacteria 7794
94 Ga0495646_0029172 3300046680 Bacteria 3450
95 Ga0495649_0043108 3300046694 Bacteria 2463
96 Ga0495600_0040622 3300046809 Bacteria 3030
97 Ga0495604_0000881 3300047317 Bacteria 24970
98 Ga0495604_0052339 3300047317 Bacteria 3162
99 Ga0495676_0067891 3300047321 Bacteria 2757
100 Ga0495687_016169 3300047443 Bacteria 3761
101 Ga0496100_0094992 3300048903 Bacteria 2043
102 Ga0496102_0074129 3300048905 Bacteria 3128
103 Ga0496104_0116591 3300048907 Bacteria 2563
104 Ga0496108_0062623 3300048911 Bacteria 3132
105 Ga0496109_0062847 3300048912 Bacteria 3396
106 Ga0496112_0034542 3300048915 Bacteria 4921
107 Ga0496113_0044603 3300048916 Bacteria 3285
108 Ga0496113_0062159 3300048916 Bacteria 2820
109 Ga0496114_0062357 3300048917 Bacteria 3120
110 Ga0496115_0156580 3300048918 Bacteria 1882
111 Ga0496116_0025647 3300048919 Bacteria 4329
112 Ga0496119_0077083 3300048922 Bacteria 1932
113 Ga0496121_0044339 3300048924 Bacteria 3837
114 Ga0496121_0053140 3300048924 Bacteria 3396
115 Ga0496121_0248586 3300048924 Bacteria 1235
116 Ga0496125_0016033 3300048928 Bacteria 7215
117 Ga0495682_0020462 3300049460 Bacteria 2484
118 nmdc:mga0yw44_5545_c1 3300050492 Bacteria 5984
119 nmdc:mga0yw44_77963_c1 3300050492 Bacteria 2071
120 Ga0500643_000007 3300053087 Bacteria 462836
121 Ga0500647_0017719 3300053091 Bacteria 3289
122 Ga0500557_000009 3300053105 Bacteria 125806
123 Ga0500595_004214 3300053119 Bacteria 6502
124 Ga0500642_0000081 3300053130 Bacteria 51842
125 Ga0500568_0039559 3300053139 Bacteria 1903
126 Ga0500622_0030281 3300053156 Bacteria 2842
127 Ga0500636_0000228 3300053177 Bacteria 30746
128 Ga0500625_000053 3300053729 Bacteria 23355
129 Ga0500645_009763 3300053730 Bacteria 3211
130 Ga0500609_004024 3300053731 Bacteria 2046
131 Ga0500601_000159 3300053737 Bacteria 14090

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044765 Ga0466970_0027958 Ga0466970_0027958_15_1193 362
2 3300048918 Ga0496115_0156580 Ga0496115_0156580_13_1158 366
3 3300048924 Ga0496121_0248586 Ga0496121_0248586_83_1201 367
4 3300046516 Ga0495628_0205703 Ga0495628_0205703_23_1393 384
5 3300025297 Ga0209758_1004016 Ga0209758_10040162 400
6 iso_pu_bacteria 2824617872 2824620378 401
7 iso_pu_bacteria 2824626560 2824629643 401
8 iso_pu_bacteria 2824635225 2824643074 401
9 iso_pu_bacteria 2824644064 2824651263 401
10 iso_pu_bacteria 2824714736 2824721238 401
11 iso_pu_bacteria 2824723954 2824731259 401
12 3300026041 Ga0207639_10176554 Ga0207639_101765541 402
13 3300005616 Ga0068852_100039627 Ga0068852_1000396272 406
14 3300009174 Ga0105241_10018116 Ga0105241_100181163 406
15 3300009545 Ga0105237_10001927 Ga0105237_1000192721 406
16 3300025911 Ga0207654_10012521 Ga0207654_100125212 406
17 3300025913 Ga0207695_10000008 Ga0207695_10000008479 406
18 3300025914 Ga0207671_10003698 Ga0207671_100036985 406
19 3300026142 Ga0207698_10066812 Ga0207698_100668122 406
20 3300046694 Ga0495649_0043108 Ga0495649_0043108_15_1385 410
21 3300044694 Ga0466963_0005164 Ga0466963_0005164_1449_2891 412
22 3300045976 Ga0466967_0001680 Ga0466967_0001680_2340_3782 412
23 3300010375 Ga0105239_10359784 Ga0105239_103597841 415
24 3300025254 Ga0209148_1000566 Ga0209148_100056612 415
25 3300025272 Ga0209455_1003433 Ga0209455_10034331 415
