F397279

General Info

Members Datasets Scaffolds Average Seq Length
303 159 606 376

Family's Representative Sequence

Representative Sequence 3300049586|Ga0501070_0029836|Ga0501070_0029836_3319_4548
Length 409
Sequence MLAADAAPGARDDRNLAAQIRHAAEHMDFELSDEQQLIRQTAREFCDREVAPQAREWDRTERMDPGIVEQLANVGFLGCALPEEYGGMGLDTVSYCLVMEELGRADSSVRGIVSVNNGLAGKTIARWGTPEQKAEWLPRMCDGSALGCYGLTEPGSGSDPASLATRAERDGDDWMLHGSKLFITLGSWAGVCLVFARTGGDGPRGITCFLVPTASEGFSAVKIDGKLGLRAQDTAELFLDAVRVPDTARLGGEGEGFKVAMSALDNGRISLAAGSVGIAQGCVDACVAYAAERRQFGKPIAAFQLVQELIADTAVETEAARMLAWRAAFLADKGKPYTLAASQAKYYASEVAVRAANAAVQVHGGYGYVDEYPVQKYLRDARVSTLYEGTSQIQKLLIGRALTGESAFL

Samples

Sample ID Description Type Environment
1 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
22 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
23 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
37 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
38 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
39 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
54 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
55 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
56 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
57 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
58 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
59 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
60 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
61 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
62 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
63 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
64 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
65 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
66 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
67 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
68 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
69 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
70 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
71 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
72 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
78 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
79 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
80 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
81 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
82 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
83 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
84 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
85 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
86 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
87 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
88 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
89 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
90 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
91 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
92 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
93 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
94 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
95 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
96 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
97 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
98 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
99 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
100 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
101 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
102 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
103 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
104 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
105 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
106 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
107 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
108 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
109 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
110 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
111 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
112 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
113 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
114 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
115 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
116 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
117 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
118 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
119 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
129 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
130 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
131 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
132 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
133 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
134 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
135 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
136 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
137 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
138 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
141 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
144 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
147 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
148 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
149 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
150 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
151 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
152 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
153 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
155 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
156 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
157 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
158 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
159 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 98.68
Metatranscriptomes 0.33
Isolates 0.99

