F396595

General Info

Members Datasets Scaffolds Average Seq Length
302 192 604 458

Family's Representative Sequence

Representative Sequence 3300035725|Ga0373947_0079180|Ga0373947_0079180_260_1750
Length 496
Sequence MPTWRVASCAPRNNRTAHRAATSELHSPTIEQGGIDMSSHREAPGIAKDPVADNTDLYAFVSPDDPKTVTILANFIPLEYPPGGPNFFEFGDDVTYAIHISNDGSPDPEITYRFQFKTSLRNHKTFLYNTGPIDSLDSPNWNRRQFFSVARVLKGGGRTELGNDLACPPCNVGPRSTPDYASLAEDAVHTLDSGEVVFAGQRNEGFYVDLGSIFDLGDLRPFQSLHLIPTPNAPGVDATRGASVHTIALKIPKKMLTRDGLKPTDPADPKSVIGVWASASRRKTTVRDDQGDITDVGPWVQVSRLGNPLFNEVITPMAKKDYWNALPPSGDAEFLKYVQHPELATLLPILYPGVFPNLASLKADRADLAAILLTGIPSGLIPGFQNFTGSAPADMLRLNMAIPPASDPNIYGLLGGDLAGYPNGRRVQDDVVAIELRAIAGVTYPLVDPSYTPDGAAGVITDGTTPDSNPIPFMGSFPYLGVPLSGYDVVPPDKAA

Samples

Sample ID Description Type Environment
1 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
2 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
63 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
64 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
65 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
91 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
94 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
99 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
100 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
101 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
102 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
103 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
104 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
105 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
106 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
107 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
108 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
109 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
110 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
111 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
112 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
113 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
114 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
115 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
116 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
117 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
118 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
119 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
120 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
121 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
122 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
123 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
124 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
125 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
126 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
127 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
128 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
129 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
130 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
131 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
132 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
133 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
134 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
135 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
136 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
137 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
138 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
139 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
140 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
141 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
142 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
