F397089

General Info

Members Datasets Scaffolds Average Seq Length
303 145 606 486

Family's Representative Sequence

Representative Sequence 3300028558|Ga0265326_10001413|Ga0265326_100014135
Length 515
Sequence MTSATLHRDPSSGGLSIKCLLDVLESFQPVLDGSADARILGVQQDSRRIEPGDLFVARSGASANGRQFIEAAIDNGAAAVLVDSDSGELSPLSVPLIYVSEARRALAFAAEAVHGYPSKQLGLVGITGTNGKTTTVALVERGLSVAGARPARLGTTGFAFGGVEQESNLTTPEADQITRLIAQVVGQGGTHFIMEASSHALDQGRVDALHFEVAAFSNLTQDHLDHHGSMAAYEAAKLRLFTNLGPTKAVINVDDPAGQRFAQISRAQQLVRVGRMPHCNVQPLDVTLNAQGMSGEIRVEDIRVHLHTRLVGEHNLENILLALGVLHALGADLQSAVRAFAGDFGVPGRLERCDRSDDDIVVLVDYAHTPDALERALQAVKRFAKGSVHCVFGCGGDRDPKKRPLMGQAVGKWADRATVTNDNPRTESPDLIALAIEPGLRQTDIHYSVELDRAVAIRAAILEAKAGDVVVIAGKGHETYQIVGTVKRPFDDRAQAREALSVRRRDDSGRERACR