26 3300053139 Ga0500568_0039559 Ga0500568_0039559_158_1579 415
27 3300005355 Ga0070671_100029536 Ga0070671_1000295363 417
28 3300006042 Ga0075368_10011403 Ga0075368_100114032 417
29 3300025304 Ga0209257_1019301 Ga0209257_10193012 417
30 3300025904 Ga0207647_10001023 Ga0207647_100010233 417
31 3300027866 Ga0209813_10029316 Ga0209813_100293161 417
32 3300005455 Ga0070663_100045086 Ga0070663_1000450861 418
33 3300046512 Ga0495610_0016984 Ga0495610_0016984_2665_4086 418
34 3300047443 Ga0495687_016169 Ga0495687_016169_1766_3187 418
35 3300048905 Ga0496102_0074129 Ga0496102_0074129_154_1575 418
36 3300048924 Ga0496121_0053140 Ga0496121_0053140_1347_2768 418
37 3300005347 Ga0070668_100042625 Ga0070668_1000426252 419
38 3300009177 Ga0105248_10025458 Ga0105248_100254586 419
39 3300013296 Ga0157374_10188182 Ga0157374_101881822 419
40 3300014325 Ga0163163_10023751 Ga0163163_100237515 419
41 3300048907 Ga0496104_0116591 Ga0496104_0116591_814_2235 419
42 3300048911 Ga0496108_0062623 Ga0496108_0062623_430_1851 419
43 3300048912 Ga0496109_0062847 Ga0496109_0062847_560_1981 419
44 3300048915 Ga0496112_0034542 Ga0496112_0034542_440_1861 419
45 3300048916 Ga0496113_0044603 Ga0496113_0044603_302_1723 419
46 3300005563 Ga0068855_100143448 Ga0068855_1001434482 420
47 3300009093 Ga0105240_10219037 Ga0105240_102190372 420
48 3300009545 Ga0105237_10017584 Ga0105237_100175842 420
49 3300046557 Ga0495622_0055884 Ga0495622_0055884_440_1810 420
50 3300048903 Ga0496100_0094992 Ga0496100_0094992_302_1723 420
51 3300053156 Ga0500622_0030281 Ga0500622_0030281_987_2405 420
52 3300011119 Ga0105246_10071858 Ga0105246_100718582 421
53 iso_pu_bacteria 8016557553 8016563072 421
54 3300053731 Ga0500609_004024 Ga0500609_004024_552_1964 423
55 3300004625 Ga0055543_1001350 Ga0055543_10013507 425
56 3300005262 Ga0065165_1000420 Ga0065165_100042038 425
57 3300053087 Ga0500643_000007 Ga0500643_000007_436547_437968 425
58 3300053737 Ga0500601_000159 Ga0500601_000159_1075_2496 426
59 3300049460 Ga0495682_0020462 Ga0495682_0020462_813_2246 431
60 3300050492 nmdc:mga0yw44_77963_c1 nmdc:mga0yw44_77963_c1_347_1774 431
61 3300005548 Ga0070665_100012419 Ga0070665_1000124198 436
62 3300006038 Ga0075365_10035244 Ga0075365_100352442 436
63 3300027363 Ga0209700_100030 Ga0209700_100030167 436
64 3300048928 Ga0496125_0016033 Ga0496125_0016033_4427_5848 436
65 3300053177 Ga0500636_0000228 Ga0500636_0000228_28933_30354 439
66 3300006942 Ga0099824_1005450 Ga0099824_10054503 440
67 3300027296 Ga0209389_1000010 Ga0209389_1000010103 440
68 3300027357 Ga0209589_1000016 Ga0209589_1000016111 440
69 3300027361 Ga0209489_100016 Ga0209489_100016103 440
70 3300009551 Ga0105238_10088944 Ga0105238_100889442 441
71 3300046462 Ga0495651_0001984 Ga0495651_0001984_13998_15428 441
72 3300046511 Ga0495608_0016844 Ga0495608_0016844_3501_4931 441
73 3300046516 Ga0495628_0018826 Ga0495628_0018826_3668_5098 441
74 3300046529 Ga0495652_0003055 Ga0495652_0003055_3294_4724 441
75 3300046533 Ga0495640_0007821 Ga0495640_0007821_714_2144 441
76 3300046536 Ga0495587_0003542 Ga0495587_0003542_1079_2509 441
77 3300046559 Ga0495667_0047275 Ga0495667_0047275_592_2022 441
78 3300046675 Ga0495657_0022941 Ga0495657_0022941_2738_4168 441
79 3300046678 Ga0495599_0003409 Ga0495599_0003409_5751_7181 441
