F396469

General Info

Members Datasets Scaffolds Average Seq Length
302 189 604 451

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10000004|Ga0105248_10000004438
Length 513
Sequence LTPSSSDATLRPLFCHAWNATFALSAEILSGIDPAFLQSGSSAAHLRQSPKILLARKDLMATNTVTNWFGNIVSHPQVIVDANSVDDIVAVLKDPATYPSPVRAVGSNHSTAPCGVAEGGTLIRMKMNQILNINASSNPPTLTVQAGATHLHMAQALQAQNLQFYVNTEIGSLSAGSAACAGTKDASFDGQYGQVGSYVIGAKMVLPSGELLEVTEADQPDLMQLLRSSYGLFGVIYEVTYQVRALTPMHVHHTTYELQDFIAALPELKASGYAMMFYMFPFQNKITVEFRKDNPSATGEPNHVAWALRNHIWGSFGPKFGHDTEQNFSVPAIRYDIIDTFNAAWRLQLETIVSSDNTLPAAQIIDYPPVSDDHRYTFSLFAFAEDAYPAAITDFYKFCNDYYKQKGYRSNLLYVGYRIAQDQKALLSYSWDTTVMTLDPVSTANEGWYDFLLAYNQFCTDRNGIPLLNQTPNLTPEILQKAFGSRLQTLANVRKQYDPNDRMLNDYFRTLLS

Samples

Sample ID Description Type Environment
1 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
55 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
77 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
78 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
79 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
80 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
81 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
82 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
83 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
84 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
85 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
86 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
89 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
90 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
91 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
92 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
93 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
94 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
95 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
96 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
97 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
98 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
99 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
100 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
101 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
102 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
103 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
104 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
105 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
106 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
107 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
108 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
109 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
110 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
111 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
112 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
113 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
114 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
115 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
116 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
117 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
118 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
119 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
120 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
121 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
122 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
123 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
124 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
125 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
126 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
127 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
