F396612

General Info

Members Datasets Scaffolds Average Seq Length
302 185 604 210

Family's Representative Sequence

Representative Sequence 3300039438|Ga0436360_0952577|Ga0436360_0952577_363_1097
Length 244
Sequence MHRGAQPGLGERRRVGARVDRGARAGGGVDRKRRTMSRYEYVRDGAAIYARSFAAIRAEADLSAFPSAEARIVVRVIHACGMVEVARDVRFSPGFAERARHALLDGRPVLCDSKMVAHGITRARLPAANEVVCALDAPEVPALAARLGTTRSAAALDLWGARLDGALVAVGNAPTALFRLLELLDAGAPLPAAVIGMPVGFVGAAEAKAALAADGRVPFAIVRGRKGGSAMAAAAVNALASEAE

Samples

Sample ID Description Type Environment
1 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
2 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
38 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
39 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
40 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
41 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
42 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
43 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
45 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
67 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
68 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
69 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
70 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
71 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
72 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
73 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
74 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
75 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
76 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
77 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
78 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
79 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
80 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
81 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
82 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
83 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
84 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
85 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
86 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
87 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
88 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
89 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
91 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
94 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
95 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
96 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
97 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
98 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
99 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
100 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
101 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
102 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
103 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
104 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
105 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
106 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
107 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
108 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
109 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
110 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
111 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
112 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
113 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
114 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
115 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
116 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
