F394296

General Info

Members Datasets Scaffolds Average Seq Length
298 142 596 197

Family's Representative Sequence

Representative Sequence 3300021388|Ga0213875_10011786|Ga0213875_100117864
Length 227
Sequence MTIQASVAGTSACRDAERSPAPEPAYVITYVRMLTDAASQNGLGLRIKALREAMDLSLRDLAERSGVSAPMLSQVERGETSPTLQVAKRIAAGLELRLSQLLRLDEDGAVSVVRRSDRRQGPAHIEGHSYQILTPPLPGQRAELSRHTLAPGAATGGPGDPPRHEPGSRETALVERGTVVLHCDGQRYELLDGDCVTFDADLNHHFENPGPEEAVLLAILSAGLRRS

Samples

Sample ID Description Type Environment
1 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
5 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
16 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
17 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
24 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
30 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
31 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
32 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
46 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
47 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
48 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
49 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
50 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
51 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
52 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
53 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
54 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
55 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
56 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
57 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
58 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
61 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
62 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
63 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
64 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
65 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
66 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
67 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
68 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
69 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
70 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
71 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
72 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
73 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
74 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
75 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
76 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
77 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
78 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
79 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
80 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
81 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
82 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
83 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
84 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
85 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
86 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
87 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
88 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
89 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
90 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
91 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
92 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
93 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
94 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
95 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
96 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
