F394587

General Info

Members Datasets Scaffolds Average Seq Length
298 226 596 572

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8003856774|8003860981
Length 614
Sequence RAVRAAGWLSTAAGHRLVNCQPPLLLSVAVLEELRITGLGVIEDTTLPLTGGMNVITGETGAGKTMVVTGLGLLFGGRADAGRVRAQPGRAVVEGRLRLAEPTATTVHTRVTDAGGEPDEDGTVLLSRTVTVEGRSRAHVGGRSMPVSMLAEVGEQVVAVHGQSDQLRLLRPAEQRAALDRFAGAGHEKLLAELREAYARWRHICDDLADRRRNARERNQEADLLRLGLDEITRVDPQPGEDEELKAEAQRLEHAEGLRVAAGTAYQCVAGGAEAGDDTPDVTALLGVARRTLEAQAGVDRTLADLAIRLEEAATLVGDVAAELSGYLAGLDADPARLQFIHERRAALRGLTRKYADDVDGVIVWADRARDRLSELDTSDDLLEELDRERQRLAGEVAELAARLSAARREAAARFAEQVTVELAGLAMPHARIEVAVLPRPVGRNEPSLLVDGVEVGVGPDGADEVELRLLAHPGAPSLPLQRGASGGELSRVMLAIEVVFAGSGGPPTLVFDEVDAGVGGQAAVEIGRRLARLARSHQVLVVTHLPQVAAFADRHLVVAKDTGGAVTTSGVRVVEDTERARELARMLAGLPDSDLGIAHAEELLAVAARERRP

