F397269

General Info

Members Datasets Scaffolds Average Seq Length
303 232 606 528

Family's Representative Sequence

Representative Sequence 3300049570|Ga0501033_0022861|Ga0501033_0022861_2550_4328
Length 592
Sequence MVMALPAPDFGGAGADVYCRLRSRPASNAVMSDTSAIGPKSRTGLKSRQKARLRHVPVTRRLAAWIAALAHDERTSLRFVIVFAFAHALLWTIILTALKGAQDVHMDVAEAYAWGQKFLLGYGKHPPLAGWVAGVWFRIFPVTDWATYALAMTVAGVGLVLCWLIAVRVVDHRRAMFTVAMLAIYPIFNIKGYKYNPDLLQLVTLPLVVLAYLHAFDKRTVRSGIWLGLAGAAAVMTKYWVLTMIGAVGLAALLHPQRLAFLRSPAPWIAILTMAVALTPHLLWLRQVDFVPLTYAEDIYGSRPFSESLKLGIGYGLHNTGLLLVAVLAAYVALTWKLQWWKSIRTKGFFREIVDSAKRPWMRGPNADVDRAQALNIWLIQIIVALGPPLGALIFGIYMKTDWGISLFFLVPLALIAIPALRVTQMALIRLLVIWAIFTFAMLLLSPIIAAQHVRQHGAGAAPFLPRSEFALQLTEAWRARFNTRWRIVAANMAAGEPMTFYSPDHPLTFTPGELWSSGLTTREDLDKWGFIGICDTTDYYLAKCEAWMQQNAPDAEQLNITARRYFHGKAGPAVRWKIWIKGPPRPETEDE

Samples

Sample ID Description Type Environment
1 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
28 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
29 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
30 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
31 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
32 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
33 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
34 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
50 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
51 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
52 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
53 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
56 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
76 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
77 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
78 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
83 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
84 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
85 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
86 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
87 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
88 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
89 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
90 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
92 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
93 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
96 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
97 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
98 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
99 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
102 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
103 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
104 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
105 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
106 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
107 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
108 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
109 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
110 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
111 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
112 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
113 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
114 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
117 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
118 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
123 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
124 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
125 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
126 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
127 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
128 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
129 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
130 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
131 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
132 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