80 3300046679 Ga0495623_0006166 Ga0495623_0006166_4951_6381 441
81 3300046680 Ga0495646_0029172 Ga0495646_0029172_665_2095 441
82 3300046809 Ga0495600_0040622 Ga0495600_0040622_1097_2527 441
83 3300047317 Ga0495604_0000881 Ga0495604_0000881_17165_18595 441
84 3300053729 Ga0500625_000053 Ga0500625_000053_6197_7630 441
85 3300006038 Ga0075365_10005431 Ga0075365_100054314 442
86 3300046507 Ga0495606_0011370 Ga0495606_0011370_1522_2955 442
87 3300046524 Ga0495648_0011707 Ga0495648_0011707_3609_5042 442
88 3300046660 Ga0495625_0049671 Ga0495625_0049671_1483_2916 442
89 3300050492 nmdc:mga0yw44_5545_c1 nmdc:mga0yw44_5545_c1_1323_2744 442
90 iso_pu_bacteria 2876761206 2876764352 442
91 3300021320 Ga0214544_1000004 Ga0214544_1000004196 443
92 3300021321 Ga0214542_1000001 Ga0214542_1000001157 443
93 3300021324 Ga0214545_1000001 Ga0214545_1000001224 443
94 3300021327 Ga0214543_1000006 Ga0214543_1000006221 443
95 3300053730 Ga0500645_009763 Ga0500645_009763_102_1535 443
96 iso_pu_bacteria 2524023205 2524442510 443
97 iso_pu_bacteria 2744054633 2745075588 443
98 3300005262 Ga0065165_1000556 Ga0065165_100055629 444
99 3300025302 Ga0207426_1001073 Ga0207426_10010732 444
100 3300026067 Ga0207678_10009780 Ga0207678_100097804 444
101 3300048917 Ga0496114_0062357 Ga0496114_0062357_826_2247 444
102 3300005456 Ga0070678_100146031 Ga0070678_1001460312 445
103 3300010375 Ga0105239_10395154 Ga0105239_103951541 445
104 3300044658 Ga0466972_0000148 Ga0466972_0000148_26140_27567 445
105 3300044735 Ga0466968_0027222 Ga0466968_0027222_806_2233 445
106 iso_pu_bacteria 2511231028 2511398011 446
107 iso_pu_bacteria 2513237095 2513647177 446
108 iso_pu_bacteria 2517093001 2517103793 446
109 iso_pu_bacteria 2528768022 2528850822 446
110 iso_pu_bacteria 2816332527 2818236215 446
111 iso_pu_bacteria 2824661429 2824666556 446
112 iso_pu_bacteria 2841957949 2841960044 446
113 iso_pu_bacteria 2879099564 2879106069 446
114 iso_pu_bacteria 2881364244 2881368126 446
115 iso_pu_bacteria 2888378607 2888385103 446
116 iso_pu_bacteria 2888388044 2888393124 446
117 iso_pu_bacteria 2922368715 2922372781 446
118 iso_pu_bacteria 2929615660 2929620603 446
119 iso_pu_bacteria 2929624759 2929626497 446
120 iso_pu_bacteria 2932784394 2932784638 446
121 iso_pu_bacteria 2932809354 2932809618 446
122 iso_pu_bacteria 2932818245 2932818639 446
123 iso_pu_bacteria 2932828146 2932828406 446
124 iso_pu_bacteria 2933577622 2933582518 446
125 iso_pu_bacteria 2935616580 2935617379 446
126 iso_pu_bacteria 2935638405 2935639139 446
127 iso_pu_bacteria 2935665750 2935666009 446
128 iso_pu_bacteria 2935675223 2935675657 446
129 iso_pu_bacteria 2935684952 2935685334 446
130 iso_pu_bacteria 2935694250 2935698583 446
131 iso_pu_bacteria 2935703347 2935704146 446
132 iso_pu_bacteria 2935713505 2935713887 446
133 iso_pu_bacteria 2935722832 2935724506 446
134 iso_pu_bacteria 2935732158 2935733136 446
135 iso_pu_bacteria 2935741537 2935742515 446
136 iso_pu_bacteria 2935750917 2935751299 446
137 iso_pu_bacteria 2935760218 2935765930 446
138 iso_pu_bacteria 2935801545 2935802229 446
139 iso_pu_bacteria 2935810662 2935811053 446
140 iso_pu_bacteria 2935827899 2935828634 446
141 iso_pu_bacteria 2935837841 2935840010 446
142 iso_pu_bacteria 2935855204 2935856004 446