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
44 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
45 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
53 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
56 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
64 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
75 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
108 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
110 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
111 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
112 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
113 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
114 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
115 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
116 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
117 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
118 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
119 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
122 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
123 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
124 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
125 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
126 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
127 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
128 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
129 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
130 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
131 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
132 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
133 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
134 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
135 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
136 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
137 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
138 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
139 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
140 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
141 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
142 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
143 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
144 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
145 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
146 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
147 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
148 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
149 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
154 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
155 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
156 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
157 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
158 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
159 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
160 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
161 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
162 2501939600 Micromonospora sp. L5 Isolate Unclassified
163 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
164 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
165 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
166 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
167 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
168 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
169 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
170 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
171 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
172 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
173 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
174 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
175 2739367653 Kocuria sp. OV113 Isolate Unclassified
176 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
177 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
178 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
179 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
180 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
181 2808606394 Promicromonospora sp. C35 Isolate Unclassified
182 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
183 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
184 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
185 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
186 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
187 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
188 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
189 2855683550 Micromonospora sp. RP3T Isolate Unclassified
190 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
191 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
192 2857727296 Kocuria sp. R-72562 Isolate Unclassified
193 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
194 2858868258 Micromonospora sp. MH33 Isolate Unclassified
195 2858882152 Micromonospora noduli MED15 Isolate Nodule
196 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
197 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
198 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
199 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
200 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
201 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
202 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
203 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
204 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
205 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
206 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
207 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
208 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
209 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
210 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
211 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
212 2902582711 Micromonospora sp. AP08 Isolate Unclassified
213 2920879853 Kocuria salina CV6 Isolate Unclassified
214 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
215 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
216 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
217 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
218 649633069 Micromonospora sp. L5 Isolate Unclassified
219 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
220 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
221 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
222 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
223 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
224 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
225 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere
226 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.18
Metatranscriptomes 0.67
Isolates 22.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.67
Nodule 1.68
Rhizoplane 4.7
Rhizosphere 73.49
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10009946 3300005327 Bacteria 7641
2 Ga0070676_10062920 3300005328 Bacteria 2209
3 Ga0070683_100001179 3300005329 Bacteria 19821
4 Ga0070683_100015567 3300005329 Bacteria 6685
5 Ga0070670_100011695 3300005331 Bacteria 7507
6 Ga0068869_100005670 3300005334 Bacteria 7872
7 Ga0070680_100027994 3300005336 Bacteria 4518
8 Ga0070682_100002393 3300005337 Bacteria 10396
9 Ga0068868_100002655 3300005338 Bacteria 12410
10 Ga0068868_100006044 3300005338 Bacteria 8549
11 Ga0068868_100006116 3300005338 Bacteria 8504
12 Ga0070689_100063643 3300005340 Bacteria 2870
13 Ga0070691_10005487 3300005341 Bacteria 5771
14 Ga0070661_100012588 3300005344 Bacteria 5921
15 Ga0070668_100000687 3300005347 Bacteria 23027
16 Ga0070675_100001925 3300005354 Bacteria 15354
17 Ga0070675_100016266 3300005354 Bacteria 5901
18 Ga0070671_100109343 3300005355 Bacteria 2321
19 Ga0070659_100074333 3300005366 Bacteria 2707
20 Ga0070667_100098681 3300005367 Bacteria 2520
21 Ga0070714_100071274 3300005435 Bacteria 3004
22 Ga0070713_100050406 3300005436 Bacteria 3439
23 Ga0070711_100005299 3300005439 Bacteria 7701
24 Ga0070711_100017174 3300005439 Bacteria 4605
25 Ga0070700_100010749 3300005441 Bacteria 5057
26 Ga0070700_100052370 3300005441 Bacteria 2545
27 Ga0070694_100060194 3300005444 Bacteria 2589
28 Ga0070663_100049949 3300005455 Bacteria 2973
29 Ga0070662_100006387 3300005457 Bacteria 7595
30 Ga0070681_10037854 3300005458 Bacteria 4838
31 Ga0070696_100002640 3300005546 Bacteria 11885
32 Ga0070693_100008629 3300005547 Bacteria 5038
33 Ga0070665_100020384 3300005548 Bacteria 6659
34 Ga0068855_100006565 3300005563 Bacteria 14138
35 Ga0070664_100000941 3300005564 Bacteria 22756
36 Ga0070664_100048931 3300005564 Bacteria 3574
37 Ga0068857_100105228 3300005577 Bacteria 2534
38 Ga0068856_100032171 3300005614 Bacteria 5135
39 Ga0070702_100006825 3300005615 Bacteria 5429
40 Ga0068852_100007631 3300005616 Bacteria 7913
41 Ga0068852_100018015 3300005616 Bacteria 5555
42 Ga0068864_100027600 3300005618 Bacteria 4796
43 Ga0068864_100127791 3300005618 Bacteria 2279