133 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
136 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
137 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
138 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
139 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
140 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
141 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
142 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
143 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
144 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
145 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
146 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
149 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
150 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
151 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
152 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
153 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
154 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
155 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
156 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
157 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
158 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
159 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
160 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
161 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
162 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
163 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
164 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
165 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
166 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
167 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
168 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
169 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
170 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
171 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
172 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
173 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
174 2513237102 Bradyrhizobium japonicum USDA 135 Isolate Nodule
175 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
176 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
177 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
178 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
179 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
180 2602042107 Bradyrhizobium sp. NFR13 Isolate Rhizoplane
181 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
182 2617270741 Bradyrhizobium yuanmingense CCBAU 10071 Isolate Nodule
183 2643221651 Afipia sp. Root123D2 Isolate Unclassified
184 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
185 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
186 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
187 2791355196 Bradyrhizobium sp. Y36 Isolate Nodule
188 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
189 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
190 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
191 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
192 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
193 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
194 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
195 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
196 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
197 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
198 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
199 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
200 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
201 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
202 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
203 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
204 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
205 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
206 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
207 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
208 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
209 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
210 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
211 2857509624 Bradyrhizobium sp. R-73088 Isolate Unclassified
212 2857524615 Tardiphaga sp. R-73074 Isolate Unclassified
213 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
214 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
215 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
216 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
217 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
218 2885366525 Bradyrhizobium sp. LVM 105 Isolate Unclassified
219 2888419890 Bradyrhizobium sp. 1(2017) 63S1MB Isolate Unclassified
220 2893066018 Tardiphaga sp. P9-11 Isolate Unclassified
221 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified
222 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
223 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
224 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
225 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
226 2919073203 Tardiphaga robiniae 1155 Isolate Unclassified
227 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
228 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
229 3005506211 Bradyrhizobium diazoefficiens SZCCT0449 Isolate Unclassified
230 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
231 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
232 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 79.87
Metatranscriptomes 0
Isolates 20.13

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.2
Nodule 14.19
Rhizoplane 6.6
Rhizosphere 47.19
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501033_0022861 3300049570 Bacteria 4714
2 JGI25153J46596_10006820 3300003215 Bacteria 5716
3 JGI25153J46596_10018970 3300003215 Bacteria 2650
4 Ga0055531_10015746 3300003794 Bacteria 3308
5 Ga0070683_100051555 3300005329 Bacteria 3810
6 Ga0070680_100022728 3300005336 Bacteria 4996
7 Ga0068868_100025147 3300005338 Bacteria 4523
8 Ga0070671_100135539 3300005355 Bacteria 2076
9 Ga0070674_100029321 3300005356 Bacteria 3623
10 Ga0070673_100044411 3300005364 Bacteria 3441
11 Ga0070713_100035536 3300005436 Bacteria 4012
12 Ga0070663_100029875 3300005455 Bacteria 3729
13 Ga0070663_100062546 3300005455 Bacteria 2684
14 Ga0070663_100081743 3300005455 Bacteria 2375
15 Ga0070681_10004755 3300005458 Bacteria 13012
16 Ga0070698_100124273 3300005471 Bacteria 2537
17 Ga0070679_100007527 3300005530 Bacteria 10186
18 Ga0070679_100018335 3300005530 Bacteria 6790
19 Ga0070684_100014532 3300005535 Bacteria 6381
20 Ga0068853_100003616 3300005539 Bacteria 11845
21 Ga0068853_100067999 3300005539 Bacteria 3096
22 Ga0068855_100065704 3300005563 Bacteria 4229
23 Ga0068855_100084572 3300005563 Bacteria 3673
24 Ga0068857_100025981 3300005577 Bacteria 5158
25 Ga0068854_100021643 3300005578 Bacteria 4365
26 Ga0068856_100049584 3300005614 Bacteria 4138
27 Ga0068852_100043186 3300005616 Bacteria 3822
28 Ga0068864_100015227 3300005618 Bacteria 6396
29 Ga0068860_100005539 3300005843 Bacteria 12785
30 Ga0068862_100095908 3300005844 Bacteria 2588
31 Ga0081455_10078546 3300005937 Bacteria 2712
32 Ga0081540_1018645 3300005983 Bacteria 4249
33 Ga0081540_1030489 3300005983 Bacteria 2986
34 Ga0081540_1054798 3300005983 Bacteria 1946
35 Ga0075365_10045275 3300006038 Bacteria 2886
36 Ga0075365_10089945 3300006038 Bacteria 2090
37 Ga0075363_100019976 3300006048 Bacteria 3355
38 Ga0075367_10022619 3300006178 Bacteria 3528
39 Ga0075369_10030568 3300006186 Bacteria 2269
40 Ga0075370_10064038 3300006353 Bacteria 2096
41 Ga0099824_1009956 3300006942 Bacteria 11459
42 Ga0099822_1003320 3300006943 Bacteria 20578
43 Ga0099823_1031057 3300006944 Bacteria 4433
44 Ga0105240_10027735 3300009093 Bacteria 7411
45 Ga0105240_10059761 3300009093 Bacteria 4755
46 Ga0105240_10073170 3300009093 Bacteria 4232
47 Ga0105240_10272403 3300009093 Bacteria 1948