Samples

Sample ID Description Type Environment
1 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
55 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
74 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
90 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
91 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
92 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
93 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
94 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
95 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
96 3300049132 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300049133 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
100 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
101 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
102 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
103 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
104 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
105 3300049546 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_B_4_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
106 3300049548 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
107 3300049550 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
108 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
109 3300049552 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
110 3300049554 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_A_7_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
111 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
113 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
114 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
115 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
116 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
117 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
118 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
119 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
120 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
121 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
122 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
123 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
125 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
126 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
127 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
128 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
129 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
130 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
131 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
132 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
133 2738541295 Bacillus sp. OK085 Isolate Unclassified
134 2738543017 Bacillus sp. OV186 Isolate Unclassified
135 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
136 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
137 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
138 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
139 2857586860 Bacillus sp. R-71935 Isolate Unclassified
140 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
141 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
142 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
143 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
144 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
145 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.45
Metatranscriptomes 6.93
Isolates 4.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.3
Nodule 0
Rhizoplane 0.33
Rhizosphere 92.08
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265326_10001413 3300028558 Bacteria 8451
2 JGI25151J46595_10001578 3300003187 Bacteria 15179
3 JGI25406J46586_10025655 3300003203 Bacteria 2285
4 rootL2_10070266 3300003322 Bacteria 5086
5 Ga0055532_1000004 3300003758 Bacteria 471824
6 Ga0068869_100000597 3300005334 Bacteria 20289
7 Ga0068869_100080340 3300005334 Bacteria 2432
8 Ga0070680_100063866 3300005336 Bacteria 3017
9 Ga0070661_100037324 3300005344 Bacteria 3534
10 Ga0070669_100059813 3300005353 Bacteria 2798
11 Ga0070667_100073262 3300005367 Bacteria 2920
12 Ga0070703_10005850 3300005406 Bacteria 3446
13 Ga0070709_10000367 3300005434 Bacteria 27727