97 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
98 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
99 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
100 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
101 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
102 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
103 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
104 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
105 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
106 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
107 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
108 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
109 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
110 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
118 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
125 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
126 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
127 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
128 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
129 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
130 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
131 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
132 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
138 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
139 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
140 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
141 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
142 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.34
Nodule 0
Rhizoplane 3.69
Rhizosphere 79.19
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213875_10011786 3300021388 Bacteria 4338
2 Ga0070658_10295551 3300005327 Bacteria 1381
3 Ga0070660_100034369 3300005339 Bacteria 3830
4 Ga0070692_10002575 3300005345 Bacteria 7075
5 Ga0070659_100000132 3300005366 Bacteria 56931
6 Ga0070714_100000347 3300005435 Bacteria 34714
7 Ga0070714_100005669 3300005435 Bacteria 9554
8 Ga0070714_100107548 3300005435 Bacteria 2465
9 Ga0070714_100243140 3300005435 Bacteria 1661
10 Ga0070713_100023730 3300005436 Bacteria 4766
11 Ga0070713_100051009 3300005436 Bacteria 3421
12 Ga0070713_100108855 3300005436 Bacteria 2413
13 Ga0070710_10518330 3300005437 Bacteria 819
14 Ga0070711_100020404 3300005439 Bacteria 4270
15 Ga0070705_100002087 3300005440 Bacteria 10198
16 Ga0070681_10241765 3300005458 Bacteria 1719
17 Ga0070679_100770864 3300005530 Bacteria 905
18 Ga0068860_100526043 3300005843 Bacteria 1183
19 Ga0081455_10424281 3300005937 Bacteria 916
20 Ga0081538_10004677 3300005981 Bacteria 12543
21 Ga0081538_10011526 3300005981 Bacteria 7157
22 Ga0081538_10020476 3300005981 Bacteria 4864
23 Ga0081538_10031313 3300005981 Bacteria 3590
24 Ga0081540_1040921 3300005983 Bacteria 2409
25 Ga0081539_10002813 3300005985 Bacteria 23253
26 Ga0081539_10016207 3300005985 Bacteria 5343
27 Ga0081539_10043721 3300005985 Bacteria 2593
28 Ga0070717_10004362 3300006028 Bacteria 10208
29 Ga0070717_10007897 3300006028 Bacteria 7924
30 Ga0070717_10524430 3300006028 Bacteria 1072
31 Ga0070712_100415531 3300006175 Bacteria 1114
32 Ga0075430_100001517 3300006846 Bacteria 18950
33 Ga0075431_100018329 3300006847 Bacteria 7127
34 Ga0075429_100088322 3300006880 Bacteria 2702
35 Ga0075429_100275005 3300006880 Bacteria 1475
36 Ga0075429_100294223 3300006880 Bacteria 1422
37 Ga0068865_100674190 3300006881 Bacteria 881
38 Ga0075436_100272511 3300006914 Bacteria 1209
39 Ga0111539_10019012 3300009094 Bacteria 8493
40 Ga0114129_10723698 3300009147 Bacteria 1277
41 Ga0105249_11145029 3300009553 Bacteria 848
42 Ga0157372_10174184 3300013307 Bacteria 2490
43 Ga0213873_10119866 3300021358 Bacteria 771