117 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
121 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
122 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
123 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
124 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
125 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
126 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
127 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
128 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
133 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
134 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
135 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
136 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
137 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
138 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
139 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
153 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
154 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
155 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
156 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
157 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
158 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
159 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
160 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
161 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
162 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
163 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
164 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
165 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
168 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
169 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
170 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
173 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
174 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
175 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
176 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
177 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
178 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
179 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
180 3300053725 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere Metagenome Endosphere
181 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
182 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
183 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
184 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
185 2842775625 Roseomonas sp. R-71825 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.34
Metatranscriptomes 0
Isolates 0.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.97
Nodule 0
Rhizoplane 3.31
Rhizosphere 81.79
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436360_0952577 3300039438 Bacteria 1172
2 Ga0055539_1015534 3300003752 Bacteria 925
3 Ga0070658_10006731 3300005327 Bacteria 9312
4 Ga0070680_100011468 3300005336 Bacteria 6857
5 Ga0070680_100630313 3300005336 Bacteria 921
6 Ga0070691_10099280 3300005341 Bacteria 1444
7 Ga0070675_100816348 3300005354 Bacteria 853
8 Ga0070667_100493646 3300005367 Bacteria 1122
9 Ga0070714_100369751 3300005435 Bacteria 1350
10 Ga0070713_100417056 3300005436 Bacteria 1256
11 Ga0070713_100670348 3300005436 Bacteria 989
12 Ga0070711_100110747 3300005439 Bacteria 2015
13 Ga0070711_100131568 3300005439 Bacteria 1864
14 Ga0070681_10004161 3300005458 Bacteria 13694
15 Ga0070681_10717434 3300005458 Bacteria 916
16 Ga0070706_100212937 3300005467 Bacteria 1804
17 Ga0070707_100560739 3300005468 Bacteria 1104
