F394914

General Info

Members Datasets Scaffolds Average Seq Length
299 230 266 397

Family's Representative Sequence

Representative Sequence 3300035695|Ga0373927_0027674|Ga0373927_0027674_1921_3213
Length 430
Sequence VGAVRAVHFDIVRSRHRISALRGKPIICAEGRLIDFELPTELADLRDRVDNFIAANIVPYENDNRQGAHGASEELRRELVGLSRAAGLLSPHGPKEFGGLGLDHRSMAVVFEAAGWSTLGPLALNIQAPDEGNVNLLNVVATPEQKARWLAPLVRGEIRSVFSMTETVTDGAGSDPSLLQTIAQQMSDGFVINGRKWMITGVPEASINIVMARTLDARGVDLGATMFFVDMDAPGFRVDRMLETIDTNSPGGHAEVSFKDVHVTPDCVLGQIGEGFRNAQVRLGPARLTHCMRWLGAARRCHAIAAEYAGRRHSFGRTIGEHQGVGFMLADNEIDLHLSRLTIWHAAWLLDRHEHARDETSMSKVFCSEALSRVVDRSLQILGSIGITSDTVVERIYRDIRPFRIYDGPSEVHRHALARRIVSRNTQQRR

Samples

Sample ID Description Type Environment
1 2547132424 Nocardia nova SH22a Isolate Unclassified
2 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
3 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
4 2643221575 Microbacterium sp. Root61 Isolate Unclassified
5 2643221615 Nocardioides sp. Root224 Isolate Unclassified
6 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
7 2643221692 Nocardia sp. Root136 Isolate Unclassified
8 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
9 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
10 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
11 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
12 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
13 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
14 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
15 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
16 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
17 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
18 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
19 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
20 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
21 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
22 2922554459 Rhodococcus sp. 66b Isolate Unclassified
23 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
24 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
25 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
26 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
27 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
28 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
29 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
30 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
31 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
32 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
33 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
34 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
35 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
36 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
37 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
38 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
39 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
40 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
41 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
42 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
43 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
44 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
45 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
46 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
47 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
48 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
49 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
50 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
51 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
52 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
53 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
54 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
55 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
56 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
57 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
58 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
59 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
60 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
61 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
62 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
63 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
64 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
65 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
66 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
67 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
68 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
69 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
70 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
71 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
72 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
73 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
74 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
75 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
76 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
77 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
78 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
79 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
80 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
81 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
82 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
83 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
84 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
85 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
86 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
87 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
88 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
89 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
90 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
91 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
92 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
93 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
95 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
130 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
134 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
135 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
136 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
137 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
138 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
139 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
140 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
141 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
142 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
143 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
144 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
145 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
146 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
147 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
148 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
149 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
150 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
151 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
152 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
153 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
154 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
155 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
156 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
157 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
158 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
159 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
160 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
161 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
162 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
163 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
164 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
165 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
166 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
167 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
168 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
169 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
170 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
171 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
172 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
173 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
174 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
175 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
176 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
177 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
178 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
179 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
180 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
181 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
182 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
183 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
184 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
185 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
186 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
187 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
188 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
189 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
190 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
191 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
192 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
193 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
194 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
195 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
196 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
197 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
198 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
199 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
200 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
201 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
202 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
203 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
204 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
205 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
206 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
207 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
208 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
209 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
210 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
211 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
212 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
213 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
214 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
215 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
216 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
217 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
218 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
219 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
220 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
221 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
222 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
223 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
224 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
225 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
226 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
227 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
228 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
229 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
230 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.96
Metatranscriptomes 0
Isolates 11.04