143 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
144 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
145 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
146 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
147 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
148 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
149 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
150 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
151 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
152 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
153 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
154 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
155 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
156 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
157 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
158 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
159 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
160 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
161 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
162 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
163 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
164 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
169 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
170 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
171 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
172 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
173 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
174 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
175 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
176 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
177 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
178 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
179 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
180 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
181 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
182 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
183 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
184 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
185 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
186 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
187 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
188 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
189 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
190 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
191 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
192 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.68
Metatranscriptomes 0.99
Isolates 0.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.32
Nodule 0
Rhizoplane 13.58
Rhizosphere 78.48
Stem 0
Stem Tuber 0
Unclassified 0.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373947_0079180 3300035725 Bacteria 2030
2 Ga0058861_10089452 3300004800 Bacteria 1940
3 Ga0058862_10261890 3300004803 Bacteria 2483
4 Ga0070683_100001487 3300005329 Bacteria 18080
5 Ga0068869_100059805 3300005334 Bacteria 2791
6 Ga0070692_10022841 3300005345 Bacteria 3060
7 Ga0070671_100002437 3300005355 Bacteria 14382
8 Ga0070659_100045059 3300005366 Bacteria 3455
9 Ga0070667_100078772 3300005367 Bacteria 2816
10 Ga0070703_10001606 3300005406 Bacteria 6716
11 Ga0070709_10000129 3300005434 Bacteria 50133
12 Ga0070714_100014887 3300005435 Bacteria 6252
13 Ga0070714_100052868 3300005435 Bacteria 3465
14 Ga0070713_100008723 3300005436 Bacteria 7211
15 Ga0070710_10028558 3300005437 Bacteria 2985
16 Ga0070694_100048347 3300005444 Bacteria 2861
17 Ga0070708_100003628 3300005445 Bacteria 12104