18 Ga0070679_100005007 3300005530 Bacteria 12225
19 Ga0070672_100511913 3300005543 Bacteria 1039
20 Ga0070686_100745383 3300005544 Bacteria 785
21 Ga0070696_100082473 3300005546 Bacteria 2279
22 Ga0070665_100021208 3300005548 Bacteria 6531
23 Ga0068855_100716558 3300005563 Bacteria 1069
24 Ga0070664_100404815 3300005564 Bacteria 1248
25 Ga0068856_100844898 3300005614 Bacteria 935
26 Ga0068858_100499854 3300005842 Bacteria 1175
27 Ga0068862_100590614 3300005844 Bacteria 1065
28 Ga0070717_10037613 3300006028 Bacteria 3930
29 Ga0075431_100119645 3300006847 Bacteria 2718
30 Ga0099795_10062271 3300007788 Bacteria 1388
31 Ga0105240_10028349 3300009093 Bacteria 7316
32 Ga0105240_10036779 3300009093 Bacteria 6295
33 Ga0105240_10260839 3300009093 Bacteria 1999
34 Ga0111539_10191704 3300009094 Bacteria 2385
35 Ga0111539_10962370 3300009094 Bacteria 993
36 Ga0105247_10107304 3300009101 Bacteria 1793
37 Ga0114129_10013661 3300009147 Bacteria 11570
38 Ga0114129_10063634 3300009147 Bacteria 5150
39 Ga0105241_10350514 3300009174 Bacteria 1282
40 Ga0105242_10985311 3300009176 Bacteria 849
41 Ga0105248_10544466 3300009177 Bacteria 1309
42 Ga0105238_10002503 3300009551 Bacteria 18383
43 Ga0105238_10174151 3300009551 Bacteria 2128
44 Ga0105238_10212227 3300009551 Bacteria 1912
45 Ga0105239_11398731 3300010375 Bacteria 808
46 Ga0163162_11845743 3300013306 Bacteria 691
47 Ga0157380_10362680 3300014326 Bacteria 1360
48 Ga0182008_10257726 3300014497 Bacteria 901
49 Ga0213874_10023222 3300021377 Bacteria 1728
50 Ga0213874_10024287 3300021377 Bacteria 1698
51 Ga0213876_10128586 3300021384 Bacteria 1346
52 Ga0213875_10008579 3300021388 Bacteria 5225
53 Ga0213871_10045279 3300021441 Bacteria 1192
54 Ga0213871_10120631 3300021441 Bacteria 781
55 Ga0209677_100846 3300025253 Bacteria 15138
56 Ga0209233_1010933 3300025261 Bacteria 2694
57 Ga0209455_1010100 3300025272 Bacteria 2426
58 Ga0209455_1016018 3300025272 Bacteria 1625
59 Ga0207705_10086006 3300025909 Bacteria 2297
60 Ga0207707_10080711 3300025912 Bacteria 2840
61 Ga0207707_10283023 3300025912 Bacteria 1436
62 Ga0207695_10018806 3300025913 Bacteria 7972
63 Ga0207695_10108666 3300025913 Bacteria 2757
64 Ga0207695_10150298 3300025913 Bacteria 2268
65 Ga0207695_10339762 3300025913 Bacteria 1389
66 Ga0207693_10048960 3300025915 Bacteria 3319
67 Ga0207663_10083662 3300025916 Bacteria 2097
68 Ga0207694_10007445 3300025924 Bacteria 8295
69 Ga0207694_10097604 3300025924 Bacteria 2325
70 Ga0207659_10637662 3300025926 Bacteria 910
71 Ga0207700_10022006 3300025928 Bacteria 4366
72 Ga0207664_10068026 3300025929 Bacteria 2860
73 Ga0207667_10205992 3300025949 Bacteria 2017
74 Ga0207667_10410199 3300025949 Bacteria 1379
75 Ga0207668_10889784 3300025972 Bacteria 792
76 Ga0207703_10069022 3300026035 Bacteria 2913
77 Ga0207708_10074415 3300026075 Bacteria 2603
78 Ga0207702_10348164 3300026078 Bacteria 1417
79 Ga0207641_10733089 3300026088 Bacteria 975
80 Ga0207648_10626361 3300026089 Bacteria 993
81 Ga0207675_100965187 3300026118 Bacteria 870
82 Ga0207683_10391436 3300026121 Bacteria 1278
83 Ga0268266_10053450 3300028379 Bacteria 3470
84 Ga0268264_10087298 3300028381 Bacteria 2682
85 Ga0265337_1005969 3300028556 Bacteria 4755
86 Ga0265326_10005877 3300028558 Bacteria 3850
87 Ga0265319_1000354 3300028563 Bacteria 33255
88 Ga0265334_10001600 3300028573 Bacteria 10889
89 Ga0265318_10061535 3300028577 Bacteria 1399
90 Ga0265323_10000264 3300028653 Bacteria 30779
91 Ga0265322_10006761 3300028654 Bacteria 3368
92 Ga0265336_10000291 3300028666 Bacteria 34334
93 Ga0265338_10000317 3300028800 Bacteria 87318
94 Ga0265324_10024868 3300029957 Bacteria 2125
95 Ga0265328_10000010 3300031239 Bacteria 163171
96 Ga0265328_10004225 3300031239 Bacteria 6249