Biome Distribution

Category Percentage (%)
Aerial Root 0.67
Bulb 0
Endosphere 8.03
Nodule 0.67
Rhizoplane 6.35
Rhizosphere 71.91
Stem 0
Stem Tuber 0
Unclassified 12.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10008507 3300002459 Bacteria 2101
2 Ga0055524_1003624 3300003775 Bacteria 7434
3 Ga0055530_10002814 3300003791 Bacteria 10706
4 Ga0055540_1000173 3300003792 Bacteria 63434
5 Ga0055531_10003721 3300003794 Bacteria 9591
6 Ga0070658_10011320 3300005327 Bacteria 7154
7 Ga0070683_100012822 3300005329 Bacteria 7295
8 Ga0068869_100013398 3300005334 Bacteria 5453
9 Ga0068868_100002638 3300005338 Bacteria 12441
10 Ga0070689_100013106 3300005340 Bacteria 5993
11 Ga0070687_100054036 3300005343 Bacteria 2091
12 Ga0070661_100038536 3300005344 Bacteria 3480
13 Ga0070675_100002587 3300005354 Bacteria 13561
14 Ga0070671_100001892 3300005355 Bacteria 15999
15 Ga0070673_100000625 3300005364 Bacteria 19367
16 Ga0070667_100001185 3300005367 Bacteria 23707
17 Ga0070667_100011775 3300005367 Bacteria 7227
18 Ga0070667_100020812 3300005367 Bacteria 5448
19 Ga0070711_100008376 3300005439 Bacteria 6332
20 Ga0070708_100000245 3300005445 Bacteria 40443
21 Ga0070708_100041344 3300005445 Bacteria 4041
22 Ga0070678_100088750 3300005456 Bacteria 2365
23 Ga0068867_100014591 3300005459 Bacteria 5567
24 Ga0068867_100053964 3300005459 Bacteria 2969
25 Ga0070706_100041555 3300005467 Bacteria 4244
26 Ga0070698_100007317 3300005471 Bacteria 11950
27 Ga0070699_100004556 3300005518 Bacteria 12272
28 Ga0068853_100140003 3300005539 Bacteria 2172
29 Ga0070672_100028139 3300005543 Bacteria 4201
30 Ga0070672_100083877 3300005543 Bacteria 2558
31 Ga0070686_100005216 3300005544 Bacteria 7176
32 Ga0070665_100086544 3300005548 Bacteria 3139
33 Ga0070665_100090492 3300005548 Bacteria 3066
34 Ga0068855_100076123 3300005563 Unclassified 3895
35 Ga0068855_100140398 3300005563 Bacteria 2755
36 Ga0070664_100042146 3300005564 Bacteria 3853
37 Ga0068856_100124669 3300005614 Bacteria 2579
38 Ga0068859_100001198 3300005617 Bacteria 26462
39 Ga0068864_100000101 3300005618 Bacteria 84095
40 Ga0068861_100122159 3300005719 Bacteria 2103
41 Ga0068863_100022863 3300005841 Bacteria 5974
42 Ga0068863_100141022 3300005841 Bacteria 2303
43 Ga0068858_100003181 3300005842 Bacteria 16410
44 Ga0068858_100012925 3300005842 Bacteria 7872
45 Ga0068860_100059469 3300005843 Bacteria 3633
46 Ga0068862_100031937 3300005844 Bacteria 4448
47 Ga0081455_10003787 3300005937 Bacteria 17259
48 Ga0070717_10142726 3300006028 Bacteria 2066
49 Ga0075363_100032838 3300006048 Bacteria 2699
50 Ga0075364_10002211 3300006051 Bacteria 10909
51 Ga0075364_10017122 3300006051 Bacteria 4522
52 Ga0070716_100025945 3300006173 Bacteria 3133
53 Ga0070712_100017441 3300006175 Bacteria 4648
54 Ga0097621_100038483 3300006237 Bacteria 3838
55 Ga0097620_100001198 3300006931 Bacteria 26462
56 Ga0079104_1000294 3300006946 Bacteria 63150
57 Ga0099794_10000092 3300007265 Bacteria 33008
58 Ga0099795_10000159 3300007788 Bacteria 11415
59 Ga0105240_10003445 3300009093 Bacteria 24554
60 Ga0105240_10050174 3300009093 Bacteria 5263
61 Ga0105240_10358362 3300009093 Bacteria 1653
62 Ga0105243_10000624 3300009148 Bacteria 35279
63 Ga0105248_10123023 3300009177 Bacteria 2927
64 Ga0105248_10135616 3300009177 Bacteria 2777
65 Ga0105249_10148456 3300009553 Bacteria 2254
66 Ga0099796_10000115 3300010159 Bacteria 12136
67 Ga0157373_10043853 3300013100 Bacteria 3194
68 Ga0163162_10000475 3300013306 Bacteria 37155
69 Ga0163162_10154203 3300013306 Bacteria 2416
70 Ga0157375_10011673 3300013308 Bacteria 7761
71 Ga0157375_10025721 3300013308 Bacteria 5476
72 Ga0157375_10048651 3300013308 Bacteria 4149
73 Ga0163163_10002589 3300014325 Bacteria 15322
74 Ga0163163_10002963 3300014325 Bacteria 14364
75 Ga0157379_10002557 3300014968 Bacteria 15259
76 Ga0157379_10011277 3300014968 Bacteria 7790
77 Ga0157379_10040131 3300014968 Bacteria 4177
78 Ga0157376_10012643 3300014969 Bacteria 6275
79 Ga0182007_10042077 3300015262 Bacteria 1521
80 Ga0209050_1001499 3300025298 Bacteria 24744
81 Ga0209050_1003722 3300025298 Bacteria 10971
82 Ga0209256_1000036 3300025299 Bacteria 386664
83 Ga0209051_1000379 3300025303 Bacteria 63486
84 Ga0209257_1000141 3300025304 Bacteria 201130
85 Ga0207656_10030638 3300025321 Bacteria 2224
86 Ga0207656_10044970 3300025321 Bacteria 1888
87 Ga0207696_1006023 3300025711 Bacteria 4949
88 Ga0207642_10011584 3300025899 Bacteria 3152
89 Ga0207680_10001448 3300025903 Bacteria 11253
90 Ga0207645_10017843 3300025907 Bacteria 4679
91 Ga0207695_10002396 3300025913 Bacteria 27790
92 Ga0207662_10069355 3300025918 Bacteria 2130
93 Ga0207657_10039730 3300025919 Bacteria 4178
94 Ga0207681_10096540 3300025923 Bacteria 2122
95 Ga0207659_10000311 3300025926 Bacteria 29520
96 Ga0207644_10005206 3300025931 Bacteria 8494
97 Ga0207690_10026564 3300025932 Bacteria 3646
98 Ga0207706_10068529 3300025933 Bacteria 3122
99 Ga0207709_10006370 3300025935 Bacteria 6626
100 Ga0207704_10091245 3300025938 Bacteria 2002
101 Ga0207691_10065206 3300025940 Bacteria 3298
102 Ga0207711_10012473 3300025941 Bacteria 7063
103 Ga0207689_10019721 3300025942 Bacteria 5681
104 Ga0207661_10186383 3300025944 Bacteria 1816
105 Ga0207667_10056732 3300025949 Unclassified 4113
106 Ga0207651_10003029 3300025960 Bacteria 8147
107 Ga0207640_10080262 3300025981 Bacteria 2226
108 Ga0207658_10002004 3300025986 Bacteria 15189
109 Ga0207658_10008018 3300025986 Bacteria 7195
110 Ga0207658_10054411 3300025986 Bacteria 2961
111 Ga0207658_10119762 3300025986 Bacteria 2096
112 Ga0207677_10001031 3300026023 Bacteria 15338
113 Ga0207703_10001963 3300026035 Bacteria 18178
114 Ga0207639_10152028 3300026041 Bacteria 1940
115 Ga0207702_10098230 3300026078 Bacteria 2579
116 Ga0207641_10034784 3300026088 Bacteria 4193
117 Ga0207641_10093054 3300026088 Bacteria 2641
118 Ga0207648_10013391 3300026089 Bacteria 7631
119 Ga0207648_10014052 3300026089 Bacteria 7411
120 Ga0207648_10037754 3300026089 Bacteria 4253
121 Ga0207676_10000430 3300026095 Bacteria 35404
122 Ga0207676_10030430 3300026095 Bacteria 4053
123 Ga0207675_100007753 3300026118 Bacteria 10130
124 Ga0207675_100053718 3300026118 Bacteria 3759
125 Ga0207675_100064384 3300026118 Bacteria 3427
126 Ga0207683_10003987 3300026121 Bacteria 12801
127 Ga0209281_1000423 3300027111 Bacteria 63126
128 Ga0209588_1000010 3300027671 Bacteria 159025
129 Ga0268266_10073081 3300028379 Bacteria 2975
130 Ga0268266_10093356 3300028379 Bacteria 2641
131 Ga0268264_10033470 3300028381 Bacteria 4222