Biome Distribution

Category Percentage (%)
Aerial Root 0.99
Bulb 0
Endosphere 1.32
Nodule 0
Rhizoplane 6.6
Rhizosphere 89.77
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501070_0029836 3300049586 Bacteria 4569
2 JGI25407J50210_10001152 3300003373 Bacteria 5846
3 Ga0070658_10091107 3300005327 Bacteria 2513
4 Ga0070683_100055374 3300005329 Bacteria 3680
5 Ga0070680_100000001 3300005336 Bacteria 276263
6 Ga0070714_100002915 3300005435 Bacteria 12652
7 Ga0070714_100197291 3300005435 Bacteria 1840
8 Ga0070708_100002154 3300005445 Bacteria 15197
9 Ga0070708_100010335 3300005445 Bacteria 7559
10 Ga0070708_100042561 3300005445 Bacteria 3988
11 Ga0070708_100043507 3300005445 Bacteria 3946
12 Ga0070681_10017373 3300005458 Bacteria 7189
13 Ga0070681_10032427 3300005458 Bacteria 5243
14 Ga0070706_100000386 3300005467 Bacteria 52878
15 Ga0070706_100047048 3300005467 Bacteria 3981
16 Ga0070706_100085982 3300005467 Bacteria 2914
17 Ga0070707_100005262 3300005468 Bacteria 12112
18 Ga0070707_100030393 3300005468 Bacteria 5143
19 Ga0070707_100043677 3300005468 Bacteria 4289
20 Ga0070707_100120584 3300005468 Bacteria 2546
21 Ga0070698_100000387 3300005471 Bacteria 46238
22 Ga0070698_100001821 3300005471 Bacteria 23719
23 Ga0070698_100033331 3300005471 Bacteria 5335
24 Ga0070698_100081636 3300005471 Bacteria 3227
25 Ga0070698_100099592 3300005471 Bacteria 2880
26 Ga0070699_100006111 3300005518 Bacteria 10536
27 Ga0070699_100016226 3300005518 Bacteria 6393
28 Ga0070699_100030907 3300005518 Bacteria 4623
29 Ga0070684_100103498 3300005535 Bacteria 2547
30 Ga0070684_100109057 3300005535 Bacteria 2481
31 Ga0070697_100004974 3300005536 Bacteria 10206
32 Ga0070696_100018556 3300005546 Bacteria 4703
33 Ga0068857_100241575 3300005577 Bacteria 1654
34 Ga0081455_10006453 3300005937 Bacteria 12566
35 Ga0081455_10065783 3300005937 Bacteria 3030
36 Ga0081455_10069629 3300005937 Bacteria 2924
37 Ga0081455_10083043 3300005937 Bacteria 2618
38 Ga0081455_10138753 3300005937 Bacteria 1891
39 Ga0081538_10000195 3300005981 Bacteria 66942
40 Ga0081538_10000529 3300005981 Bacteria 42265
41 Ga0081538_10013293 3300005981 Bacteria 6526
42 Ga0081538_10035900 3300005981 Bacteria 3247
43 Ga0081539_10001899 3300005985 Bacteria 32393
44 Ga0081539_10004244 3300005985 Bacteria 16099
45 Ga0070717_10079908 3300006028 Bacteria 2743
46 Ga0075365_10117042 3300006038 Bacteria 1835
47 Ga0075364_10087377 3300006051 Bacteria 2066
48 Ga0075362_10063138 3300006177 Bacteria 1679
49 Ga0075428_100584281 3300006844 Bacteria 1193
50 Ga0075430_100010556 3300006846 Bacteria 7819
51 Ga0075431_100014009 3300006847 Bacteria 8100
52 Ga0075431_100504017 3300006847 Bacteria 1201
53 Ga0075433_10005478 3300006852 Bacteria 9971
54 Ga0075433_10034329 3300006852 Bacteria 4356
55 Ga0075433_10072273 3300006852 Bacteria 3033
56 Ga0075434_100002433 3300006871 Bacteria 16366
57 Ga0075434_100016494 3300006871 Bacteria 7101
58 Ga0075434_100207055 3300006871 Bacteria 1982
59 Ga0075429_100009573 3300006880 Bacteria 8404
60 Ga0075436_100042915 3300006914 Bacteria 3118
61 Ga0075435_100002214 3300007076 Bacteria 12830
62 Ga0099794_10000038 3300007265 Bacteria 51815
63 Ga0111539_10021896 3300009094 Bacteria 7858
64 Ga0111539_10034677 3300009094 Bacteria 6115
65 Ga0111539_10102275 3300009094 Bacteria 3363
66 Ga0111539_10139793 3300009094 Bacteria 2835
67 Ga0114129_10003823 3300009147 Bacteria 21225
68 Ga0114129_10063193 3300009147 Bacteria 5171
69 Ga0114129_10118247 3300009147 Bacteria 3651
70 Ga0114129_10118448 3300009147 Bacteria 3647
71 Ga0157370_10006232 3300013104 Bacteria 13213