97 Ga0265328_10006538 3300031239 Bacteria 4918
98 Ga0265328_10022467 3300031239 Bacteria 2400
99 Ga0265328_10075440 3300031239 Bacteria 1240
100 Ga0265331_10000075 3300031250 Bacteria 149131
101 Ga0265331_10150584 3300031250 Bacteria 1057
102 Ga0265331_10218060 3300031250 Bacteria 858
103 Ga0265327_10044137 3300031251 Bacteria 2379
104 Ga0265316_10168712 3300031344 Bacteria 1633
105 Ga0373936_0107943 3300035113 Bacteria 1180
106 Ga0373954_0123365 3300035118 Bacteria 1258
107 Ga0373955_0154517 3300035172 Bacteria 1351
108 Ga0373924_0012938 3300035410 Bacteria 3127
109 Ga0373924_0148940 3300035410 Bacteria 1023
110 Ga0373931_0066725 3300035691 Bacteria 1953
111 Ga0373935_0412332 3300035692 Bacteria 971
112 Ga0373933_0028674 3300035724 Bacteria 3213
113 Ga0373933_0080525 3300035724 Bacteria 1996
114 Ga0373933_0267572 3300035724 Bacteria 1103
115 Ga0373937_0005787 3300036401 Bacteria 10629
116 Ga0373937_0102318 3300036401 Bacteria 2659
117 Ga0316582_0093605 3300036647 Bacteria 1982
118 Ga0373925_0030241 3300037068 Bacteria 3975
119 Ga0373925_0218589 3300037068 Bacteria 1520
120 Ga0395900_0091660 3300037418 Bacteria 3123
121 Ga0436364_0604451 3300037853 Bacteria 1593
122 Ga0436364_0797754 3300037853 Bacteria 716
123 Ga0436364_0889568 3300037853 Bacteria 4480
124 Ga0395901_0330787 3300038443 Bacteria 1575
125 Ga0436365_0030974 3300039437 Bacteria 1420
126 Ga0436365_0075318 3300039437 Bacteria 2582
127 Ga0436365_0151977 3300039437 Bacteria 3444
128 Ga0436365_0379932 3300039437 Bacteria 1180
129 Ga0436365_0581518 3300039437 Bacteria 1640
130 Ga0436360_0312759 3300039438 Bacteria 1502
131 Ga0436360_0343018 3300039438 Bacteria 1480
132 Ga0436361_0780683 3300039447 Bacteria 1619
133 Ga0436361_0842899 3300039447 Bacteria 1543
134 Ga0436363_0138051 3300039450 Bacteria 836
135 Ga0436363_0557901 3300039450 Bacteria 1979
136 Ga0436363_0643256 3300039450 Bacteria 4430
137 Ga0436363_0913329 3300039450 Bacteria 825
138 Ga0436363_1107800 3300039450 Bacteria 3182
139 Ga0436363_1661610 3300039450 Bacteria 8409
140 Ga0466957_0332561 3300044842 Bacteria 1027
141 Ga0466957_0455079 3300044842 Bacteria 882
142 Ga0466959_0124468 3300045049 Bacteria 1831
143 Ga0451576_0013747 3300045051 Bacteria 9043
144 Ga0466967_0630399 3300045976 Bacteria 1059
145 Ga0495592_0004048 3300046454 Bacteria 10659
146 Ga0495651_0048080 3300046462 Bacteria 3295
147 Ga0495651_0057869 3300046462 Bacteria 2975
148 Ga0495651_0106678 3300046462 Bacteria 2076
149 Ga0495664_0122132 3300046477 Bacteria 1575
150 Ga0495664_0196719 3300046477 Bacteria 1222
151 Ga0495585_0114330 3300046492 Bacteria 1433
152 Ga0495608_0053517 3300046511 Bacteria 2671
153 Ga0495608_0371760 3300046511 Bacteria 877
154 Ga0495616_0184886 3300046513 Bacteria 924
155 Ga0495618_0112766 3300046514 Bacteria 1741
156 Ga0495652_0062711 3300046529 Bacteria 3133
157 Ga0495652_0132007 3300046529 Bacteria 1976
158 Ga0495640_0078556 3300046533 Bacteria 2198
159 Ga0495587_0067687 3300046536 Bacteria 2081
160 Ga0495587_0126108 3300046536 Bacteria 1464
161 Ga0495645_0117715 3300046543 Bacteria 1874
162 Ga0495645_0120772 3300046543 Bacteria 1845
163 Ga0495667_0069609 3300046559 Bacteria 2296
164 Ga0495667_0107060 3300046559 Bacteria 1807
165 Ga0495635_0071361 3300046663 Bacteria 2380
166 Ga0495657_0066812 3300046675 Bacteria 2361
167 Ga0495623_0090908 3300046679 Bacteria 1873
168 Ga0495646_0060787 3300046680 Bacteria 2252
169 Ga0495647_0299497 3300046681 Bacteria 725
170 Ga0495658_0293226 3300046683 Bacteria 1028
171 Ga0495613_0110997 3300046689 Bacteria 1976
172 Ga0495604_0081104 3300047317 Bacteria 2429
173 Ga0495604_0173895 3300047317 Bacteria 1512
174 Ga0495674_0066514 3300047319 Bacteria 3126
175 Ga0495674_0431348 3300047319 Bacteria 1061