132 Ga0268264_10044448 3300028381 Bacteria 3685
133 Ga0265338_10000560 3300028800 Bacteria 65231
134 Ga0307512_10042754 3300030522 Bacteria 3747
135 Ga0307406_10048405 3300031901 Bacteria 2685
136 Ga0307409_100023502 3300031995 Bacteria 4274
137 Ga0307416_100091414 3300032002 Bacteria 2614
138 Ga0307416_100418857 3300032002 Bacteria 1383
139 Ga0307415_100102164 3300032126 Bacteria 2106
140 Ga0307507_10006561 3300033179 Bacteria 17741
141 Ga0373926_0008355 3300035083 Bacteria 3443
142 Ga0373934_0050856 3300035086 Bacteria 1642
143 Ga0373923_0013194 3300035111 Unclassified 3074
144 Ga0373953_0061987 3300035117 Bacteria 1530
145 Ga0373943_0009294 3300035170 Bacteria 4405
146 Ga0373946_0049766 3300035171 Bacteria 1748
147 Ga0373955_0005455 3300035172 Bacteria 5716
148 Ga0373931_0070317 3300035691 Bacteria 1909
149 Ga0373935_0009731 3300035692 Bacteria 5756
150 Ga0373935_0099154 3300035692 Bacteria 1918
151 Ga0373927_0018262 3300035695 Bacteria 4610
152 Ga0373927_0027674 3300035695 Unclassified 3701
153 Ga0373927_0089175 3300035695 Bacteria 2002
154 Ga0373933_0003228 3300035724 Bacteria 9104
155 Ga0373933_0014853 3300035724 Bacteria 4334
156 Ga0373947_0011486 3300035725 Bacteria 5080
157 Ga0373937_0001917 3300036401 Bacteria 17407
158 Ga0373937_0014772 3300036401 Bacteria 6894
159 Ga0373937_0201490 3300036401 Bacteria 1871
160 Ga0373925_0001366 3300037068 Bacteria 21279
161 Ga0373925_0031338 3300037068 Bacteria 3907
162 Ga0395898_0003571 3300037466 Bacteria 17336
163 Ga0395898_0004942 3300037466 Bacteria 14468
164 Ga0395901_0005057 3300038443 Bacteria 13318
165 Ga0395901_0020758 3300038443 Bacteria 6725
166 Ga0439450_008853 3300042008 Bacteria 1891
167 Ga0495592_0012809 3300046454 Bacteria 6375
168 Ga0495629_0012802 3300046459 Bacteria 6070
169 Ga0495651_0002385 3300046462 Bacteria 14519
170 Ga0495653_0004316 3300046463 Bacteria 11503
171 Ga0495580_0019410 3300046472 Bacteria 5051
172 Ga0495582_0038804 3300046473 Bacteria 2621
173 Ga0495639_0008086 3300046475 Bacteria 4516
174 Ga0495608_0001792 3300046511 Bacteria 15335
175 Ga0495608_0043287 3300046511 Bacteria 3009
176 Ga0495618_0004775 3300046514 Bacteria 8281
177 Ga0495618_0061600 3300046514 Bacteria 2380
178 Ga0495628_0005652 3300046516 Bacteria 10945
179 Ga0495628_0098758 3300046516 Bacteria 2255
180 Ga0495630_0071704 3300046517 Bacteria 2607
181 Ga0495652_0005488 3300046529 Bacteria 11944
182 Ga0495665_0012531 3300046531 Bacteria 4589
183 Ga0495640_0008722 3300046533 Bacteria 7945
184 Ga0495640_0018054 3300046533 Bacteria 5243
185 Ga0495587_0002599 3300046536 Bacteria 12053
186 Ga0495645_0065568 3300046543 Bacteria 2627
187 Ga0495667_0003142 3300046559 Bacteria 11079
188 Ga0495668_0000203 3300046616 Bacteria 87014
189 Ga0495634_0011996 3300046642 Bacteria 6282
190 Ga0495634_0016629 3300046642 Bacteria 5257
191 Ga0495635_0001223 3300046663 Bacteria 17172
192 Ga0495635_0046674 3300046663 Bacteria 2988
193 Ga0495657_0027570 3300046675 Unclassified 4006
194 Ga0495599_0001490 3300046678 Bacteria 13449
195 Ga0495599_0125443 3300046678 Bacteria 1595
196 Ga0495623_0004383 3300046679 Bacteria 9273
197 Ga0495658_0028449 3300046683 Bacteria 3017
198 Ga0495624_0018729 3300046690 Bacteria 4627
199 Ga0495581_0007852 3300047315 Bacteria 6180
200 Ga0495581_0008867 3300047315 Bacteria 5822
201 Ga0495604_0001594 3300047317 Bacteria 18687
202 Ga0495674_0005727 3300047319 Bacteria 11908
203 Ga0495674_0094094 3300047319 Bacteria 2556
204 Ga0495680_0003900 3300047322 Bacteria 14440
205 Ga0495675_0001519 3300047444 Bacteria 14021
206 Ga0495684_0019183 3300047471 Bacteria 5264
207 Ga0495684_0052875 3300047471 Bacteria 3099
208 Ga0495593_0020074 3300047673 Bacteria 3742
209 Ga0496100_0000281 3300048903 Bacteria 25804
210 Ga0496101_0000065 3300048904 Bacteria 123942
211 Ga0496102_0005232 3300048905 Bacteria 11011
212 Ga0496103_0000156 3300048906 Bacteria 71642
213 Ga0496103_0000651 3300048906 Bacteria 26280
214 Ga0496103_0012062 3300048906 Bacteria 5134
215 Ga0496106_0000367 3300048909 Bacteria 31987
216 Ga0496106_0002985 3300048909 Bacteria 12602
217 Ga0496107_0017570 3300048910 Bacteria 5031
218 Ga0496108_0028616 3300048911 Bacteria 4611
219 Ga0496108_0085951 3300048911 Bacteria 2670
220 Ga0496109_0000256 3300048912 Bacteria 51465
221 Ga0496109_0055059 3300048912 Bacteria 3629
222 Ga0496109_0067342 3300048912 Bacteria 3280
223 Ga0496110_0087641 3300048913 Bacteria 2780
224 Ga0496110_0096238 3300048913 Bacteria 2653
225 Ga0496111_0144581 3300048914 Bacteria 1763
226 Ga0496114_0000163 3300048917 Bacteria 47096
227 Ga0496115_0098324 3300048918 Bacteria 2397
228 Ga0496116_0000458 3300048919 Bacteria 56356
229 Ga0496116_0032080 3300048919 Bacteria 3749
230 Ga0496117_0000393 3300048920 Bacteria 74647
231 Ga0496118_0000380 3300048921 Bacteria 74647
232 Ga0496118_0044752 3300048921 Bacteria 3462
233 Ga0496119_0014272 3300048922 Bacteria 6236
234 Ga0496120_0005181 3300048923 Bacteria 10524
235 Ga0496121_0000027 3300048924 Bacteria 444747
236 Ga0496121_0000118 3300048924 Bacteria 175421
237 Ga0496121_0011275 3300048924 Bacteria 9959
238 Ga0496122_0000295 3300048925 Bacteria 110220
239 Ga0496123_0004772 3300048926 Bacteria 14015
240 Ga0496124_0000016 3300048927 Bacteria 444747
241 Ga0496125_0000008 3300048928 Bacteria 704677
242 Ga0496125_0027704 3300048928 Bacteria 5129
243 Ga0496126_0000025 3300048929 Bacteria 444747
244 Ga0496126_0000917 3300048929 Bacteria 50987
245 Ga0496126_0040700 3300048929 Bacteria 4307
246 Ga0501046_0000211 3300049580 Bacteria 60684
247 Ga0501080_0027550 3300049742 Bacteria 5284
248 Ga0501083_0001698 3300049744 Bacteria 15005
249 Ga0501044_0003477 3300049823 Bacteria 17738
250 nmdc:mga03683_1975_c1 3300050489 Bacteria 5859
251 nmdc:mga03n38_36632_c1 3300050490 Bacteria 2110
252 nmdc:mga00v17_33793_c1 3300050491 Bacteria 3033
253 nmdc:mga00v17_502_c1 3300050491 Bacteria 22028
254 nmdc:mga00v17_53509_c1 3300050491 Bacteria 2460
255 nmdc:mga0yw44_5104_c1 3300050492 Bacteria 6140
256 Ga0495601_0018341 3300053077 Bacteria 4257
257 Ga0495612_0002840 3300053078 Bacteria 7171
258 Ga0495595_0007627 3300053084 Bacteria 4432
259 Ga0495619_0001029 3300053085 Bacteria 18288
260 Ga0500566_0003734 3300053094 Bacteria 9094
261 Ga0500593_000785 3300053117 Bacteria 11854
262 Ga0500595_000151 3300053119 Bacteria 45478
263 Ga0500559_0022999 3300053136 Bacteria 2645
264 Ga0500637_0000102 3300053178 Bacteria 30864
265 Ga0500661_000429 3300055283 Bacteria 7772
266 Ga0501082_0011437 3300060353 Bacteria 7637