48 Ga0105245_10058433 3300009098 Bacteria 3472
49 Ga0105245_10231856 3300009098 Bacteria 1786
50 Ga0105241_10070672 3300009174 Bacteria 2709
51 Ga0105237_10014413 3300009545 Bacteria 8267
52 Ga0105238_10018259 3300009551 Bacteria 7134
53 Ga0105238_10024432 3300009551 Bacteria 6159
54 Ga0105238_10049821 3300009551 Bacteria 4217
55 Ga0105239_10054533 3300010375 Bacteria 4386
56 Ga0105239_10161980 3300010375 Bacteria 2500
57 Ga0105239_10205429 3300010375 Bacteria 2207
58 Ga0157370_10081306 3300013104 Bacteria 3049
59 Ga0157370_10121361 3300013104 Bacteria 2440
60 Ga0157370_10129751 3300013104 Bacteria 2352
61 Ga0157369_10010577 3300013105 Bacteria 10503
62 Ga0157369_10029140 3300013105 Bacteria 6102
63 Ga0157369_10057631 3300013105 Bacteria 4190
64 Ga0157378_10063486 3300013297 Bacteria 3300
65 Ga0163162_10051548 3300013306 Bacteria 4130
66 Ga0163162_10276844 3300013306 Bacteria 1810
67 Ga0157372_10165801 3300013307 Bacteria 2555
68 Ga0157375_10022846 3300013308 Bacteria 5762
69 Ga0157379_10078421 3300014968 Bacteria 2958
70 Ga0157376_10024253 3300014969 Bacteria 4759
71 Ga0214544_1000007 3300021320 Bacteria 379989
72 Ga0214542_1000216 3300021321 Bacteria 92614
73 Ga0214542_1017002 3300021321 Bacteria 6774
74 Ga0214545_1000118 3300021324 Bacteria 92737
75 Ga0214545_1017334 3300021324 Bacteria 7017
76 Ga0214543_1000009 3300021327 Bacteria 384302
77 Ga0209677_104811 3300025253 Bacteria 3738
78 Ga0209564_1001154 3300025295 Bacteria 30904
79 Ga0209758_1000030 3300025297 Bacteria 509217
80 Ga0209758_1002546 3300025297 Bacteria 18379
81 Ga0209257_1005466 3300025304 Bacteria 8912
82 Ga0207647_10000785 3300025904 Bacteria 24631
83 Ga0207654_10059385 3300025911 Bacteria 2230
84 Ga0207707_10001959 3300025912 Bacteria 18715
85 Ga0207695_10056619 3300025913 Bacteria 4078
86 Ga0207695_10126061 3300025913 Bacteria 2522
87 Ga0207671_10071044 3300025914 Bacteria 2596
88 Ga0207671_10075697 3300025914 Bacteria 2518
89 Ga0207671_10107186 3300025914 Bacteria 2122
90 Ga0207660_10003702 3300025917 Bacteria 9962
91 Ga0207660_10015501 3300025917 Bacteria 5031
92 Ga0207657_10003938 3300025919 Bacteria 15764
93 Ga0207652_10005955 3300025921 Bacteria 9865
94 Ga0207652_10007422 3300025921 Bacteria 8839
95 Ga0207694_10147433 3300025924 Bacteria 1895
96 Ga0207700_10073920 3300025928 Bacteria 2634
97 Ga0207661_10000379 3300025944 Bacteria 28634
98 Ga0207667_10050852 3300025949 Bacteria 4371
99 Ga0207667_10216066 3300025949 Bacteria 1965
100 Ga0207658_10093645 3300025986 Bacteria 2336
101 Ga0207639_10062475 3300026041 Bacteria 2880
102 Ga0207678_10023956 3300026067 Bacteria 5337
103 Ga0207678_10051821 3300026067 Bacteria 3542
104 Ga0207678_10059697 3300026067 Bacteria 3282
105 Ga0207678_10078039 3300026067 Bacteria 2836
106 Ga0207678_10126963 3300026067 Bacteria 2175
107 Ga0207702_10006079 3300026078 Bacteria 10471
108 Ga0207674_10051726 3300026116 Bacteria 4192
109 Ga0207683_10025248 3300026121 Bacteria 5124
110 Ga0207683_10062370 3300026121 Bacteria 3283
111 Ga0209389_1000015 3300027296 Bacteria 188311
112 Ga0209589_1000276 3300027357 Bacteria 65299
113 Ga0209489_100072 3300027361 Bacteria 138111
114 Ga0209489_100714 3300027361 Bacteria 65299
115 Ga0209700_100034 3300027363 Bacteria 197276
116 Ga0209700_100732 3300027363 Bacteria 65299
117 Ga0268266_10054069 3300028379 Bacteria 3450
118 Ga0268264_10000187 3300028381 Bacteria 129270
119 Ga0265338_10009637 3300028800 Bacteria 11461
120 Ga0307508_10000613 3300031616 Bacteria 42773
121 Ga0307507_10054171 3300033179 Bacteria 3821
122 Ga0373926_0004011 3300035083 Bacteria 4808
123 Ga0373943_0045986 3300035170 Bacteria 2129
124 Ga0373946_0003897 3300035171 Bacteria 5304
125 Ga0373955_0045387 3300035172 Bacteria 2371
126 Ga0373933_0073816 3300035724 Bacteria 2079
127 Ga0373947_0006546 3300035725 Bacteria 6757
128 Ga0373925_0015943 3300037068 Bacteria 5439
129 Ga0395900_0031479 3300037418 Bacteria 5451
130 Ga0395898_0035741 3300037466 Bacteria 4937
131 Ga0395905_0004327 3300037471 Bacteria 14794
132 Ga0436365_1037910 3300039437 Bacteria 6175
133 Ga0436361_0415653 3300039447 Bacteria 2970