176 Ga0495672_0023478 3300047320 Bacteria 3991
177 Ga0495680_0034718 3300047322 Bacteria 4069
178 Ga0495684_0269799 3300047471 Bacteria 1231
179 Ga0495602_0058732 3300048088 Bacteria 3365
180 Ga0495602_0423435 3300048088 Bacteria 945
181 Ga0496101_0265502 3300048904 Bacteria 1339
182 Ga0496102_0085990 3300048905 Bacteria 2904
183 Ga0496102_0304994 3300048905 Bacteria 1501
184 Ga0496102_0501865 3300048905 Bacteria 1135
185 Ga0496103_0078693 3300048906 Bacteria 2071
186 Ga0496103_0456765 3300048906 Bacteria 819
187 Ga0496107_0110111 3300048910 Bacteria 2023
188 Ga0496109_0808116 3300048912 Bacteria 876
189 Ga0496110_0823771 3300048913 Bacteria 833
190 Ga0496115_0730658 3300048918 Bacteria 776
191 Ga0496117_0154409 3300048920 Bacteria 1354
192 Ga0496118_0020570 3300048921 Bacteria 5847
193 Ga0496118_0143210 3300048921 Bacteria 1511
194 Ga0496118_0162567 3300048921 Bacteria 1378
195 Ga0496121_0036706 3300048924 Bacteria 4363
196 Ga0496121_0150316 3300048924 Bacteria 1714
197 Ga0496121_0188372 3300048924 Bacteria 1482
198 Ga0496122_0105042 3300048925 Bacteria 1875
199 Ga0496124_0052025 3300048927 Bacteria 3482
200 Ga0496125_0042774 3300048928 Bacteria 3853
201 Ga0496125_0196088 3300048928 Bacteria 1328
202 Ga0496126_0245551 3300048929 Bacteria 1493
203 Ga0496126_0621014 3300048929 Bacteria 849
204 Ga0501031_0114898 3300049568 Bacteria 1758
205 Ga0501031_0201420 3300049568 Bacteria 1299
206 Ga0501034_0000031 3300049571 Bacteria 244022
207 Ga0501034_0032184 3300049571 Bacteria 5328
208 Ga0501036_0009754 3300049572 Bacteria 7907
209 Ga0501036_0051043 3300049572 Bacteria 3502
210 Ga0501036_0084745 3300049572 Bacteria 2679
211 Ga0501036_0204994 3300049572 Bacteria 1658
212 Ga0501037_0001537 3300049573 Bacteria 16837
213 Ga0501038_0007327 3300049574 Bacteria 10177
214 Ga0501038_0103746 3300049574 Bacteria 2364
215 Ga0501039_0000388 3300049575 Bacteria 31653
216 Ga0501039_0034980 3300049575 Bacteria 3877
217 Ga0501040_0018842 3300049576 Bacteria 4586
218 Ga0501040_0037630 3300049576 Bacteria 3288
219 Ga0501040_0137116 3300049576 Bacteria 1723
220 Ga0501041_0018500 3300049577 Bacteria 4150
221 Ga0501042_0024107 3300049578 Bacteria 4265
222 Ga0501042_0041145 3300049578 Bacteria 3285
223 Ga0501042_0058666 3300049578 Bacteria 2748
224 Ga0501043_0053472 3300049579 Bacteria 3171
225 Ga0501043_0137654 3300049579 Bacteria 1913
226 Ga0501046_0009420 3300049580 Bacteria 8440
227 Ga0501046_0087981 3300049580 Bacteria 2393
228 Ga0501046_0092015 3300049580 Bacteria 2332
229 Ga0501046_0166216 3300049580 Bacteria 1658
230 Ga0501047_0000201 3300049581 Bacteria 72425
231 Ga0501047_0002957 3300049581 Bacteria 16104
232 Ga0501047_0060459 3300049581 Bacteria 3656
233 Ga0501047_0242036 3300049581 Bacteria 1655
234 Ga0501048_0000736 3300049582 Bacteria 23987
235 Ga0501048_0101639 3300049582 Bacteria 2028
236 Ga0501048_0361717 3300049582 Bacteria 1035
237 Ga0501067_0000429 3300049583 Bacteria 22943
238 Ga0501067_0010985 3300049583 Bacteria 5014
239 Ga0501070_0006767 3300049586 Bacteria 9756
240 Ga0501070_0062604 3300049586 Bacteria 3082
241 Ga0501071_0050086 3300049587 Bacteria 3008
242 Ga0501071_0065153 3300049587 Bacteria 2645
243 Ga0501072_0019065 3300049588 Bacteria 5297
244 Ga0501073_0056941 3300049589 Bacteria 2733
245 Ga0501073_0178255 3300049589 Bacteria 1471
246 Ga0501074_0200422 3300049590 Bacteria 1422
247 Ga0501074_0297004 3300049590 Bacteria 1148
248 Ga0501075_0109070 3300049591 Bacteria 2104
249 Ga0501075_0111968 3300049591 Bacteria 2075
250 Ga0501075_0398331 3300049591 Bacteria 1049
251 Ga0501075_0403866 3300049591 Bacteria 1042
252 Ga0501076_0020738 3300049592 Bacteria 5032
253 Ga0501076_0396817 3300049592 Bacteria 1134
254 Ga0501077_0012554 3300049593 Bacteria 5305