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025711 Ga0207696_1006023 Ga0207696_10060232 332
2 3300003791 Ga0055530_10002814 Ga0055530_100028145 345
3 3300003792 Ga0055540_1000173 Ga0055540_100017349 345
4 3300003794 Ga0055531_10003721 Ga0055531_100037214 345
5 3300025298 Ga0209050_1001499 Ga0209050_10014996 345
6 3300025303 Ga0209051_1000379 Ga0209051_10003796 345
7 3300025304 Ga0209257_1000141 Ga0209257_1000141100 345
8 3300031901 Ga0307406_10048405 Ga0307406_100484052 378
9 3300031995 Ga0307409_100023502 Ga0307409_1000235022 378
10 3300032126 Ga0307415_100102164 Ga0307415_1001021642 378
11 3300033179 Ga0307507_10006561 Ga0307507_100065613 378
12 iso_pu_bacteria 2811994878 2812352421 383
13 3300003775 Ga0055524_1003624 Ga0055524_10036244 384
14 3300005445 Ga0070708_100000245 Ga0070708_1000002452 384
15 3300005518 Ga0070699_100004556 Ga0070699_1000045566 384
16 3300006946 Ga0079104_1000294 Ga0079104_100029448 384
17 3300007265 Ga0099794_10000092 Ga0099794_1000009219 384
18 3300025298 Ga0209050_1003722 Ga0209050_10037225 384
19 3300025299 Ga0209256_1000036 Ga0209256_1000036313 384
20 3300027111 Ga0209281_1000423 Ga0209281_10004236 384
21 3300027671 Ga0209588_1000010 Ga0209588_1000010109 384
22 3300028800 Ga0265338_10000560 Ga0265338_1000056015 385
23 3300006051 Ga0075364_10002211 Ga0075364_100022118 388
24 3300009093 Ga0105240_10050174 Ga0105240_100501745 388
25 3300038443 Ga0395901_0020758 Ga0395901_0020758_4355_5533 388
26 3300050491 nmdc:mga00v17_502_c1 nmdc:mga00v17_502_c1_18219_19397 388
27 iso_pu_bacteria 2984576629 2984577843 388
28 iso_pu_bacteria 2990256926 2990260186 388
29 3300053136 Ga0500559_0022999 Ga0500559_0022999_1411_2586 389
30 3300005334 Ga0068869_100013398 Ga0068869_1000133985 390
31 3300005338 Ga0068868_100002638 Ga0068868_1000026383 390
32 3300005340 Ga0070689_100013106 Ga0070689_1000131065 390
33 3300005343 Ga0070687_100054036 Ga0070687_1000540362 390
34 3300005354 Ga0070675_100002587 Ga0070675_10000258712 390
35 3300005355 Ga0070671_100001892 Ga0070671_10000189215 390
36 3300005364 Ga0070673_100000625 Ga0070673_1000006252 390
37 3300005367 Ga0070667_100011775 Ga0070667_1000117752 390
38 3300005456 Ga0070678_100088750 Ga0070678_1000887502 390
39 3300005459 Ga0068867_100014591 Ga0068867_1000145913 390
40 3300005548 Ga0070665_100086544 Ga0070665_1000865442 390
41 3300005617 Ga0068859_100001198 Ga0068859_10000119819 390
42 3300005618 Ga0068864_100000101 Ga0068864_10000010144 390
43 3300005719 Ga0068861_100122159 Ga0068861_1001221592 390
44 3300005841 Ga0068863_100022863 Ga0068863_1000228634 390
45 3300005842 Ga0068858_100012925 Ga0068858_1000129254 390
46 3300005843 Ga0068860_100059469 Ga0068860_1000594692 390
47 3300006237 Ga0097621_100038483 Ga0097621_1000384833 390
48 3300006931 Ga0097620_100001198 Ga0097620_10000119819 390
49 3300009177 Ga0105248_10123023 Ga0105248_101230232 390
50 3300009177 Ga0105248_10135616 Ga0105248_101356162 390
51 3300009553 Ga0105249_10148456 Ga0105249_101484562 390
52 3300013306 Ga0163162_10000475 Ga0163162_100004757 390
53 3300013308 Ga0157375_10025721 Ga0157375_100257213 390
54 3300014325 Ga0163163_10002963 Ga0163163_100029634 390
55 3300014968 Ga0157379_10011277 Ga0157379_100112775 390
56 3300014969 Ga0157376_10012643 Ga0157376_100126433 390
57 3300025321 Ga0207656_10030638 Ga0207656_100306382 390
58 3300025899 Ga0207642_10011584 Ga0207642_100115843 390
59 3300025903 Ga0207680_10001448 Ga0207680_100014486 390
60 3300025907 Ga0207645_10017843 Ga0207645_100178432 390
61 3300025918 Ga0207662_10069355 Ga0207662_100693552 390
62 3300025923 Ga0207681_10096540 Ga0207681_100965402 390
63 3300025926 Ga0207659_10000311 Ga0207659_1000031116 390
64 3300025931 Ga0207644_10005206 Ga0207644_100052064 390
65 3300025933 Ga0207706_10068529 Ga0207706_100685292 390
66 3300025938 Ga0207704_10091245 Ga0207704_100912452 390
67 3300025941 Ga0207711_10012473 Ga0207711_100124735 390
68 3300025942 Ga0207689_10019721 Ga0207689_100197215 390
69 3300025960 Ga0207651_10003029 Ga0207651_100030292 390
70 3300025986 Ga0207658_10002004 Ga0207658_100020046 390
71 3300026023 Ga0207677_10001031 Ga0207677_100010317 390
72 3300026035 Ga0207703_10001963 Ga0207703_100019632 390
73 3300026088 Ga0207641_10093054 Ga0207641_100930542 390
74 3300026089 Ga0207648_10037754 Ga0207648_100377542 390
75 3300026095 Ga0207676_10000430 Ga0207676_1000043018 390
76 3300026118 Ga0207675_100053718 Ga0207675_1000537182 390
77 3300026121 Ga0207683_10003987 Ga0207683_1000398711 390