18 Ga0070708_100038429 3300005445 Bacteria 4181
19 Ga0070708_100080849 3300005445 Bacteria 2941
20 Ga0070708_100121929 3300005445 Bacteria 2405
21 Ga0070708_100136344 3300005445 Bacteria 2274
22 Ga0070708_100300221 3300005445 Bacteria 1512
23 Ga0070681_10002282 3300005458 Bacteria 17522
24 Ga0070706_100000607 3300005467 Bacteria 41468
25 Ga0070706_100004353 3300005467 Bacteria 13683
26 Ga0070706_100127173 3300005467 Bacteria 2377
27 Ga0070706_100269993 3300005467 Bacteria 1587
28 Ga0070707_100000400 3300005468 Archaea 42804
29 Ga0070707_100016906 3300005468 Bacteria 6852
30 Ga0070707_100017025 3300005468 Archaea 6826
31 Ga0070707_100049253 3300005468 Archaea 4038
32 Ga0070707_100108905 3300005468 Bacteria 2687
33 Ga0070698_100002954 3300005471 Bacteria 18701
34 Ga0070698_100016202 3300005471 Bacteria 7869
35 Ga0070699_100000349 3300005518 Bacteria 44808
36 Ga0070699_100019545 3300005518 Bacteria 5835
37 Ga0070699_100053456 3300005518 Bacteria 3495
38 Ga0070699_100054731 3300005518 Bacteria 3454
39 Ga0070679_100030194 3300005530 Bacteria 5350
40 Ga0070697_100003317 3300005536 Bacteria 12368
41 Ga0070697_100036529 3300005536 Bacteria 3969
42 Ga0070697_100059293 3300005536 Unclassified 3116
43 Ga0070697_100099630 3300005536 Bacteria 2412
44 Ga0070686_100064539 3300005544 Bacteria 2375
45 Ga0070696_100060086 3300005546 Bacteria 2657
46 Ga0070665_100159436 3300005548 Bacteria 2258
47 Ga0070704_100058823 3300005549 Bacteria 2739
48 Ga0070664_100123306 3300005564 Bacteria 2271
49 Ga0068856_100011303 3300005614 Bacteria 8666
50 Ga0070702_100078182 3300005615 Bacteria 1974
51 Ga0068864_100056370 3300005618 Bacteria 3395
52 Ga0068858_100153586 3300005842 Bacteria 2165
53 Ga0081455_10000030 3300005937 Bacteria 148346
54 Ga0081538_10025306 3300005981 Bacteria 4190
55 Ga0070717_10004867 3300006028 Bacteria 9767
56 Ga0070717_10021966 3300006028 Bacteria 5035
57 Ga0075363_100002331 3300006048 Bacteria 7715
58 Ga0070712_100029746 3300006175 Bacteria 3664
59 Ga0068871_100054730 3300006358 Bacteria 3238
60 Ga0075428_100005979 3300006844 Bacteria 13519
61 Ga0075428_100011332 3300006844 Bacteria 9921
62 Ga0075428_100125844 3300006844 Bacteria 2789
63 Ga0075430_100081998 3300006846 Bacteria 2702
64 Ga0075430_100093564 3300006846 Bacteria 2513
65 Ga0075431_100002333 3300006847 Bacteria 18236
66 Ga0075431_100012691 3300006847 Bacteria 8509
67 Ga0075431_100015335 3300006847 Bacteria 7764
68 Ga0075433_10027424 3300006852 Bacteria 4831
69 Ga0075433_10049569 3300006852 Bacteria 3653
70 Ga0075434_100059332 3300006871 Bacteria 3803
71 Ga0075434_100117588 3300006871 Bacteria 2672
72 Ga0075429_100015007 3300006880 Bacteria 6718
73 Ga0075435_100060675 3300007076 Bacteria 3066
74 Ga0099794_10012936 3300007265 Bacteria 3619
75 Ga0111539_10006276 3300009094 Bacteria 15347
76 Ga0111539_10015781 3300009094 Bacteria 9384
77 Ga0111539_10045926 3300009094 Bacteria 5227
78 Ga0105247_10025903 3300009101 Bacteria 3539
79 Ga0114129_10007537 3300009147 Bacteria 15495
80 Ga0114129_10008795 3300009147 Bacteria 14406
81 Ga0114129_10012611 3300009147 Bacteria 12035
82 Ga0114129_10112252 3300009147 Bacteria 3759
83 Ga0114129_10264344 3300009147 Bacteria 2304
84 Ga0105243_10021845 3300009148 Bacteria 4859
85 Ga0105243_10181051 3300009148 Bacteria 1833
86 Ga0105241_10063112 3300009174 Bacteria 2857
87 Ga0105242_10069543 3300009176 Bacteria 2916
88 Ga0105237_10057167 3300009545 Bacteria 3904
89 Ga0105238_10027270 3300009551 Bacteria 5820
90 Ga0105249_10229215 3300009553 Bacteria 1831
91 Ga0157370_10033101 3300013104 Bacteria 5040
92 Ga0157374_10050984 3300013296 Bacteria 3850
93 Ga0157375_10015719 3300013308 Bacteria 6781
94 Ga0163163_10065982 3300014325 Bacteria 3594
95 Ga0163163_10275143 3300014325 Bacteria 1735