255 Ga0501077_0016500 3300049593 Bacteria 4653
256 Ga0501077_0098750 3300049593 Bacteria 1851
257 Ga0501079_0146910 3300049741 Bacteria 1837
258 Ga0501080_0000020 3300049742 Bacteria 91998
259 Ga0501081_0046165 3300049743 Bacteria 2993
260 Ga0501081_0046675 3300049743 Bacteria 2978
261 Ga0501081_0127745 3300049743 Bacteria 1814
262 Ga0501081_0136537 3300049743 Bacteria 1756
263 Ga0501081_0318502 3300049743 Bacteria 1143
264 Ga0501083_0043231 3300049744 Bacteria 3053
265 Ga0501083_0113608 3300049744 Bacteria 1779
266 Ga0501035_0000077 3300049822 Bacteria 121242
267 Ga0501044_0000013 3300049823 Bacteria 248795
268 Ga0501044_0068363 3300049823 Bacteria 3619
269 Ga0501044_0231734 3300049823 Bacteria 1794
270 Ga0501044_0703476 3300049823 Bacteria 896
271 Ga0501045_0033078 3300049824 Bacteria 3749
272 Ga0501045_0056691 3300049824 Bacteria 2866
273 Ga0501045_0140689 3300049824 Bacteria 1794
274 Ga0501045_0231949 3300049824 Bacteria 1374
275 Ga0501045_0585393 3300049824 Bacteria 827
276 nmdc:mga03683_2633_c1 3300050489 Bacteria 5615
277 nmdc:mga05p37_51764_c1 3300050507 Bacteria 5049
278 nmdc:mga05p37_715889_c1 3300050507 Bacteria 1109
279 nmdc:mga06r32_191448_c1 3300050510 Bacteria 2033
280 nmdc:mga06r32_398448_c1 3300050510 Bacteria 1358
281 nmdc:mga08y16_710614_c1 3300050511 Bacteria 1004
282 Ga0495612_0034512 3300053078 Bacteria 2049
283 Ga0495612_0046745 3300053078 Bacteria 1773
284 Ga0495612_0108549 3300053078 Bacteria 1186
285 Ga0495612_0307689 3300053078 Bacteria 711
286 Ga0495595_0066051 3300053084 Bacteria 1702
287 Ga0495619_0051823 3300053085 Bacteria 2713
288 Ga0495619_0412686 3300053085 Bacteria 932
289 Ga0495619_0525794 3300053085 Bacteria 812
290 Ga0500644_0043571 3300053088 Bacteria 1502
291 Ga0500647_0049699 3300053091 Bacteria 2017
292 Ga0500572_000894 3300053111 Bacteria 9238
293 Ga0500559_0000528 3300053136 Bacteria 26610
294 Ga0500636_0028370 3300053177 Bacteria 3306
295 Ga0500576_033191 3300053725 Bacteria 2340
296 Ga0501084_0040891 3300054114 Bacteria 3879
297 Ga0501082_0070322 3300060353 Bacteria 3013
298 Ga0501082_0142167 3300060353 Bacteria 2083
299 Ga0501082_0312449 3300060353 Bacteria 1369
300 Ga0530510_0026199 3300061734 Bacteria 4171
301 2821447920 2821443989 Bacteria 7658172
302 2842777240 2842775625 Bacteria 5587290
303 Ga0436360_0952577
304 Ga0055539_1015534
305 Ga0070658_10006731
306 Ga0070680_100011468
307 Ga0070680_100630313
308 Ga0070691_10099280
309 Ga0070675_100816348
310 Ga0070667_100493646
311 Ga0070714_100369751
312 Ga0070713_100417056
313 Ga0070713_100670348
314 Ga0070711_100110747
315 Ga0070711_100131568
316 Ga0070681_10004161
317 Ga0070681_10717434
318 Ga0070706_100212937
319 Ga0070707_100560739
320 Ga0070679_100005007
321 Ga0070672_100511913
322 Ga0070686_100745383
323 Ga0070696_100082473
324 Ga0070665_100021208
325 Ga0068855_100716558
326 Ga0070664_100404815
327 Ga0068856_100844898
328 Ga0068858_100499854
329 Ga0068862_100590614
330 Ga0070717_10037613
331 Ga0075431_100119645
332 Ga0099795_10062271
333 Ga0105240_10028349
334 Ga0105240_10036779
335 Ga0105240_10260839
336 Ga0111539_10191704
337 Ga0111539_10962370
338 Ga0105247_10107304
339 Ga0114129_10013661
340 Ga0114129_10063634
341 Ga0105241_10350514
342 Ga0105242_10985311
343 Ga0105248_10544466
344 Ga0105238_10002503
345 Ga0105238_10174151
346 Ga0105238_10212227
347 Ga0105239_11398731
348 Ga0163162_11845743
349 Ga0157380_10362680
350 Ga0182008_10257726
351 Ga0213874_10023222
352 Ga0213874_10024287
353 Ga0213876_10128586
354 Ga0213875_10008579
355 Ga0213871_10045279
356 Ga0213871_10120631
357 Ga0209677_100846
358 Ga0209233_1010933
359 Ga0209455_1010100
360 Ga0209455_1016018
361 Ga0207705_10086006
362 Ga0207707_10080711