44 Ga0068861_100014035 3300005719 Bacteria 5617
45 Ga0068861_100056886 3300005719 Bacteria 2986
46 Ga0068870_10000833 3300005840 Bacteria 11985
47 Ga0068858_100039162 3300005842 Bacteria 4395
48 Ga0068862_100015734 3300005844 Bacteria 6288
49 Ga0068862_100078863 3300005844 Bacteria 2854
50 Ga0081455_10003297 3300005937 Bacteria 18680
51 Ga0081540_1003459 3300005983 Bacteria 12462
52 Ga0081540_1005338 3300005983 Bacteria 9617
53 Ga0081540_1017844 3300005983 Bacteria 4376
54 Ga0081539_10001349 3300005985 Bacteria 42760
55 Ga0081539_10003182 3300005985 Bacteria 20788
56 Ga0081539_10003862 3300005985 Bacteria 17560
57 Ga0081539_10013913 3300005985 Bacteria 6010
58 Ga0081539_10015332 3300005985 Bacteria 5579
59 Ga0081539_10036158 3300005985 Bacteria 2959
60 Ga0070717_10060866 3300006028 Bacteria 3127
61 Ga0075365_10002293 3300006038 Bacteria 9305
62 Ga0075432_10007874 3300006058 Bacteria 3632
63 Ga0070716_100003437 3300006173 Bacteria 7452
64 Ga0070712_100026571 3300006175 Bacteria 3858
65 Ga0097621_100003900 3300006237 Bacteria 10342
66 Ga0068871_100026052 3300006358 Bacteria 4558
67 Ga0075428_100000105 3300006844 Bacteria 70978
68 Ga0075428_100004682 3300006844 Bacteria 15146
69 Ga0075428_100028356 3300006844 Bacteria 6193
70 Ga0075430_100002292 3300006846 Bacteria 15860
71 Ga0075430_100004008 3300006846 Bacteria 12423
72 Ga0075430_100033010 3300006846 Bacteria 4394
73 Ga0075431_100003745 3300006847 Bacteria 14771
74 Ga0075431_100191748 3300006847 Bacteria 2094
75 Ga0075434_100016271 3300006871 Bacteria 7149
76 Ga0075434_100040121 3300006871 Bacteria 4637
77 Ga0075429_100001059 3300006880 Bacteria 21989
78 Ga0075429_100002370 3300006880 Bacteria 15860
79 Ga0068865_100053038 3300006881 Bacteria 2813
80 Ga0075436_100074246 3300006914 Bacteria 2354
81 Ga0075435_100015679 3300007076 Bacteria 5701
82 Ga0105245_10022592 3300009098 Bacteria 5522
83 Ga0114129_10000017 3300009147 Bacteria 126216
84 Ga0114129_10002051 3300009147 Bacteria 27655
85 Ga0114129_10004482 3300009147 Bacteria 19690
86 Ga0114129_10024110 3300009147 Bacteria 8621
87 Ga0114129_10113743 3300009147 Bacteria 3732
88 Ga0105243_10032588 3300009148 Bacteria 4027
89 Ga0105241_10037852 3300009174 Bacteria 3635
90 Ga0105242_10011103 3300009176 Bacteria 6922
91 Ga0105249_10005701 3300009553 Bacteria 10766
92 Ga0105246_10009810 3300011119 Bacteria 5905
93 Ga0105246_10011471 3300011119 Bacteria 5500
94 Ga0157373_10017371 3300013100 Bacteria 5240
95 Ga0157370_10037116 3300013104 Bacteria 4725
96 Ga0157369_10010790 3300013105 Bacteria 10402
97 Ga0157374_10026423 3300013296 Bacteria 5223
98 Ga0157374_10083072 3300013296 Bacteria 3042
99 Ga0157372_10104608 3300013307 Bacteria 3236
100 Ga0157375_10022688 3300013308 Bacteria 5779
101 Ga0157377_10006066 3300014745 Bacteria 5735
102 Ga0157377_10038067 3300014745 Bacteria 2653
103 Ga0157379_10101341 3300014968 Bacteria 2584
104 Ga0157376_10007729 3300014969 Bacteria 7701
105 Ga0157376_10075104 3300014969 Bacteria 2883
106 Ga0206353_10439534 3300020082 Bacteria 3796
107 Ga0224712_10003458 3300022467 Bacteria 4106
108 Ga0207643_10001168 3300025908 Bacteria 15615
109 Ga0207705_10030644 3300025909 Bacteria 3838
110 Ga0207654_10028392 3300025911 Bacteria 3050
111 Ga0207707_10102528 3300025912 Bacteria 2501
112 Ga0207693_10003039 3300025915 Bacteria 14506
113 Ga0207693_10036943 3300025915 Bacteria 3851
114 Ga0207663_10023779 3300025916 Bacteria 3522
115 Ga0207660_10014936 3300025917 Bacteria 5119
116 Ga0207657_10009407 3300025919 Bacteria 9825
117 Ga0207657_10029228 3300025919 Bacteria 5019
118 Ga0207649_10005263 3300025920 Bacteria 6996
119 Ga0207652_10054194 3300025921 Bacteria 3447
120 Ga0207652_10155134 3300025921 Bacteria 2051
121 Ga0207650_10002260 3300025925 Bacteria 13444
122 Ga0207659_10016648 3300025926 Bacteria 4789
123 Ga0207687_10026597 3300025927 Bacteria 3875
124 Ga0207706_10012013 3300025933 Bacteria 7890
125 Ga0207706_10035445 3300025933 Bacteria 4436
126 Ga0207670_10018609 3300025936 Bacteria 4227
127 Ga0207665_10006859 3300025939 Bacteria 7539
128 Ga0207689_10001169 3300025942 Bacteria 25272
129 Ga0207689_10019991 3300025942 Bacteria 5640
130 Ga0207661_10023420 3300025944 Bacteria 4665
131 Ga0207679_10003254 3300025945 Bacteria 10033
132 Ga0207679_10008998 3300025945 Bacteria 6382
133 Ga0207667_10054294 3300025949 Bacteria 4214
134 Ga0207668_10001826 3300025972 Bacteria 12428
135 Ga0207677_10003018 3300026023 Bacteria 8888
136 Ga0207677_10047608 3300026023 Bacteria 2880
137 Ga0207639_10013016 3300026041 Bacteria 5809
138 Ga0207678_10004558 3300026067 Bacteria 12467
139 Ga0207708_10013155 3300026075 Bacteria 6175