128 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
129 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
130 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
133 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
134 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
135 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
136 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
137 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
138 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
139 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
140 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
141 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
142 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
143 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
158 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
159 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
160 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
161 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
162 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
163 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
164 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
165 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
166 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
167 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
168 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
169 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
170 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
171 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
172 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
177 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
178 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
179 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
180 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
181 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
182 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
183 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
185 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
186 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
187 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
188 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
189 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.34
Metatranscriptomes 0
Isolates 0.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.99
Nodule 0
Rhizoplane 5.3
Rhizosphere 91.39
Stem 0
Stem Tuber 0
Unclassified 15.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105248_10000004 3300009177 Bacteria 695244
2 JGI24751J29686_10004161 3300002459 Bacteria 2934
3 rootH2_10014198 3300003320 Bacteria 6877
4 rootH2_10154885 3300003320 Unclassified 1733
5 Ga0065707_10001892 3300005295 Bacteria 5699
6 Ga0070658_10034017 3300005327 Bacteria 4101
7 Ga0070658_10046481 3300005327 Unclassified 3512
8 Ga0070676_10027297 3300005328 Bacteria 3237
9 Ga0070683_100038427 3300005329 Bacteria 4388
10 Ga0070683_100100432 3300005329 Bacteria 2724
11 Ga0070670_100075303 3300005331 Bacteria 2900
12 Ga0070670_100105740 3300005331 Bacteria 2425
13 Ga0070670_100122571 3300005331 Bacteria 2243
14 Ga0068869_100035651 3300005334 Bacteria 3528
15 Ga0070660_100024007 3300005339 Bacteria 4522
16 Ga0070660_100125241 3300005339 Unclassified 2053
17 Ga0070661_100089901 3300005344 Bacteria 2274
18 Ga0070671_100012436 3300005355 Bacteria 6854
19 Ga0070714_100004410 3300005435 Bacteria 10593
20 Ga0070713_100004096 3300005436 Bacteria 9712
21 Ga0070711_100100125 3300005439 Bacteria 2107
22 Ga0070681_10058364 3300005458 Bacteria 3839