72 Ga0182008_10001966 3300014497 Bacteria 13201
73 Ga0157376_10091820 3300014969 Bacteria 2631
74 Ga0163161_10094424 3300017792 Bacteria 2217
75 Ga0224712_10000960 3300022467 Bacteria 6249
76 Ga0207684_10000062 3300025910 Bacteria 202863
77 Ga0207684_10009169 3300025910 Bacteria 8755
78 Ga0207707_10027707 3300025912 Bacteria 4955
79 Ga0207693_10066446 3300025915 Bacteria 2823
80 Ga0207660_10000001 3300025917 Bacteria 1034169
81 Ga0207662_10038745 3300025918 Bacteria 2793
82 Ga0207657_10080565 3300025919 Bacteria 2736
83 Ga0207646_10049325 3300025922 Bacteria 3771
84 Ga0207646_10072708 3300025922 Bacteria 3071
85 Ga0207646_10111847 3300025922 Bacteria 2451
86 Ga0207664_10144228 3300025929 Bacteria 2018
87 Ga0207661_10030211 3300025944 Bacteria 4171
88 Ga0207661_10197867 3300025944 Bacteria 1765
89 Ga0207667_10217180 3300025949 Bacteria 1959
90 Ga0207702_10053591 3300026078 Bacteria 3415
91 Ga0207674_10077181 3300026116 Bacteria 3337
92 Ga0209588_1000010 3300027671 Bacteria 159025
93 Ga0207428_10019304 3300027907 Bacteria 5813
94 Ga0207428_10176942 3300027907 Bacteria 1613
95 Ga0265319_1000367 3300028563 Bacteria 32543
96 Ga0265334_10025858 3300028573 Bacteria 2374
97 Ga0265318_10001025 3300028577 Bacteria 17763
98 Ga0265338_10005122 3300028800 Bacteria 17268
99 Ga0265338_10007410 3300028800 Bacteria 13628
100 Ga0265330_10018211 3300031235 Bacteria 3228
101 Ga0265320_10003780 3300031240 Bacteria 10062
102 Ga0265327_10006888 3300031251 Bacteria 8940
103 Ga0265327_10016310 3300031251 Bacteria 4724
104 Ga0265316_10007267 3300031344 Bacteria 10451
105 Ga0316575_10010820 3300031665 Bacteria 3364
106 Ga0265314_10004327 3300031711 Bacteria 13245
107 Ga0265342_10004057 3300031712 Bacteria 11681
108 Ga0307405_10126080 3300031731 Bacteria 1761
109 Ga0307409_100035894 3300031995 Bacteria 3637
110 Ga0307416_100343854 3300032002 Bacteria 1506
111 Ga0307416_100353027 3300032002 Bacteria 1489
112 Ga0307415_100009535 3300032126 Bacteria 5449
113 Ga0307415_100030342 3300032126 Bacteria 3469
114 Ga0373956_0070920 3300035119 Bacteria 1590
115 Ga0373931_0043705 3300035691 Bacteria 2361
116 Ga0373925_0000319 3300037068 Bacteria 50232
117 Ga0373925_0122350 3300037068 Bacteria 2021
118 Ga0395899_0010878 3300037312 Bacteria 6973
119 Ga0395899_0013578 3300037312 Bacteria 6227
120 Ga0395899_0017078 3300037312 Bacteria 5528
121 Ga0395899_0092146 3300037312 Bacteria 2195
122 Ga0395899_0116668 3300037312 Bacteria 1915
123 Ga0395899_0155302 3300037312 Bacteria 1619
124 Ga0395900_0001815 3300037418 Bacteria 24440
125 Ga0395900_0003246 3300037418 Bacteria 17599
126 Ga0395900_0010224 3300037418 Bacteria 9596
127 Ga0395900_0013924 3300037418 Bacteria 8209
128 Ga0395900_0015255 3300037418 Bacteria 7835
129 Ga0395900_0018081 3300037418 Bacteria 7195
130 Ga0395900_0035166 3300037418 Bacteria 5160
131 Ga0395900_0058566 3300037418 Bacteria 3966
132 Ga0395900_0098552 3300037418 Bacteria 3003
133 Ga0395900_0141134 3300037418 Bacteria 2467
134 Ga0395900_0169750 3300037418 Bacteria 2221
135 Ga0395900_0225706 3300037418 Bacteria 1886
136 Ga0395900_0240401 3300037418 Bacteria 1817
137 Ga0395898_0006446 3300037466 Bacteria 12539
138 Ga0395898_0010774 3300037466 Bacteria 9549
139 Ga0395898_0094780 3300037466 Bacteria 2868
140 Ga0395898_0123972 3300037466 Bacteria 2475
141 Ga0395898_0149866 3300037466 Bacteria 2232
142 Ga0395898_0274144 3300037466 Bacteria 1609
143 Ga0395898_0284297 3300037466 Bacteria 1578
144 Ga0395898_0408236 3300037466 Bacteria 1295
145 Ga0395905_0005093 3300037471 Bacteria 13515
146 Ga0395905_0010409 3300037471 Bacteria 9053
147 Ga0395905_0016789 3300037471 Bacteria 6955