44 Ga0213874_10000219 3300021377 Bacteria 10689
45 Ga0213874_10002711 3300021377 Bacteria 3847
46 Ga0213876_10001996 3300021384 Bacteria 12206
47 Ga0213876_10005296 3300021384 Bacteria 7098
48 Ga0213876_10010058 3300021384 Bacteria 5085
49 Ga0213876_10036868 3300021384 Bacteria 2580
50 Ga0213876_10088008 3300021384 Bacteria 1645
51 Ga0213876_10160627 3300021384 Bacteria 1195
52 Ga0213876_10417115 3300021384 Bacteria 714
53 Ga0213875_10033219 3300021388 Bacteria 2436
54 Ga0213875_10068042 3300021388 Bacteria 1663
55 Ga0207692_10000013 3300025898 Bacteria 103819
56 Ga0207699_10168724 3300025906 Bacteria 1463
57 Ga0207705_10291910 3300025909 Bacteria 1249
58 Ga0207707_10222285 3300025912 Bacteria 1644
59 Ga0207662_10341759 3300025918 Bacteria 1003
60 Ga0207657_10074659 3300025919 Bacteria 2862
61 Ga0207652_10569960 3300025921 Bacteria 1017
62 Ga0207700_10096158 3300025928 Bacteria 2351
63 Ga0207700_10107189 3300025928 Bacteria 2241
64 Ga0207700_10404067 3300025928 Bacteria 1197
65 Ga0207664_10000310 3300025929 Bacteria 36142
66 Ga0207664_10001036 3300025929 Bacteria 18631
67 Ga0207664_10023321 3300025929 Bacteria 4635
68 Ga0207664_10037291 3300025929 Bacteria 3761
69 Ga0207664_10472971 3300025929 Bacteria 1120
70 Ga0207690_10001305 3300025932 Bacteria 15653
71 Ga0207667_10386369 3300025949 Bacteria 1426
72 Ga0207708_10234631 3300026075 Bacteria 1474
73 Ga0207702_10035973 3300026078 Bacteria 4141
74 Ga0265326_10000023 3300028558 Bacteria 113142
75 Ga0265319_1003540 3300028563 Bacteria 8105
76 Ga0265334_10000135 3300028573 Bacteria 46602
77 Ga0265336_10004553 3300028666 Bacteria 5223
78 Ga0265338_10000902 3300028800 Bacteria 49948
79 Ga0265338_10092558 3300028800 Bacteria 2493
80 Ga0265324_10001427 3300029957 Bacteria 13711
81 Ga0265327_10054761 3300031251 Bacteria 2063
82 Ga0307408_100171951 3300031548 Bacteria 1730
83 Ga0307408_100552839 3300031548 Bacteria 1016
84 Ga0307405_10031288 3300031731 Bacteria 3131
85 Ga0307413_10182743 3300031824 Bacteria 1497
86 Ga0307410_10050458 3300031852 Bacteria 2798
87 Ga0307410_10169060 3300031852 Bacteria 1645
88 Ga0307410_10782508 3300031852 Bacteria 810
89 Ga0307406_10088726 3300031901 Bacteria 2075
90 Ga0307407_10006050 3300031903 Bacteria 5331
91 Ga0307407_10148120 3300031903 Bacteria 1522
92 Ga0307412_10514557 3300031911 Bacteria 999
93 Ga0307412_10598757 3300031911 Bacteria 933
94 Ga0307409_100007208 3300031995 Bacteria 6629
95 Ga0307409_100103927 3300031995 Bacteria 2364
96 Ga0307409_100135992 3300031995 Bacteria 2109
97 Ga0307409_100218730 3300031995 Bacteria 1718
98 Ga0307409_100301707 3300031995 Bacteria 1490
99 Ga0307416_100032066 3300032002 Bacteria 3965
100 Ga0307416_100049663 3300032002 Bacteria 3337
101 Ga0307414_10020357 3300032004 Bacteria 4134
102 Ga0307414_10137204 3300032004 Bacteria 1909
103 Ga0307415_100025077 3300032126 Bacteria 3735
104 Ga0307415_100036562 3300032126 Bacteria 3219
105 Ga0307415_100065953 3300032126 Bacteria 2524
106 Ga0307415_100979958 3300032126 Bacteria 784
107 Ga0307415_101099648 3300032126 Bacteria 744
108 Ga0373923_0149575 3300035111 Bacteria 1060
109 Ga0373943_0419715 3300035170 Bacteria 774
110 Ga0373955_0115000 3300035172 Bacteria 1559
111 Ga0373924_0132303 3300035410 Bacteria 1086
112 Ga0373937_0044413 3300036401 Bacteria 4058
113 Ga0395900_0019906 3300037418 Bacteria 6841
114 Ga0395900_0386642 3300037418 Bacteria 1366
115 Ga0436364_0002293 3300037853 Bacteria 5670
116 Ga0436364_0179663 3300037853 Bacteria 2990
117 Ga0436364_0200137 3300037853 Bacteria 1213
118 Ga0436364_0436029 3300037853 Bacteria 6638
119 Ga0436364_0460517 3300037853 Bacteria 7902
120 Ga0436364_0540677 3300037853 Bacteria 10501
121 Ga0436364_0570272 3300037853 Bacteria 809
122 Ga0436364_0678577 3300037853 Bacteria 4032
123 Ga0436364_0691258 3300037853 Bacteria 9089