23 Ga0070681_10080469 3300005458 Unclassified 3214
24 Ga0070684_100030398 3300005535 Bacteria 4588
25 Ga0068853_100117636 3300005539 Bacteria 2367
26 Ga0070695_100022213 3300005545 Bacteria 3890
27 Ga0070665_100036350 3300005548 Bacteria 4954
28 Ga0070665_100057451 3300005548 Bacteria 3900
29 Ga0070665_100079810 3300005548 Bacteria 3278
30 Ga0070665_100113398 3300005548 Bacteria 2713
31 Ga0068855_100017486 3300005563 Bacteria 8623
32 Ga0068857_100060839 3300005577 Bacteria 3354
33 Ga0068856_100004463 3300005614 Bacteria 13933
34 Ga0068856_100030166 3300005614 Bacteria 5300
35 Ga0068856_100116608 3300005614 Bacteria 2671
36 Ga0068864_100007199 3300005618 Bacteria 9142
37 Ga0068864_100035165 3300005618 Unclassified 4264
38 Ga0068864_100066413 3300005618 Unclassified 3131
39 Ga0068863_100002765 3300005841 Bacteria 17379
40 Ga0068858_100020580 3300005842 Bacteria 6163
41 Ga0081455_10012086 3300005937 Bacteria 8631
42 Ga0081538_10010480 3300005981 Bacteria 7602
43 Ga0081538_10031984 3300005981 Bacteria 3537
44 Ga0081540_1008849 3300005983 Bacteria 6989
45 Ga0070717_10001998 3300006028 Bacteria 14260
46 Ga0070717_10023463 3300006028 Bacteria 4888
47 Ga0068871_100079261 3300006358 Bacteria 2717
48 Ga0075430_100056443 3300006846 Bacteria 3302
49 Ga0075431_100020038 3300006847 Bacteria 6829
50 Ga0075431_100259408 3300006847 Unclassified 1764
51 Ga0075433_10025390 3300006852 Bacteria 5008
52 Ga0075433_10032049 3300006852 Unclassified 4499
53 Ga0075434_100001324 3300006871 Bacteria 20705
54 Ga0075434_100022626 3300006871 Bacteria 6120
55 Ga0075429_100120548 3300006880 Unclassified 2293
56 Ga0105240_10001528 3300009093 Bacteria 39352
57 Ga0111539_10221580 3300009094 Bacteria 2203
58 Ga0105245_10059648 3300009098 Bacteria 3436
59 Ga0105247_10120473 3300009101 Bacteria 1699
60 Ga0114129_10015989 3300009147 Bacteria 10671
61 Ga0114129_10392615 3300009147 Bacteria 1830
62 Ga0105241_10079244 3300009174 Bacteria 2568
63 Ga0105241_10216449 3300009174 Bacteria 1607
64 Ga0105248_10010179 3300009177 Bacteria 10358
65 Ga0105237_10161054 3300009545 Bacteria 2242
66 Ga0105237_10248690 3300009545 Bacteria 1780
67 Ga0105238_10048816 3300009551 Bacteria 4265
68 Ga0105238_10077783 3300009551 Unclassified 3308
69 Ga0105238_10227253 3300009551 Unclassified 1843
70 Ga0157373_10097218 3300013100 Bacteria 2073
71 Ga0157369_10001393 3300013105 Bacteria 29688
72 Ga0157369_10003355 3300013105 Bacteria 19012
73 Ga0157369_10074986 3300013105 Bacteria 3627
74 Ga0157369_10100918 3300013105 Bacteria 3076
75 Ga0157369_10189229 3300013105 Bacteria 2163
76 Ga0157369_10309605 3300013105 Bacteria 1642
77 Ga0157374_10003830 3300013296 Bacteria 12631
78 Ga0157374_10034695 3300013296 Bacteria 4611
79 Ga0157374_10038636 3300013296 Bacteria 4388
80 Ga0157374_10095946 3300013296 Bacteria 2836
81 Ga0157374_10158110 3300013296 Bacteria 2207
82 Ga0157378_10174246 3300013297 Bacteria 2020
83 Ga0163162_10179162 3300013306 Bacteria 2245
84 Ga0157372_10063099 3300013307 Bacteria 4153
85 Ga0157372_10064412 3300013307 Bacteria 4113
86 Ga0157372_10069296 3300013307 Bacteria 3967
87 Ga0157372_10079650 3300013307 Bacteria 3705
88 Ga0157372_10120546 3300013307 Bacteria 3012
89 Ga0157372_10189324 3300013307 Unclassified 2383
90 Ga0157372_10199088 3300013307 Bacteria 2320
91 Ga0163163_10031306 3300014325 Bacteria 5134
92 Ga0163163_10038848 3300014325 Bacteria 4641
93 Ga0163163_10050612 3300014325 Bacteria 4091
94 Ga0163163_10130866 3300014325 Unclassified 2549
95 Ga0163163_10219919 3300014325 Bacteria 1948
96 Ga0157379_10024907 3300014968 Bacteria 5311
97 Ga0157379_10083158 3300014968 Bacteria 2869
98 Ga0157376_10007897 3300014969 Bacteria 7632
99 Ga0157376_10038729 3300014969 Bacteria 3881