96 Ga0157380_10060502 3300014326 Bacteria 3027
97 Ga0157376_10025959 3300014969 Bacteria 4623
98 Ga0213874_10001682 3300021377 Bacteria 4640
99 Ga0213876_10012136 3300021384 Bacteria 4590
100 Ga0213875_10000350 3300021388 Bacteria 43190
101 Ga0213875_10015549 3300021388 Bacteria 3702
102 Ga0213875_10032973 3300021388 Bacteria 2446
103 Ga0224712_10063964 3300022467 Bacteria 1474
104 Ga0207653_10000104 3300025885 Bacteria 59204
105 Ga0207692_10055322 3300025898 Bacteria 2030
106 Ga0207710_10040942 3300025900 Bacteria 2054
107 Ga0207647_10059957 3300025904 Bacteria 2327
108 Ga0207699_10000035 3300025906 Bacteria 129523
109 Ga0207684_10000100 3300025910 Bacteria 163084
110 Ga0207684_10001428 3300025910 Bacteria 25821
111 Ga0207684_10064426 3300025910 Bacteria 3111
112 Ga0207693_10002570 3300025915 Bacteria 15769
113 Ga0207652_10018751 3300025921 Bacteria 5679
114 Ga0207646_10000003 3300025922 Bacteria 537256
115 Ga0207646_10000036 3300025922 Bacteria 197163
116 Ga0207646_10002039 3300025922 Bacteria 24260
117 Ga0207646_10003022 3300025922 Bacteria 19376
118 Ga0207646_10078981 3300025922 Unclassified 2942
119 Ga0207700_10000769 3300025928 Bacteria 18532
120 Ga0207700_10005749 3300025928 Bacteria 7447
121 Ga0207644_10012488 3300025931 Bacteria 5644
122 Ga0207709_10051662 3300025935 Bacteria 2520
123 Ga0207709_10093521 3300025935 Bacteria 1971
124 Ga0207665_10000873 3300025939 Bacteria 20381
125 Ga0207661_10002532 3300025944 Bacteria 12574
126 Ga0207679_10100286 3300025945 Bacteria 2263
127 Ga0207658_10129278 3300025986 Bacteria 2027
128 Ga0207678_10004576 3300026067 Bacteria 12442
129 Ga0207708_10021247 3300026075 Bacteria 4894
130 Ga0207702_10007515 3300026078 Bacteria 9291
131 Ga0207675_100092665 3300026118 Bacteria 2841
132 Ga0207683_10028789 3300026121 Bacteria 4806
133 Ga0209588_1000834 3300027671 Archaea 7828
134 Ga0207428_10003898 3300027907 Bacteria 14307
135 Ga0268264_10207083 3300028381 Bacteria 1798
136 Ga0265319_1008823 3300028563 Bacteria 4370
137 Ga0265318_10012035 3300028577 Bacteria 3696
138 Ga0265338_10149507 3300028800 Bacteria 1816
139 Ga0265320_10020727 3300031240 Bacteria 3554
140 Ga0307409_100159215 3300031995 Bacteria 1972
141 Ga0395900_0185031 3300037418 Bacteria 2115
142 Ga0436364_0339503 3300037853 Bacteria 2449
143 Ga0436364_0417959 3300037853 Bacteria 2696
144 Ga0436364_0798736 3300037853 Bacteria 130922
145 Ga0436364_1491668 3300037853 Bacteria 2347
146 Ga0395901_0174348 3300038443 Bacteria 2256
147 Ga0436365_0031309 3300039437 Bacteria 4774
148 Ga0436365_1161293 3300039437 Bacteria 3106
149 Ga0436365_1179439 3300039437 Bacteria 2545
150 Ga0436365_1263623 3300039437 Bacteria 4026
151 Ga0436365_1585825 3300039437 Bacteria 26954
152 Ga0436365_1636480 3300039437 Bacteria 4935
153 Ga0436361_0740153 3300039447 Bacteria 3331
154 Ga0436363_0916483 3300039450 Bacteria 4671
155 Ga0436363_1712752 3300039450 Bacteria 2072
156 Ga0436362_0566415 3300039453 Bacteria 2766
157 Ga0436362_1074817 3300039453 Bacteria 3470
158 Ga0451789_0079032 3300041443 Bacteria 4868
159 Ga0451791_0479431 3300041451 Bacteria 10206
160 Ga0451793_0158040 3300041452 Bacteria 12821
161 Ga0451797_0846978 3300041453 Bacteria 2628
162 Ga0451839_0009913 3300041496 Bacteria 1786
163 Ga0451843_0759036 3300041509 Bacteria 2114
164 Ga0451853_3582399 3300041512 Bacteria 2540
165 Ga0466969_0046565 3300044656 Bacteria 2150
166 Ga0466972_0006835 3300044658 Bacteria 5725
167 Ga0466963_0016325 3300044694 Bacteria 4616
168 Ga0466963_0162134 3300044694 Bacteria 1556
169 Ga0466964_0002631 3300044706 Bacteria 6429
170 Ga0466958_0000987 3300045836 Bacteria 12860
171 Ga0466967_0018162 3300045976 Bacteria 5612
172 Ga0466967_0037379 3300045976 Bacteria 4154
