F393998

General Info

Members Datasets Scaffolds Average Seq Length
297 185 594 451

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8025478263|8025478459
Length 461
Sequence SNHHPRPVPAELAATVASLQSRARTELAELVAFRSVADEAQFPRSECEAAAGWVADALRAEGFEDVALLDTPDGTQSVYGYLPGPAGAPTVLLYAHYDVQPPLDEAAWLSPPFELTERDGRWYGRGAADCKGGVVLHLTALRALKEHGGVPVSVKMIVEGSEEQGTGGLERYATAHPELLAADSIVIGDAGNFRVGLPTATATLRGMTLVRVQVDTLGGNLHSGQFGGAAPDALAALIRMLDSLRAEDGSTTVTGLEAEAAASWEGMQYPEEDFRKDAKVLDGVELIGSGTVADRLWARPAVTVLGIDCPPVIGATPSVHAGARALISLRVPPGTDAAAATKLLGEHLKAAAPWGARVAVEQIGQGQAFRADTGSPAYTAMADAMRIAYPGQEMQISGMGGSIPLCNTLTALYPEAEILLIGLSEPEAQIHAVNESVSPEELERLSLAEALFLGNYAESKR

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
24 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
34 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
40 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
42 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
64 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
65 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
66 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
67 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
68 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
69 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
70 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
71 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
72 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
73 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
74 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
75 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
76 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
77 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
78 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
79 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
80 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
81 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
82 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
83 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
84 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
85 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
86 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
87 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
88 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
89 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
90 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
91 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
92 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
93 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
94 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
95 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
96 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
97 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
98 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
99 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
100 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
101 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
102 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
103 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
104 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
105 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
106 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
107 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
108 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
109 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
110 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
111 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