134 Ga0436361_0536082 3300039447 Bacteria 3581
135 Ga0466972_0000264 3300044658 Bacteria 33879
136 Ga0466972_0057465 3300044658 Bacteria 1868
137 Ga0466970_0063813 3300044765 Bacteria 1975
138 Ga0466970_0091672 3300044765 Bacteria 1650
139 Ga0466960_0023227 3300044901 Bacteria 2782
140 Ga0466959_0019169 3300045049 Bacteria 5030
141 Ga0466959_0065324 3300045049 Bacteria 2640
142 Ga0466967_0136790 3300045976 Bacteria 2279
143 Ga0495592_0080395 3300046454 Bacteria 2359
144 Ga0495629_0005545 3300046459 Bacteria 9419
145 Ga0495629_0076525 3300046459 Bacteria 2337
146 Ga0495605_0033722 3300046474 Bacteria 2597
147 Ga0495639_0005486 3300046475 Bacteria 5460
148 Ga0495639_0046545 3300046475 Bacteria 1964
149 Ga0495616_0008864 3300046513 Bacteria 5918
150 Ga0495618_0023742 3300046514 Bacteria 3795
151 Ga0495628_0132171 3300046516 Bacteria 1908
152 Ga0495632_0041972 3300046519 Bacteria 2295
153 Ga0495648_0000581 3300046524 Bacteria 39115
154 Ga0495652_0123579 3300046529 Bacteria 2060
155 Ga0495654_0023549 3300046530 Bacteria 3188
156 Ga0495665_0017377 3300046531 Bacteria 3869
157 Ga0495640_0016242 3300046533 Bacteria 5573
158 Ga0495640_0053369 3300046533 Bacteria 2771
159 Ga0495668_0028174 3300046616 Bacteria 3178
160 Ga0495668_0073524 3300046616 Bacteria 1877
161 Ga0495625_0061422 3300046660 Bacteria 2659
162 Ga0495635_0040207 3300046663 Bacteria 3231
163 Ga0495624_0024067 3300046690 Bacteria 4009
164 Ga0495670_0009043 3300046691 Bacteria 4901
165 Ga0495604_0007178 3300047317 Bacteria 8823
166 Ga0495676_0020621 3300047321 Bacteria 5777
167 Ga0495684_0021790 3300047471 Bacteria 4933
168 Ga0495593_0003341 3300047673 Bacteria 9611
169 Ga0495626_0021547 3300048091 Bacteria 3197
170 Ga0496100_0083070 3300048903 Bacteria 2167
171 Ga0496101_0013819 3300048904 Bacteria 5419
172 Ga0496101_0107931 3300048904 Bacteria 2092
173 Ga0496102_0009931 3300048905 Bacteria 8187
174 Ga0496103_0019465 3300048906 Bacteria 4078
175 Ga0496104_0002055 3300048907 Bacteria 17481
176 Ga0496104_0046091 3300048907 Bacteria 4103
177 Ga0496104_0172167 3300048907 Bacteria 2076
178 Ga0496105_0021663 3300048908 Bacteria 5201
179 Ga0496106_0001854 3300048909 Bacteria 15822
180 Ga0496106_0039237 3300048909 Bacteria 3546
181 Ga0496108_0062832 3300048911 Bacteria 3126
182 Ga0496110_0051461 3300048913 Bacteria 3619
183 Ga0496111_0029882 3300048914 Bacteria 3872
184 Ga0496112_0068152 3300048915 Bacteria 3513
185 Ga0496113_0003915 3300048916 Bacteria 9029
186 Ga0496114_0054186 3300048917 Bacteria 3345
187 Ga0496115_0015519 3300048918 Bacteria 5780
188 Ga0496115_0043348 3300048918 Bacteria 3588
189 Ga0496116_0006737 3300048919 Bacteria 10345
190 Ga0496118_0004108 3300048921 Bacteria 17620
191 Ga0496118_0024046 3300048921 Bacteria 5271
192 Ga0496118_0075231 3300048921 Bacteria 2409
193 Ga0496118_0083532 3300048921 Bacteria 2232
194 Ga0496119_0009075 3300048922 Bacteria 8617
195 Ga0496119_0035915 3300048922 Bacteria 3240
196 Ga0496120_0044016 3300048923 Bacteria 2596
197 Ga0496121_0000451 3300048924 Bacteria 80840
198 Ga0496121_0007720 3300048924 Bacteria 12905
199 Ga0496121_0037494 3300048924 Bacteria 4304
200 Ga0496121_0081340 3300048924 Bacteria 2564
201 Ga0496121_0087973 3300048924 Bacteria 2437
202 Ga0496122_0101945 3300048925 Bacteria 1915
203 Ga0496124_0005277 3300048927 Bacteria 14618
204 Ga0496124_0131142 3300048927 Bacteria 1991
205 Ga0496125_0004351 3300048928 Bacteria 16430
206 Ga0496125_0015616 3300048928 Bacteria 7329
207 Ga0496125_0049991 3300048928 Bacteria 3467
208 Ga0496126_0002484 3300048929 Bacteria 24807
209 Ga0496126_0011644 3300048929 Bacteria 9078
210 Ga0496126_0129308 3300048929 Bacteria 2184
211 Ga0501047_0069234 3300049581 Bacteria 3398
212 Ga0501047_0126285 3300049581 Bacteria 2438
213 Ga0501070_0039793 3300049586 Bacteria 3921
214 Ga0501080_0004892 3300049742 Bacteria 11942
215 nmdc:mga03n38_1889_c1 3300050490 Bacteria 6266
216 nmdc:mga00v17_116695_c1 3300050491 Bacteria 1697
217 nmdc:mga00v17_60266_c1 3300050491 Bacteria 2330
218 nmdc:mga0yw44_78565_c1 3300050492 Bacteria 2064