140 Ga0207708_10054353 3300026075 Bacteria 3053
141 Ga0207708_10085750 3300026075 Bacteria 2423
142 Ga0207702_10004684 3300026078 Bacteria 12087
143 Ga0207702_10048348 3300026078 Bacteria 3587
144 Ga0207641_10021670 3300026088 Bacteria 5279
145 Ga0207676_10034552 3300026095 Bacteria 3828
146 Ga0207674_10042933 3300026116 Bacteria 4665
147 Ga0207674_10051384 3300026116 Bacteria 4207
148 Ga0207675_100009951 3300026118 Bacteria 8902
149 Ga0207683_10001244 3300026121 Bacteria 23092
150 Ga0207683_10005976 3300026121 Bacteria 10425
151 Ga0207698_10074984 3300026142 Bacteria 2701
152 Ga0207698_10135155 3300026142 Bacteria 2115
153 Ga0207428_10034565 3300027907 Bacteria 4140
154 Ga0268265_10007596 3300028380 Bacteria 7313
155 Ga0307515_10000924 3300028794 Bacteria 67427
156 Ga0307515_10022061 3300028794 Bacteria 11247
157 Ga0307515_10037553 3300028794 Bacteria 7786
158 Ga0307515_10061572 3300028794 Bacteria 5320
159 Ga0307512_10008685 3300030522 Bacteria 9871
160 Ga0307512_10018708 3300030522 Bacteria 6323
161 Ga0314311_1009858 3300030733 Bacteria 3978
162 Ga0307513_10012858 3300031456 Bacteria 10303
163 Ga0307513_10021263 3300031456 Bacteria 7663
164 Ga0307513_10110299 3300031456 Bacteria 2747
165 Ga0307509_10025024 3300031507 Bacteria 6673
166 Ga0307508_10024420 3300031616 Bacteria 5485
167 Ga0307516_10026794 3300031730 Bacteria 5852
168 Ga0307516_10048629 3300031730 Bacteria 4173
169 Ga0307410_10002615 3300031852 Bacteria 8762
170 Ga0307410_10025638 3300031852 Bacteria 3702
171 Ga0307406_10033532 3300031901 Bacteria 3144
172 Ga0307407_10007599 3300031903 Bacteria 4919
173 Ga0307409_100006656 3300031995 Bacteria 6822
174 Ga0307409_100059953 3300031995 Bacteria 2965
175 Ga0307409_100063666 3300031995 Bacteria 2893
176 Ga0307414_10055357 3300032004 Bacteria 2777
177 Ga0307415_100006328 3300032126 Bacteria 6372
178 Ga0307415_100110865 3300032126 Bacteria 2036
179 Ga0307507_10016259 3300033179 Bacteria 8674
180 Ga0307510_10053744 3300033180 Bacteria 4229
181 Ga0373951_0006517 3300035091 Bacteria 2669
182 Ga0373962_0000410 3300035242 Bacteria 9392
183 Ga0373935_0000476 3300035692 Bacteria 20807
184 Ga0395905_0055491 3300037471 Bacteria 3707
185 Ga0395901_0003926 3300038443 Bacteria 14954
186 Ga0395901_0036458 3300038443 Bacteria 5083
187 Ga0395901_0088814 3300038443 Bacteria 3233
188 Ga0400485_05857 3300038735 Bacteria 29415
189 Ga0400486_31579 3300038742 Bacteria 26402
190 Ga0466966_0042747 3300044684 Bacteria 2907
191 Ga0466966_0057534 3300044684 Bacteria 2458
192 Ga0466961_0010928 3300044693 Bacteria 5800
193 Ga0466961_0019652 3300044693 Bacteria 4347
194 Ga0466963_0020551 3300044694 Bacteria 4151
195 Ga0466960_0069460 3300044901 Bacteria 1750
196 Ga0466967_0022202 3300045976 Bacteria 5172
197 Ga0466967_0044625 3300045976 Bacteria 3846
198 Ga0495606_0002262 3300046507 Bacteria 22840
199 Ga0495668_0000386 3300046616 Bacteria 58109
200 Ga0495625_0001172 3300046660 Bacteria 33689
201 Ga0495626_0004546 3300048091 Bacteria 8469
202 Ga0496100_0034444 3300048903 Bacteria 3178
203 Ga0496102_0026143 3300048905 Bacteria 5203
204 Ga0496102_0037321 3300048905 Bacteria 4383
205 Ga0496105_0016240 3300048908 Bacteria 5940
206 Ga0496108_0000555 3300048911 Bacteria 29286
207 Ga0496108_0031900 3300048911 Bacteria 4373
208 Ga0496108_0045357 3300048911 Bacteria 3671
209 Ga0496109_0047063 3300048912 Bacteria 3919
210 Ga0496110_0054341 3300048913 Bacteria 3522
211 Ga0496111_0033117 3300048914 Bacteria 3685
212 Ga0496112_0005256 3300048915 Bacteria 11151
213 Ga0496112_0021019 3300048915 Bacteria 6199
214 Ga0496112_0102442 3300048915 Bacteria 2833
215 Ga0496113_0103769 3300048916 Bacteria 2205
216 Ga0496121_0023270 3300048924 Bacteria 5973
217 Ga0496126_0011218 3300048929 Bacteria 9300
218 Ga0501032_0030287 3300049569 Bacteria 3713
219 Ga0501036_0078173 3300049572 Bacteria 2799
220 Ga0501039_0043735 3300049575 Bacteria 3459
221 nmdc:mga05p37_135843_c1 3300050507 Bacteria 3016
222 nmdc:mga05p37_18063_c1 3300050507 Bacteria 7864
223 nmdc:mga05p37_6457_c1 3300050507 Bacteria 13829
224 nmdc:mga05p37_709_c1 3300050507 Bacteria 37005
225 nmdc:mga09592_669_c1 3300050508 Bacteria 26222
226 nmdc:mga0qj67_1073_c1 3300050509 Bacteria 18940
227 nmdc:mga0qj67_802_c1 3300050509 Bacteria 18629
228 nmdc:mga06r32_1363_c1 3300050510 Bacteria 22077
229 nmdc:mga06r32_178884_c1 3300050510 Bacteria 2106
230 nmdc:mga0a205_59558_c1 3300050515 Bacteria 3688
231 Ga0495655_0000354 3300053083 Bacteria 8095
232 Ga0500568_0003039 3300053139 Bacteria 9594
233 8003860981 8003856774 Bacteria 7675274
234 2501941028 2501939600 Bacteria 6907073