78 3300028379 Ga0268266_10093356 Ga0268266_100933562 390
79 3300028381 Ga0268264_10044448 Ga0268264_100444482 390
80 3300048911 Ga0496108_0028616 Ga0496108_0028616_197_1372 390
81 3300048912 Ga0496109_0055059 Ga0496109_0055059_1917_3092 390
82 3300049823 Ga0501044_0003477 Ga0501044_0003477_2253_3431 390
83 3300050489 nmdc:mga03683_1975_c1 nmdc:mga03683_1975_c1_678_1862 390
84 3300005543 Ga0070672_100083877 Ga0070672_1000838772 391
85 3300005563 Ga0068855_100076123 Ga0068855_1000761235 391
86 3300005614 Ga0068856_100124669 Ga0068856_1001246691 391
87 3300009093 Ga0105240_10003445 Ga0105240_100034459 391
88 3300013308 Ga0157375_10048651 Ga0157375_100486512 391
89 3300014968 Ga0157379_10040131 Ga0157379_100401312 391
90 3300025913 Ga0207695_10002396 Ga0207695_1000239613 391
91 3300025940 Ga0207691_10065206 Ga0207691_100652062 391
92 3300025949 Ga0207667_10056732 Ga0207667_100567324 391
93 3300026078 Ga0207702_10098230 Ga0207702_100982303 391
94 3300026089 Ga0207648_10013391 Ga0207648_100133915 391
95 3300026118 Ga0207675_100007753 Ga0207675_1000077532 391
96 3300032002 Ga0307416_100418857 Ga0307416_1004188571 391
97 3300035083 Ga0373926_0008355 Ga0373926_0008355_1549_2742 391
98 3300035086 Ga0373934_0050856 Ga0373934_0050856_132_1325 391
99 3300035117 Ga0373953_0061987 Ga0373953_0061987_308_1501 391
100 3300035170 Ga0373943_0009294 Ga0373943_0009294_1962_3155 391
101 3300035171 Ga0373946_0049766 Ga0373946_0049766_101_1294 391
102 3300035692 Ga0373935_0009731 Ga0373935_0009731_1705_2898 391
103 3300035692 Ga0373935_0099154 Ga0373935_0099154_34_1233 391
104 3300035695 Ga0373927_0018262 Ga0373927_0018262_260_1444 391
105 3300035695 Ga0373927_0089175 Ga0373927_0089175_757_1950 391
106 3300035724 Ga0373933_0014853 Ga0373933_0014853_419_1612 391
107 3300036401 Ga0373937_0014772 Ga0373937_0014772_339_1532 391
108 3300036401 Ga0373937_0201490 Ga0373937_0201490_178_1377 391
109 3300037068 Ga0373925_0001366 Ga0373925_0001366_16032_17216 391
110 3300037068 Ga0373925_0031338 Ga0373925_0031338_1569_2768 391
111 3300037466 Ga0395898_0003571 Ga0395898_0003571_15382_16569 391
112 3300042008 Ga0439450_008853 Ga0439450_008853_582_1766 391
113 3300046472 Ga0495580_0019410 Ga0495580_0019410_1830_3023 391
114 3300046473 Ga0495582_0038804 Ga0495582_0038804_1153_2346 391
115 3300046475 Ga0495639_0008086 Ga0495639_0008086_2063_3256 391
116 3300046511 Ga0495608_0043287 Ga0495608_0043287_784_1977 391
117 3300046514 Ga0495618_0061600 Ga0495618_0061600_95_1288 391
118 3300046516 Ga0495628_0098758 Ga0495628_0098758_52_1245 391
119 3300046517 Ga0495630_0071704 Ga0495630_0071704_658_1851 391
120 3300046533 Ga0495640_0008722 Ga0495640_0008722_1896_3089 391
121 3300046543 Ga0495645_0065568 Ga0495645_0065568_85_1278 391
122 3300046642 Ga0495634_0016629 Ga0495634_0016629_2106_3299 391
123 3300046663 Ga0495635_0046674 Ga0495635_0046674_1638_2831 391
124 3300046683 Ga0495658_0028449 Ga0495658_0028449_316_1509 391
125 3300046690 Ga0495624_0018729 Ga0495624_0018729_69_1262 391
126 3300047315 Ga0495581_0007852 Ga0495581_0007852_1890_3083 391
127 3300047319 Ga0495674_0094094 Ga0495674_0094094_801_1994 391
128 3300047471 Ga0495684_0052875 Ga0495684_0052875_1578_2771 391
129 3300047673 Ga0495593_0020074 Ga0495593_0020074_941_2134 391
130 3300053094 Ga0500566_0003734 Ga0500566_0003734_6108_7301 391
131 3300053119 Ga0500595_000151 Ga0500595_000151_17919_19112 391
132 3300053178 Ga0500637_0000102 Ga0500637_0000102_1755_2948 391
133 3300055283 Ga0500661_000429 Ga0500661_000429_6513_7706 391
134 3300007788 Ga0099795_10000159 Ga0099795_100001598 392
135 3300010159 Ga0099796_10000115 Ga0099796_100001156 392
136 3300035111 Ga0373923_0013194 Ga0373923_0013194_364_1560 392
137 3300035172 Ga0373955_0005455 Ga0373955_0005455_1033_2229 392
138 3300046454 Ga0495592_0012809 Ga0495592_0012809_1501_2697 392
139 3300046459 Ga0495629_0012802 Ga0495629_0012802_1679_2875 392
140 3300046462 Ga0495651_0002385 Ga0495651_0002385_6558_7754 392
141 3300046463 Ga0495653_0004316 Ga0495653_0004316_5290_6486 392
142 3300046511 Ga0495608_0001792 Ga0495608_0001792_3904_5100 392
143 3300046516 Ga0495628_0005652 Ga0495628_0005652_1261_2457 392
144 3300046536 Ga0495587_0002599 Ga0495587_0002599_841_2037 392
145 3300046559 Ga0495667_0003142 Ga0495667_0003142_8404_9600 392
146 3300046642 Ga0495634_0011996 Ga0495634_0011996_3855_5051 392
147 3300046663 Ga0495635_0001223 Ga0495635_0001223_13146_14342 392
148 3300046675 Ga0495657_0027570 Ga0495657_0027570_509_1705 392
149 3300046679 Ga0495623_0004383 Ga0495623_0004383_5456_6652 392