100 Ga0157376_10086666 3300014969 Bacteria 2700
101 Ga0163161_10053886 3300017792 Bacteria 2918
102 Ga0207647_10000255 3300025904 Bacteria 43717
103 Ga0207647_10014860 3300025904 Bacteria 5354
104 Ga0207645_10018706 3300025907 Bacteria 4549
105 Ga0207705_10045901 3300025909 Bacteria 3140
106 Ga0207695_10007392 3300025913 Bacteria 14013
107 Ga0207649_10037236 3300025920 Bacteria 2937
108 Ga0207652_10021998 3300025921 Bacteria 5269
109 Ga0207652_10100342 3300025921 Bacteria 2555
110 Ga0207694_10060528 3300025924 Unclassified 2947
111 Ga0207694_10072353 3300025924 Bacteria 2695
112 Ga0207650_10012610 3300025925 Bacteria 5834
113 Ga0207700_10002904 3300025928 Bacteria 9873
114 Ga0207664_10020367 3300025929 Bacteria 4915
115 Ga0207644_10040981 3300025931 Bacteria 3274
116 Ga0207691_10004110 3300025940 Bacteria 14135
117 Ga0207711_10000032 3300025941 Bacteria 199046
118 Ga0207711_10134975 3300025941 Unclassified 2216
119 Ga0207689_10026207 3300025942 Bacteria 4883
120 Ga0207667_10004496 3300025949 Bacteria 17084
121 Ga0207667_10211314 3300025949 Bacteria 1989
122 Ga0207702_10009594 3300026078 Bacteria 8127
123 Ga0207641_10081628 3300026088 Unclassified 2808
124 Ga0207641_10155114 3300026088 Unclassified 2077
125 Ga0207641_10187226 3300026088 Bacteria 1900
126 Ga0207676_10023985 3300026095 Bacteria 4510
127 Ga0207676_10026916 3300026095 Bacteria 4278
128 Ga0207674_10045436 3300026116 Bacteria 4518
129 Ga0207683_10010165 3300026121 Bacteria 8028
130 Ga0207683_10154561 3300026121 Bacteria 2072
131 Ga0207683_10166608 3300026121 Bacteria 1994
132 Ga0268266_10029859 3300028379 Bacteria 4632
133 Ga0268266_10089146 3300028379 Unclassified 2700
134 Ga0268266_10104814 3300028379 Unclassified 2497
135 Ga0265318_10015364 3300028577 Unclassified 3187
136 Ga0265336_10018117 3300028666 Bacteria 2285
137 Ga0265338_10001260 3300028800 Bacteria 41745
138 Ga0265330_10002051 3300031235 Bacteria 11166
139 Ga0265328_10015631 3300031239 Unclassified 2968
140 Ga0265320_10031406 3300031240 Bacteria 2728
141 Ga0265325_10005499 3300031241 Bacteria 7818
142 Ga0265339_10007855 3300031249 Bacteria 6844
143 Ga0265316_10002393 3300031344 Bacteria 19533
144 Ga0265316_10178402 3300031344 Bacteria 1582
145 Ga0265313_10005451 3300031595 Bacteria 9358
146 Ga0265342_10004175 3300031712 Bacteria 11498
147 Ga0307406_10077932 3300031901 Bacteria 2194
148 Ga0307407_10084820 3300031903 Bacteria 1926
149 Ga0373955_0023420 3300035172 Unclassified 3145
150 Ga0373933_0134749 3300035724 Unclassified 1555
151 Ga0373937_0059332 3300036401 Unclassified 3516
152 Ga0373925_0064185 3300037068 Bacteria 2764
153 Ga0395900_0100640 3300037418 Unclassified 2969
154 Ga0395898_0123363 3300037466 Unclassified 2482
155 Ga0436364_0547919 3300037853 Bacteria 3225
156 Ga0466959_0056521 3300045049 Bacteria 2863
157 Ga0495603_0026218 3300046455 Unclassified 3522
158 Ga0495629_0013819 3300046459 Bacteria 5825
159 Ga0495651_0013954 3300046462 Bacteria 6213
160 Ga0495653_0016156 3300046463 Bacteria 6082
161 Ga0495650_0000009 3300046471 Bacteria 653845
162 Ga0495580_0000307 3300046472 Bacteria 39901
163 Ga0495580_0026903 3300046472 Bacteria 4189
164 Ga0495580_0081701 3300046472 Bacteria 2252
165 Ga0495664_0001710 3300046477 Bacteria 11654
166 Ga0495585_0013819 3300046492 Bacteria 4718
167 Ga0495594_0000749 3300046499 Bacteria 16639
168 Ga0495594_0001671 3300046499 Bacteria 11539
169 Ga0495594_0003908 3300046499 Bacteria 7664
170 Ga0495596_0027256 3300046500 Unclassified 2299
171 Ga0495583_0065136 3300046506 Unclassified 1615
172 Ga0495628_0041114 3300046516 Bacteria 3691
173 Ga0495631_0042880 3300046518 Unclassified 1998
174 Ga0495644_0000023 3300046523 Bacteria 79095