173 Ga0466967_0041720 3300045976 Bacteria 3959
174 Ga0466967_0057862 3300045976 Bacteria 3424
175 Ga0466967_0122839 3300045976 Bacteria 2402
176 Ga0466967_0202437 3300045976 Bacteria 1881
177 Ga0495592_0003044 3300046454 Bacteria 11944
178 Ga0495629_0000961 3300046459 Bacteria 23244
179 Ga0495651_0006620 3300046462 Bacteria 8848
180 Ga0495651_0011243 3300046462 Bacteria 6879
181 Ga0495653_0115674 3300046463 Bacteria 1919
182 Ga0495582_0000573 3300046473 Bacteria 20346
183 Ga0495639_0006291 3300046475 Bacteria 5100
184 Ga0495662_0000049 3300046476 Bacteria 41146
185 Ga0495664_0023622 3300046477 Bacteria 3568
186 Ga0495664_0065737 3300046477 Bacteria 2162
187 Ga0495628_0126057 3300046516 Bacteria 1961
188 Ga0495630_0009518 3300046517 Bacteria 6988
189 Ga0495666_0000429 3300046526 Bacteria 18624
190 Ga0495652_0004260 3300046529 Bacteria 13747
191 Ga0495652_0053702 3300046529 Bacteria 3433
192 Ga0495665_0050728 3300046531 Bacteria 2199
193 Ga0495640_0005745 3300046533 Bacteria 9856
194 Ga0495640_0073749 3300046533 Bacteria 2284
195 Ga0495586_0005840 3300046535 Bacteria 6580
196 Ga0495586_0033924 3300046535 Bacteria 2740
197 Ga0495587_0012524 3300046536 Bacteria 5333
198 Ga0495645_0004691 3300046543 Bacteria 9329
199 Ga0495645_0111135 3300046543 Bacteria 1939
200 Ga0495667_0038297 3300046559 Bacteria 3193
201 Ga0495634_0037855 3300046642 Bacteria 3293
202 Ga0495635_0026460 3300046663 Bacteria 4035
203 Ga0495599_0001841 3300046678 Bacteria 12293
204 Ga0495623_0002528 3300046679 Bacteria 12102
205 Ga0495646_0000615 3300046680 Bacteria 19426
206 Ga0495658_0000080 3300046683 Bacteria 48134
207 Ga0495613_0000847 3300046689 Bacteria 23476
208 Ga0495613_0001294 3300046689 Bacteria 19113
209 Ga0495600_0022645 3300046809 Bacteria 4035
210 Ga0495600_0081051 3300046809 Bacteria 2119
211 Ga0495581_0084145 3300047315 Bacteria 1843
212 Ga0495604_0001531 3300047317 Bacteria 19034
213 Ga0495674_0069388 3300047319 Bacteria 3047
214 Ga0495676_0021752 3300047321 Bacteria 5593
215 Ga0495675_0012440 3300047444 Bacteria 5356
216 Ga0495684_0018536 3300047471 Bacteria 5362
217 Ga0495593_0040393 3300047673 Bacteria 2512
218 Ga0495602_0044343 3300048088 Bacteria 4035
219 Ga0496101_0017147 3300048904 Bacteria 4907
220 Ga0496101_0020828 3300048904 Bacteria 4498
221 Ga0496101_0092308 3300048904 Bacteria 2254
222 Ga0496102_0008380 3300048905 Bacteria 8853
223 Ga0496102_0049071 3300048905 Bacteria 3839
224 Ga0496102_0117097 3300048905 Bacteria 2486
225 Ga0496102_0136775 3300048905 Bacteria 2296
226 Ga0496103_0011027 3300048906 Bacteria 5350
227 Ga0496103_0019232 3300048906 Bacteria 4101
228 Ga0496104_0004794 3300048907 Bacteria 11781
229 Ga0496104_0100340 3300048907 Bacteria 2771
230 Ga0496105_0092018 3300048908 Bacteria 2504
231 Ga0496106_0060446 3300048909 Bacteria 2872
232 Ga0496106_0107535 3300048909 Bacteria 2169
233 Ga0496107_0011506 3300048910 Bacteria 6164
234 Ga0496107_0027596 3300048910 Bacteria 4032
235 Ga0496108_0003934 3300048911 Bacteria 11930
236 Ga0496109_0013322 3300048912 Bacteria 7126
237 Ga0496109_0068477 3300048912 Bacteria 3254
238 Ga0496109_0216263 3300048912 Bacteria 1802
239 Ga0496110_0161144 3300048913 Bacteria 2033
240 Ga0496111_0018979 3300048914 Bacteria 4768
241 Ga0496111_0119563 3300048914 Bacteria 1946
242 Ga0496112_0015471 3300048915 Bacteria 7121
243 Ga0496112_0044841 3300048915 Bacteria 4334
244 Ga0496112_0204105 3300048915 Bacteria 1935
245 Ga0496113_0038567 3300048916 Bacteria 3514
246 Ga0496113_0057244 3300048916 Bacteria 2929
247 Ga0496114_0010440 3300048917 Bacteria 7389
248 Ga0496114_0016807 3300048917 Bacteria 5900
249 Ga0496114_0020704 3300048917 Bacteria 5339
250 Ga0496114_0040206 3300048917 Bacteria 3870
251 Ga0496114_0048174 3300048917 Bacteria 3545