114 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
115 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
116 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
117 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
118 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
121 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
122 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
123 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
126 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
127 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
143 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
149 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
150 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
151 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
152 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
153 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
154 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
155 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
156 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
159 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
160 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
161 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
162 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
163 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
164 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
165 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
166 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
167 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
168 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
169 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
170 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
171 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
173 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
174 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
175 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
176 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
177 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
178 2808606372 Agromyces sp. 23-23 Isolate Unclassified
179 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
180 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
181 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
182 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
183 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
184 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
185 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.62
Metatranscriptomes 0.34
Isolates 4.04

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.04
Nodule 0
Rhizoplane 12.79
Rhizosphere 77.1
Stem 0
Stem Tuber 0
Unclassified 0.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10109920 3300003322 Bacteria 3233
2 Ga0065714_10076419 3300005288 Bacteria 2794
3 Ga0070683_100007790 3300005329 Bacteria 9069
4 Ga0070682_100002964 3300005337 Bacteria 9420
5 Ga0068868_100103147 3300005338 Bacteria 2310
6 Ga0070661_100030031 3300005344 Bacteria 3925
7 Ga0070668_100007196 3300005347 Bacteria 8249
8 Ga0070659_100043969 3300005366 Bacteria 3495
9 Ga0070678_100068557 3300005456 Bacteria 2645
10 Ga0070684_100009758 3300005535 Bacteria 7579
11 Ga0070684_100039015 3300005535 Bacteria 4084
12 Ga0068853_100100824 3300005539 Bacteria 2553
13 Ga0070672_100050295 3300005543 Bacteria 3245
14 Ga0070665_100308731 3300005548 Bacteria 1585
15 Ga0068857_100007505 3300005577 Bacteria 9382
16 Ga0068857_100080421 3300005577 Bacteria 2910
17 Ga0068856_100368684 3300005614 Bacteria 1455
18 Ga0070702_100034036 3300005615 Bacteria 2806