219 nmdc:mga06z11_18391_c1 3300050494 Bacteria 3191
220 nmdc:mga07m45_68196_c1 3300050496 Bacteria 2022
221 Ga0495601_0042053 3300053077 Bacteria 2866
222 Ga0495612_0007862 3300053078 Bacteria 4348
223 Ga0500651_0014942 3300053093 Bacteria 4758
224 Ga0500651_0037307 3300053093 Bacteria 3062
225 Ga0500566_0000931 3300053094 Bacteria 16746
226 Ga0500566_0008094 3300053094 Bacteria 6221
227 Ga0500556_0000005 3300053104 Bacteria 581135
228 Ga0500592_002321 3300053116 Bacteria 3068
229 Ga0500595_001879 3300053119 Bacteria 10842
230 Ga0500595_003129 3300053119 Bacteria 7838
231 Ga0500642_0000009 3300053130 Bacteria 286829
232 Ga0500652_006280 3300053131 Bacteria 3815
233 Ga0500559_0001674 3300053136 Bacteria 12239
234 Ga0500559_0003329 3300053136 Bacteria 7959
235 Ga0500568_0003889 3300053139 Bacteria 8131
236 Ga0500616_0000035 3300053153 Bacteria 394242
237 Ga0500616_0000038 3300053153 Bacteria 386801
238 Ga0500622_0003457 3300053156 Bacteria 10538
239 Ga0500634_0026225 3300053161 Bacteria 3174
240 Ga0500639_002805 3300053163 Bacteria 8756
241 Ga0500636_0038461 3300053177 Bacteria 2830
242 Ga0500637_0057512 3300053178 Bacteria 2223
243 2513625615 2513237092 Bacteria 8341956
244 2513698138 2513237101 Bacteria 7952346
245 2513701745 2513237102 Bacteria 7703324
246 2513874026 2513237139 Bacteria 8737671
247 2513889662 2513237141 Bacteria 8496279
248 2514010204 2513237161 Bacteria 8871253
249 2517108096 2517093001 Bacteria 9002274
250 2524438594 2524023205 Bacteria 8918781
251 2603857962 2602042107 Bacteria 6226103
252 2617350155 2617270735 Bacteria 9163226
253 2617377151 2617270741 Bacteria 8201522
254 2644290630 2643221651 Bacteria 4798932
255 2723849192 2721755755 Bacteria 8322773
256 2728749271 2728368998 Bacteria 8720350
257 2745077689 2744054633 Bacteria 8678936
258 2793059151 2791355196 Bacteria 7323613
259 2805920384 2802429603 Bacteria 8777136
260 2824605828 2824600985 Bacteria 8488197
261 2824611958 2824609381 Bacteria 8672835
262 2824622834 2824617872 Bacteria 8814715
263 2824631923 2824626560 Bacteria 8813858
264 2824639130 2824635225 Bacteria 8785348
265 2824650744 2824644064 Bacteria 8743947
266 2824658795 2824653114 Bacteria 8493680
267 2824676903 2824671348 Bacteria 8369588
268 2824693280 2824687955 Bacteria 8360029
269 2824701524 2824696289 Bacteria 8335049
270 2824719446 2824714736 Bacteria 8717648
271 2824734128 2824732956 Bacteria 7810675
272 2824749190 2824746037 Bacteria 7911610
273 2824780111 2824773399 Bacteria 8360218
274 2838125884 2838122688 Bacteria 8803140
275 2841942722 2841941048 Bacteria 8688029
276 2841952926 2841949485 Bacteria 8680857
277 2841971045 2841966195 Bacteria 8673214
278 2841977696 2841974524 Bacteria 8931498
279 2841984743 2841983080 Bacteria 8395090
280 2847939775 2847930680 Bacteria 9342022
281 2847943062 2847939898 Bacteria 8606328
282 2857515770 2857509624 Bacteria 7472071
283 2857527342 2857524615 Bacteria 6615449
284 2874608590 2874604998 Bacteria 7834745
285 2874617608 2874612657 Bacteria 8252029
286 2874622018 2874620515 Bacteria 8290088
287 2876763422 2876761206 Bacteria 10111113
288 2879089965 2879083081 Bacteria 8587928
289 2885369063 2885366525 Bacteria 8326213
290 2888427289 2888419890 Bacteria 7857137
291 2893071887 2893066018 Bacteria 6158120
292 2904669390 2904666416 Bacteria 8226587
293 2904692156 2904690495 Bacteria 9412302
294 2906645608 2906643746 Bacteria 8722424
295 2908756688 2908756301 Bacteria 8864324
296 2908783065 2908775508 Bacteria 8092255
297 2919078454 2919073203 Bacteria 6531949
298 2922364494 2922361189 Bacteria 7436256
299 3005490553 3005483717 Bacteria 7877331
300 3005506426 3005506211 Bacteria 6943378
301 3005588926 3005587118 Bacteria 7794411
302 8006998397 8006994254 Bacteria 8309700
303 8056694866 8056689827 Bacteria 6712655
304 Ga0501033_0022861
305 JGI25153J46596_10006820
306 JGI25153J46596_10018970
307 Ga0055531_10015746
308 Ga0070683_100051555
309 Ga0070680_100022728
310 Ga0068868_100025147
311 Ga0070671_100135539
312 Ga0070674_100029321
313 Ga0070673_100044411