124 Ga0436364_1176925 3300037853 Bacteria 699
125 Ga0436364_1253480 3300037853 Bacteria 848
126 Ga0436364_1377232 3300037853 Bacteria 2805
127 Ga0436364_1485362 3300037853 Bacteria 2837
128 Ga0436364_1550104 3300037853 Bacteria 2973
129 Ga0436365_0036598 3300039437 Bacteria 6645
130 Ga0436365_0146714 3300039437 Bacteria 6706
131 Ga0436365_0178175 3300039437 Bacteria 2048
132 Ga0436365_0271715 3300039437 Bacteria 1558
133 Ga0436365_0344463 3300039437 Bacteria 9149
134 Ga0436365_0666274 3300039437 Bacteria 19604
135 Ga0436365_0737277 3300039437 Bacteria 849
136 Ga0436365_1173862 3300039437 Bacteria 837
137 Ga0436365_1292596 3300039437 Bacteria 9373
138 Ga0436365_1387342 3300039437 Bacteria 1092
139 Ga0436365_1507314 3300039437 Bacteria 815
140 Ga0436365_1636267 3300039437 Bacteria 24373
141 Ga0436365_1648083 3300039437 Bacteria 6878
142 Ga0436365_1654160 3300039437 Bacteria 2291
143 Ga0436363_0016349 3300039450 Bacteria 3682
144 Ga0436363_0513295 3300039450 Bacteria 2079
145 Ga0436363_0596672 3300039450 Bacteria 1061
146 Ga0436363_0840534 3300039450 Bacteria 1910
147 Ga0436363_0920274 3300039450 Bacteria 2066
148 Ga0436363_0923038 3300039450 Bacteria 7943
149 Ga0436363_0937824 3300039450 Bacteria 4202
150 Ga0436363_1084090 3300039450 Bacteria 1268
151 Ga0436363_1171799 3300039450 Bacteria 7388
152 Ga0436363_1229755 3300039450 Bacteria 1432
153 Ga0436362_0347912 3300039453 Bacteria 1501
154 Ga0436362_0970972 3300039453 Bacteria 1230
155 Ga0436362_1223512 3300039453 Bacteria 1446
156 Ga0439460_0027074 3300042461 Bacteria 1608
157 Ga0466969_0008888 3300044656 Bacteria 5328
158 Ga0466969_0024987 3300044656 Bacteria 3072
159 Ga0466969_0071044 3300044656 Bacteria 1674
160 Ga0466969_0117509 3300044656 Bacteria 1240
161 Ga0466969_0187689 3300044656 Bacteria 945
162 Ga0466966_0006618 3300044684 Bacteria 7671
163 Ga0466966_0161874 3300044684 Bacteria 1362
164 Ga0466966_0171812 3300044684 Bacteria 1317
165 Ga0466966_0551538 3300044684 Bacteria 693
166 Ga0466961_0000571 3300044693 Bacteria 23411
167 Ga0466961_0277752 3300044693 Bacteria 1025
168 Ga0466961_0306817 3300044693 Bacteria 969
169 Ga0466961_0335373 3300044693 Bacteria 921
170 Ga0466961_0476477 3300044693 Bacteria 755
171 Ga0466963_0008369 3300044694 Bacteria 6197
172 Ga0466963_0016729 3300044694 Bacteria 4563
173 Ga0466963_0016914 3300044694 Bacteria 4542
174 Ga0466963_0056575 3300044694 Bacteria 2610
175 Ga0466963_0198048 3300044694 Bacteria 1404
176 Ga0466963_0274999 3300044694 Bacteria 1183
177 Ga0466971_0004563 3300044719 Bacteria 5989
178 Ga0466971_0009336 3300044719 Bacteria 4287
179 Ga0466971_0055514 3300044719 Bacteria 1786
180 Ga0466968_0076876 3300044735 Bacteria 1462
181 Ga0466968_0161673 3300044735 Bacteria 1034
182 Ga0466968_0281452 3300044735 Bacteria 796
183 Ga0466970_0019060 3300044765 Bacteria 3556
184 Ga0466970_0088587 3300044765 Bacteria 1678
185 Ga0466957_0026480 3300044842 Bacteria 3440
186 Ga0466957_0128481 3300044842 Bacteria 1621
187 Ga0466957_0130427 3300044842 Bacteria 1610
188 Ga0466957_0195139 3300044842 Bacteria 1328
189 Ga0466957_0252501 3300044842 Bacteria 1173
190 Ga0466957_0305938 3300044842 Bacteria 1069
191 Ga0466960_0046524 3300044901 Bacteria 2078
192 Ga0466960_0160250 3300044901 Bacteria 1207
193 Ga0466959_0003744 3300045049 Bacteria 10060
194 Ga0466959_0010557 3300045049 Bacteria 6610
195 Ga0466959_0021993 3300045049 Bacteria 4710
196 Ga0466959_0028899 3300045049 Bacteria 4108
197 Ga0466959_0052316 3300045049 Bacteria 2992
198 Ga0466959_0057551 3300045049 Bacteria 2834
199 Ga0466959_0087945 3300045049 Bacteria 2234
200 Ga0466959_0097779 3300045049 Bacteria 2103
201 Ga0466959_0153372 3300045049 Bacteria 1622
202 Ga0466959_0218528 3300045049 Bacteria 1322
203 Ga0466959_0376892 3300045049 Bacteria 966