14 Ga0070711_100000810 3300005439 Bacteria 16376
15 Ga0070705_100005086 3300005440 Bacteria 6398
16 Ga0070705_100024867 3300005440 Bacteria 3238
17 Ga0070700_100014963 3300005441 Bacteria 4389
18 Ga0070694_100001139 3300005444 Bacteria 15235
19 Ga0070694_100002942 3300005444 Bacteria 10124
20 Ga0070694_100006653 3300005444 Bacteria 7021
21 Ga0070694_100009829 3300005444 Bacteria 5878
22 Ga0070708_100018282 3300005445 Bacteria 5865
23 Ga0070708_100045726 3300005445 Bacteria 3859
24 Ga0070708_100112954 3300005445 Bacteria 2498
25 Ga0070662_100015231 3300005457 Bacteria 5146
26 Ga0070706_100002460 3300005467 Bacteria 18675
27 Ga0070706_100017138 3300005467 Bacteria 6693
28 Ga0070706_100021148 3300005467 Bacteria 5991
29 Ga0070707_100000645 3300005468 Bacteria 34839
30 Ga0070707_100002048 3300005468 Bacteria 19307
31 Ga0070707_100004567 3300005468 Bacteria 12961
32 Ga0070707_100009042 3300005468 Bacteria 9239
33 Ga0070707_100032806 3300005468 Bacteria 4947
34 Ga0070707_100053442 3300005468 Bacteria 3873
35 Ga0070707_100066350 3300005468 Bacteria 3468
36 Ga0070698_100010709 3300005471 Bacteria 9765
37 Ga0070698_100017859 3300005471 Bacteria 7473
38 Ga0070698_100040542 3300005471 Bacteria 4785
39 Ga0070698_100055294 3300005471 Bacteria 4026
40 Ga0070698_100058963 3300005471 Bacteria 3879
41 Ga0070699_100002466 3300005518 Bacteria 16639
42 Ga0070699_100008240 3300005518 Bacteria 9040
43 Ga0070699_100014268 3300005518 Bacteria 6832
44 Ga0070699_100019243 3300005518 Bacteria 5876
45 Ga0070699_100040406 3300005518 Bacteria 4039
46 Ga0070699_100054544 3300005518 Bacteria 3460
47 Ga0070699_100058935 3300005518 Bacteria 3326
48 Ga0070697_100003324 3300005536 Bacteria 12352
49 Ga0070697_100006928 3300005536 Bacteria 8812
50 Ga0070697_100016789 3300005536 Bacteria 5758
51 Ga0070697_100029562 3300005536 Bacteria 4394
52 Ga0070697_100105861 3300005536 Bacteria 2340
53 Ga0070695_100004838 3300005545 Bacteria 7929
54 Ga0070695_100018403 3300005545 Bacteria 4243
55 Ga0070695_100024646 3300005545 Bacteria 3709
56 Ga0070695_100028740 3300005545 Bacteria 3451
57 Ga0070695_100038138 3300005545 Bacteria 3030
58 Ga0070696_100000168 3300005546 Bacteria 37235
59 Ga0070696_100005344 3300005546 Bacteria 8565
60 Ga0070696_100008151 3300005546 Bacteria 7009
61 Ga0070696_100049319 3300005546 Bacteria 2924
62 Ga0070696_100060162 3300005546 Bacteria 2656
63 Ga0070693_100029435 3300005547 Bacteria 2996
64 Ga0070704_100000075 3300005549 Bacteria 33854
65 Ga0070704_100003725 3300005549 Bacteria 8785
66 Ga0070704_100021112 3300005549 Bacteria 4216
67 Ga0070704_100044833 3300005549 Bacteria 3075
68 Ga0070704_100086013 3300005549 Bacteria 2328
69 Ga0068859_100248231 3300005617 Bacteria 1870
70 Ga0068859_100281395 3300005617 Bacteria 1756
71 Ga0068864_100087568 3300005618 Bacteria 2742
72 Ga0068860_100037522 3300005843 Bacteria 4639
73 Ga0068862_100015163 3300005844 Bacteria 6400
74 Ga0068862_100017276 3300005844 Bacteria 6006
75 Ga0081539_10001199 3300005985 Bacteria 46742
76 Ga0075428_100000620 3300006844 Bacteria 36286
77 Ga0075428_100015464 3300006844 Bacteria 8461
78 Ga0075428_100022633 3300006844 Bacteria 6957
79 Ga0075428_100043625 3300006844 Bacteria 4931
80 Ga0075431_100002113 3300006847 Bacteria 18986
81 Ga0075431_100027610 3300006847 Bacteria 5825
82 Ga0075431_100033811 3300006847 Bacteria 5267
83 Ga0075431_100133518 3300006847 Bacteria 2559
84 Ga0075433_10000107 3300006852 Bacteria 41007
85 Ga0075433_10002210 3300006852 Bacteria 14753
86 Ga0075433_10003862 3300006852 Bacteria 11600
87 Ga0075433_10014425 3300006852 Bacteria 6454
88 Ga0075433_10015999 3300006852 Bacteria 6170
89 Ga0075433_10069772 3300006852 Bacteria 3087
90 Ga0075434_100001606 3300006871 Bacteria 19191
91 Ga0075434_100006897 3300006871 Bacteria 10464
92 Ga0075434_100017941 3300006871 Bacteria 6828
93 Ga0075434_100031733 3300006871 Bacteria 5209
94 Ga0075434_100041207 3300006871 Bacteria 4574
95 Ga0075434_100048582 3300006871 Bacteria 4210
96 Ga0075434_100073397 3300006871 Bacteria 3414
97 Ga0075429_100000580 3300006880 Bacteria 28130
98 Ga0075429_100001899 3300006880 Bacteria 17309
99 Ga0075429_100003751 3300006880 Bacteria 12956
100 Ga0075429_100012178 3300006880 Bacteria 7456
101 Ga0075429_100014713 3300006880 Bacteria 6782