175 Ga0495652_0053949 3300046529 Unclassified 3425
176 Ga0495652_0089318 3300046529 Unclassified 2523
177 Ga0495665_0001601 3300046531 Bacteria 12111
178 Ga0495665_0032480 3300046531 Bacteria 2792
179 Ga0495640_0015622 3300046533 Bacteria 5705
180 Ga0495645_0131944 3300046543 Unclassified 1750
181 Ga0495622_0007969 3300046557 Bacteria 4911
182 Ga0495667_0010111 3300046559 Bacteria 6386
183 Ga0495625_0006075 3300046660 Bacteria 10839
184 Ga0495625_0049251 3300046660 Bacteria 3030
185 Ga0495635_0002407 3300046663 Bacteria 12744
186 Ga0495635_0084989 3300046663 Unclassified 2165
187 Ga0495657_0069851 3300046675 Unclassified 2297
188 Ga0495623_0008815 3300046679 Bacteria 6545
189 Ga0495646_0003667 3300046680 Bacteria 9588
190 Ga0495646_0103638 3300046680 Unclassified 1628
191 Ga0495613_0025776 3300046689 Bacteria 4381
192 Ga0495613_0192033 3300046689 Unclassified 1443
193 Ga0495600_0001271 3300046809 Bacteria 13922
194 Ga0495581_0001385 3300047315 Bacteria 13409
195 Ga0495581_0033261 3300047315 Bacteria 2985
196 Ga0495604_0129836 3300047317 Unclassified 1813
197 Ga0495674_0007881 3300047319 Bacteria 10170
198 Ga0495674_0016253 3300047319 Bacteria 6943
199 Ga0495674_0022046 3300047319 Bacteria 5878
200 Ga0495676_0004401 3300047321 Bacteria 12873
201 Ga0495683_0007541 3300047323 Bacteria 5871
202 Ga0495675_0020538 3300047444 Bacteria 4202
203 Ga0495684_0001076 3300047471 Bacteria 22103
204 Ga0495684_0023075 3300047471 Bacteria 4786
205 Ga0495684_0170937 3300047471 Unclassified 1616
206 Ga0495686_0145341 3300047472 Unclassified 1396
207 Ga0495614_0001183 3300048089 Bacteria 11191
208 Ga0496101_0081075 3300048904 Bacteria 2399
209 Ga0496104_0012722 3300048907 Bacteria 7580
210 Ga0496104_0055793 3300048907 Unclassified 3736
211 Ga0496105_0006037 3300048908 Bacteria 9264
212 Ga0496105_0175195 3300048908 Bacteria 1757
213 Ga0496109_0070073 3300048912 Bacteria 3217
214 Ga0496109_0301349 3300048912 Bacteria 1511
215 Ga0496110_0052679 3300048913 Bacteria 3576
216 Ga0496110_0108274 3300048913 Bacteria 2495
217 Ga0496112_0050087 3300048915 Bacteria 4095
218 Ga0496112_0080332 3300048915 Bacteria 3224
219 Ga0496112_0088903 3300048915 Unclassified 3057
220 Ga0496112_0181736 3300048915 Bacteria 2067
221 Ga0496113_0060441 3300048916 Bacteria 2857
222 Ga0496114_0126237 3300048917 Unclassified 2206
223 Ga0496115_0009491 3300048918 Bacteria 7228
224 Ga0496126_0002937 3300048929 Bacteria 22148
225 Ga0501031_0003485 3300049568 Bacteria 10100
226 Ga0501031_0039352 3300049568 Bacteria 3085
227 Ga0501032_0003286 3300049569 Bacteria 12443
228 Ga0501033_0004377 3300049570 Bacteria 11319
229 Ga0501033_0048346 3300049570 Bacteria 3160
230 Ga0501034_0012943 3300049571 Bacteria 8599
231 Ga0501036_0000428 3300049572 Bacteria 29869
232 Ga0501036_0035159 3300049572 Bacteria 4239
233 Ga0501037_0008205 3300049573 Bacteria 7654
234 Ga0501037_0113416 3300049573 Bacteria 1952
235 Ga0501038_0000669 3300049574 Bacteria 30504
236 Ga0501038_0037342 3300049574 Bacteria 4259
237 Ga0501039_0047180 3300049575 Bacteria 3329
238 Ga0501039_0048003 3300049575 Bacteria 3300
239 Ga0501039_0083836 3300049575 Bacteria 2482
240 Ga0501040_0010470 3300049576 Bacteria 6064
241 Ga0501040_0022231 3300049576 Bacteria 4243
242 Ga0501041_0001998 3300049577 Bacteria 11469
243 Ga0501041_0020756 3300049577 Bacteria 3930
244 Ga0501042_0011099 3300049578 Bacteria 6068
245 Ga0501042_0031330 3300049578 Bacteria 3761
246 Ga0501043_0014643 3300049579 Bacteria 6141
247 Ga0501043_0126471 3300049579 Bacteria 2004
248 Ga0501046_0000756 3300049580 Bacteria 31263
249 Ga0501048_0018017 3300049582 Bacteria 5197
250 Ga0501048_0045897 3300049582 Bacteria 3119
251 Ga0501067_0001234 3300049583 Bacteria 13903