143 iso_pu_bacteria 2935864058 2935866052 446
144 iso_pu_bacteria 2935873716 2935877623 446
145 iso_pu_bacteria 2935992306 2935992567 446
146 iso_pu_bacteria 2936037263 2936037528 446
147 iso_pu_bacteria 2940556831 2940557899 446
148 iso_pu_bacteria 2941538514 2941540650 446
149 iso_pu_bacteria 3005718088 3005722842 446
150 iso_pu_bacteria 8016511872 8016521113 446
151 iso_pu_bacteria 8017057580 8017064494 446
152 iso_pu_bacteria 8019586578 8019591670 446
153 iso_pu_bacteria 8019597564 8019599668 446
154 iso_pu_bacteria 8019608314 8019618880 446
155 iso_pu_bacteria 8055742211 8055745465 446
156 3300046459 Ga0495629_0022573 Ga0495629_0022573_1925_3358 447
157 3300047317 Ga0495604_0052339 Ga0495604_0052339_1670_3103 447
158 3300047321 Ga0495676_0067891 Ga0495676_0067891_820_2253 447
159 3300048924 Ga0496121_0044339 Ga0496121_0044339_33_1454 447
160 iso_pu_bacteria 2508501009 2508542100 447
161 iso_pu_bacteria 2508501042 2508692353 447
162 iso_pu_bacteria 2791355196 2793060778 447
163 iso_pu_bacteria 2847939898 2847947403 447
164 iso_pu_bacteria 2849076700 2849078705 447
165 iso_pu_bacteria 2857509624 2857513116 447
166 iso_pu_bacteria 2935648319 2935652338 447
167 iso_pu_bacteria 2935656913 2935660920 447
168 iso_pu_bacteria 2935984226 2935986809 447
169 iso_pu_bacteria 2936011229 2936014976 447
170 iso_pu_bacteria 2936019824 2936022043 447
171 iso_pu_bacteria 2936028420 2936032731 447
172 iso_pu_bacteria 2936046547 2936050717 447
173 iso_pu_bacteria 2936055302 2936059506 447
174 iso_pu_bacteria 8006926726 8006929792 447
175 iso_pu_bacteria 8016630954 8016639525 447
176 3300005842 Ga0068858_100203863 Ga0068858_1002038632 448
177 3300046674 Ga0495588_0021605 Ga0495588_0021605_200_1621 448
178 3300048916 Ga0496113_0062159 Ga0496113_0062159_1012_2433 448
179 3300048919 Ga0496116_0025647 Ga0496116_0025647_1194_2615 448
180 3300053091 Ga0500647_0017719 Ga0500647_0017719_733_2166 448
181 3300053105 Ga0500557_000009 Ga0500557_000009_90793_92226 448
182 iso_pu_bacteria 2513237139 2513877620 448
183 iso_pu_bacteria 2617270735 2617346463 448
184 iso_pu_bacteria 2802429603 2805918370 448
185 iso_pu_bacteria 2824696289 2824697746 448
186 iso_pu_bacteria 2824704595 2824711647 448
187 iso_pu_bacteria 2824753945 2824762891 448
188 iso_pu_bacteria 2824763712 2824772872 448
189 iso_pu_bacteria 2841949485 2841955992 448
190 iso_pu_bacteria 2847930680 2847937003 448
191 iso_pu_bacteria 2904711408 2904712332 448
192 iso_pu_bacteria 8019648815 8019649008 448
193 iso_pu_bacteria 2513237101 2513696580 449
194 iso_pu_bacteria 2513237102 2513700766 449
195 iso_pu_bacteria 2824671348 2824679254 449
196 iso_pu_bacteria 2824679649 2824687468 449
197 iso_pu_bacteria 2879083081 2879083864 449
198 iso_pu_bacteria 2881665667 2881667789 449
199 iso_pu_bacteria 2906643746 2906649884 449
200 iso_pu_bacteria 2922393267 2922397425 449
201 iso_pu_bacteria 3005483717 3005485086 449
202 iso_pu_bacteria 3005710791 3005715506 449
203 3300003215 JGI25153J46596_10002722 JGI25153J46596_100027224 450
204 3300003215 JGI25153J46596_10003246 JGI25153J46596_100032467 450
205 3300025297 Ga0209758_1002413 Ga0209758_100241313 450
206 3300048922 Ga0496119_0077083 Ga0496119_0077083_455_1876 450
207 iso_pu_bacteria 2507262055 2507507993 450