204 Ga0466958_0001693 3300045836 Bacteria 10629
205 Ga0466958_0002570 3300045836 Bacteria 9161
206 Ga0466958_0016584 3300045836 Bacteria 4244
207 Ga0466958_0119015 3300045836 Bacteria 1652
208 Ga0466958_0127393 3300045836 Bacteria 1597
209 Ga0466958_0129188 3300045836 Bacteria 1586
210 Ga0466958_0144844 3300045836 Bacteria 1497
211 Ga0466958_0155915 3300045836 Bacteria 1441
212 Ga0466958_0760391 3300045836 Bacteria 631
213 Ga0466967_0003227 3300045976 Bacteria 10544
214 Ga0466967_0018516 3300045976 Bacteria 5569
215 Ga0466967_0028808 3300045976 Bacteria 4641
216 Ga0466967_0120806 3300045976 Bacteria 2420
217 Ga0466967_0252059 3300045976 Bacteria 1686
218 Ga0466967_0640101 3300045976 Bacteria 1051
219 Ga0466967_0982163 3300045976 Bacteria 841
220 Ga0466967_1089188 3300045976 Bacteria 796
221 Ga0495592_0170793 3300046454 Bacteria 1489
222 Ga0495651_0385895 3300046462 Bacteria 917
223 Ga0495653_0140872 3300046463 Bacteria 1696
224 Ga0495664_0087218 3300046477 Bacteria 1875
225 Ga0495664_0150854 3300046477 Bacteria 1410
226 Ga0495608_0015792 3300046511 Bacteria 5225
227 Ga0495618_0041448 3300046514 Bacteria 2900
228 Ga0495628_0043753 3300046516 Bacteria 3565
229 Ga0495652_0150635 3300046529 Bacteria 1818
230 Ga0495640_0164783 3300046533 Bacteria 1418
231 Ga0495586_0138283 3300046535 Bacteria 1366
232 Ga0495587_0049395 3300046536 Bacteria 2490
233 Ga0495667_0114503 3300046559 Bacteria 1742
234 Ga0495634_0329207 3300046642 Bacteria 918
235 Ga0495635_0077102 3300046663 Bacteria 2283
236 Ga0495657_0046012 3300046675 Bacteria 2958
237 Ga0495623_0202993 3300046679 Bacteria 1139
238 Ga0495646_0046095 3300046680 Bacteria 2660
239 Ga0495600_0018459 3300046809 Bacteria 4445
240 Ga0495604_0190418 3300047317 Bacteria 1430
241 Ga0495604_0644024 3300047317 Bacteria 676
242 Ga0495674_0200992 3300047319 Bacteria 1653
243 Ga0495674_0516085 3300047319 Bacteria 954
244 Ga0495680_0015816 3300047322 Bacteria 6495
245 Ga0495675_0039097 3300047444 Bacteria 3021
246 Ga0495684_0030033 3300047471 Bacteria 4173
247 Ga0495684_0048104 3300047471 Bacteria 3261
248 Ga0495602_0006880 3300048088 Bacteria 11952
249 Ga0496101_0073964 3300048904 Bacteria 2504
250 Ga0496102_0658688 3300048905 Bacteria 970
251 Ga0496105_0756987 3300048908 Bacteria 741
252 Ga0496108_0413291 3300048911 Bacteria 1178
253 Ga0496108_1100512 3300048911 Bacteria 675
254 Ga0496109_0531037 3300048912 Bacteria 1110
255 Ga0496110_0121142 3300048913 Bacteria 2357
256 Ga0496112_0011872 3300048915 Bacteria 7978
257 Ga0496112_0779601 3300048915 Bacteria 881
258 Ga0496113_0013063 3300048916 Bacteria 5607
259 Ga0496115_0080386 3300048918 Bacteria 2654
260 Ga0501036_0160661 3300049572 Bacteria 1894
261 Ga0501036_0227086 3300049572 Bacteria 1567
262 Ga0501038_0350765 3300049574 Bacteria 1149
263 Ga0501038_0420730 3300049574 Bacteria 1031
264 Ga0501039_0350906 3300049575 Bacteria 1159
265 Ga0501042_0124449 3300049578 Bacteria 1856
266 Ga0501042_0384940 3300049578 Bacteria 1016
267 Ga0501043_0278376 3300049579 Bacteria 1283
268 Ga0501067_0228504 3300049583 Bacteria 1036
269 Ga0501071_0881335 3300049587 Bacteria 690
270 Ga0501072_0282078 3300049588 Bacteria 1321
271 Ga0501072_0386438 3300049588 Bacteria 1111
272 Ga0501076_0050645 3300049592 Bacteria 3286
273 Ga0501079_0180152 3300049741 Bacteria 1649
274 Ga0501080_0099318 3300049742 Bacteria 2701
275 Ga0501080_0474820 3300049742 Bacteria 1119
276 Ga0501081_0076679 3300049743 Bacteria 2335
277 Ga0501045_0110352 3300049824 Bacteria 2039
278 Ga0501045_0376932 3300049824 Bacteria 1056
279 nmdc:mga0yw44_676248_c1 3300050492 Bacteria 701
280 nmdc:mga05p37_320402_c1 3300050507 Bacteria 1835
281 nmdc:mga05p37_394141_c1 3300050507 Bacteria 1618
282 nmdc:mga09592_25265_c1 3300050508 Bacteria 4915