235 2515497727 2515154088 Bacteria 5526283
236 2515722764 2515154129 Bacteria 5584369
237 2515757613 2515154137 Bacteria 5711575
238 2515855815 2515154155 Bacteria 7985436
239 2516086968 2515154202 Bacteria 5471270
240 2516092459 2515154203 Bacteria 5458536
241 2623588057 2622736626 Bacteria 7181580
242 2676476647 2675903058 Bacteria 6822861
243 2676484546 2675903059 Bacteria 8644972
244 2729904761 2728369276 Bacteria 5610032
245 2738698033 2738541272 Bacteria 6848551
246 2739327870 2738543027 Bacteria 6409078
247 2739604354 2739367653 Bacteria 2780952
248 2739609769 2739367654 Bacteria 6049412
249 2753270143 2751185782 Bacteria 11227053
250 2760303296 2758568522 Bacteria 5953541
251 2760622783 2758568621 Bacteria 5967089
252 2772643187 2772190715 Bacteria 6959372
253 2809027588 2808606394 Bacteria 6248540
254 2817509448 2816332305 Bacteria 2697803
255 2827630626 2827628540 Bacteria 6858585
256 2831939284 2831935698 Bacteria 5963223
257 2832008771 2832004796 Bacteria 6538017
258 2835189016 2835188231 Bacteria 3476928
259 2839986640 2839986021 Bacteria 3685650
260 2855672918 2855670206 Bacteria 7120389
261 2855687185 2855683550 Bacteria 7134265
262 2856862085 2856858025 Bacteria 7255264
263 2857290476 2857288857 Bacteria 7189066
264 2857729364 2857727296 Bacteria 2745552
265 2858853625 2858848962 Bacteria 6963058
266 2858872170 2858868258 Bacteria 7683772
267 2858885731 2858882152 Bacteria 7230291
268 2858893894 2858888857 Bacteria 7060307
269 2858897746 2858895516 Bacteria 7378898
270 2858908590 2858902515 Bacteria 7086037
271 2861524117 2861520306 Bacteria 8348283
272 2866070778 2866065130 Bacteria 6518152
273 2867307517 2867302475 Bacteria 7087181
274 2867317948 2867312974 Bacteria 7058875
275 2867324142 2867319477 Bacteria 7069771
276 2867510420 2867507094 Bacteria 6506033
277 2869052747 2869048445 Bacteria 6875584
278 2869063774 2869061728 Bacteria 7112407
279 2869075074 2869068681 Bacteria 7205615
280 2880491999 2880489317 Bacteria 7096270
281 2880500295 2880495981 Bacteria 7340502
282 2887486347 2887478801 Bacteria 8972725
283 2893684835 2893684298 Bacteria 2897960
284 2902586051 2902582711 Bacteria 6187705
285 2920882361 2920879853 Bacteria 4216831
286 2929222191 2929219909 Bacteria 6984360
287 2929228855 2929226422 Bacteria 7248583
288 2932432077 2932431166 Bacteria 4215299
289 2996226297 2996221748 Bacteria 6799777
290 649816166 649633069 Bacteria 6962533
291 8001785995 8001781756 Bacteria 9586736
292 8003832950 8003830390 Bacteria 6541657
293 8003876835 8003870546 Bacteria 7396674
294 8054709036 8054704163 Bacteria 7247792
295 8054730579 8054727385 Bacteria 7558670
296 8054739447 8054734606 Bacteria 6947278
297 8056581477 8056579771 Bacteria 5840325
298 8057572607 8057568493 Bacteria 7221719
299 Ga0070658_10009946
300 Ga0070676_10062920
301 Ga0070683_100001179
302 Ga0070683_100015567
303 Ga0070670_100011695
304 Ga0068869_100005670
305 Ga0070680_100027994
306 Ga0070682_100002393
307 Ga0068868_100002655
308 Ga0068868_100006044
309 Ga0068868_100006116
310 Ga0070689_100063643
311 Ga0070691_10005487
312 Ga0070661_100012588
313 Ga0070668_100000687
314 Ga0070675_100001925
315 Ga0070675_100016266
316 Ga0070671_100109343
317 Ga0070659_100074333
318 Ga0070667_100098681
319 Ga0070714_100071274
320 Ga0070713_100050406
321 Ga0070711_100005299
322 Ga0070711_100017174
323 Ga0070700_100010749
324 Ga0070700_100052370
325 Ga0070694_100060194
326 Ga0070663_100049949
327 Ga0070662_100006387
328 Ga0070681_10037854
329 Ga0070696_100002640
330 Ga0070693_100008629
331 Ga0070665_100020384
332 Ga0068855_100006565
333 Ga0070664_100000941
334 Ga0070664_100048931
335 Ga0068857_100105228
336 Ga0068856_100032171
337 Ga0070702_100006825
338 Ga0068852_100007631
339 Ga0068852_100018015
340 Ga0068864_100027600
341 Ga0068864_100127791
342 Ga0068861_100014035
343 Ga0068861_100056886
344 Ga0068870_10000833
345 Ga0068858_100039162
346 Ga0068862_100015734
347 Ga0068862_100078863
348 Ga0081455_10003297
349 Ga0081540_1003459
350 Ga0081540_1005338
351 Ga0081540_1017844
352 Ga0081539_10001349
353 Ga0081539_10003182
354 Ga0081539_10003862
355 Ga0081539_10013913
356 Ga0081539_10015332
357 Ga0081539_10036158
358 Ga0070717_10060866
359 Ga0075365_10002293
360 Ga0075432_10007874
361 Ga0070716_100003437
362 Ga0070712_100026571
363 Ga0097621_100003900
364 Ga0068871_100026052
365 Ga0075428_100000105
366 Ga0075428_100004682
367 Ga0075428_100028356
368 Ga0075430_100002292
369 Ga0075430_100004008
370 Ga0075430_100033010
371 Ga0075431_100003745
372 Ga0075431_100191748
373 Ga0075434_100016271
374 Ga0075434_100040121