19 Ga0068858_100126970 3300005842 Bacteria 2389
20 Ga0081455_10001196 3300005937 Bacteria 32499
21 Ga0081455_10025319 3300005937 Bacteria 5480
22 Ga0081455_10032579 3300005937 Bacteria 4694
23 Ga0081455_10079745 3300005937 Bacteria 2687
24 Ga0081455_10147194 3300005937 Unclassified 1820
25 Ga0081539_10000179 3300005985 Bacteria 149126
26 Ga0081539_10031821 3300005985 Bacteria 3245
27 Ga0075430_100005979 3300006846 Bacteria 10271
28 Ga0075431_100005466 3300006847 Bacteria 12552
29 Ga0075433_10001181 3300006852 Bacteria 18990
30 Ga0075429_100001898 3300006880 Bacteria 17317
31 Ga0068865_100010528 3300006881 Bacteria 5759
32 Ga0068865_100036777 3300006881 Bacteria 3303
33 Ga0075436_100003680 3300006914 Bacteria 10507
34 Ga0111539_10139017 3300009094 Bacteria 2844
35 Ga0105245_10003498 3300009098 Bacteria 14055
36 Ga0105245_10129799 3300009098 Bacteria 2363
37 Ga0114129_10004038 3300009147 Bacteria 20724
38 Ga0114129_10006206 3300009147 Bacteria 16951
39 Ga0114129_10194506 3300009147 Bacteria 2751
40 Ga0114129_10227728 3300009147 Bacteria 2511
41 Ga0105243_10175905 3300009148 Bacteria 1857
42 Ga0105242_10019661 3300009176 Bacteria 5292
43 Ga0105249_10014389 3300009553 Bacteria 6996
44 Ga0105249_10068034 3300009553 Bacteria 3283
45 Ga0105239_10000854 3300010375 Bacteria 43307
46 Ga0105246_10000321 3300011119 Bacteria 25383
47 Ga0157371_10166263 3300013102 Bacteria 1575
48 Ga0157369_10359157 3300013105 Bacteria 1513
49 Ga0157372_10010217 3300013307 Bacteria 9965
50 Ga0157372_10127904 3300013307 Bacteria 2921
51 Ga0157375_10016368 3300013308 Bacteria 6658
52 Ga0163163_10134286 3300014325 Bacteria 2515
53 Ga0157380_10041210 3300014326 Bacteria 3602
54 Ga0224712_10001734 3300022467 Bacteria 5184
55 Ga0207426_1006660 3300025302 Bacteria 4965
56 Ga0207426_1012282 3300025302 Bacteria 3223
57 Ga0207426_1012723 3300025302 Bacteria 3150
58 Ga0207426_1018717 3300025302 Bacteria 2436
59 Ga0207655_1001455 3300025728 Bacteria 21891
60 Ga0207688_10007740 3300025901 Bacteria 5852
61 Ga0207688_10010141 3300025901 Bacteria 5125
62 Ga0207647_10007637 3300025904 Bacteria 7794
63 Ga0207705_10021619 3300025909 Bacteria 4591
64 Ga0207693_10017145 3300025915 Bacteria 5778
65 Ga0207649_10049350 3300025920 Bacteria 2599
66 Ga0207690_10014172 3300025932 Bacteria 4810
67 Ga0207709_10002136 3300025935 Bacteria 12668
68 Ga0207709_10032733 3300025935 Bacteria 3047
69 Ga0207704_10027547 3300025938 Bacteria 3138
70 Ga0207704_10042433 3300025938 Bacteria 2678
71 Ga0207691_10000351 3300025940 Bacteria 46524
72 Ga0207661_10000896 3300025944 Bacteria 19528
73 Ga0207661_10005367 3300025944 Bacteria 9032
74 Ga0207661_10026435 3300025944 Bacteria 4423
75 Ga0207661_10028073 3300025944 Bacteria 4307
76 Ga0207661_10080545 3300025944 Bacteria 2687
77 Ga0207712_10051755 3300025961 Bacteria 2874
78 Ga0207712_10087086 3300025961 Bacteria 2290
79 Ga0207668_10018914 3300025972 Bacteria 4342
80 Ga0207668_10063961 3300025972 Bacteria 2598
81 Ga0207677_10115905 3300026023 Bacteria 2005
82 Ga0207703_10162480 3300026035 Bacteria 1957
83 Ga0207678_10266984 3300026067 Bacteria 1467
84 Ga0207702_10014846 3300026078 Bacteria 6461
85 Ga0207674_10012449 3300026116 Bacteria 9507
86 Ga0207674_10097327 3300026116 Bacteria 2926
87 Ga0207675_100024634 3300026118 Bacteria 5595
88 Ga0207683_10126828 3300026121 Bacteria 2294
89 Ga0268266_10200102 3300028379 Bacteria 1828
90 Ga0307517_10010536 3300028786 Bacteria 12932
91 Ga0307515_10146181 3300028794 Bacteria 2502
92 Ga0307511_10118594 3300030521 Bacteria 1648
93 Ga0307513_10105468 3300031456 Bacteria 2827
94 Ga0307509_10087666 3300031507 Bacteria 3197
95 Ga0307408_100094290 3300031548 Bacteria 2266
96 Ga0307508_10001535 3300031616 Bacteria 25838