283 nmdc:mga09592_410136_c1 3300050508 Bacteria 1171
284 nmdc:mga09592_86796_c1 3300050508 Bacteria 2670
285 nmdc:mga0qj67_44004_c1 3300050509 Bacteria 3517
286 nmdc:mga06r32_2376_c1 3300050510 Bacteria 16856
287 nmdc:mga06r32_356291_c1 3300050510 Bacteria 1447
288 nmdc:mga08x19_383047_c1 3300050514 Bacteria 985
289 Ga0495601_0208513 3300053077 Bacteria 1277
290 Ga0495619_0207240 3300053085 Bacteria 1357
291 Ga0495619_0487012 3300053085 Bacteria 849
292 Ga0501082_1785387 3300060353 Bacteria 536
293 Ga0466962_0016208 3300061719 Bacteria 3595
294 Ga0466962_0026538 3300061719 Bacteria 2781
295 Ga0466962_0089176 3300061719 Bacteria 1477
296 Ga0466962_0346841 3300061719 Bacteria 739
297 Ga0466962_0357999 3300061719 Bacteria 727
298 Ga0530510_0047702 3300061734 Bacteria 3095
299 Ga0213875_10011786
300 Ga0070658_10295551
301 Ga0070660_100034369
302 Ga0070692_10002575
303 Ga0070659_100000132
304 Ga0070714_100000347
305 Ga0070714_100005669
306 Ga0070714_100107548
307 Ga0070714_100243140
308 Ga0070713_100023730
309 Ga0070713_100051009
310 Ga0070713_100108855
311 Ga0070710_10518330
312 Ga0070711_100020404
313 Ga0070705_100002087
314 Ga0070681_10241765
315 Ga0070679_100770864
316 Ga0068860_100526043
317 Ga0081455_10424281
318 Ga0081538_10004677
319 Ga0081538_10011526
320 Ga0081538_10020476
321 Ga0081538_10031313
322 Ga0081540_1040921
323 Ga0081539_10002813
324 Ga0081539_10016207
325 Ga0081539_10043721
326 Ga0070717_10004362
327 Ga0070717_10007897
328 Ga0070717_10524430
329 Ga0070712_100415531
330 Ga0075430_100001517
331 Ga0075431_100018329
332 Ga0075429_100088322
333 Ga0075429_100275005
334 Ga0075429_100294223
335 Ga0068865_100674190
336 Ga0075436_100272511
337 Ga0111539_10019012
338 Ga0114129_10723698
339 Ga0105249_11145029
340 Ga0157372_10174184
341 Ga0213873_10119866
342 Ga0213874_10000219
343 Ga0213874_10002711
344 Ga0213876_10001996
345 Ga0213876_10005296
346 Ga0213876_10010058
347 Ga0213876_10036868
348 Ga0213876_10088008
349 Ga0213876_10160627
350 Ga0213876_10417115
351 Ga0213875_10033219
352 Ga0213875_10068042
353 Ga0207692_10000013
354 Ga0207699_10168724
355 Ga0207705_10291910
356 Ga0207707_10222285
357 Ga0207662_10341759
358 Ga0207657_10074659
359 Ga0207652_10569960
360 Ga0207700_10096158
361 Ga0207700_10107189
362 Ga0207700_10404067
363 Ga0207664_10000310
364 Ga0207664_10001036
365 Ga0207664_10023321
366 Ga0207664_10037291
367 Ga0207664_10472971
368 Ga0207690_10001305
369 Ga0207667_10386369
370 Ga0207708_10234631
371 Ga0207702_10035973
372 Ga0265326_10000023
373 Ga0265319_1003540
374 Ga0265334_10000135
375 Ga0265336_10004553
376 Ga0265338_10000902
377 Ga0265338_10092558
378 Ga0265324_10001427
379 Ga0265327_10054761
380 Ga0307408_100171951
381 Ga0307408_100552839
382 Ga0307405_10031288
383 Ga0307413_10182743
384 Ga0307410_10050458
385 Ga0307410_10169060
386 Ga0307410_10782508
387 Ga0307406_10088726
388 Ga0307407_10006050
389 Ga0307407_10148120
390 Ga0307412_10514557
391 Ga0307412_10598757
392 Ga0307409_100007208
393 Ga0307409_100103927
394 Ga0307409_100135992
395 Ga0307409_100218730
396 Ga0307409_100301707
397 Ga0307416_100032066
398 Ga0307416_100049663
399 Ga0307414_10020357
400 Ga0307414_10137204
401 Ga0307415_100025077
402 Ga0307415_100036562
403 Ga0307415_100065953
404 Ga0307415_100979958
405 Ga0307415_101099648
406 Ga0373923_0149575
407 Ga0373943_0419715
408 Ga0373955_0115000
409 Ga0373924_0132303
410 Ga0373937_0044413
411 Ga0395900_0019906
412 Ga0395900_0386642
413 Ga0436364_0002293
414 Ga0436364_0179663
415 Ga0436364_0200137
416 Ga0436364_0436029
417 Ga0436364_0460517
418 Ga0436364_0540677
419 Ga0436364_0570272
420 Ga0436364_0678577
421 Ga0436364_0691258
422 Ga0436364_1176925
423 Ga0436364_1253480
424 Ga0436364_1377232
425 Ga0436364_1485362
426 Ga0436364_1550104
427 Ga0436365_0036598
428 Ga0436365_0146714