208 iso_pu_bacteria 2513237092 2513622586 450
209 iso_pu_bacteria 2513237094 2513639418 450
210 iso_pu_bacteria 2513237161 2514009765 450
211 iso_pu_bacteria 2515154112 2515626880 450
212 iso_pu_bacteria 2617270741 2617378568 450
213 iso_pu_bacteria 2824600985 2824605334 450
214 iso_pu_bacteria 2824609381 2824615584 450
215 iso_pu_bacteria 2824653114 2824656712 450
216 iso_pu_bacteria 2824687955 2824695830 450
217 iso_pu_bacteria 2824732956 2824740366 450
218 iso_pu_bacteria 2824746037 2824748522 450
219 iso_pu_bacteria 2838122688 2838122999 450
220 iso_pu_bacteria 2841941048 2841944716 450
221 iso_pu_bacteria 2841966195 2841969871 450
222 iso_pu_bacteria 2841974524 2841978699 450
223 iso_pu_bacteria 2841983080 2841984175 450
224 iso_pu_bacteria 2874590934 2874599088 450
225 iso_pu_bacteria 2874612657 2874617263 450
226 iso_pu_bacteria 2874620515 2874626603 450
227 iso_pu_bacteria 2874645413 2874650467 450
228 iso_pu_bacteria 2876771140 2876779127 450
229 iso_pu_bacteria 2876818435 2876822731 450
230 iso_pu_bacteria 2879074833 2879082920 450
231 iso_pu_bacteria 2879127579 2879133015 450
232 iso_pu_bacteria 2879142872 2879149302 450
233 iso_pu_bacteria 2885366525 2885369570 450
234 iso_pu_bacteria 2885409591 2885412942 450
235 iso_pu_bacteria 2888419890 2888425250 450
236 iso_pu_bacteria 2904666416 2904671944 450
237 iso_pu_bacteria 2908775508 2908780810 450
238 iso_pu_bacteria 2932794094 2932795458 450
239 iso_pu_bacteria 2932801729 2932807947 450
240 iso_pu_bacteria 2935608549 2935609511 450
241 iso_pu_bacteria 2935769743 2935769911 450
242 iso_pu_bacteria 2935777560 2935782069 450
243 iso_pu_bacteria 2935785616 2935785847 450
244 iso_pu_bacteria 2935793552 2935794225 450
245 iso_pu_bacteria 2935819856 2935822673 450
246 iso_pu_bacteria 2935847175 2935848255 450
247 iso_pu_bacteria 2935883170 2935883641 450
248 iso_pu_bacteria 2935908558 2935909942 450
249 iso_pu_bacteria 2935916978 2935917668 450
250 iso_pu_bacteria 2935926038 2935927422 450
251 iso_pu_bacteria 2935934488 2935936733 450
252 iso_pu_bacteria 2935942939 2935944964 450
253 iso_pu_bacteria 2935951376 2935953401 450
254 iso_pu_bacteria 2935959822 2935961107 450
255 iso_pu_bacteria 2935967501 2935970241 450
256 iso_pu_bacteria 2935975950 2935981062 450
257 iso_pu_bacteria 2941531003 2941536742 450
258 iso_pu_bacteria 3005587118 3005587383 450
259 iso_pu_bacteria 8016522445 8016529010 450
260 iso_pu_bacteria 8016530956 8016534212 450
261 iso_pu_bacteria 8016539877 8016547439 450
262 iso_pu_bacteria 8016548790 8016554701 450
263 iso_pu_bacteria 8016566248 8016572555 450
264 iso_pu_bacteria 8016575299 8016576721 450
265 iso_pu_bacteria 8016583857 8016593772 450
266 iso_pu_bacteria 8016595262 8016600830 450
267 iso_pu_bacteria 8016613128 8016615264 450
268 iso_pu_bacteria 8016622563 8016625944 450
269 iso_pu_bacteria 8019530166 8019533983 450
270 iso_pu_bacteria 8019538911 8019545689 450
271 iso_pu_bacteria 8019547302 8019553024 450
272 iso_pu_bacteria 8019629233 8019633653 450
273 iso_pu_bacteria 8019638758 8019646254 450
274 iso_pu_bacteria 8019659431 8019661529 450
275 iso_pu_bacteria 8019668869 8019671061 450
276 iso_pu_bacteria 8019678201 8019685127 450
277 iso_pu_bacteria 8019687851 8019690719 450