97 Ga0307508_10023545 3300031616 Bacteria 5591
98 Ga0307508_10148686 3300031616 Bacteria 1947
99 Ga0307516_10007034 3300031730 Bacteria 13028
100 Ga0307405_10128496 3300031731 Bacteria 1747
101 Ga0307413_10120337 3300031824 Bacteria 1777
102 Ga0307410_10109281 3300031852 Bacteria 1998
103 Ga0326468_10000518 3300031889 Bacteria 4035
104 Ga0307406_10021698 3300031901 Bacteria 3802
105 Ga0307407_10016030 3300031903 Bacteria 3722
106 Ga0307407_10020531 3300031903 Bacteria 3388
107 Ga0307407_10094698 3300031903 Bacteria 1839
108 Ga0307409_100001012 3300031995 Bacteria 13173
109 Ga0307409_100063824 3300031995 Bacteria 2890
110 Ga0307409_100174851 3300031995 Bacteria 1894
111 Ga0307416_100014566 3300032002 Bacteria 5396
112 Ga0307416_100023855 3300032002 Bacteria 4450
113 Ga0307415_100002738 3300032126 Bacteria 8810
114 Ga0307510_10112934 3300033180 Bacteria 2452
115 Ga0395901_0017667 3300038443 Bacteria 7281
116 Ga0436365_1886636 3300039437 Bacteria 5330
117 Ga0466972_0005191 3300044658 Bacteria 6520
118 Ga0466961_0039905 3300044693 Bacteria 3009
119 Ga0466971_0034445 3300044719 Bacteria 2269
120 Ga0466960_0000913 3300044901 Bacteria 10459
121 Ga0495592_0031952 3300046454 Bacteria 3976
122 Ga0495603_0000444 3300046455 Bacteria 22690
123 Ga0495603_0003795 3300046455 Bacteria 8994
124 Ga0495629_0011097 3300046459 Bacteria 6546
125 Ga0495629_0017072 3300046459 Bacteria 5207
126 Ga0495638_0055406 3300046460 Bacteria 2462
127 Ga0495639_0025138 3300046475 Bacteria 2625
128 Ga0495585_0055368 3300046492 Bacteria 2192
129 Ga0495594_0001917 3300046499 Bacteria 10845
130 Ga0495594_0032531 3300046499 Bacteria 2832
131 Ga0495643_0016011 3300046522 Bacteria 4413
132 Ga0495666_0074174 3300046526 Bacteria 1614
133 Ga0495665_0008122 3300046531 Bacteria 5693
134 Ga0495640_0054573 3300046533 Bacteria 2736
135 Ga0495586_0003353 3300046535 Bacteria 8586
136 Ga0495645_0098835 3300046543 Bacteria 2077
137 Ga0495633_0050044 3300046558 Bacteria 1971
138 Ga0495634_0048120 3300046642 Bacteria 2871
139 Ga0495588_0004354 3300046674 Bacteria 6252
140 Ga0495670_0003148 3300046691 Bacteria 8127
141 Ga0495581_0004642 3300047315 Bacteria 7930
142 Ga0495604_0006769 3300047317 Bacteria 9094
143 Ga0495604_0070721 3300047317 Bacteria 2642
144 Ga0495676_0001692 3300047321 Bacteria 19269
145 Ga0495676_0063921 3300047321 Bacteria 2866
146 Ga0495687_017604 3300047443 Bacteria 3558
147 Ga0495681_0009430 3300047470 Bacteria 6016
148 Ga0495686_0041437 3300047472 Bacteria 2932
149 Ga0495593_0043878 3300047673 Bacteria 2394
150 Ga0496101_0073085 3300048904 Bacteria 2518
151 Ga0496102_0004167 3300048905 Bacteria 12236
152 Ga0496102_0007413 3300048905 Bacteria 9366
153 Ga0496102_0053935 3300048905 Bacteria 3665
154 Ga0496103_0031116 3300048906 Bacteria 3250
155 Ga0496103_0079582 3300048906 Bacteria 2059
156 Ga0496104_0025128 3300048907 Bacteria 5489
157 Ga0496104_0133432 3300048907 Bacteria 2385
158 Ga0496105_0053933 3300048908 Bacteria 3320
159 Ga0496106_0148730 3300048909 Bacteria 1846
160 Ga0496107_0010979 3300048910 Bacteria 6302
161 Ga0496108_0043315 3300048911 Bacteria 3760
162 Ga0496108_0158434 3300048911 Bacteria 1955
163 Ga0496108_0195626 3300048911 Bacteria 1753
164 Ga0496109_0050029 3300048912 Bacteria 3806
165 Ga0496109_0062561 3300048912 Bacteria 3404
166 Ga0496109_0090788 3300048912 Bacteria 2825
167 Ga0496109_0103957 3300048912 Bacteria 2637
168 Ga0496109_0112214 3300048912 Bacteria 2535
169 Ga0496109_0295834 3300048912 Bacteria 1526
170 Ga0496110_0009529 3300048913 Bacteria 7860
171 Ga0496110_0009630 3300048913 Bacteria 7821
172 Ga0496110_0095757 3300048913 Bacteria 2659
173 Ga0496110_0132360 3300048913 Bacteria 2252
174 Ga0496111_0009412 3300048914 Bacteria 6518