429 Ga0436365_0178175
430 Ga0436365_0271715
431 Ga0436365_0344463
432 Ga0436365_0666274
433 Ga0436365_0737277
434 Ga0436365_1173862
435 Ga0436365_1292596
436 Ga0436365_1387342
437 Ga0436365_1507314
438 Ga0436365_1636267
439 Ga0436365_1648083
440 Ga0436365_1654160
441 Ga0436363_0016349
442 Ga0436363_0513295
443 Ga0436363_0596672
444 Ga0436363_0840534
445 Ga0436363_0920274
446 Ga0436363_0923038
447 Ga0436363_0937824
448 Ga0436363_1084090
449 Ga0436363_1171799
450 Ga0436363_1229755
451 Ga0436362_0347912
452 Ga0436362_0970972
453 Ga0436362_1223512
454 Ga0439460_0027074
455 Ga0466969_0008888
456 Ga0466969_0024987
457 Ga0466969_0071044
458 Ga0466969_0117509
459 Ga0466969_0187689
460 Ga0466966_0006618
461 Ga0466966_0161874
462 Ga0466966_0171812
463 Ga0466966_0551538
464 Ga0466961_0000571
465 Ga0466961_0277752
466 Ga0466961_0306817
467 Ga0466961_0335373
468 Ga0466961_0476477
469 Ga0466963_0008369
470 Ga0466963_0016729
471 Ga0466963_0016914
472 Ga0466963_0056575
473 Ga0466963_0198048
474 Ga0466963_0274999
475 Ga0466971_0004563
476 Ga0466971_0009336
477 Ga0466971_0055514
478 Ga0466968_0076876
479 Ga0466968_0161673
480 Ga0466968_0281452
481 Ga0466970_0019060
482 Ga0466970_0088587
483 Ga0466957_0026480
484 Ga0466957_0128481
485 Ga0466957_0130427
486 Ga0466957_0195139
487 Ga0466957_0252501
488 Ga0466957_0305938
489 Ga0466960_0046524
490 Ga0466960_0160250
491 Ga0466959_0003744
492 Ga0466959_0010557
493 Ga0466959_0021993
494 Ga0466959_0028899
495 Ga0466959_0052316
496 Ga0466959_0057551
497 Ga0466959_0087945
498 Ga0466959_0097779
499 Ga0466959_0153372
500 Ga0466959_0218528
501 Ga0466959_0376892
502 Ga0466958_0001693
503 Ga0466958_0002570
504 Ga0466958_0016584
505 Ga0466958_0119015
506 Ga0466958_0127393
507 Ga0466958_0129188
508 Ga0466958_0144844
509 Ga0466958_0155915
510 Ga0466958_0760391
511 Ga0466967_0003227
512 Ga0466967_0018516
513 Ga0466967_0028808
514 Ga0466967_0120806
515 Ga0466967_0252059
516 Ga0466967_0640101
517 Ga0466967_0982163
518 Ga0466967_1089188
519 Ga0495592_0170793
520 Ga0495651_0385895
521 Ga0495653_0140872
522 Ga0495664_0087218
523 Ga0495664_0150854
524 Ga0495608_0015792
525 Ga0495618_0041448
526 Ga0495628_0043753
527 Ga0495652_0150635
528 Ga0495640_0164783
529 Ga0495586_0138283
530 Ga0495587_0049395
531 Ga0495667_0114503
532 Ga0495634_0329207
533 Ga0495635_0077102
534 Ga0495657_0046012
535 Ga0495623_0202993
536 Ga0495646_0046095
537 Ga0495600_0018459
538 Ga0495604_0190418
539 Ga0495604_0644024
540 Ga0495674_0200992
541 Ga0495674_0516085
542 Ga0495680_0015816
543 Ga0495675_0039097
544 Ga0495684_0030033
545 Ga0495684_0048104
546 Ga0495602_0006880
547 Ga0496101_0073964
548 Ga0496102_0658688
549 Ga0496105_0756987
550 Ga0496108_0413291
551 Ga0496108_1100512
552 Ga0496109_0531037
553 Ga0496110_0121142
554 Ga0496112_0011872
555 Ga0496112_0779601
556 Ga0496113_0013063
557 Ga0496115_0080386
558 Ga0501036_0160661
559 Ga0501036_0227086
560 Ga0501038_0350765
561 Ga0501038_0420730
562 Ga0501039_0350906
563 Ga0501042_0124449
564 Ga0501042_0384940
565 Ga0501043_0278376
566 Ga0501067_0228504
567 Ga0501071_0881335
568 Ga0501072_0282078
569 Ga0501072_0386438
570 Ga0501076_0050645
571 Ga0501079_0180152
572 Ga0501080_0099318
573 Ga0501080_0474820
574 Ga0501081_0076679
575 Ga0501045_0110352
576 Ga0501045_0376932
577 nmdc:mga0yw44_676248_c1
578 nmdc:mga05p37_320402_c1
579 nmdc:mga05p37_394141_c1
580 nmdc:mga09592_25265_c1
581 nmdc:mga09592_410136_c1
582 nmdc:mga09592_86796_c1
583 nmdc:mga0qj67_44004_c1
584 nmdc:mga06r32_2376_c1
585 nmdc:mga06r32_356291_c1
586 nmdc:mga08x19_383047_c1
587 Ga0495601_0208513
588 Ga0495619_0207240
589 Ga0495619_0487012
590 Ga0501082_1785387
591 Ga0466962_0016208
592 Ga0466962_0026538
593 Ga0466962_0089176
594 Ga0466962_0346841
595 Ga0466962_0357999
596 Ga0530510_0047702