375 Ga0075429_100001059
376 Ga0075429_100002370
377 Ga0068865_100053038
378 Ga0075436_100074246
379 Ga0075435_100015679
380 Ga0105245_10022592
381 Ga0114129_10000017
382 Ga0114129_10002051
383 Ga0114129_10004482
384 Ga0114129_10024110
385 Ga0114129_10113743
386 Ga0105243_10032588
387 Ga0105241_10037852
388 Ga0105242_10011103
389 Ga0105249_10005701
390 Ga0105246_10009810
391 Ga0105246_10011471
392 Ga0157373_10017371
393 Ga0157370_10037116
394 Ga0157369_10010790
395 Ga0157374_10026423
396 Ga0157374_10083072
397 Ga0157372_10104608
398 Ga0157375_10022688
399 Ga0157377_10006066
400 Ga0157377_10038067
401 Ga0157379_10101341
402 Ga0157376_10007729
403 Ga0157376_10075104
404 Ga0206353_10439534
405 Ga0224712_10003458
406 Ga0207643_10001168
407 Ga0207705_10030644
408 Ga0207654_10028392
409 Ga0207707_10102528
410 Ga0207693_10003039
411 Ga0207693_10036943
412 Ga0207663_10023779
413 Ga0207660_10014936
414 Ga0207657_10009407
415 Ga0207657_10029228
416 Ga0207649_10005263
417 Ga0207652_10054194
418 Ga0207652_10155134
419 Ga0207650_10002260
420 Ga0207659_10016648
421 Ga0207687_10026597
422 Ga0207706_10012013
423 Ga0207706_10035445
424 Ga0207670_10018609
425 Ga0207665_10006859
426 Ga0207689_10001169
427 Ga0207689_10019991
428 Ga0207661_10023420
429 Ga0207679_10003254
430 Ga0207679_10008998
431 Ga0207667_10054294
432 Ga0207668_10001826
433 Ga0207677_10003018
434 Ga0207677_10047608
435 Ga0207639_10013016
436 Ga0207678_10004558
437 Ga0207708_10013155
438 Ga0207708_10054353
439 Ga0207708_10085750
440 Ga0207702_10004684
441 Ga0207702_10048348
442 Ga0207641_10021670
443 Ga0207676_10034552
444 Ga0207674_10042933
445 Ga0207674_10051384
446 Ga0207675_100009951
447 Ga0207683_10001244
448 Ga0207683_10005976
449 Ga0207698_10074984
450 Ga0207698_10135155
451 Ga0207428_10034565
452 Ga0268265_10007596
453 Ga0307515_10000924
454 Ga0307515_10022061
455 Ga0307515_10037553
456 Ga0307515_10061572
457 Ga0307512_10008685
458 Ga0307512_10018708
459 Ga0314311_1009858
460 Ga0307513_10012858
461 Ga0307513_10021263
462 Ga0307513_10110299
463 Ga0307509_10025024
464 Ga0307508_10024420
465 Ga0307516_10026794
466 Ga0307516_10048629
467 Ga0307410_10002615
468 Ga0307410_10025638
469 Ga0307406_10033532
470 Ga0307407_10007599
471 Ga0307409_100006656
472 Ga0307409_100059953
473 Ga0307409_100063666
474 Ga0307414_10055357
475 Ga0307415_100006328
476 Ga0307415_100110865
477 Ga0307507_10016259
478 Ga0307510_10053744
479 Ga0373951_0006517
480 Ga0373962_0000410
481 Ga0373935_0000476
482 Ga0395905_0055491
483 Ga0395901_0003926
484 Ga0395901_0036458
485 Ga0395901_0088814
486 Ga0400485_05857
487 Ga0400486_31579
488 Ga0466966_0042747
489 Ga0466966_0057534
490 Ga0466961_0010928
491 Ga0466961_0019652
492 Ga0466963_0020551
493 Ga0466960_0069460
494 Ga0466967_0022202
495 Ga0466967_0044625
496 Ga0495606_0002262
497 Ga0495668_0000386
498 Ga0495625_0001172
499 Ga0495626_0004546
500 Ga0496100_0034444
501 Ga0496102_0026143
502 Ga0496102_0037321
503 Ga0496105_0016240
504 Ga0496108_0000555
505 Ga0496108_0031900
506 Ga0496108_0045357
507 Ga0496109_0047063
508 Ga0496110_0054341
509 Ga0496111_0033117
510 Ga0496112_0005256
511 Ga0496112_0021019
512 Ga0496112_0102442
513 Ga0496113_0103769
514 Ga0496121_0023270
515 Ga0496126_0011218
516 Ga0501032_0030287
517 Ga0501036_0078173
518 Ga0501039_0043735
519 nmdc:mga05p37_135843_c1
520 nmdc:mga05p37_18063_c1
521 nmdc:mga05p37_6457_c1
522 nmdc:mga05p37_709_c1
523 nmdc:mga09592_669_c1
524 nmdc:mga0qj67_1073_c1
525 nmdc:mga0qj67_802_c1
526 nmdc:mga06r32_1363_c1
527 nmdc:mga06r32_178884_c1
528 nmdc:mga0a205_59558_c1
529 Ga0495655_0000354
530 Ga0500568_0003039
531 8003860981
532 2501941028
533 2515497727
534 2515722764
535 2515757613
536 2515855815
537 2516086968
538 2516092459
539 2623588057
540 2676476647
541 2676484546
542 2729904761
543 2738698033
544 2739327870
545 2739604354
546 2739609769
547 2753270143
548 2760303296
549 2760622783
550 2772643187
551 2809027588
552 2817509448
553 2827630626
554 2831939284
555 2832008771
556 2835189016
557 2839986640
558 2855672918
559 2855687185
560 2856862085
561 2857290476
562 2857729364
563 2858853625
564 2858872170
565 2858885731
566 2858893894
567 2858897746
568 2858908590
569 2861524117
570 2866070778
571 2867307517
572 2867317948
573 2867324142
574 2867510420
575 2869052747
576 2869063774
577 2869075074
578 2880491999
579 2880500295
580 2887486347
581 2893684835
582 2902586051
583 2920882361
584 2929222191
585 2929228855
586 2932432077
587 2996226297
588 649816166
589 8001785995
590 8003832950
591 8003876835
592 8054709036
593 8054730579
594 8054739447
595 8056581477
596 8057572607