175 Ga0496111_0015454 3300048914 Bacteria 5241
176 Ga0496111_0027808 3300048914 Bacteria 4004
177 Ga0496111_0042956 3300048914 Bacteria 3247
178 Ga0496111_0066707 3300048914 Bacteria 2614
179 Ga0496112_0057265 3300048915 Bacteria 3837
180 Ga0496112_0071532 3300048915 Bacteria 3428
181 Ga0496112_0203683 3300048915 Bacteria 1937
182 Ga0496113_0052029 3300048916 Bacteria 3057
183 Ga0496113_0072613 3300048916 Bacteria 2619
184 Ga0496113_0075102 3300048916 Bacteria 2579
185 Ga0496114_0008122 3300048917 Bacteria 8316
186 Ga0496114_0101585 3300048917 Bacteria 2455
187 Ga0496115_0051577 3300048918 Bacteria 3298
188 Ga0496125_0003838 3300048928 Bacteria 17829
189 Ga0501031_0022739 3300049568 Bacteria 4087
190 Ga0501031_0029169 3300049568 Bacteria 3599
191 Ga0501032_0003157 3300049569 Bacteria 12676
192 Ga0501032_0008833 3300049569 Bacteria 7327
193 Ga0501033_0038883 3300049570 Bacteria 3554
194 Ga0501033_0127175 3300049570 Bacteria 1847
195 Ga0501034_0011486 3300049571 Bacteria 9179
196 Ga0501034_0029473 3300049571 Bacteria 5578
197 Ga0501036_0002897 3300049572 Bacteria 13617
198 Ga0501036_0012594 3300049572 Bacteria 7013
199 Ga0501036_0042999 3300049572 Bacteria 3825
200 Ga0501036_0075320 3300049572 Bacteria 2854
201 Ga0501037_0003513 3300049573 Bacteria 11376
202 Ga0501037_0052045 3300049573 Bacteria 2995
203 Ga0501037_0093170 3300049573 Bacteria 2178
204 Ga0501038_0012363 3300049574 Bacteria 7801
205 Ga0501038_0013670 3300049574 Bacteria 7398
206 Ga0501038_0039543 3300049574 Bacteria 4125
207 Ga0501038_0057440 3300049574 Bacteria 3341
208 Ga0501039_0001260 3300049575 Bacteria 18504
209 Ga0501039_0029628 3300049575 Bacteria 4215
210 Ga0501040_0009270 3300049576 Bacteria 6410
211 Ga0501040_0044624 3300049576 Bacteria 3022
212 Ga0501041_0002178 3300049577 Bacteria 11059
213 Ga0501041_0053891 3300049577 Bacteria 2453
214 Ga0501042_0009070 3300049578 Bacteria 6614
215 Ga0501042_0011833 3300049578 Bacteria 5894
216 Ga0501043_0000682 3300049579 Bacteria 29934
217 Ga0501043_0006156 3300049579 Bacteria 9638
218 Ga0501043_0054660 3300049579 Bacteria 3136
219 Ga0501046_0065544 3300049580 Bacteria 2833
220 Ga0501046_0105060 3300049580 Bacteria 2163
221 Ga0501047_0000103 3300049581 Bacteria 104053
222 Ga0501047_0000947 3300049581 Bacteria 29395
223 Ga0501047_0001575 3300049581 Bacteria 22284
224 Ga0501047_0014490 3300049581 Bacteria 7498
225 Ga0501048_0024602 3300049582 Bacteria 4394
226 Ga0501048_0042116 3300049582 Bacteria 3270
227 Ga0501067_0013255 3300049583 Bacteria 4564
228 Ga0501068_0001844 3300049584 Bacteria 11242
229 Ga0501070_0013806 3300049586 Bacteria 6804
230 Ga0501070_0018961 3300049586 Bacteria 5769
231 Ga0501070_0056861 3300049586 Bacteria 3243
232 Ga0501071_0000360 3300049587 Bacteria 22335
233 Ga0501071_0136918 3300049587 Bacteria 1822
234 Ga0501072_0001023 3300049588 Bacteria 20717
235 Ga0501072_0005423 3300049588 Bacteria 9707
236 Ga0501073_0046713 3300049589 Bacteria 3043
237 Ga0501073_0108716 3300049589 Bacteria 1924
238 Ga0501074_0002358 3300049590 Bacteria 13147
239 Ga0501074_0058527 3300049590 Bacteria 2776
240 Ga0501074_0118214 3300049590 Bacteria 1896
241 Ga0501075_0012197 3300049591 Bacteria 6100
242 Ga0501075_0032223 3300049591 Bacteria 3893
243 Ga0501075_0063129 3300049591 Bacteria 2793
244 Ga0501076_0005988 3300049592 Bacteria 8781
245 Ga0501076_0033609 3300049592 Bacteria 4005
246 Ga0501077_0014257 3300049593 Bacteria 4993
247 Ga0501077_0046828 3300049593 Bacteria 2747
248 Ga0501079_0071336 3300049741 Bacteria 2683
249 Ga0501080_0066279 3300049742 Bacteria 3358
250 Ga0501081_0044952 3300049743 Bacteria 3032
251 Ga0501083_0022837 3300049744 Bacteria 4340
252 Ga0501035_0014640 3300049822 Bacteria 7242