363 Ga0207707_10283023
364 Ga0207695_10018806
365 Ga0207695_10108666
366 Ga0207695_10150298
367 Ga0207695_10339762
368 Ga0207693_10048960
369 Ga0207663_10083662
370 Ga0207694_10007445
371 Ga0207694_10097604
372 Ga0207659_10637662
373 Ga0207700_10022006
374 Ga0207664_10068026
375 Ga0207667_10205992
376 Ga0207667_10410199
377 Ga0207668_10889784
378 Ga0207703_10069022
379 Ga0207708_10074415
380 Ga0207702_10348164
381 Ga0207641_10733089
382 Ga0207648_10626361
383 Ga0207675_100965187
384 Ga0207683_10391436
385 Ga0268266_10053450
386 Ga0268264_10087298
387 Ga0265337_1005969
388 Ga0265326_10005877
389 Ga0265319_1000354
390 Ga0265334_10001600
391 Ga0265318_10061535
392 Ga0265323_10000264
393 Ga0265322_10006761
394 Ga0265336_10000291
395 Ga0265338_10000317
396 Ga0265324_10024868
397 Ga0265328_10000010
398 Ga0265328_10004225
399 Ga0265328_10006538
400 Ga0265328_10022467
401 Ga0265328_10075440
402 Ga0265331_10000075
403 Ga0265331_10150584
404 Ga0265331_10218060
405 Ga0265327_10044137
406 Ga0265316_10168712
407 Ga0373936_0107943
408 Ga0373954_0123365
409 Ga0373955_0154517
410 Ga0373924_0012938
411 Ga0373924_0148940
412 Ga0373931_0066725
413 Ga0373935_0412332
414 Ga0373933_0028674
415 Ga0373933_0080525
416 Ga0373933_0267572
417 Ga0373937_0005787
418 Ga0373937_0102318
419 Ga0316582_0093605
420 Ga0373925_0030241
421 Ga0373925_0218589
422 Ga0395900_0091660
423 Ga0436364_0604451
424 Ga0436364_0797754
425 Ga0436364_0889568
426 Ga0395901_0330787
427 Ga0436365_0030974
428 Ga0436365_0075318
429 Ga0436365_0151977
430 Ga0436365_0379932
431 Ga0436365_0581518
432 Ga0436360_0312759
433 Ga0436360_0343018
434 Ga0436361_0780683
435 Ga0436361_0842899
436 Ga0436363_0138051
437 Ga0436363_0557901
438 Ga0436363_0643256
439 Ga0436363_0913329
440 Ga0436363_1107800
441 Ga0436363_1661610
442 Ga0466957_0332561
443 Ga0466957_0455079
444 Ga0466959_0124468
445 Ga0451576_0013747
446 Ga0466967_0630399
447 Ga0495592_0004048
448 Ga0495651_0048080
449 Ga0495651_0057869
450 Ga0495651_0106678
451 Ga0495664_0122132
452 Ga0495664_0196719
453 Ga0495585_0114330
454 Ga0495608_0053517
455 Ga0495608_0371760
456 Ga0495616_0184886
457 Ga0495618_0112766
458 Ga0495652_0062711
459 Ga0495652_0132007
460 Ga0495640_0078556
461 Ga0495587_0067687
462 Ga0495587_0126108
463 Ga0495645_0117715
464 Ga0495645_0120772
465 Ga0495667_0069609
466 Ga0495667_0107060
467 Ga0495635_0071361
468 Ga0495657_0066812
469 Ga0495623_0090908
470 Ga0495646_0060787
471 Ga0495647_0299497
472 Ga0495658_0293226
473 Ga0495613_0110997
474 Ga0495604_0081104
475 Ga0495604_0173895
476 Ga0495674_0066514
477 Ga0495674_0431348
478 Ga0495672_0023478
479 Ga0495680_0034718
480 Ga0495684_0269799
481 Ga0495602_0058732
482 Ga0495602_0423435
483 Ga0496101_0265502
484 Ga0496102_0085990
485 Ga0496102_0304994
486 Ga0496102_0501865
487 Ga0496103_0078693
488 Ga0496103_0456765
489 Ga0496107_0110111
490 Ga0496109_0808116
491 Ga0496110_0823771
492 Ga0496115_0730658
493 Ga0496117_0154409
494 Ga0496118_0020570
495 Ga0496118_0143210
496 Ga0496118_0162567
497 Ga0496121_0036706
498 Ga0496121_0150316
499 Ga0496121_0188372
500 Ga0496122_0105042
501 Ga0496124_0052025
502 Ga0496125_0042774
503 Ga0496125_0196088
504 Ga0496126_0245551
505 Ga0496126_0621014
506 Ga0501031_0114898
507 Ga0501031_0201420
508 Ga0501034_0000031
509 Ga0501034_0032184
510 Ga0501036_0009754
511 Ga0501036_0051043
512 Ga0501036_0084745
513 Ga0501036_0204994
514 Ga0501037_0001537
515 Ga0501038_0007327
516 Ga0501038_0103746
517 Ga0501039_0000388
518 Ga0501039_0034980
519 Ga0501040_0018842
520 Ga0501040_0037630
521 Ga0501040_0137116
522 Ga0501041_0018500
523 Ga0501042_0024107
524 Ga0501042_0041145
525 Ga0501042_0058666
526 Ga0501043_0053472
527 Ga0501043_0137654
528 Ga0501046_0009420