150 3300047319 Ga0495674_0005727 Ga0495674_0005727_393_1589 392
151 3300047444 Ga0495675_0001519 Ga0495675_0001519_1327_2523 392
152 3300047471 Ga0495684_0019183 Ga0495684_0019183_3000_4196 392
153 3300048929 Ga0496126_0040700 Ga0496126_0040700_2103_3299 392
154 3300049580 Ga0501046_0000211 Ga0501046_0000211_41546_42751 392
155 3300053078 Ga0495612_0002840 Ga0495612_0002840_446_1642 392
156 3300053084 Ga0495595_0007627 Ga0495595_0007627_1510_2706 392
157 3300053085 Ga0495619_0001029 Ga0495619_0001029_7210_8406 392
158 iso_pu_bacteria 2862507626 2862515998 392
159 3300005459 Ga0068867_100053964 Ga0068867_1000539642 393
160 3300005937 Ga0081455_10003787 Ga0081455_100037876 393
161 3300026041 Ga0207639_10152028 Ga0207639_101520282 393
162 3300026089 Ga0207648_10014052 Ga0207648_100140523 393
163 3300035691 Ga0373931_0070317 Ga0373931_0070317_107_1306 393
164 3300035695 Ga0373927_0027674 Ga0373927_0027674_1921_3213 393
165 3300035724 Ga0373933_0003228 Ga0373933_0003228_3838_5130 393
166 3300035725 Ga0373947_0011486 Ga0373947_0011486_3283_4575 393
167 3300036401 Ga0373937_0001917 Ga0373937_0001917_11791_13083 393
168 3300046514 Ga0495618_0004775 Ga0495618_0004775_5069_6361 393
169 3300046529 Ga0495652_0005488 Ga0495652_0005488_10291_11583 393
170 3300046533 Ga0495640_0018054 Ga0495640_0018054_1921_3213 393
171 3300046678 Ga0495599_0001490 Ga0495599_0001490_1164_2456 393
172 3300047317 Ga0495604_0001594 Ga0495604_0001594_10397_11689 393
173 3300047322 Ga0495680_0003900 Ga0495680_0003900_10290_11582 393
174 3300053077 Ga0495601_0018341 Ga0495601_0018341_1313_2605 393
175 3300005327 Ga0070658_10011320 Ga0070658_100113206 394
176 3300005329 Ga0070683_100012822 Ga0070683_1000128222 394
177 3300005344 Ga0070661_100038536 Ga0070661_1000385362 394
178 3300005367 Ga0070667_100020812 Ga0070667_1000208125 394
179 3300005539 Ga0068853_100140003 Ga0068853_1001400032 394
180 3300005543 Ga0070672_100028139 Ga0070672_1000281392 394
181 3300005563 Ga0068855_100140398 Ga0068855_1001403982 394
182 3300005564 Ga0070664_100042146 Ga0070664_1000421463 394
183 3300005842 Ga0068858_100003181 Ga0068858_1000031817 394
184 3300009093 Ga0105240_10358362 Ga0105240_103583622 394
185 3300013100 Ga0157373_10043853 Ga0157373_100438532 394
186 3300013306 Ga0163162_10154203 Ga0163162_101542032 394
187 3300013308 Ga0157375_10011673 Ga0157375_100116736 394
188 3300014968 Ga0157379_10002557 Ga0157379_1000255714 394
189 3300015262 Ga0182007_10042077 Ga0182007_100420772 394
190 3300025321 Ga0207656_10044970 Ga0207656_100449702 394
191 3300025919 Ga0207657_10039730 Ga0207657_100397303 394
192 3300025932 Ga0207690_10026564 Ga0207690_100265642 394
193 3300025944 Ga0207661_10186383 Ga0207661_101863832 394
194 3300025981 Ga0207640_10080262 Ga0207640_100802622 394
195 3300025986 Ga0207658_10119762 Ga0207658_101197622 394
196 3300049742 Ga0501080_0027550 Ga0501080_0027550_111_1322 394
197 3300049744 Ga0501083_0001698 Ga0501083_0001698_12548_13759 394
198 3300050491 nmdc:mga00v17_53509_c1 nmdc:mga00v17_53509_c1_801_1991 394
199 3300050492 nmdc:mga0yw44_5104_c1 nmdc:mga0yw44_5104_c1_285_1475 394
200 3300060353 Ga0501082_0011437 Ga0501082_0011437_133_1344 394
201 iso_pu_bacteria 2547132424 2548697094 394
202 iso_pu_bacteria 2565956761 2566993250 394
203 iso_pu_bacteria 2643221692 2644517618 394
204 iso_pu_bacteria 2738541308 2738889314 394
205 iso_pu_bacteria 2738543005 2739206581 394
206 iso_pu_bacteria 2738543011 2739236848 394
207 iso_pu_bacteria 2738543034 2739362856 394
208 iso_pu_bacteria 2889300758 2889305741 394
209 iso_pu_bacteria 2904535858 2904537237 394
210 iso_pu_bacteria 2904765812 2904766304 394
211 iso_pu_bacteria 2908811453 2908816534 394
212 iso_pu_bacteria 2919420072 2919421269 394
213 iso_pu_bacteria 2919432681 2919432973 394
214 iso_pu_bacteria 2919713450 2919714351 394
215 iso_pu_bacteria 2922554459 2922559883 394
216 iso_pu_bacteria 2928142448 2928143584 394
217 iso_pu_bacteria 2939743619 2939743876 394
218 iso_pu_bacteria 2954711539 2954720824 394
219 iso_pu_bacteria 2954721474 2954730376 394
220 iso_pu_bacteria 2954731030 2954731666 394
221 iso_pu_bacteria 2954740390 2954749089 394
222 iso_pu_bacteria 2954749733 2954750376 394
223 iso_pu_bacteria 2974315732 2974318943 394
224 3300005367 Ga0070667_100001185 Ga0070667_1000011852 395
225 3300025986 Ga0207658_10008018 Ga0207658_100080183 395
226 3300037466 Ga0395898_0004942 Ga0395898_0004942_4879_6096 395
227 3300038443 Ga0395901_0005057 Ga0395901_0005057_3087_4304 395