314 Ga0070713_100035536
315 Ga0070663_100029875
316 Ga0070663_100062546
317 Ga0070663_100081743
318 Ga0070681_10004755
319 Ga0070698_100124273
320 Ga0070679_100007527
321 Ga0070679_100018335
322 Ga0070684_100014532
323 Ga0068853_100003616
324 Ga0068853_100067999
325 Ga0068855_100065704
326 Ga0068855_100084572
327 Ga0068857_100025981
328 Ga0068854_100021643
329 Ga0068856_100049584
330 Ga0068852_100043186
331 Ga0068864_100015227
332 Ga0068860_100005539
333 Ga0068862_100095908
334 Ga0081455_10078546
335 Ga0081540_1018645
336 Ga0081540_1030489
337 Ga0081540_1054798
338 Ga0075365_10045275
339 Ga0075365_10089945
340 Ga0075363_100019976
341 Ga0075367_10022619
342 Ga0075369_10030568
343 Ga0075370_10064038
344 Ga0099824_1009956
345 Ga0099822_1003320
346 Ga0099823_1031057
347 Ga0105240_10027735
348 Ga0105240_10059761
349 Ga0105240_10073170
350 Ga0105240_10272403
351 Ga0105245_10058433
352 Ga0105245_10231856
353 Ga0105241_10070672
354 Ga0105237_10014413
355 Ga0105238_10018259
356 Ga0105238_10024432
357 Ga0105238_10049821
358 Ga0105239_10054533
359 Ga0105239_10161980
360 Ga0105239_10205429
361 Ga0157370_10081306
362 Ga0157370_10121361
363 Ga0157370_10129751
364 Ga0157369_10010577
365 Ga0157369_10029140
366 Ga0157369_10057631
367 Ga0157378_10063486
368 Ga0163162_10051548
369 Ga0163162_10276844
370 Ga0157372_10165801
371 Ga0157375_10022846
372 Ga0157379_10078421
373 Ga0157376_10024253
374 Ga0214544_1000007
375 Ga0214542_1000216
376 Ga0214542_1017002
377 Ga0214545_1000118
378 Ga0214545_1017334
379 Ga0214543_1000009
380 Ga0209677_104811
381 Ga0209564_1001154
382 Ga0209758_1000030
383 Ga0209758_1002546
384 Ga0209257_1005466
385 Ga0207647_10000785
386 Ga0207654_10059385
387 Ga0207707_10001959
388 Ga0207695_10056619
389 Ga0207695_10126061
390 Ga0207671_10071044
391 Ga0207671_10075697
392 Ga0207671_10107186
393 Ga0207660_10003702
394 Ga0207660_10015501
395 Ga0207657_10003938
396 Ga0207652_10005955
397 Ga0207652_10007422
398 Ga0207694_10147433
399 Ga0207700_10073920
400 Ga0207661_10000379
401 Ga0207667_10050852
402 Ga0207667_10216066
403 Ga0207658_10093645
404 Ga0207639_10062475
405 Ga0207678_10023956
406 Ga0207678_10051821
407 Ga0207678_10059697
408 Ga0207678_10078039
409 Ga0207678_10126963
410 Ga0207702_10006079
411 Ga0207674_10051726
412 Ga0207683_10025248
413 Ga0207683_10062370
414 Ga0209389_1000015
415 Ga0209589_1000276
416 Ga0209489_100072
417 Ga0209489_100714
418 Ga0209700_100034
419 Ga0209700_100732
420 Ga0268266_10054069
421 Ga0268264_10000187
422 Ga0265338_10009637
423 Ga0307508_10000613
424 Ga0307507_10054171
425 Ga0373926_0004011
426 Ga0373943_0045986
427 Ga0373946_0003897
428 Ga0373955_0045387
429 Ga0373933_0073816
430 Ga0373947_0006546
431 Ga0373925_0015943
432 Ga0395900_0031479
433 Ga0395898_0035741
434 Ga0395905_0004327
435 Ga0436365_1037910
436 Ga0436361_0415653
437 Ga0436361_0536082
438 Ga0466972_0000264
439 Ga0466972_0057465
440 Ga0466970_0063813
441 Ga0466970_0091672
442 Ga0466960_0023227
443 Ga0466959_0019169
444 Ga0466959_0065324
445 Ga0466967_0136790
446 Ga0495592_0080395
447 Ga0495629_0005545
448 Ga0495629_0076525
449 Ga0495605_0033722
450 Ga0495639_0005486
451 Ga0495639_0046545
452 Ga0495616_0008864
453 Ga0495618_0023742
454 Ga0495628_0132171
455 Ga0495632_0041972
456 Ga0495648_0000581
457 Ga0495652_0123579
458 Ga0495654_0023549
459 Ga0495665_0017377
460 Ga0495640_0016242
461 Ga0495640_0053369
462 Ga0495668_0028174
463 Ga0495668_0073524
464 Ga0495625_0061422
465 Ga0495635_0040207
466 Ga0495624_0024067
467 Ga0495670_0009043
468 Ga0495604_0007178
469 Ga0495676_0020621
470 Ga0495684_0021790
471 Ga0495593_0003341
472 Ga0495626_0021547
473 Ga0496100_0083070
474 Ga0496101_0013819
475 Ga0496101_0107931
476 Ga0496102_0009931
477 Ga0496103_0019465
478 Ga0496104_0002055
479 Ga0496104_0046091
480 Ga0496104_0172167
481 Ga0496105_0021663
482 Ga0496106_0001854
483 Ga0496106_0039237
484 Ga0496108_0062832
485 Ga0496110_0051461
486 Ga0496111_0029882
487 Ga0496112_0068152
488 Ga0496113_0003915
489 Ga0496114_0054186
490 Ga0496115_0015519
491 Ga0496115_0043348
492 Ga0496116_0006737