102 Ga0075429_100074358 3300006880 Bacteria 2960
103 Ga0075429_100103424 3300006880 Bacteria 2487
104 Ga0075436_100000310 3300006914 Bacteria 31184
105 Ga0075436_100001281 3300006914 Bacteria 17072
106 Ga0075436_100014049 3300006914 Bacteria 5481
107 Ga0075436_100038716 3300006914 Bacteria 3291
108 Ga0075436_100041472 3300006914 Bacteria 3176
109 Ga0097620_100248240 3300006931 Bacteria 1870
110 Ga0097620_100281386 3300006931 Bacteria 1756
111 Ga0075435_100000015 3300007076 Bacteria 100708
112 Ga0075435_100006027 3300007076 Bacteria 8537
113 Ga0075435_100037897 3300007076 Bacteria 3842
114 Ga0075435_100038883 3300007076 Bacteria 3795
115 Ga0075435_100052956 3300007076 Bacteria 3271
116 Ga0075435_100057345 3300007076 Bacteria 3150
117 Ga0075435_100059775 3300007076 Bacteria 3089
118 Ga0099794_10000846 3300007265 Bacteria 10355
119 Ga0099794_10010031 3300007265 Bacteria 4011
120 Ga0099794_10023281 3300007265 Bacteria 2831
121 Ga0105240_10215865 3300009093 Bacteria 2238
122 Ga0111539_10000318 3300009094 Bacteria 58792
123 Ga0111539_10201010 3300009094 Bacteria 2324
124 Ga0105247_10089651 3300009101 Bacteria 1950
125 Ga0114129_10000109 3300009147 Bacteria 81939
126 Ga0114129_10005728 3300009147 Bacteria 17602
127 Ga0114129_10019349 3300009147 Bacteria 9697
128 Ga0114129_10047520 3300009147 Bacteria 6030
129 Ga0114129_10065659 3300009147 Bacteria 5064
130 Ga0114129_10066004 3300009147 Bacteria 5048
131 Ga0105243_10017751 3300009148 Bacteria 5383
132 Ga0105243_10073135 3300009148 Bacteria 2777
133 Ga0105241_10000209 3300009174 Bacteria 43970
134 Ga0105242_10145460 3300009176 Bacteria 2062
135 Ga0157373_10063135 3300013100 Bacteria 2623
136 Ga0163162_10004254 3300013306 Bacteria 13771
137 Ga0163162_10088755 3300013306 Bacteria 3171
138 Ga0157375_10008877 3300013308 Bacteria 8796
139 Ga0209147_100010 3300025229 Bacteria 741391
140 Ga0209455_1000278 3300025272 Bacteria 56010
141 Ga0209130_1010592 3300025284 Bacteria 2526
142 Ga0209676_1000561 3300025292 Bacteria 56143
143 Ga0209025_1000673 3300025294 Bacteria 58896
144 Ga0209025_1001163 3300025294 Bacteria 37269
145 Ga0209025_1002520 3300025294 Bacteria 19169
146 Ga0209025_1003981 3300025294 Bacteria 13264
147 Ga0207653_10002535 3300025885 Bacteria 5800
148 Ga0207653_10007269 3300025885 Bacteria 3454
149 Ga0207710_10055874 3300025900 Bacteria 1780
150 Ga0207684_10000508 3300025910 Bacteria 48513
151 Ga0207684_10000866 3300025910 Bacteria 34575
152 Ga0207684_10010730 3300025910 Bacteria 8043
153 Ga0207684_10011766 3300025910 Bacteria 7633
154 Ga0207684_10015583 3300025910 Bacteria 6541
155 Ga0207684_10021146 3300025910 Bacteria 5555
156 Ga0207663_10000085 3300025916 Bacteria 44183
157 Ga0207646_10001790 3300025922 Bacteria 26010
158 Ga0207646_10002033 3300025922 Bacteria 24299
159 Ga0207646_10010995 3300025922 Bacteria 8791
160 Ga0207646_10011683 3300025922 Bacteria 8489
161 Ga0207646_10032347 3300025922 Bacteria 4734
162 Ga0207646_10046401 3300025922 Bacteria 3898
163 Ga0207706_10031664 3300025933 Bacteria 4711
164 Ga0207686_10081365 3300025934 Bacteria 2114
165 Ga0207709_10028478 3300025935 Bacteria 3230
166 Ga0207689_10004704 3300025942 Bacteria 12322
167 Ga0207689_10118121 3300025942 Bacteria 2181
168 Ga0207712_10174414 3300025961 Bacteria 1683
169 Ga0207708_10012022 3300026075 Bacteria 6449
170 Ga0207676_10078927 3300026095 Bacteria 2668
171 Ga0209588_1014010 3300027671 Bacteria 2452
172 Ga0207428_10014202 3300027907 Bacteria 6929
173 Ga0268265_10057620 3300028380 Bacteria 2962
174 Ga0268264_10123697 3300028381 Bacteria 2283
175 Ga0265338_10084705 3300028800 Bacteria 2645
176 Ga0265340_10002689 3300031247 Bacteria 10109
177 Ga0307408_100014384 3300031548 Bacteria 5257
178 Ga0307410_10032978 3300031852 Bacteria 3340
179 Ga0307410_10043517 3300031852 Bacteria 2976
180 Ga0307406_10003372 3300031901 Bacteria 8709
181 Ga0307406_10016354 3300031901 Bacteria 4311
182 Ga0307412_10021988 3300031911 Bacteria 3904
183 Ga0307409_100003453 3300031995 Bacteria 8582
184 Ga0307409_100047284 3300031995 Bacteria 3264
185 Ga0307416_100165542 3300032002 Bacteria 2050
186 Ga0307414_10030883 3300032004 Bacteria 3506
187 Ga0307411_10012603 3300032005 Bacteria 4623
188 Ga0307411_10014543 3300032005 Bacteria 4384