228 3300048903 Ga0496100_0000281 Ga0496100_0000281_15047_16240 395
229 3300048904 Ga0496101_0000065 Ga0496101_0000065_37438_38631 395
230 3300048905 Ga0496102_0005232 Ga0496102_0005232_5754_6947 395
231 3300048906 Ga0496103_0000651 Ga0496103_0000651_24263_25456 395
232 3300048906 Ga0496103_0012062 Ga0496103_0012062_1251_2459 395
233 3300048909 Ga0496106_0000367 Ga0496106_0000367_26729_27922 395
234 3300048911 Ga0496108_0085951 Ga0496108_0085951_1013_2206 395
235 3300048912 Ga0496109_0000256 Ga0496109_0000256_24551_25744 395
236 3300048917 Ga0496114_0000163 Ga0496114_0000163_8334_9527 395
237 3300048919 Ga0496116_0032080 Ga0496116_0032080_566_1759 395
238 3300048921 Ga0496118_0044752 Ga0496118_0044752_1704_2897 395
239 3300048922 Ga0496119_0014272 Ga0496119_0014272_2111_3304 395
240 3300048924 Ga0496121_0000027 Ga0496121_0000027_105917_107110 395
241 3300048924 Ga0496121_0011275 Ga0496121_0011275_6125_7333 395
242 3300048925 Ga0496122_0000295 Ga0496122_0000295_32568_33761 395
243 3300048926 Ga0496123_0004772 Ga0496123_0004772_12313_13506 395
244 3300048927 Ga0496124_0000016 Ga0496124_0000016_105917_107110 395
245 3300048928 Ga0496125_0000008 Ga0496125_0000008_105917_107110 395
246 3300048929 Ga0496126_0000025 Ga0496126_0000025_105917_107110 395
247 iso_pu_bacteria 2643221575 2643887804 395
248 iso_pu_bacteria 2744054611 2744958007 395
249 3300005439 Ga0070711_100008376 Ga0070711_1000083763 396
250 3300005445 Ga0070708_100041344 Ga0070708_1000413442 396
251 3300005467 Ga0070706_100041555 Ga0070706_1000415552 396
252 3300005471 Ga0070698_100007317 Ga0070698_10000731712 396
253 3300006028 Ga0070717_10142726 Ga0070717_101427262 396
254 3300006173 Ga0070716_100025945 Ga0070716_1000259453 396
255 3300006175 Ga0070712_100017441 Ga0070712_1000174412 396
256 3300030522 Ga0307512_10042754 Ga0307512_100427543 396
257 3300032002 Ga0307416_100091414 Ga0307416_1000914142 396
258 iso_pu_bacteria 2622736605 2623498387 396
259 iso_pu_bacteria 2811994878 2812352447 396
260 3300048913 Ga0496110_0096238 Ga0496110_0096238_1400_2605 397
261 3300053117 Ga0500593_000785 Ga0500593_000785_219_1433 397
262 iso_pu_bacteria 2643221615 2644092548 397
263 iso_pu_bacteria 2643221657 2644323192 397
264 3300006048 Ga0075363_100032838 Ga0075363_1000328382 398
265 3300006051 Ga0075364_10017122 Ga0075364_100171224 398
266 3300009148 Ga0105243_10000624 Ga0105243_100006245 398
267 3300025935 Ga0207709_10006370 Ga0207709_100063702 398
268 3300046531 Ga0495665_0012531 Ga0495665_0012531_1044_2255 398
269 3300046616 Ga0495668_0000203 Ga0495668_0000203_26115_27347 398
270 3300046678 Ga0495599_0125443 Ga0495599_0125443_69_1283 398
271 3300047315 Ga0495581_0008867 Ga0495581_0008867_1537_2748 398
272 3300048928 Ga0496125_0027704 Ga0496125_0027704_3068_4300 398
273 3300050490 nmdc:mga03n38_36632_c1 nmdc:mga03n38_36632_c1_510_1739 398
274 3300050491 nmdc:mga00v17_33793_c1 nmdc:mga00v17_33793_c1_1629_2897 398
275 3300002459 JGI24751J29686_10008507 JGI24751J29686_100085072 399
276 3300005544 Ga0070686_100005216 Ga0070686_1000052163 399
277 3300005548 Ga0070665_100090492 Ga0070665_1000904923 399
278 3300005841 Ga0068863_100141022 Ga0068863_1001410222 399
279 3300005844 Ga0068862_100031937 Ga0068862_1000319372 399
280 3300014325 Ga0163163_10002589 Ga0163163_100025892 399
281 3300025986 Ga0207658_10054411 Ga0207658_100544112 399
282 3300026088 Ga0207641_10034784 Ga0207641_100347845 399
283 3300026095 Ga0207676_10030430 Ga0207676_100304304 399
284 3300026118 Ga0207675_100064384 Ga0207675_1000643844 399
285 3300028379 Ga0268266_10073081 Ga0268266_100730812 399
286 3300028381 Ga0268264_10033470 Ga0268264_100334702 399
287 3300048906 Ga0496103_0000156 Ga0496103_0000156_20032_21231 399
288 3300048909 Ga0496106_0002985 Ga0496106_0002985_2895_4094 399
289 3300048910 Ga0496107_0017570 Ga0496107_0017570_1545_2744 399
290 3300048912 Ga0496109_0067342 Ga0496109_0067342_320_1519 399
291 3300048913 Ga0496110_0087641 Ga0496110_0087641_1290_2489 399
292 3300048914 Ga0496111_0144581 Ga0496111_0144581_216_1415 399
293 3300048918 Ga0496115_0098324 Ga0496115_0098324_687_1886 399
294 3300048919 Ga0496116_0000458 Ga0496116_0000458_50412_51611 399
295 3300048920 Ga0496117_0000393 Ga0496117_0000393_50412_51611 399
296 3300048921 Ga0496118_0000380 Ga0496118_0000380_23037_24236 399
297 3300048923 Ga0496120_0005181 Ga0496120_0005181_3323_4522 399
298 3300048924 Ga0496121_0000118 Ga0496121_0000118_20796_21995 399
299 3300048929 Ga0496126_0000917 Ga0496126_0000917_4382_5581 399