252 Ga0496114_0176723 3300048917 Bacteria 1863
253 Ga0496114_0202557 3300048917 Bacteria 1739
254 Ga0496114_0222079 3300048917 Bacteria 1659
255 Ga0496115_0039886 3300048918 Bacteria 3731
256 Ga0501034_0010438 3300049571 Bacteria 9674
257 Ga0501034_0041213 3300049571 Bacteria 4672
258 Ga0501037_0024896 3300049573 Bacteria 4424
259 Ga0501037_0152060 3300049573 Bacteria 1653
260 Ga0501043_0126195 3300049579 Bacteria 2007
261 Ga0501047_0091944 3300049581 Bacteria 2913
262 Ga0501047_0238283 3300049581 Bacteria 1671
263 Ga0501067_0062927 3300049583 Bacteria 2054
264 Ga0501068_0099596 3300049584 Bacteria 1800
265 Ga0501069_0022607 3300049585 Bacteria 3423
266 Ga0501070_0001754 3300049586 Bacteria 19172
267 Ga0501071_0069355 3300049587 Bacteria 2567
268 Ga0501071_0184561 3300049587 Bacteria 1563
269 Ga0501071_0194272 3300049587 Bacteria 1523
270 Ga0501072_0006340 3300049588 Bacteria 9011
271 Ga0501072_0133752 3300049588 Bacteria 1977
272 Ga0501072_0138043 3300049588 Bacteria 1944
273 Ga0501073_0004149 3300049589 Bacteria 10866
274 Ga0501074_0009624 3300049590 Bacteria 7014
275 Ga0501074_0020392 3300049590 Bacteria 4818
276 Ga0501079_0024612 3300049741 Bacteria 4620
277 Ga0501080_0005543 3300049742 Bacteria 11272
278 Ga0501080_0007186 3300049742 Bacteria 10050
279 Ga0501081_0109825 3300049743 Bacteria 1957
280 Ga0501083_0051262 3300049744 Bacteria 2775
281 Ga0501044_0032996 3300049823 Bacteria 5441
282 nmdc:mga0yw44_93704_c1 3300050492 Bacteria 1902
283 nmdc:mga05p37_15526_c1 3300050507 Bacteria 9155
284 nmdc:mga05p37_19184_c1 3300050507 Bacteria 8271
285 nmdc:mga05p37_54696_c1 3300050507 Bacteria 4910
286 nmdc:mga05p37_58003_c1 3300050507 Bacteria 4768
287 nmdc:mga09592_17215_c1 3300050508 Bacteria 5919
288 nmdc:mga09592_459_c1 3300050508 Bacteria 30394
289 nmdc:mga06r32_152_c1 3300050510 Bacteria 52842
290 nmdc:mga06r32_6634_c1 3300050510 Bacteria 10404
291 nmdc:mga08y16_106217_c1 3300050511 Bacteria 2922
292 nmdc:mga08y16_267968_c1 3300050511 Bacteria 1763
293 nmdc:mga08y16_28339_c1 3300050511 Bacteria 5904
294 nmdc:mga08y16_823_c1 3300050511 Bacteria 29766
295 nmdc:mga08x19_25152_c1 3300050514 Bacteria 3708
296 nmdc:mga08x19_26819_c1 3300050514 Bacteria 3598
297 nmdc:mga0a205_16201_c1 3300050515 Bacteria 6980
298 Ga0500573_0116350 3300053140 Bacteria 1492
299 Ga0500604_0027176 3300053151 Bacteria 1654
300 Ga0501084_0114675 3300054114 Bacteria 2265
301 Ga0501082_0070415 3300060353 Bacteria 3011
302 2819728613 2818991469 Bacteria 4644110
303 Ga0373947_0079180
304 Ga0058861_10089452
305 Ga0058862_10261890
306 Ga0070683_100001487
307 Ga0068869_100059805
308 Ga0070692_10022841
309 Ga0070671_100002437
310 Ga0070659_100045059
311 Ga0070667_100078772
312 Ga0070703_10001606
313 Ga0070709_10000129
314 Ga0070714_100014887
315 Ga0070714_100052868
316 Ga0070713_100008723
317 Ga0070710_10028558
318 Ga0070694_100048347
319 Ga0070708_100003628
320 Ga0070708_100038429
321 Ga0070708_100080849
322 Ga0070708_100121929
323 Ga0070708_100136344
324 Ga0070708_100300221
325 Ga0070681_10002282
326 Ga0070706_100000607
327 Ga0070706_100004353
328 Ga0070706_100127173
329 Ga0070706_100269993
330 Ga0070707_100000400
331 Ga0070707_100016906
332 Ga0070707_100017025
333 Ga0070707_100049253
334 Ga0070707_100108905
335 Ga0070698_100002954
336 Ga0070698_100016202
337 Ga0070699_100000349
338 Ga0070699_100019545
339 Ga0070699_100053456
340 Ga0070699_100054731
341 Ga0070679_100030194
342 Ga0070697_100003317
343 Ga0070697_100036529
344 Ga0070697_100059293
345 Ga0070697_100099630
346 Ga0070686_100064539
347 Ga0070696_100060086
348 Ga0070665_100159436
349 Ga0070704_100058823
350 Ga0070664_100123306
351 Ga0068856_100011303
352 Ga0070702_100078182
353 Ga0068864_100056370