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02463

SMC_N

RecF/RecN/SMC N terminal domain

30

568

0.96

PF13476

AAA_23

AAA domain

33

255

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
4aby-assembly2.cif.gz_B crystal structure of deinococcus radiodurans recn head domain 0.8013 2 572
4aby-assembly2.cif.gz_B crystal structure of deinococcus radiodurans recn head domain 0.7929 2 572
1xex-assembly1.cif.gz_A-2 structural biochemistry of atp-driven dimerization and dna stimulated activation of smc atpases. 0.7919 2 125
1xew-assembly1.cif.gz_X structural biochemistry of atp-driven dimerization and dna stimulated activation of smc atpases. 0.7865 2 124
4aby-assembly3.cif.gz_C crystal structure of deinococcus radiodurans recn head domain 0.7834 2 572
ID Description Score Start End Superfamily
af_P0A7H0_3_104_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8498 2 117 3.40.50.300
af_Q9LFS8_23_178_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.846 3 126 3.40.50.300
af_P0A7H0_3_104_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8343 2 117 3.40.50.300
af_Q59UE8_24_182_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8329 1 126 3.40.50.300
af_A0A1D6GTS1_30_224_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8315 1 126 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A6F8YTL3-F1-model_v4 DNA repair protein RecN (Recombination protein N) 0.9681 461 581 GO:0005524
GO:0006281
GO:0006310
GO:0009432
GO:0043590
AF-A0A538PL44-F1-model_v4 DNA repair protein RecN (Recombination protein N) 0.9679 461 576 GO:0005524
GO:0006281
GO:0006310
GO:0009432
GO:0043590
AF-A0A6F8YTL3-F1-model_v4 DNA repair protein RecN (Recombination protein N) 0.9604 461 581 GO:0005524
GO:0006281
GO:0006310
GO:0009432
GO:0043590
AF-F7K175-F1-model_v4 DNA repair protein RecN (Recombination protein N) 0.956 475 577 GO:0005524
GO:0006281
GO:0006310
GO:0009432
GO:0043590
AF-A0A661X5U8-F1-model_v4 DNA repair protein RecN (Recombination protein N) 0.9538 455 578 GO:0005524
GO:0006281
GO:0006310
GO:0009432
GO:0043590

Map