189 Ga0307411_10093430 3300032005 Bacteria 2106
190 Ga0373931_0002435 3300035691 Bacteria 8240
191 Ga0373931_0033169 3300035691 Bacteria 2675
192 Ga0395900_0092801 3300037418 Bacteria 3102
193 Ga0395905_0092454 3300037471 Bacteria 2837
194 Ga0436364_0818633 3300037853 Bacteria 2121
195 Ga0395901_0228451 3300038443 Bacteria 1943
196 Ga0451577_0005061 3300042876 Bacteria 13611
197 Ga0453683_0045191 3300044673 Bacteria 2762
198 Ga0453684_0147947 3300044712 Bacteria 2795
199 Ga0451576_0038949 3300045051 Bacteria 5031
200 Ga0451576_0069568 3300045051 Bacteria 3663
201 Ga0495580_0000604 3300046472 Bacteria 30332
202 Ga0495667_0006782 3300046559 Bacteria 7769
203 Ga0495669_0004248 3300046684 Bacteria 5902
204 Ga0496126_0144613 3300048929 Bacteria 2043
205 Ga0501343_000029 3300049132 Bacteria 5607
206 Ga0501344_00328 3300049133 Bacteria 1887
207 Ga0501305_001840 3300049161 Bacteria 2171
208 Ga0501312_000191 3300049528 Bacteria 4156
209 Ga0501315_001475 3300049531 Bacteria 2029
210 Ga0501316_000054 3300049532 Bacteria 5050
211 Ga0501316_000095 3300049532 Bacteria 4350
212 Ga0501316_001571 3300049532 Bacteria 1969
213 Ga0501317_000298 3300049533 Bacteria 3234
214 Ga0501317_000393 3300049533 Bacteria 2973
215 Ga0501317_001887 3300049533 Bacteria 1895
216 Ga0501318_000314 3300049534 Bacteria 2855
217 Ga0501318_000395 3300049534 Bacteria 2700
218 Ga0501321_000684 3300049537 Bacteria 2332
219 Ga0501330_000109 3300049546 Bacteria 2619
220 Ga0501330_000308 3300049546 Bacteria 1930
221 Ga0501332_00039 3300049548 Bacteria 3602
222 Ga0501334_00038 3300049550 Bacteria 3981
223 Ga0501335_000011 3300049551 Bacteria 8508
224 Ga0501336_000037 3300049552 Bacteria 4248
225 Ga0501338_00063 3300049554 Bacteria 3159
226 Ga0501036_0004351 3300049572 Bacteria 11427
227 Ga0501076_0055930 3300049592 Bacteria 3130
228 Ga0501077_0024974 3300049593 Bacteria 3794
229 Ga0501202_002701 3300049652 Bacteria 2996
230 Ga0501235_000460 3300049669 Bacteria 7987
231 Ga0501240_006899 3300049673 Bacteria 1411
232 Ga0501249_014595 3300049679 Bacteria 1675
233 Ga0501225_0001893 3300049705 Bacteria 6579
234 Ga0501079_0155709 3300049741 Bacteria 1781
235 nmdc:mga05p37_10465_c1 3300050507 Bacteria 11008
236 nmdc:mga05p37_1693_c1 3300050507 Bacteria 25677
237 nmdc:mga05p37_1952_c1 3300050507 Bacteria 24046
238 nmdc:mga05p37_38019_c1 3300050507 Bacteria 5903
239 nmdc:mga05p37_41705_c1 3300050507 Bacteria 5636
240 nmdc:mga05p37_44124_c1 3300050507 Bacteria 5486
241 nmdc:mga05p37_7013_c1 3300050507 Bacteria 13281
242 nmdc:mga05p37_91975_c1 3300050507 Bacteria 3738
243 nmdc:mga09592_13935_c1 3300050508 Bacteria 6566
244 nmdc:mga09592_1654_c1 3300050508 Bacteria 17927
245 nmdc:mga09592_2549_c1 3300050508 Bacteria 14744
246 nmdc:mga09592_25594_c1 3300050508 Bacteria 4885
247 nmdc:mga09592_25809_c1 3300050508 Bacteria 4866
248 nmdc:mga09592_57688_c1 3300050508 Bacteria 3282
249 nmdc:mga09592_6449_c1 3300050508 Bacteria 9557
250 nmdc:mga09592_64973_c1 3300050508 Bacteria 3090
251 nmdc:mga0qj67_12218_c1 3300050509 Bacteria 6464
252 nmdc:mga0qj67_40237_c1 3300050509 Bacteria 3674
253 nmdc:mga06r32_132462_c1 3300050510 Bacteria 2466
254 nmdc:mga06r32_15143_c1 3300050510 Bacteria 7003
255 nmdc:mga06r32_16392_c1 3300050510 Bacteria 6751
256 nmdc:mga06r32_80729_c1 3300050510 Bacteria 3166
257 nmdc:mga06r32_82632_c1 3300050510 Bacteria 3129
258 nmdc:mga08y16_26787_c1 3300050511 Bacteria 6075
259 nmdc:mga0n895_25726_c1 3300050512 Bacteria 5566
260 nmdc:mga0n895_26784_c1 3300050512 Bacteria 5467
261 nmdc:mga0n895_301_c1 3300050512 Bacteria 32672
262 nmdc:mga0n895_40893_c1 3300050512 Bacteria 4505
263 nmdc:mga0n895_53261_c1 3300050512 Bacteria 3976
264 nmdc:mga0n895_8650_c1 3300050512 Bacteria 8835
265 nmdc:mga0n895_89347_c1 3300050512 Bacteria 3082
266 nmdc:mga0rr50_15380_c1 3300050513 Bacteria 5049
267 nmdc:mga0rr50_1639_c1 3300050513 Bacteria 12322
268 nmdc:mga0rr50_19401_c1 3300050513 Bacteria 4589
269 nmdc:mga0rr50_2074_c1 3300050513 Bacteria 11193
270 nmdc:mga0rr50_32676_c1 3300050513 Bacteria 3710
271 nmdc:mga0rr50_44572_c1 3300050513 Bacteria 3254
272 nmdc:mga0rr50_516_c1 3300050513 Bacteria 20650
273 nmdc:mga08x19_1345_c1 3300050514 Bacteria 15261
274 nmdc:mga08x19_1656_c1 3300050514 Bacteria 13744