354 Ga0068858_100153586
355 Ga0081455_10000030
356 Ga0081538_10025306
357 Ga0070717_10004867
358 Ga0070717_10021966
359 Ga0075363_100002331
360 Ga0070712_100029746
361 Ga0068871_100054730
362 Ga0075428_100005979
363 Ga0075428_100011332
364 Ga0075428_100125844
365 Ga0075430_100081998
366 Ga0075430_100093564
367 Ga0075431_100002333
368 Ga0075431_100012691
369 Ga0075431_100015335
370 Ga0075433_10027424
371 Ga0075433_10049569
372 Ga0075434_100059332
373 Ga0075434_100117588
374 Ga0075429_100015007
375 Ga0075435_100060675
376 Ga0099794_10012936
377 Ga0111539_10006276
378 Ga0111539_10015781
379 Ga0111539_10045926
380 Ga0105247_10025903
381 Ga0114129_10007537
382 Ga0114129_10008795
383 Ga0114129_10012611
384 Ga0114129_10112252
385 Ga0114129_10264344
386 Ga0105243_10021845
387 Ga0105243_10181051
388 Ga0105241_10063112
389 Ga0105242_10069543
390 Ga0105237_10057167
391 Ga0105238_10027270
392 Ga0105249_10229215
393 Ga0157370_10033101
394 Ga0157374_10050984
395 Ga0157375_10015719
396 Ga0163163_10065982
397 Ga0163163_10275143
398 Ga0157380_10060502
399 Ga0157376_10025959
400 Ga0213874_10001682
401 Ga0213876_10012136
402 Ga0213875_10000350
403 Ga0213875_10015549
404 Ga0213875_10032973
405 Ga0224712_10063964
406 Ga0207653_10000104
407 Ga0207692_10055322
408 Ga0207710_10040942
409 Ga0207647_10059957
410 Ga0207699_10000035
411 Ga0207684_10000100
412 Ga0207684_10001428
413 Ga0207684_10064426
414 Ga0207693_10002570
415 Ga0207652_10018751
416 Ga0207646_10000003
417 Ga0207646_10000036
418 Ga0207646_10002039
419 Ga0207646_10003022
420 Ga0207646_10078981
421 Ga0207700_10000769
422 Ga0207700_10005749
423 Ga0207644_10012488
424 Ga0207709_10051662
425 Ga0207709_10093521
426 Ga0207665_10000873
427 Ga0207661_10002532
428 Ga0207679_10100286
429 Ga0207658_10129278
430 Ga0207678_10004576
431 Ga0207708_10021247
432 Ga0207702_10007515
433 Ga0207675_100092665
434 Ga0207683_10028789
435 Ga0209588_1000834
436 Ga0207428_10003898
437 Ga0268264_10207083
438 Ga0265319_1008823
439 Ga0265318_10012035
440 Ga0265338_10149507
441 Ga0265320_10020727
442 Ga0307409_100159215
443 Ga0395900_0185031
444 Ga0436364_0339503
445 Ga0436364_0417959
446 Ga0436364_0798736
447 Ga0436364_1491668
448 Ga0395901_0174348
449 Ga0436365_0031309
450 Ga0436365_1161293
451 Ga0436365_1179439
452 Ga0436365_1263623
453 Ga0436365_1585825
454 Ga0436365_1636480
455 Ga0436361_0740153
456 Ga0436363_0916483
457 Ga0436363_1712752
458 Ga0436362_0566415
459 Ga0436362_1074817
460 Ga0451789_0079032
461 Ga0451791_0479431
462 Ga0451793_0158040
463 Ga0451797_0846978
464 Ga0451839_0009913
465 Ga0451843_0759036
466 Ga0451853_3582399
467 Ga0466969_0046565
468 Ga0466972_0006835
469 Ga0466963_0016325
470 Ga0466963_0162134
471 Ga0466964_0002631
472 Ga0466958_0000987
473 Ga0466967_0018162
474 Ga0466967_0037379
475 Ga0466967_0041720
476 Ga0466967_0057862
477 Ga0466967_0122839
478 Ga0466967_0202437
479 Ga0495592_0003044
480 Ga0495629_0000961
481 Ga0495651_0006620
482 Ga0495651_0011243
483 Ga0495653_0115674
484 Ga0495582_0000573
485 Ga0495639_0006291
486 Ga0495662_0000049
487 Ga0495664_0023622
488 Ga0495664_0065737
489 Ga0495628_0126057
490 Ga0495630_0009518
491 Ga0495666_0000429
492 Ga0495652_0004260
493 Ga0495652_0053702
494 Ga0495665_0050728
495 Ga0495640_0005745
496 Ga0495640_0073749
497 Ga0495586_0005840
498 Ga0495586_0033924
499 Ga0495587_0012524
500 Ga0495645_0004691
501 Ga0495645_0111135
502 Ga0495667_0038297
503 Ga0495634_0037855
504 Ga0495635_0026460
505 Ga0495599_0001841
506 Ga0495623_0002528
507 Ga0495646_0000615
508 Ga0495658_0000080
509 Ga0495613_0000847
510 Ga0495613_0001294
511 Ga0495600_0022645
512 Ga0495600_0081051
513 Ga0495581_0084145
514 Ga0495604_0001531
515 Ga0495674_0069388
516 Ga0495676_0021752
517 Ga0495675_0012440