148 Ga0395905_0018720 3300037471 Bacteria 6570
149 Ga0395905_0029405 3300037471 Bacteria 5176
150 Ga0395905_0044489 3300037471 Bacteria 4167
151 Ga0395905_0078379 3300037471 Bacteria 3096
152 Ga0395905_0176499 3300037471 Bacteria 2006
153 Ga0395905_0229200 3300037471 Bacteria 1737
154 Ga0395905_0279550 3300037471 Bacteria 1555
155 Ga0395901_0007832 3300038443 Bacteria 10781
156 Ga0395901_0014179 3300038443 Bacteria 8114
157 Ga0395901_0014626 3300038443 Bacteria 7974
158 Ga0395901_0023425 3300038443 Bacteria 6330
159 Ga0395901_0025799 3300038443 Bacteria 6033
160 Ga0395901_0052204 3300038443 Bacteria 4249
161 Ga0395901_0117887 3300038443 Bacteria 2789
162 Ga0395901_0188707 3300038443 Bacteria 2162
163 Ga0395901_0335390 3300038443 Bacteria 1563
164 Ga0400485_06691 3300038735 Bacteria 31473
165 Ga0400486_00666 3300038742 Bacteria 32635
166 Ga0451793_0099621 3300041452 Bacteria 1529
167 Ga0451800_1163797 3300041459 Bacteria 6321
168 Ga0451804_0287572 3300041463 Bacteria 3791
169 Ga0451845_0100244 3300041501 Bacteria 3651
170 Ga0451855_0106601 3300041511 Bacteria 1819
171 Ga0439463_005071 3300042016 Bacteria 3278
172 Ga0451577_0089182 3300042876 Bacteria 2752
173 Ga0466963_0008273 3300044694 Bacteria 6233
174 Ga0466963_0008474 3300044694 Bacteria 6162
175 Ga0466963_0037005 3300044694 Bacteria 3185
176 Ga0466963_0178624 3300044694 Bacteria 1481
177 Ga0466964_0039227 3300044706 Bacteria 1907
178 Ga0466957_0163915 3300044842 Bacteria 1445
179 Ga0466958_0000749 3300045836 Bacteria 14247
180 Ga0466958_0019637 3300045836 Bacteria 3933
181 Ga0466958_0021632 3300045836 Bacteria 3761
182 Ga0466958_0180331 3300045836 Bacteria 1340
183 Ga0466967_0056000 3300045976 Bacteria 3475
184 Ga0466967_0097700 3300045976 Bacteria 2680
185 Ga0466967_0224977 3300045976 Bacteria 1784
186 Ga0495651_0107293 3300046462 Bacteria 2069
187 Ga0495653_0028828 3300046463 Bacteria 4438
188 Ga0495653_0196846 3300046463 Bacteria 1371
189 Ga0495582_0155355 3300046473 Bacteria 1300
190 Ga0495584_0022488 3300046491 Bacteria 3199
191 Ga0495585_0010526 3300046492 Bacteria 5502
192 Ga0495630_0008120 3300046517 Bacteria 7543
193 Ga0495630_0030135 3300046517 Bacteria 4035
194 Ga0495630_0227298 3300046517 Bacteria 1425
195 Ga0495642_0023751 3300046528 Bacteria 2422
196 Ga0495652_0000003 3300046529 Bacteria 597094
197 Ga0495665_0024602 3300046531 Bacteria 3234
198 Ga0495640_0137664 3300046533 Bacteria 1576
199 Ga0495609_0079911 3300046538 Bacteria 1430
200 Ga0495667_0039591 3300046559 Bacteria 3134
201 Ga0495611_0180941 3300046648 Bacteria 985
202 Ga0495659_0017543 3300046664 Bacteria 2374
203 Ga0495588_0154945 3300046674 Bacteria 1211
204 Ga0495657_0035697 3300046675 Bacteria 3443
205 Ga0495647_0019940 3300046681 Bacteria 2403
206 Ga0495589_0022234 3300046794 Bacteria 3237
207 Ga0495589_0065425 3300046794 Bacteria 1782
208 Ga0495600_0033147 3300046809 Bacteria 3353
209 Ga0495600_0088675 3300046809 Bacteria 2018
210 Ga0495680_0026707 3300047322 Bacteria 4754
211 Ga0495677_0013542 3300047445 Bacteria 2969
212 Ga0495593_0044173 3300047673 Bacteria 2385
213 Ga0496102_0003890 3300048905 Bacteria 12652
214 Ga0496102_0232541 3300048905 Bacteria 1738
215 Ga0496103_0031356 3300048906 Bacteria 3238
216 Ga0496103_0142957 3300048906 Bacteria 1531
217 Ga0496107_0067753 3300048910 Bacteria 2590
218 Ga0496108_0073069 3300048911 Bacteria 2896
219 Ga0496109_0002918 3300048912 Bacteria 14290
220 Ga0496109_0204280 3300048912 Bacteria 1857
221 Ga0496110_0002408 3300048913 Bacteria 14006
222 Ga0496110_0069165 3300048913 Bacteria 3126
223 Ga0496110_0201838 3300048913 Bacteria 1807