493 Ga0496118_0004108
494 Ga0496118_0024046
495 Ga0496118_0075231
496 Ga0496118_0083532
497 Ga0496119_0009075
498 Ga0496119_0035915
499 Ga0496120_0044016
500 Ga0496121_0000451
501 Ga0496121_0007720
502 Ga0496121_0037494
503 Ga0496121_0081340
504 Ga0496121_0087973
505 Ga0496122_0101945
506 Ga0496124_0005277
507 Ga0496124_0131142
508 Ga0496125_0004351
509 Ga0496125_0015616
510 Ga0496125_0049991
511 Ga0496126_0002484
512 Ga0496126_0011644
513 Ga0496126_0129308
514 Ga0501047_0069234
515 Ga0501047_0126285
516 Ga0501070_0039793
517 Ga0501080_0004892
518 nmdc:mga03n38_1889_c1
519 nmdc:mga00v17_116695_c1
520 nmdc:mga00v17_60266_c1
521 nmdc:mga0yw44_78565_c1
522 nmdc:mga06z11_18391_c1
523 nmdc:mga07m45_68196_c1
524 Ga0495601_0042053
525 Ga0495612_0007862
526 Ga0500651_0014942
527 Ga0500651_0037307
528 Ga0500566_0000931
529 Ga0500566_0008094
530 Ga0500556_0000005
531 Ga0500592_002321
532 Ga0500595_001879
533 Ga0500595_003129
534 Ga0500642_0000009
535 Ga0500652_006280
536 Ga0500559_0001674
537 Ga0500559_0003329
538 Ga0500568_0003889
539 Ga0500616_0000035
540 Ga0500616_0000038
541 Ga0500622_0003457
542 Ga0500634_0026225
543 Ga0500639_002805
544 Ga0500636_0038461
545 Ga0500637_0057512
546 2513625615
547 2513698138
548 2513701745
549 2513874026
550 2513889662
551 2514010204
552 2517108096
553 2524438594
554 2603857962
555 2617350155
556 2617377151
557 2644290630
558 2723849192
559 2728749271
560 2745077689
561 2793059151
562 2805920384
563 2824605828
564 2824611958
565 2824622834
566 2824631923
567 2824639130
568 2824650744
569 2824658795
570 2824676903
571 2824693280
572 2824701524
573 2824719446
574 2824734128
575 2824749190
576 2824780111
577 2838125884
578 2841942722
579 2841952926
580 2841971045
581 2841977696
582 2841984743
583 2847939775
584 2847943062
585 2857515770
586 2857527342
587 2874608590
588 2874617608
589 2874622018
590 2876763422
591 2879089965
592 2885369063
593 2888427289
594 2893071887
595 2904669390
596 2904692156
597 2906645608
598 2908756688
599 2908783065
600 2919078454
601 2922364494
602 3005490553
603 3005506426
604 3005588926
605 8006998397
606 8056694866

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13231

PMT_2

Dolichyl-phosphate-mannose-protein mannosyltransferase

124

284

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6p2r-assembly1.cif.gz_B structure of s. cerevisiae protein o-mannosyltransferase pmt1-pmt2 complex bound to the sugar donor 0.6293 40 240
6p25-assembly1.cif.gz_A structure of s. cerevisiae protein o-mannosyltransferase pmt1-pmt2 complex bound to the sugar donor and a peptide acceptor 0.5633 24 262
7bx8-assembly1.cif.gz_B "mycobacterium smegmatis arabinosyltransferase complex embb2-acpm2 in symmetric ""resting state""" 0.5563 81 369
5f15-assembly1.cif.gz_A crystal structure of arnt from cupriavidus metallidurans bound to undecaprenyl phosphate 0.5554 40 528
7bvg-assembly1.cif.gz_B cryo-em structure of mycobacterium smegmatis arabinosyltransferase emba-embb-acpm2 in complex with di-arabinose. 0.5473 39 369
ID Description Score Start End Superfamily
af_O06152_111_270_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.7955 88 239 1.20.1250.20
af_O06152_111_270_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.7557 88 239 1.20.1250.20
af_Q4DYM9_3_153_2.60.40.150 Mainly Beta;Sandwich;Immunoglobulin-like;C2 domain 0.6654 507 535 2.60.40.150
1v99F00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.557 484 535 3.30.70.120
2p8jB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.5411 475 538 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A4Y3TR09-F1-model_v4 UDP-phosphomannose--protein mannosyltransferase 0.8721 66 536 GO:0005886
GO:0009103
GO:0016763
AF-A0A4Y3TR09-F1-model_v4 UDP-phosphomannose--protein mannosyltransferase 0.8632 66 536 GO:0005886
GO:0009103
GO:0016763
AF-A0A2S5TZ75-F1-model_v4 deleted 0.825 7 538
AF-A0A2S5TZ75-F1-model_v4 deleted 0.8205 7 538
AF-F2IVW2-F1-model_v4 Putative 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family 0.8176 23 532 GO:0005886
GO:0009103
GO:0016763

Map