252 Ga0501068_0000439 3300049584 Bacteria 21128
253 Ga0501069_0001138 3300049585 Bacteria 12844
254 Ga0501069_0006020 3300049585 Bacteria 6329
255 Ga0501070_0001807 3300049586 Bacteria 18861
256 Ga0501071_0070424 3300049587 Bacteria 2547
257 Ga0501072_0000247 3300049588 Bacteria 39831
258 Ga0501072_0011741 3300049588 Bacteria 6693
259 Ga0501073_0001434 3300049589 Bacteria 17631
260 Ga0501074_0038627 3300049590 Bacteria 3458
261 Ga0501074_0046175 3300049590 Bacteria 3149
262 Ga0501075_0001276 3300049591 Bacteria 16336
263 Ga0501075_0044198 3300049591 Bacteria 3341
264 Ga0501076_0026118 3300049592 Bacteria 4520
265 Ga0501076_0075203 3300049592 Bacteria 2707
266 Ga0501076_0082442 3300049592 Bacteria 2581
267 Ga0501077_0019798 3300049593 Bacteria 4256
268 Ga0501079_0000981 3300049741 Bacteria 19652
269 Ga0501079_0007570 3300049741 Bacteria 8223
270 Ga0501079_0031484 3300049741 Bacteria 4077
271 Ga0501080_0000018 3300049742 Bacteria 95463
272 Ga0501080_0020453 3300049742 Bacteria 6128
273 Ga0501081_0020366 3300049743 Bacteria 4420
274 Ga0501083_0039287 3300049744 Bacteria 3214
275 Ga0501083_0053207 3300049744 Bacteria 2718
276 Ga0501035_0057915 3300049822 Bacteria 3453
277 Ga0501044_0019262 3300049823 Bacteria 7303
278 Ga0501045_0000151 3300049824 Bacteria 37042
279 Ga0501045_0043495 3300049824 Bacteria 3270
280 nmdc:mga05p37_129402_c1 3300050507 Unclassified 3098
281 nmdc:mga06r32_217735_c1 3300050510 Unclassified 1897
282 nmdc:mga08y16_304052_c1 3300050511 Bacteria 1643
283 nmdc:mga0n895_17067_c1 3300050512 Bacteria 6683
284 nmdc:mga0n895_3821_c1 3300050512 Bacteria 12209
285 nmdc:mga0rr50_238465_c1 3300050513 Unclassified 1507
286 nmdc:mga0a205_5981_c1 3300050515 Bacteria 8571
287 nmdc:mga0a205_73717_c1 3300050515 Bacteria 3298
288 Ga0500651_0000022 3300053093 Bacteria 136412
289 Ga0500595_000007 3300053119 Bacteria 289461
290 Ga0500595_015685 3300053119 Bacteria 2839
291 Ga0500595_015885 3300053119 Bacteria 2815
292 Ga0500616_0004489 3300053153 Bacteria 9918
293 Ga0501084_0003665 3300054114 Bacteria 12470
294 Ga0501084_0167408 3300054114 Unclassified 1855
295 Ga0500661_001584 3300055283 Bacteria 4294
296 Ga0501082_0000250 3300060353 Bacteria 47230
297 Ga0501082_0002428 3300060353 Bacteria 16356
298 Ga0501082_0003812 3300060353 Bacteria 13184
299 Ga0530510_0003193 3300061734 Bacteria 11270
300 Ga0530510_0046674 3300061734 Bacteria 3129
301 2731906256 2731639228 Bacteria 4187555
302 2799186409 2799112218 Bacteria 4315149
303 Ga0105248_10000004
304 JGI24751J29686_10004161
305 rootH2_10014198
306 rootH2_10154885
307 Ga0065707_10001892
308 Ga0070658_10034017
309 Ga0070658_10046481
310 Ga0070676_10027297
311 Ga0070683_100038427
312 Ga0070683_100100432
313 Ga0070670_100075303
314 Ga0070670_100105740
315 Ga0070670_100122571
316 Ga0068869_100035651
317 Ga0070660_100024007
318 Ga0070660_100125241
319 Ga0070661_100089901
320 Ga0070671_100012436
321 Ga0070714_100004410
322 Ga0070713_100004096
323 Ga0070711_100100125
324 Ga0070681_10058364
325 Ga0070681_10080469
326 Ga0070684_100030398
327 Ga0068853_100117636
328 Ga0070695_100022213
329 Ga0070665_100036350
330 Ga0070665_100057451
331 Ga0070665_100079810
332 Ga0070665_100113398
333 Ga0068855_100017486
334 Ga0068857_100060839
335 Ga0068856_100004463
336 Ga0068856_100030166
337 Ga0068856_100116608
338 Ga0068864_100007199
339 Ga0068864_100035165
340 Ga0068864_100066413
341 Ga0068863_100002765
342 Ga0068858_100020580
343 Ga0081455_10012086
344 Ga0081538_10010480
345 Ga0081538_10031984
346 Ga0081540_1008849
347 Ga0070717_10001998
348 Ga0070717_10023463
349 Ga0068871_100079261
350 Ga0075430_100056443
351 Ga0075431_100020038
352 Ga0075431_100259408
353 Ga0075433_10025390
354 Ga0075433_10032049