224 Ga0496111_0006303 3300048914 Bacteria 7693
225 Ga0496111_0026368 3300048914 Bacteria 4103
226 Ga0496111_0096322 3300048914 Bacteria 2172
227 Ga0496112_0006334 3300048915 Bacteria 10390
228 Ga0496112_0066475 3300048915 Bacteria 3557
229 Ga0496112_0209254 3300048915 Bacteria 1908
230 Ga0501034_0015736 3300049571 Bacteria 7767
231 Ga0501036_0002243 3300049572 Bacteria 15099
232 Ga0501036_0043669 3300049572 Bacteria 3796
233 Ga0501036_0094412 3300049572 Bacteria 2528
234 Ga0501038_0012717 3300049574 Bacteria 7689
235 Ga0501039_0004697 3300049575 Bacteria 10341
236 Ga0501040_0005496 3300049576 Bacteria 8203
237 Ga0501043_0027979 3300049579 Bacteria 4424
238 Ga0501047_0002553 3300049581 Bacteria 17354
239 Ga0501067_0002731 3300049583 Bacteria 9703
240 Ga0501067_0030467 3300049583 Bacteria 2992
241 Ga0501068_0032844 3300049584 Bacteria 3087
242 Ga0501069_0002250 3300049585 Bacteria 9734
243 Ga0501069_0024347 3300049585 Bacteria 3301
244 Ga0501070_0009486 3300049586 Bacteria 8228
245 Ga0501070_0021567 3300049586 Bacteria 5404
246 Ga0501071_0004025 3300049587 Bacteria 9281
247 Ga0501072_0000002 3300049588 Bacteria 319523
248 Ga0501072_0005633 3300049588 Bacteria 9532
249 Ga0501072_0007637 3300049588 Bacteria 8207
250 Ga0501072_0065962 3300049588 Bacteria 2855
251 Ga0501073_0007466 3300049589 Bacteria 8128
252 Ga0501073_0038452 3300049589 Bacteria 3394
253 Ga0501074_0041708 3300049590 Bacteria 3322
254 Ga0501074_0045996 3300049590 Bacteria 3156
255 Ga0501075_0001858 3300049591 Bacteria 13945
256 Ga0501075_0004445 3300049591 Bacteria 9489
257 Ga0501076_0002178 3300049592 Bacteria 13440
258 Ga0501076_0018156 3300049592 Bacteria 5357
259 Ga0501077_0004311 3300049593 Bacteria 8612
260 Ga0501077_0066944 3300049593 Bacteria 2278
261 Ga0501079_0005634 3300049741 Bacteria 9348
262 Ga0501079_0008747 3300049741 Bacteria 7674
263 Ga0501079_0076833 3300049741 Bacteria 2582
264 Ga0501080_0078407 3300049742 Bacteria 3072
265 Ga0501080_0101903 3300049742 Bacteria 2663
266 Ga0501080_0214678 3300049742 Bacteria 1762
267 Ga0501081_0001123 3300049743 Bacteria 16107
268 Ga0501083_0000684 3300049744 Bacteria 22083
269 Ga0501083_0006553 3300049744 Bacteria 8261
270 Ga0501044_0011163 3300049823 Bacteria 9743
271 nmdc:mga05p37_15961_c1 3300050507 Bacteria 9034
272 nmdc:mga05p37_23763_c2 3300050507 Bacteria 6872
273 nmdc:mga05p37_34028_c1 3300050507 Bacteria 6241
274 nmdc:mga09592_26388_c1 3300050508 Bacteria 4812
275 nmdc:mga09592_50199_c1 3300050508 Bacteria 3519
276 nmdc:mga06r32_21498_c1 3300050510 Bacteria 5956
277 nmdc:mga06r32_445806_c1 3300050510 Bacteria 1274
278 nmdc:mga06r32_81234_c1 3300050510 Bacteria 3157
279 nmdc:mga0n895_269009_c1 3300050512 Bacteria 1729
280 nmdc:mga0n895_4658_c1 3300050512 Bacteria 11312
281 nmdc:mga0n895_86024_c1 3300050512 Bacteria 3140
282 nmdc:mga0rr50_145149_c1 3300050513 Bacteria 1912
283 nmdc:mga0rr50_49126_c1 3300050513 Bacteria 3122
284 nmdc:mga0rr50_8505_c1 3300050513 Bacteria 6394
285 nmdc:mga08x19_5897_c1 3300050514 Bacteria 7247
286 nmdc:mga0a205_184512_c1 3300050515 Bacteria 1980
287 nmdc:mga0a205_211333_c1 3300050515 Bacteria 1828
288 nmdc:mga0a205_29864_c1 3300050515 Bacteria 5217
289 Ga0495619_0024700 3300053085 Bacteria 3856
290 Ga0495619_0068892 3300053085 Bacteria 2364
291 Ga0500616_0006411 3300053153 Bacteria 7712
292 Ga0501084_0000054 3300054114 Bacteria 90236
293 Ga0590075_009519 3300059424 Bacteria 2329
294 Ga0501082_0000035 3300060353 Bacteria 96746
295 Ga0501082_0145314 3300060353 Bacteria 2059
296 Ga0466962_0159270 3300061719 Bacteria 1097
297 Ga0530510_0002280 3300061734 Bacteria 13150