278 iso_pu_bacteria 8056967851 8056968699 450
279 3300031730 Ga0307516_10043929 Ga0307516_100439294 451
280 3300044683 Ga0466965_0020749 Ga0466965_0020749_617_2035 451
281 3300003354 JGI25160J50197_1000868 JGI25160J50197_10008683 452
282 3300025302 Ga0207426_1000120 Ga0207426_100012056 452
283 3300046665 Ga0495661_0042304 Ga0495661_0042304_163_1584 452
284 3300027296 Ga0209389_1000149 Ga0209389_100014923 453
285 3300053130 Ga0500642_0000081 Ga0500642_0000081_4402_5832 453
286 3300003215 JGI25153J46596_10002716 JGI25153J46596_100027167 454
287 3300003215 JGI25153J46596_10003406 JGI25153J46596_100034064 454
288 3300003794 Ga0055531_10005541 Ga0055531_100055412 454
289 3300005262 Ga0065165_1004322 Ga0065165_10043223 454
290 3300005616 Ga0068852_100053816 Ga0068852_1000538162 454
291 3300025295 Ga0209564_1006648 Ga0209564_10066484 454
292 3300025297 Ga0209758_1000024 Ga0209758_1000024524 454
293 3300025297 Ga0209758_1000068 Ga0209758_1000068296 454
294 3300025297 Ga0209758_1006051 Ga0209758_10060515 454
295 3300025304 Ga0209257_1001327 Ga0209257_10013275 454
296 3300033180 Ga0307510_10014220 Ga0307510_100142202 454
297 3300037471 Ga0395905_0001197 Ga0395905_0001197_22237_23661 454
298 3300038443 Ga0395901_0052328 Ga0395901_0052328_521_1945 454
299 3300046529 Ga0495652_0102074 Ga0495652_0102074_262_1695 454
300 3300053119 Ga0500595_004214 Ga0500595_004214_902_2335 454
301 iso_pu_bacteria 2844315083 2844319684 454
302 iso_pu_bacteria 2903727486 2903730635 454
303 iso_pu_bacteria 2906602504 2906609557 454

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03929

PepSY_TM

PepSY-associated TM region

2

466

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
6w1s-assembly1.cif.gz_Y atomic model of the mammalian mediator complex 0.8165 191 257
7rro-assembly1.cif.gz_F4 structure of the 48-nm repeat doublet microtubule from bovine tracheal cilia 0.7844 191 257
4ux5-assembly1.cif.gz_B structure of dna complex of pcg2 0.6065 298 342
6xtj-assembly1.cif.gz_AAA the high resolution structure of the ferm domain of human fermt2 0.5695 336 398
8dfs-assembly1.cif.gz_M type i-c cascade bound to acrif2 0.5613 296 342
ID Description Score Start End Superfamily
af_Q6AZB9_1_109_1.20.5.110 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.721 191 257 1.20.5.110
af_Q1L9G6_1_110_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.676 191 260 1.10.287.70
af_A0A0N4SUK7_237_541_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.6663 296 330 2.130.10.10
af_E9QFM9_209_374_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.653 296 329 2.130.10.10
af_Q9SXA0_221_341_2.60.120.200 Mainly Beta;Sandwich;Jelly Rolls; 0.6449 290 330 2.60.120.200
ID Description Score Start End GO Terms
AF-A0A560KBU6-F1-model_v4 PepSY-associated transmembrane protein 0.8176 257 451 GO:0016020
AF-A0A560KBU6-F1-model_v4 PepSY-associated transmembrane protein 0.7951 257 451 GO:0016020
AF-A0A431R1P9-F1-model_v4 deleted 0.7551 134 452
AF-A0A520JNK3-F1-model_v4 PepSY domain-containing protein 0.7294 224 451 GO:0016020
AF-A0A431R1P9-F1-model_v4 deleted 0.7265 134 452

Feature Viewer

pLDDT pTM Quality
66.04 0.5 Medium
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Predicted Structure (AlphaFold2)

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