275 nmdc:mga08x19_20594_c1 3300050514 Bacteria 4062
276 nmdc:mga08x19_3546_c1 3300050514 Bacteria 9283
277 nmdc:mga08x19_37529_c1 3300050514 Bacteria 3075
278 nmdc:mga08x19_98294_c1 3300050514 Bacteria 1939
279 nmdc:mga0a205_142396_c1 3300050515 Bacteria 2298
280 nmdc:mga0a205_180_c1 3300050515 Bacteria 42950
281 nmdc:mga0a205_2344_c1 3300050515 Bacteria 16708
282 nmdc:mga0a205_250016_c1 3300050515 Bacteria 1653
283 nmdc:mga0a205_4596_c1 3300050515 Bacteria 12377
284 nmdc:mga0a205_9316_c1 3300050515 Bacteria 8967
285 Ga0501084_0051823 3300054114 Bacteria 3435
286 Ga0501084_0058944 3300054114 Bacteria 3213
287 Ga0501084_0088083 3300054114 Bacteria 2606
288 Ga0501082_0028664 3300060353 Bacteria 4796
289 Ga0530510_0037572 3300061734 Bacteria 3494
290 2595089091 2593339131 Bacteria 5116855
291 2738812822 2738541295 Bacteria 5730091
292 2739268677 2738543017 Bacteria 4271950
293 2757564835 2757320391 Bacteria 4746095
294 2777763055 2775507177 Bacteria 4384303
295 2777839069 2775507192 Bacteria 4622234
296 2808868448 2808606364 Bacteria 4465927
297 2857587625 2857586860 Bacteria 4354574
298 2936343975 2936340661 Bacteria 5139038
299 2936365173 2936361878 Bacteria 5632809
300 2956901436 2956897341 Bacteria 5447711
301 2990279444 2990275345 Bacteria 4887158
302 3001893588 3001892409 Bacteria 6328293
303 3006830985 3006826541 Bacteria 4678913
304 Ga0265326_10001413
305 JGI25151J46595_10001578
306 JGI25406J46586_10025655
307 rootL2_10070266
308 Ga0055532_1000004
309 Ga0068869_100000597
310 Ga0068869_100080340
311 Ga0070680_100063866
312 Ga0070661_100037324
313 Ga0070669_100059813
314 Ga0070667_100073262
315 Ga0070703_10005850
316 Ga0070709_10000367
317 Ga0070711_100000810
318 Ga0070705_100005086
319 Ga0070705_100024867
320 Ga0070700_100014963
321 Ga0070694_100001139
322 Ga0070694_100002942
323 Ga0070694_100006653
324 Ga0070694_100009829
325 Ga0070708_100018282
326 Ga0070708_100045726
327 Ga0070708_100112954
328 Ga0070662_100015231
329 Ga0070706_100002460
330 Ga0070706_100017138
331 Ga0070706_100021148
332 Ga0070707_100000645
333 Ga0070707_100002048
334 Ga0070707_100004567
335 Ga0070707_100009042
336 Ga0070707_100032806
337 Ga0070707_100053442
338 Ga0070707_100066350
339 Ga0070698_100010709
340 Ga0070698_100017859
341 Ga0070698_100040542
342 Ga0070698_100055294
343 Ga0070698_100058963
344 Ga0070699_100002466
345 Ga0070699_100008240
346 Ga0070699_100014268
347 Ga0070699_100019243
348 Ga0070699_100040406
349 Ga0070699_100054544
350 Ga0070699_100058935
351 Ga0070697_100003324
352 Ga0070697_100006928
353 Ga0070697_100016789
354 Ga0070697_100029562
355 Ga0070697_100105861
356 Ga0070695_100004838
357 Ga0070695_100018403
358 Ga0070695_100024646
359 Ga0070695_100028740
360 Ga0070695_100038138
361 Ga0070696_100000168
362 Ga0070696_100005344
363 Ga0070696_100008151
364 Ga0070696_100049319
365 Ga0070696_100060162
366 Ga0070693_100029435
367 Ga0070704_100000075
368 Ga0070704_100003725
369 Ga0070704_100021112
370 Ga0070704_100044833
371 Ga0070704_100086013
372 Ga0068859_100248231
373 Ga0068859_100281395
374 Ga0068864_100087568
375 Ga0068860_100037522
376 Ga0068862_100015163
377 Ga0068862_100017276
378 Ga0081539_10001199
379 Ga0075428_100000620
380 Ga0075428_100015464
381 Ga0075428_100022633
382 Ga0075428_100043625
383 Ga0075431_100002113
384 Ga0075431_100027610
385 Ga0075431_100033811
386 Ga0075431_100133518
387 Ga0075433_10000107
388 Ga0075433_10002210
389 Ga0075433_10003862
390 Ga0075433_10014425
391 Ga0075433_10015999
392 Ga0075433_10069772
393 Ga0075434_100001606
394 Ga0075434_100006897
395 Ga0075434_100017941
396 Ga0075434_100031733
397 Ga0075434_100041207
398 Ga0075434_100048582
399 Ga0075434_100073397
400 Ga0075429_100000580
401 Ga0075429_100001899
402 Ga0075429_100003751
403 Ga0075429_100012178
404 Ga0075429_100014713
405 Ga0075429_100074358
406 Ga0075429_100103424
407 Ga0075436_100000310
408 Ga0075436_100001281
409 Ga0075436_100014049
410 Ga0075436_100038716
411 Ga0075436_100041472
412 Ga0097620_100248240
413 Ga0097620_100281386
414 Ga0075435_100000015
415 Ga0075435_100006027
416 Ga0075435_100037897
417 Ga0075435_100038883
418 Ga0075435_100052956
419 Ga0075435_100057345
420 Ga0075435_100059775
421 Ga0099794_10000846
422 Ga0099794_10010031