298 Ga0530510_0076181 3300061734 Bacteria 2437
299 Ga0530510_0078756 3300061734 Bacteria 2397
300 Ga0530510_0126774 3300061734 Bacteria 1877
301 2984578067 2984576629 Bacteria 4248407
302 2984593417 2984592036 Bacteria 3670284
303 2990257581 2990256926 Bacteria 4252839
304 Ga0501070_0029836
305 JGI25407J50210_10001152
306 Ga0070658_10091107
307 Ga0070683_100055374
308 Ga0070680_100000001
309 Ga0070714_100002915
310 Ga0070714_100197291
311 Ga0070708_100002154
312 Ga0070708_100010335
313 Ga0070708_100042561
314 Ga0070708_100043507
315 Ga0070681_10017373
316 Ga0070681_10032427
317 Ga0070706_100000386
318 Ga0070706_100047048
319 Ga0070706_100085982
320 Ga0070707_100005262
321 Ga0070707_100030393
322 Ga0070707_100043677
323 Ga0070707_100120584
324 Ga0070698_100000387
325 Ga0070698_100001821
326 Ga0070698_100033331
327 Ga0070698_100081636
328 Ga0070698_100099592
329 Ga0070699_100006111
330 Ga0070699_100016226
331 Ga0070699_100030907
332 Ga0070684_100103498
333 Ga0070684_100109057
334 Ga0070697_100004974
335 Ga0070696_100018556
336 Ga0068857_100241575
337 Ga0081455_10006453
338 Ga0081455_10065783
339 Ga0081455_10069629
340 Ga0081455_10083043
341 Ga0081455_10138753
342 Ga0081538_10000195
343 Ga0081538_10000529
344 Ga0081538_10013293
345 Ga0081538_10035900
346 Ga0081539_10001899
347 Ga0081539_10004244
348 Ga0070717_10079908
349 Ga0075365_10117042
350 Ga0075364_10087377
351 Ga0075362_10063138
352 Ga0075428_100584281
353 Ga0075430_100010556
354 Ga0075431_100014009
355 Ga0075431_100504017
356 Ga0075433_10005478
357 Ga0075433_10034329
358 Ga0075433_10072273
359 Ga0075434_100002433
360 Ga0075434_100016494
361 Ga0075434_100207055
362 Ga0075429_100009573
363 Ga0075436_100042915
364 Ga0075435_100002214
365 Ga0099794_10000038
366 Ga0111539_10021896
367 Ga0111539_10034677
368 Ga0111539_10102275
369 Ga0111539_10139793
370 Ga0114129_10003823
371 Ga0114129_10063193
372 Ga0114129_10118247
373 Ga0114129_10118448
374 Ga0157370_10006232
375 Ga0182008_10001966
376 Ga0157376_10091820
377 Ga0163161_10094424
378 Ga0224712_10000960
379 Ga0207684_10000062
380 Ga0207684_10009169
381 Ga0207707_10027707
382 Ga0207693_10066446
383 Ga0207660_10000001
384 Ga0207662_10038745
385 Ga0207657_10080565
386 Ga0207646_10049325
387 Ga0207646_10072708
388 Ga0207646_10111847
389 Ga0207664_10144228
390 Ga0207661_10030211
391 Ga0207661_10197867
392 Ga0207667_10217180
393 Ga0207702_10053591
394 Ga0207674_10077181
395 Ga0209588_1000010
396 Ga0207428_10019304
397 Ga0207428_10176942
398 Ga0265319_1000367
399 Ga0265334_10025858
400 Ga0265318_10001025
401 Ga0265338_10005122
402 Ga0265338_10007410
403 Ga0265330_10018211
404 Ga0265320_10003780
405 Ga0265327_10006888
406 Ga0265327_10016310
407 Ga0265316_10007267
408 Ga0316575_10010820
409 Ga0265314_10004327
410 Ga0265342_10004057
411 Ga0307405_10126080
412 Ga0307409_100035894
413 Ga0307416_100343854
414 Ga0307416_100353027
415 Ga0307415_100009535
416 Ga0307415_100030342
417 Ga0373956_0070920
418 Ga0373931_0043705
419 Ga0373925_0000319
420 Ga0373925_0122350
421 Ga0395899_0010878
422 Ga0395899_0013578
423 Ga0395899_0017078
424 Ga0395899_0092146
425 Ga0395899_0116668
426 Ga0395899_0155302
427 Ga0395900_0001815
428 Ga0395900_0003246
429 Ga0395900_0010224
430 Ga0395900_0013924
431 Ga0395900_0015255
432 Ga0395900_0018081
433 Ga0395900_0035166
434 Ga0395900_0058566
435 Ga0395900_0098552
436 Ga0395900_0141134
437 Ga0395900_0169750
438 Ga0395900_0225706
439 Ga0395900_0240401
440 Ga0395898_0006446
441 Ga0395898_0010774
442 Ga0395898_0094780
443 Ga0395898_0123972
444 Ga0395898_0149866
445 Ga0395898_0274144
446 Ga0395898_0284297