518 Ga0495684_0018536
519 Ga0495593_0040393
520 Ga0495602_0044343
521 Ga0496101_0017147
522 Ga0496101_0020828
523 Ga0496101_0092308
524 Ga0496102_0008380
525 Ga0496102_0049071
526 Ga0496102_0117097
527 Ga0496102_0136775
528 Ga0496103_0011027
529 Ga0496103_0019232
530 Ga0496104_0004794
531 Ga0496104_0100340
532 Ga0496105_0092018
533 Ga0496106_0060446
534 Ga0496106_0107535
535 Ga0496107_0011506
536 Ga0496107_0027596
537 Ga0496108_0003934
538 Ga0496109_0013322
539 Ga0496109_0068477
540 Ga0496109_0216263
541 Ga0496110_0161144
542 Ga0496111_0018979
543 Ga0496111_0119563
544 Ga0496112_0015471
545 Ga0496112_0044841
546 Ga0496112_0204105
547 Ga0496113_0038567
548 Ga0496113_0057244
549 Ga0496114_0010440
550 Ga0496114_0016807
551 Ga0496114_0020704
552 Ga0496114_0040206
553 Ga0496114_0048174
554 Ga0496114_0176723
555 Ga0496114_0202557
556 Ga0496114_0222079
557 Ga0496115_0039886
558 Ga0501034_0010438
559 Ga0501034_0041213
560 Ga0501037_0024896
561 Ga0501037_0152060
562 Ga0501043_0126195
563 Ga0501047_0091944
564 Ga0501047_0238283
565 Ga0501067_0062927
566 Ga0501068_0099596
567 Ga0501069_0022607
568 Ga0501070_0001754
569 Ga0501071_0069355
570 Ga0501071_0184561
571 Ga0501071_0194272
572 Ga0501072_0006340
573 Ga0501072_0133752
574 Ga0501072_0138043
575 Ga0501073_0004149
576 Ga0501074_0009624
577 Ga0501074_0020392
578 Ga0501079_0024612
579 Ga0501080_0005543
580 Ga0501080_0007186
581 Ga0501081_0109825
582 Ga0501083_0051262
583 Ga0501044_0032996
584 nmdc:mga0yw44_93704_c1
585 nmdc:mga05p37_15526_c1
586 nmdc:mga05p37_19184_c1
587 nmdc:mga05p37_54696_c1
588 nmdc:mga05p37_58003_c1
589 nmdc:mga09592_17215_c1
590 nmdc:mga09592_459_c1
591 nmdc:mga06r32_152_c1
592 nmdc:mga06r32_6634_c1
593 nmdc:mga08y16_106217_c1
594 nmdc:mga08y16_267968_c1
595 nmdc:mga08y16_28339_c1
596 nmdc:mga08y16_823_c1
597 nmdc:mga08x19_25152_c1
598 nmdc:mga08x19_26819_c1
599 nmdc:mga0a205_16201_c1
600 Ga0500573_0116350
601 Ga0500604_0027176
602 Ga0501084_0114675
603 Ga0501082_0070415
604 2819728613

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14224

DUF4331

Domain of unknown function (DUF4331)

38

483

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vu7-assembly1.cif.gz_C crystal structure of rev1-rev7-rev3 ternary complex 0.657 59 89
4tzm-assembly1.cif.gz_A c. elegans htp-2 bound to htp-3 closure motif 1 0.486 59 86
4tzn-assembly2.cif.gz_B structure of htp-2 bound to htp-3 motif-6 0.483 59 86
6imj-assembly1.cif.gz_A the crystal structure of se-asfvlig:dna complex 0.4789 53 135
6imj-assembly1.cif.gz_B the crystal structure of se-asfvlig:dna complex 0.4769 53 135
ID Description Score Start End Superfamily
af_Q94FL5_7_197_3.30.900.10 Alpha Beta;2-Layer Sandwich;Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A;HORMA domain 0.6199 59 91 3.30.900.10
af_Q8I1U8_5_124_3.30.40.10 Alpha Beta;2-Layer Sandwich;Herpes Virus-1;Zinc/RING finger domain, C3HC4 (zinc finger) 0.531 74 117 3.30.40.10
4tzmA00 Alpha Beta;2-Layer Sandwich;Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A;HORMA domain 0.486 59 86 3.30.900.10
af_Q5A928_1_222_3.30.900.10 Alpha Beta;2-Layer Sandwich;Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A;HORMA domain 0.4847 59 98 3.30.900.10
af_Q7XN32_27_428_2.120.10.80 Mainly Beta;6 Propeller;Neuraminidase;Kelch-type beta propeller 0.4835 72 136 2.120.10.80
ID Description Score Start End GO Terms
AF-A0A535F2J1-F1-model_v4 DUF4331 domain-containing protein 0.9646 1 459
AF-A0A2X0I8V3-F1-model_v4 DUF4331 domain-containing protein 0.9579 52 459
AF-A0A535F2J1-F1-model_v4 DUF4331 domain-containing protein 0.9542 1 459
AF-A0A831WYP0-F1-model_v4 DUF4331 domain-containing protein 0.9529 155 465
AF-A0A535CX51-F1-model_v4 DUF4331 domain-containing protein 0.9508 108 461

Map