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

273

422

0.99

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

288

411

0.95

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

39

157

0.89

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

161

261

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fah-assembly1.cif.gz_C molecular basis of the flavin-based electron-bifurcating caffeyl-coa reductase reaction 0.9268 6 390
3mdd-assembly1.cif.gz_A crystal structures of medium chain acyl-coa dehydrogenase from pig liver mitochondria with and without substrate 0.9178 2 394
3pfd-assembly1.cif.gz_A crystal structure of an acyl-coa dehydrogenase from mycobacterium thermoresistibile bound to reduced flavin adenine dinucleotide solved by combined iodide ion sad mr 0.9178 11 391
6fah-assembly1.cif.gz_C molecular basis of the flavin-based electron-bifurcating caffeyl-coa reductase reaction 0.9151 6 390
7p9x-assembly3.cif.gz_D structure of cyclohex-1-ene-1-carboxyl-coa dehydrogenase complexed with cyclohex-1-ene-1-carboxyl-coa 0.9137 6 391
ID Description Score Start End Superfamily
af_P96397_240_357_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9659 249 364 1.20.140.10
af_Q54IM8_267_415_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9532 252 390 1.20.140.10
af_A4HSY0_268_414_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9495 253 391 1.20.140.10
af_P96831_241_401_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9458 245 391 1.20.140.10
5jscD03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9453 252 391 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A6G3V9G9-F1-model_v4 deleted 0.9869 172 336
AF-A0A6L6XPC5-F1-model_v4 Acyl-CoA dehydrogenase 0.979 15 393 GO:0003995
GO:0005737
GO:0033539
GO:0050660
AF-X8CKK0-F1-model_v4 Acyl-CoA dehydrogenase, C-terminal domain protein 0.9732 252 398 GO:0003995
GO:0005737
GO:0033539
AF-A0A6G3V9G9-F1-model_v4 deleted 0.9695 172 336
AF-A0A2H3IFT6-F1-model_v4 Acyl-CoA oxidase/dehydrogenase, type 1 0.9662 239 372 GO:0003995

Feature Viewer

pLDDT pTM Quality
93.38 0.91 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map