529 Ga0501046_0087981
530 Ga0501046_0092015
531 Ga0501046_0166216
532 Ga0501047_0000201
533 Ga0501047_0002957
534 Ga0501047_0060459
535 Ga0501047_0242036
536 Ga0501048_0000736
537 Ga0501048_0101639
538 Ga0501048_0361717
539 Ga0501067_0000429
540 Ga0501067_0010985
541 Ga0501070_0006767
542 Ga0501070_0062604
543 Ga0501071_0050086
544 Ga0501071_0065153
545 Ga0501072_0019065
546 Ga0501073_0056941
547 Ga0501073_0178255
548 Ga0501074_0200422
549 Ga0501074_0297004
550 Ga0501075_0109070
551 Ga0501075_0111968
552 Ga0501075_0398331
553 Ga0501075_0403866
554 Ga0501076_0020738
555 Ga0501076_0396817
556 Ga0501077_0012554
557 Ga0501077_0016500
558 Ga0501077_0098750
559 Ga0501079_0146910
560 Ga0501080_0000020
561 Ga0501081_0046165
562 Ga0501081_0046675
563 Ga0501081_0127745
564 Ga0501081_0136537
565 Ga0501081_0318502
566 Ga0501083_0043231
567 Ga0501083_0113608
568 Ga0501035_0000077
569 Ga0501044_0000013
570 Ga0501044_0068363
571 Ga0501044_0231734
572 Ga0501044_0703476
573 Ga0501045_0033078
574 Ga0501045_0056691
575 Ga0501045_0140689
576 Ga0501045_0231949
577 Ga0501045_0585393
578 nmdc:mga03683_2633_c1
579 nmdc:mga05p37_51764_c1
580 nmdc:mga05p37_715889_c1
581 nmdc:mga06r32_191448_c1
582 nmdc:mga06r32_398448_c1
583 nmdc:mga08y16_710614_c1
584 Ga0495612_0034512
585 Ga0495612_0046745
586 Ga0495612_0108549
587 Ga0495612_0307689
588 Ga0495595_0066051
589 Ga0495619_0051823
590 Ga0495619_0412686
591 Ga0495619_0525794
592 Ga0500644_0043571
593 Ga0500647_0049699
594 Ga0500572_000894
595 Ga0500559_0000528
596 Ga0500636_0028370
597 Ga0500576_033191
598 Ga0501084_0040891
599 Ga0501082_0070322
600 Ga0501082_0142167
601 Ga0501082_0312449
602 Ga0530510_0026199
603 2821447920
604 2842777240

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02570

CbiC

Precorrin-8X methylmutase

47

242

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4au1-assembly1.cif.gz_A crystal structure of cobh (precorrin-8x methyl mutase) complexed with c5 desmethyl-hba 0.9862 5 210
5n0g-assembly1.cif.gz_A-2 crystal structure of cobh t85a (precorrin-8x methyl mutase) complexed with c5 allyl-hba 0.9847 5 210
1f2v-assembly1.cif.gz_A crystal structure analysis of precorrin-8x methylmutase of aerobic vitamin b12 synthesis 0.9825 5 206
3e7d-assembly1.cif.gz_A crystal structure of precorrin-8x methyl mutase cbic/cobh from brucella melitensis 0.979 7 207
4au1-assembly1.cif.gz_A crystal structure of cobh (precorrin-8x methyl mutase) complexed with c5 desmethyl-hba 0.9722 5 210
ID Description Score Start End Superfamily
3e7dD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Cobalamin biosynthesis CobH/CbiC, precorrin-8X methylmutase 0.981 7 208 3.40.50.10230
3e7dD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Cobalamin biosynthesis CobH/CbiC, precorrin-8X methylmutase 0.9669 7 208 3.40.50.10230
2afvB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Cobalamin biosynthesis CobH/CbiC, precorrin-8X methylmutase 0.9258 5 205 3.40.50.10230
af_Q58340_4_210_3.40.50.10230 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Cobalamin biosynthesis CobH/CbiC, precorrin-8X methylmutase 0.9074 7 205 3.40.50.10230
1ou0B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Cobalamin biosynthesis CobH/CbiC, precorrin-8X methylmutase 0.907 17 206 3.40.50.10230
ID Description Score Start End GO Terms
AF-A0A6G3X8A9-F1-model_v4 Precorrin-8X methylmutase (EC 5.4.99.61) 0.9993 63 178 GO:0009236
GO:0016993
AF-A0A511DQT6-F1-model_v4 Precorrin-8X methylmutase 0.9962 43 210 GO:0009236
GO:0016993
AF-A0A4P0UDN0-F1-model_v4 deleted 0.9934 82 210
AF-A0A0C9M4D2-F1-model_v4 CobH protein 0.9922 41 210 GO:0009236
GO:0016993
AF-F3G4J8-F1-model_v4 Precorrin-8X methylmutase (EC 5.4.1.2) 0.992 74 210 GO:0009236
GO:0016993

Map