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01381

HTH_3

Helix-turn-helix

47

101

0.95

PF13443

HTH_26

Cro/C1-type HTH DNA-binding domain

46

107

0.94

PF13560

HTH_31

Helix-turn-helix domain

43

104

0.93

PF02311

AraC_binding

AraC-like ligand binding domain

160

221

0.86

PF07883

Cupin_2

Cupin domain

145

220

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
2xcj-assembly1.cif.gz_B crystal structure of p2 c, the immunity repressor of temperate e. coli phage p2 0.958 13 61
4yba-assembly1.cif.gz_A the structure of the c.kpn2i controller protein 0.9386 17 65
6b8w-assembly1.cif.gz_B 1.9 angstrom resolution crystal structure of cupin_2 domain (pfam 07883) of xre family transcriptional regulator from enterobacter cloacae. 0.9251 94 189
1y7y-assembly1.cif.gz_B high-resolution crystal structure of the restriction-modification controller protein c.ahdi from aeromonas hydrophila 0.924 11 71
5woq-assembly2.cif.gz_C crystal structure of an xre family protein transcriptional regulator from mycobacterium smegmatis 0.9218 12 73
ID Description Score Start End Superfamily
2xcjB00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.958 13 61 1.10.260.40
4ybaA00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9386 17 65 1.10.260.40
5woqB00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.937 12 73 1.10.260.40
2l49B01 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9293 14 60 1.10.260.40
1y7yB00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.924 11 71 1.10.260.40
ID Description Score Start End GO Terms
AF-A0A3A0V372-F1-model_v4 Cupin domain-containing protein 0.945 103 189
AF-A0A7U9R5R6-F1-model_v4 HTH-type transcriptional regulator SutR 0.9348 97 189
AF-A0A2N6BTF7-F1-model_v4 Cupin type-2 domain-containing protein 0.9193 91 189
AF-A0A7W0A5Z6-F1-model_v4 Cupin domain-containing protein 0.9163 95 195
AF-A0A6G3VUY3-F1-model_v4 deleted 0.9158 110 189

Map