423 Ga0099794_10023281
424 Ga0105240_10215865
425 Ga0111539_10000318
426 Ga0111539_10201010
427 Ga0105247_10089651
428 Ga0114129_10000109
429 Ga0114129_10005728
430 Ga0114129_10019349
431 Ga0114129_10047520
432 Ga0114129_10065659
433 Ga0114129_10066004
434 Ga0105243_10017751
435 Ga0105243_10073135
436 Ga0105241_10000209
437 Ga0105242_10145460
438 Ga0157373_10063135
439 Ga0163162_10004254
440 Ga0163162_10088755
441 Ga0157375_10008877
442 Ga0209147_100010
443 Ga0209455_1000278
444 Ga0209130_1010592
445 Ga0209676_1000561
446 Ga0209025_1000673
447 Ga0209025_1001163
448 Ga0209025_1002520
449 Ga0209025_1003981
450 Ga0207653_10002535
451 Ga0207653_10007269
452 Ga0207710_10055874
453 Ga0207684_10000508
454 Ga0207684_10000866
455 Ga0207684_10010730
456 Ga0207684_10011766
457 Ga0207684_10015583
458 Ga0207684_10021146
459 Ga0207663_10000085
460 Ga0207646_10001790
461 Ga0207646_10002033
462 Ga0207646_10010995
463 Ga0207646_10011683
464 Ga0207646_10032347
465 Ga0207646_10046401
466 Ga0207706_10031664
467 Ga0207686_10081365
468 Ga0207709_10028478
469 Ga0207689_10004704
470 Ga0207689_10118121
471 Ga0207712_10174414
472 Ga0207708_10012022
473 Ga0207676_10078927
474 Ga0209588_1014010
475 Ga0207428_10014202
476 Ga0268265_10057620
477 Ga0268264_10123697
478 Ga0265338_10084705
479 Ga0265340_10002689
480 Ga0307408_100014384
481 Ga0307410_10032978
482 Ga0307410_10043517
483 Ga0307406_10003372
484 Ga0307406_10016354
485 Ga0307412_10021988
486 Ga0307409_100003453
487 Ga0307409_100047284
488 Ga0307416_100165542
489 Ga0307414_10030883
490 Ga0307411_10012603
491 Ga0307411_10014543
492 Ga0307411_10093430
493 Ga0373931_0002435
494 Ga0373931_0033169
495 Ga0395900_0092801
496 Ga0395905_0092454
497 Ga0436364_0818633
498 Ga0395901_0228451
499 Ga0451577_0005061
500 Ga0453683_0045191
501 Ga0453684_0147947
502 Ga0451576_0038949
503 Ga0451576_0069568
504 Ga0495580_0000604
505 Ga0495667_0006782
506 Ga0495669_0004248
507 Ga0496126_0144613
508 Ga0501343_000029
509 Ga0501344_00328
510 Ga0501305_001840
511 Ga0501312_000191
512 Ga0501315_001475
513 Ga0501316_000054
514 Ga0501316_000095
515 Ga0501316_001571
516 Ga0501317_000298
517 Ga0501317_000393
518 Ga0501317_001887
519 Ga0501318_000314
520 Ga0501318_000395
521 Ga0501321_000684
522 Ga0501330_000109
523 Ga0501330_000308
524 Ga0501332_00039
525 Ga0501334_00038
526 Ga0501335_000011
527 Ga0501336_000037
528 Ga0501338_00063
529 Ga0501036_0004351
530 Ga0501076_0055930
531 Ga0501077_0024974
532 Ga0501202_002701
533 Ga0501235_000460
534 Ga0501240_006899
535 Ga0501249_014595
536 Ga0501225_0001893
537 Ga0501079_0155709
538 nmdc:mga05p37_10465_c1
539 nmdc:mga05p37_1693_c1
540 nmdc:mga05p37_1952_c1
541 nmdc:mga05p37_38019_c1
542 nmdc:mga05p37_41705_c1
543 nmdc:mga05p37_44124_c1
544 nmdc:mga05p37_7013_c1
545 nmdc:mga05p37_91975_c1
546 nmdc:mga09592_13935_c1
547 nmdc:mga09592_1654_c1
548 nmdc:mga09592_2549_c1
549 nmdc:mga09592_25594_c1
550 nmdc:mga09592_25809_c1
551 nmdc:mga09592_57688_c1
552 nmdc:mga09592_6449_c1
553 nmdc:mga09592_64973_c1
554 nmdc:mga0qj67_12218_c1
555 nmdc:mga0qj67_40237_c1
556 nmdc:mga06r32_132462_c1
557 nmdc:mga06r32_15143_c1
558 nmdc:mga06r32_16392_c1
559 nmdc:mga06r32_80729_c1
560 nmdc:mga06r32_82632_c1
561 nmdc:mga08y16_26787_c1
562 nmdc:mga0n895_25726_c1
563 nmdc:mga0n895_26784_c1
564 nmdc:mga0n895_301_c1
565 nmdc:mga0n895_40893_c1
566 nmdc:mga0n895_53261_c1
567 nmdc:mga0n895_8650_c1
568 nmdc:mga0n895_89347_c1
569 nmdc:mga0rr50_15380_c1
570 nmdc:mga0rr50_1639_c1
571 nmdc:mga0rr50_19401_c1
572 nmdc:mga0rr50_2074_c1
573 nmdc:mga0rr50_32676_c1
574 nmdc:mga0rr50_44572_c1
575 nmdc:mga0rr50_516_c1
576 nmdc:mga08x19_1345_c1
577 nmdc:mga08x19_1656_c1
578 nmdc:mga08x19_20594_c1
579 nmdc:mga08x19_3546_c1
580 nmdc:mga08x19_37529_c1
581 nmdc:mga08x19_98294_c1
582 nmdc:mga0a205_142396_c1
583 nmdc:mga0a205_180_c1
584 nmdc:mga0a205_2344_c1
585 nmdc:mga0a205_250016_c1
586 nmdc:mga0a205_4596_c1
587 nmdc:mga0a205_9316_c1
588 Ga0501084_0051823
589 Ga0501084_0058944
590 Ga0501084_0088083
591 Ga0501082_0028664
592 Ga0530510_0037572
593 2595089091
594 2738812822
595 2739268677
596 2757564835
597 2777763055
598 2777839069
599 2808868448
600 2857587625
601 2936343975
602 2936365173
603 2956901436
604 2990279444
605 3001893588
606 3006830985