355 Ga0075434_100001324
356 Ga0075434_100022626
357 Ga0075429_100120548
358 Ga0105240_10001528
359 Ga0111539_10221580
360 Ga0105245_10059648
361 Ga0105247_10120473
362 Ga0114129_10015989
363 Ga0114129_10392615
364 Ga0105241_10079244
365 Ga0105241_10216449
366 Ga0105248_10010179
367 Ga0105237_10161054
368 Ga0105237_10248690
369 Ga0105238_10048816
370 Ga0105238_10077783
371 Ga0105238_10227253
372 Ga0157373_10097218
373 Ga0157369_10001393
374 Ga0157369_10003355
375 Ga0157369_10074986
376 Ga0157369_10100918
377 Ga0157369_10189229
378 Ga0157369_10309605
379 Ga0157374_10003830
380 Ga0157374_10034695
381 Ga0157374_10038636
382 Ga0157374_10095946
383 Ga0157374_10158110
384 Ga0157378_10174246
385 Ga0163162_10179162
386 Ga0157372_10063099
387 Ga0157372_10064412
388 Ga0157372_10069296
389 Ga0157372_10079650
390 Ga0157372_10120546
391 Ga0157372_10189324
392 Ga0157372_10199088
393 Ga0163163_10031306
394 Ga0163163_10038848
395 Ga0163163_10050612
396 Ga0163163_10130866
397 Ga0163163_10219919
398 Ga0157379_10024907
399 Ga0157379_10083158
400 Ga0157376_10007897
401 Ga0157376_10038729
402 Ga0157376_10086666
403 Ga0163161_10053886
404 Ga0207647_10000255
405 Ga0207647_10014860
406 Ga0207645_10018706
407 Ga0207705_10045901
408 Ga0207695_10007392
409 Ga0207649_10037236
410 Ga0207652_10021998
411 Ga0207652_10100342
412 Ga0207694_10060528
413 Ga0207694_10072353
414 Ga0207650_10012610
415 Ga0207700_10002904
416 Ga0207664_10020367
417 Ga0207644_10040981
418 Ga0207691_10004110
419 Ga0207711_10000032
420 Ga0207711_10134975
421 Ga0207689_10026207
422 Ga0207667_10004496
423 Ga0207667_10211314
424 Ga0207702_10009594
425 Ga0207641_10081628
426 Ga0207641_10155114
427 Ga0207641_10187226
428 Ga0207676_10023985
429 Ga0207676_10026916
430 Ga0207674_10045436
431 Ga0207683_10010165
432 Ga0207683_10154561
433 Ga0207683_10166608
434 Ga0268266_10029859
435 Ga0268266_10089146
436 Ga0268266_10104814
437 Ga0265318_10015364
438 Ga0265336_10018117
439 Ga0265338_10001260
440 Ga0265330_10002051
441 Ga0265328_10015631
442 Ga0265320_10031406
443 Ga0265325_10005499
444 Ga0265339_10007855
445 Ga0265316_10002393
446 Ga0265316_10178402
447 Ga0265313_10005451
448 Ga0265342_10004175
449 Ga0307406_10077932
450 Ga0307407_10084820
451 Ga0373955_0023420
452 Ga0373933_0134749
453 Ga0373937_0059332
454 Ga0373925_0064185
455 Ga0395900_0100640
456 Ga0395898_0123363
457 Ga0436364_0547919
458 Ga0466959_0056521
459 Ga0495603_0026218
460 Ga0495629_0013819
461 Ga0495651_0013954
462 Ga0495653_0016156
463 Ga0495650_0000009
464 Ga0495580_0000307
465 Ga0495580_0026903
466 Ga0495580_0081701
467 Ga0495664_0001710
468 Ga0495585_0013819
469 Ga0495594_0000749
470 Ga0495594_0001671
471 Ga0495594_0003908
472 Ga0495596_0027256
473 Ga0495583_0065136
474 Ga0495628_0041114
475 Ga0495631_0042880
476 Ga0495644_0000023
477 Ga0495652_0053949
478 Ga0495652_0089318
479 Ga0495665_0001601
480 Ga0495665_0032480
481 Ga0495640_0015622
482 Ga0495645_0131944
483 Ga0495622_0007969
484 Ga0495667_0010111
485 Ga0495625_0006075
486 Ga0495625_0049251
487 Ga0495635_0002407
488 Ga0495635_0084989
489 Ga0495657_0069851
490 Ga0495623_0008815
491 Ga0495646_0003667
492 Ga0495646_0103638
493 Ga0495613_0025776
494 Ga0495613_0192033
495 Ga0495600_0001271
496 Ga0495581_0001385
497 Ga0495581_0033261
498 Ga0495604_0129836
499 Ga0495674_0007881
500 Ga0495674_0016253
501 Ga0495674_0022046
502 Ga0495676_0004401
503 Ga0495683_0007541
504 Ga0495675_0020538
505 Ga0495684_0001076
506 Ga0495684_0023075
507 Ga0495684_0170937
508 Ga0495686_0145341
509 Ga0495614_0001183
510 Ga0496101_0081075
511 Ga0496104_0012722
512 Ga0496104_0055793
513 Ga0496105_0006037
514 Ga0496105_0175195
515 Ga0496109_0070073
516 Ga0496109_0301349
517 Ga0496110_0052679