447 Ga0395898_0408236
448 Ga0395905_0005093
449 Ga0395905_0010409
450 Ga0395905_0016789
451 Ga0395905_0018720
452 Ga0395905_0029405
453 Ga0395905_0044489
454 Ga0395905_0078379
455 Ga0395905_0176499
456 Ga0395905_0229200
457 Ga0395905_0279550
458 Ga0395901_0007832
459 Ga0395901_0014179
460 Ga0395901_0014626
461 Ga0395901_0023425
462 Ga0395901_0025799
463 Ga0395901_0052204
464 Ga0395901_0117887
465 Ga0395901_0188707
466 Ga0395901_0335390
467 Ga0400485_06691
468 Ga0400486_00666
469 Ga0451793_0099621
470 Ga0451800_1163797
471 Ga0451804_0287572
472 Ga0451845_0100244
473 Ga0451855_0106601
474 Ga0439463_005071
475 Ga0451577_0089182
476 Ga0466963_0008273
477 Ga0466963_0008474
478 Ga0466963_0037005
479 Ga0466963_0178624
480 Ga0466964_0039227
481 Ga0466957_0163915
482 Ga0466958_0000749
483 Ga0466958_0019637
484 Ga0466958_0021632
485 Ga0466958_0180331
486 Ga0466967_0056000
487 Ga0466967_0097700
488 Ga0466967_0224977
489 Ga0495651_0107293
490 Ga0495653_0028828
491 Ga0495653_0196846
492 Ga0495582_0155355
493 Ga0495584_0022488
494 Ga0495585_0010526
495 Ga0495630_0008120
496 Ga0495630_0030135
497 Ga0495630_0227298
498 Ga0495642_0023751
499 Ga0495652_0000003
500 Ga0495665_0024602
501 Ga0495640_0137664
502 Ga0495609_0079911
503 Ga0495667_0039591
504 Ga0495611_0180941
505 Ga0495659_0017543
506 Ga0495588_0154945
507 Ga0495657_0035697
508 Ga0495647_0019940
509 Ga0495589_0022234
510 Ga0495589_0065425
511 Ga0495600_0033147
512 Ga0495600_0088675
513 Ga0495680_0026707
514 Ga0495677_0013542
515 Ga0495593_0044173
516 Ga0496102_0003890
517 Ga0496102_0232541
518 Ga0496103_0031356
519 Ga0496103_0142957
520 Ga0496107_0067753
521 Ga0496108_0073069
522 Ga0496109_0002918
523 Ga0496109_0204280
524 Ga0496110_0002408
525 Ga0496110_0069165
526 Ga0496110_0201838
527 Ga0496111_0006303
528 Ga0496111_0026368
529 Ga0496111_0096322
530 Ga0496112_0006334
531 Ga0496112_0066475
532 Ga0496112_0209254
533 Ga0501034_0015736
534 Ga0501036_0002243
535 Ga0501036_0043669
536 Ga0501036_0094412
537 Ga0501038_0012717
538 Ga0501039_0004697
539 Ga0501040_0005496
540 Ga0501043_0027979
541 Ga0501047_0002553
542 Ga0501067_0002731
543 Ga0501067_0030467
544 Ga0501068_0032844
545 Ga0501069_0002250
546 Ga0501069_0024347
547 Ga0501070_0009486
548 Ga0501070_0021567
549 Ga0501071_0004025
550 Ga0501072_0000002
551 Ga0501072_0005633
552 Ga0501072_0007637
553 Ga0501072_0065962
554 Ga0501073_0007466
555 Ga0501073_0038452
556 Ga0501074_0041708
557 Ga0501074_0045996
558 Ga0501075_0001858
559 Ga0501075_0004445
560 Ga0501076_0002178
561 Ga0501076_0018156
562 Ga0501077_0004311
563 Ga0501077_0066944
564 Ga0501079_0005634
565 Ga0501079_0008747
566 Ga0501079_0076833
567 Ga0501080_0078407
568 Ga0501080_0101903
569 Ga0501080_0214678
570 Ga0501081_0001123
571 Ga0501083_0000684
572 Ga0501083_0006553
573 Ga0501044_0011163
574 nmdc:mga05p37_15961_c1
575 nmdc:mga05p37_23763_c2
576 nmdc:mga05p37_34028_c1
577 nmdc:mga09592_26388_c1
578 nmdc:mga09592_50199_c1
579 nmdc:mga06r32_21498_c1
580 nmdc:mga06r32_445806_c1
581 nmdc:mga06r32_81234_c1
582 nmdc:mga0n895_269009_c1
583 nmdc:mga0n895_4658_c1
584 nmdc:mga0n895_86024_c1
585 nmdc:mga0rr50_145149_c1
586 nmdc:mga0rr50_49126_c1
587 nmdc:mga0rr50_8505_c1
588 nmdc:mga08x19_5897_c1
589 nmdc:mga0a205_184512_c1
590 nmdc:mga0a205_211333_c1
591 nmdc:mga0a205_29864_c1
592 Ga0495619_0024700
593 Ga0495619_0068892
594 Ga0500616_0006411
595 Ga0501084_0000054
596 Ga0590075_009519
597 Ga0501082_0000035
598 Ga0501082_0145314
599 Ga0466962_0159270
600 Ga0530510_0002280
601 Ga0530510_0076181
602 Ga0530510_0078756
603 Ga0530510_0126774
604 2984578067
605 2984593417
606 2990257581