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08245

Mur_ligase_M

Mur ligase middle domain

126

326

0.94

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

348

476

0.93

PF01225

Mur_ligase

Mur ligase family, catalytic domain

38

114

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4c12-assembly1.cif.gz_A x-ray crystal structure of staphylococcus aureus mure with udp-murnac- ala-glu-lys and adp 0.9546 1 486
4c12-assembly1.cif.gz_A x-ray crystal structure of staphylococcus aureus mure with udp-murnac- ala-glu-lys and adp 0.9489 1 486
1e8c-assembly1.cif.gz_A structure of mure the udp-n-acetylmuramyl tripeptide synthetase from e. coli 0.9267 1 483
1e8c-assembly1.cif.gz_A structure of mure the udp-n-acetylmuramyl tripeptide synthetase from e. coli 0.9157 1 483
4bub-assembly1.cif.gz_A crystal structure of mure ligase from thermotoga maritima in complex with adp 0.9132 1 488
ID Description Score Start End Superfamily
af_I1KPB4_561_737_3.90.190.20 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9626 339 487 3.90.190.20
4c13A02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9624 97 335 3.40.1190.10
4c13A02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9545 97 335 3.40.1190.10
1e8cB03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.948 337 475 3.90.190.20
4c12A03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9415 337 486 3.90.190.20
ID Description Score Start End GO Terms
AF-A6CUJ1-F1-model_v4 deleted 0.9803 189 485
AF-A0A5R2MWL7-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9732 108 217 GO:0005524
GO:0009058
GO:0016881
AF-A0A3D1SS49-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9711 151 485 GO:0005524
GO:0005737
GO:0008360
GO:0009252
GO:0016881
GO:0051301
GO:0071555
AF-A0A6A2FIN2-F1-model_v4 deleted 0.971 1 487
AF-A0A353V4A8-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9709 101 486 GO:0005524
GO:0005737
GO:0008360
GO:0009252
GO:0016881
GO:0051301
GO:0071555

Map