518 Ga0496110_0108274
519 Ga0496112_0050087
520 Ga0496112_0080332
521 Ga0496112_0088903
522 Ga0496112_0181736
523 Ga0496113_0060441
524 Ga0496114_0126237
525 Ga0496115_0009491
526 Ga0496126_0002937
527 Ga0501031_0003485
528 Ga0501031_0039352
529 Ga0501032_0003286
530 Ga0501033_0004377
531 Ga0501033_0048346
532 Ga0501034_0012943
533 Ga0501036_0000428
534 Ga0501036_0035159
535 Ga0501037_0008205
536 Ga0501037_0113416
537 Ga0501038_0000669
538 Ga0501038_0037342
539 Ga0501039_0047180
540 Ga0501039_0048003
541 Ga0501039_0083836
542 Ga0501040_0010470
543 Ga0501040_0022231
544 Ga0501041_0001998
545 Ga0501041_0020756
546 Ga0501042_0011099
547 Ga0501042_0031330
548 Ga0501043_0014643
549 Ga0501043_0126471
550 Ga0501046_0000756
551 Ga0501048_0018017
552 Ga0501048_0045897
553 Ga0501067_0001234
554 Ga0501068_0000439
555 Ga0501069_0001138
556 Ga0501069_0006020
557 Ga0501070_0001807
558 Ga0501071_0070424
559 Ga0501072_0000247
560 Ga0501072_0011741
561 Ga0501073_0001434
562 Ga0501074_0038627
563 Ga0501074_0046175
564 Ga0501075_0001276
565 Ga0501075_0044198
566 Ga0501076_0026118
567 Ga0501076_0075203
568 Ga0501076_0082442
569 Ga0501077_0019798
570 Ga0501079_0000981
571 Ga0501079_0007570
572 Ga0501079_0031484
573 Ga0501080_0000018
574 Ga0501080_0020453
575 Ga0501081_0020366
576 Ga0501083_0039287
577 Ga0501083_0053207
578 Ga0501035_0057915
579 Ga0501044_0019262
580 Ga0501045_0000151
581 Ga0501045_0043495
582 nmdc:mga05p37_129402_c1
583 nmdc:mga06r32_217735_c1
584 nmdc:mga08y16_304052_c1
585 nmdc:mga0n895_17067_c1
586 nmdc:mga0n895_3821_c1
587 nmdc:mga0rr50_238465_c1
588 nmdc:mga0a205_5981_c1
589 nmdc:mga0a205_73717_c1
590 Ga0500651_0000022
591 Ga0500595_000007
592 Ga0500595_015685
593 Ga0500595_015885
594 Ga0500616_0004489
595 Ga0501084_0003665
596 Ga0501084_0167408
597 Ga0500661_001584
598 Ga0501082_0000250
599 Ga0501082_0002428
600 Ga0501082_0003812
601 Ga0530510_0003193
602 Ga0530510_0046674
603 2731906256
604 2799186409

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01565

FAD_binding_4

FAD binding domain

76

215

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4f4q-assembly1.cif.gz_A crystal structure of m. smegmatis dpre1 in complex with fad and covalently bound btz043 0.8125 2 447
5oep-assembly2.cif.gz_B mycobacterium tuberculosis dpre1 in complex with inhibitor tca481 0.8074 2 447
4p8h-assembly1.cif.gz_A crystal structure of m. tuberculosis dpre1 in complex with the nitro-benzothiazole 6a 0.807 1 447
4f4q-assembly1.cif.gz_A crystal structure of m. smegmatis dpre1 in complex with fad and covalently bound btz043 0.8015 2 447
2vfs-assembly1.cif.gz_A alditol oxidase from streptomyces coelicolor a3(2): complex with xylitol 0.8 5 449
ID Description Score Start End Superfamily
af_P58710_75_198_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9157 71 181 3.30.465.10
af_Q4DPZ5_76_195_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9154 71 182 3.30.465.10
af_I1JS35_121_235_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9082 77 181 3.30.465.10
af_Q9HDX8_82_207_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9069 71 181 3.30.465.10
af_P9WIT3_70_193_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9003 71 181 3.30.465.10
ID Description Score Start End GO Terms
AF-E8X3T7-F1-model_v4 FAD linked oxidase domain protein 0.993 1 449 GO:0016899
GO:0071949
AF-E8X3T7-F1-model_v4 FAD linked oxidase domain protein 0.9908 1 449 GO:0016899
GO:0071949
AF-A0A7L5BXN6-F1-model_v4 FAD-binding protein 0.9763 3 449 GO:0016899
GO:0071949
AF-A0A353YF50-F1-model_v4 FAD-linked oxidase 0.9703 1 364 GO:0016899
GO:0071949
GO:0080049
AF-A0A7L5BXN6-F1-model_v4 FAD-binding protein 0.9699 3 449 GO:0016899
GO:0071949

Map