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

254

403

0.99

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

32

144

0.99

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

269

392

0.97

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

148

242

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7y0a-assembly1.cif.gz_B crystal structure of human short-chain acyl-coa dehydrogenase 0.9631 4 355
1buc-assembly1.cif.gz_A three-dimensional structure of butyryl-coa dehydrogenase from megasphaera elsdenii 0.9619 1 355
2d29-assembly1.cif.gz_A structural study on project id tt0172 from thermus thermophilus hb8 0.9613 3 357
2vig-assembly2.cif.gz_G crystal structure of human short-chain acyl coa dehydrogenase 0.9606 5 355
1ivh-assembly1.cif.gz_B structure of human isovaleryl-coa dehydrogenase at 2.6 angstroms resolution: structural basis for substrate specificity 0.9605 2 358
ID Description Score Start End Superfamily
af_Q0DCC7_1_83_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9752 136 212 2.40.110.10
af_H2KYU0_266_380_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9683 259 355 1.20.140.10
4ktoC02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9663 114 221 2.40.110.10
af_A4HSY0_160_267_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9653 114 219 2.40.110.10
af_A0A0G2L3J0_183_286_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9632 260 357 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A1M4ZYU6-F1-model_v4 Acyl-CoA dehydrogenase, C-terminal domain 0.9806 265 355 GO:0003995
AF-A0A6N9XZ74-F1-model_v4 deleted 0.9737 242 355
AF-A0A524GWN8-F1-model_v4 Acyl-CoA dehydrogenase 0.9713 255 357 GO:0003995
AF-A0A7X7U7M6-F1-model_v4 deleted 0.9698 12 355
AF-A0A3M1LZD7-F1-model_v4 Acyl-CoA dehydrogenase 0.9687 1 357 GO:0003995
GO:0050660

Map