253 Ga0501035_0019662 3300049822 Bacteria 6207
254 Ga0501035_0031941 3300049822 Bacteria 4795
255 Ga0501035_0145158 3300049822 Bacteria 2061
256 Ga0501035_0216706 3300049822 Bacteria 1636
257 Ga0501044_0001028 3300049823 Bacteria 33648
258 Ga0501044_0010386 3300049823 Bacteria 10101
259 Ga0501044_0013646 3300049823 Bacteria 8781
260 Ga0501044_0050439 3300049823 Bacteria 4294
261 Ga0501045_0000909 3300049824 Bacteria 19287
262 Ga0501045_0011990 3300049824 Bacteria 6093
263 Ga0501045_0043463 3300049824 Bacteria 3272
264 Ga0501045_0054669 3300049824 Bacteria 2919
265 nmdc:mga0yw44_7228_c1 3300050492 Bacteria 5441
266 nmdc:mga05p37_14001_c1 3300050507 Bacteria 9619
267 nmdc:mga05p37_25597_c1 3300050507 Bacteria 7178
268 nmdc:mga09592_9927_c1 3300050508 Bacteria 7745
269 nmdc:mga0qj67_35068_c1 3300050509 Bacteria 3922
270 nmdc:mga06r32_22394_c1 3300050510 Bacteria 5842
271 nmdc:mga0n895_80456_c1 3300050512 Bacteria 3246
272 Ga0500578_0025612 3300053086 Bacteria 3783
273 Ga0500628_001456 3300053129 Bacteria 4049
274 Ga0500652_003774 3300053131 Bacteria 4618
275 Ga0500652_008349 3300053131 Bacteria 3447
276 Ga0500658_0018581 3300053134 Bacteria 2608
277 Ga0500600_0021442 3300053149 Bacteria 3872
278 Ga0500656_000500 3300053732 Bacteria 2900
279 Ga0501084_0001938 3300054114 Bacteria 16527
280 Ga0501084_0010182 3300054114 Bacteria 7774
281 Ga0501084_0074570 3300054114 Bacteria 2841
282 Ga0501082_0027876 3300060353 Bacteria 4864
283 Ga0530510_0015243 3300061734 Bacteria 5428
284 Ga0530510_0020631 3300061734 Bacteria 4685
285 Ga0530510_0024741 3300061734 Bacteria 4289
286 8025478459 8025478263 Bacteria 8209203
287 2616901553 2616644941 Bacteria 8510691
288 2643947393 2643221587 Bacteria 7586415
289 2808874680 2808606365 Bacteria 4301966
290 2808899452 2808606372 Bacteria 4649509
291 2895432587 2895427314 Bacteria 13147766
292 2918502141 2918501144 Bacteria 8668083
293 2939661278 2939660829 Bacteria 3784848
294 3006327740 3006321560 Bacteria 8247479
295 8048133836 8048127548 Bacteria 11053136
296 8056450524 8056447290 Bacteria 7680491
297 8056670008 8056667051 Bacteria 6953971
298 rootL2_10109920
299 Ga0065714_10076419
300 Ga0070683_100007790
301 Ga0070682_100002964
302 Ga0068868_100103147
303 Ga0070661_100030031
304 Ga0070668_100007196
305 Ga0070659_100043969
306 Ga0070678_100068557
307 Ga0070684_100009758
308 Ga0070684_100039015
309 Ga0068853_100100824
310 Ga0070672_100050295
311 Ga0070665_100308731
312 Ga0068857_100007505
313 Ga0068857_100080421
314 Ga0068856_100368684
315 Ga0070702_100034036
316 Ga0068858_100126970
317 Ga0081455_10001196
318 Ga0081455_10025319
319 Ga0081455_10032579
320 Ga0081455_10079745
321 Ga0081455_10147194
322 Ga0081539_10000179
323 Ga0081539_10031821
324 Ga0075430_100005979
325 Ga0075431_100005466
326 Ga0075433_10001181
327 Ga0075429_100001898
328 Ga0068865_100010528
329 Ga0068865_100036777
330 Ga0075436_100003680
331 Ga0111539_10139017
332 Ga0105245_10003498
333 Ga0105245_10129799
334 Ga0114129_10004038
335 Ga0114129_10006206
336 Ga0114129_10194506
337 Ga0114129_10227728
338 Ga0105243_10175905
339 Ga0105242_10019661
340 Ga0105249_10014389
341 Ga0105249_10068034
342 Ga0105239_10000854
343 Ga0105246_10000321
344 Ga0157371_10166263
345 Ga0157369_10359157
346 Ga0157372_10010217
347 Ga0157372_10127904
348 Ga0157375_10016368
349 Ga0163163_10134286
350 Ga0157380_10041210
351 Ga0224712_10001734
352 Ga0207426_1006660
353 Ga0207426_1012282
354 Ga0207426_1012723
355 Ga0207426_1018717
356 Ga0207655_1001455
357 Ga0207688_10007740
358 Ga0207688_10010141
359 Ga0207647_10007637
360 Ga0207705_10021619
361 Ga0207693_10017145
362 Ga0207649_10049350
363 Ga0207690_10014172
364 Ga0207709_10002136
365 Ga0207709_10032733
366 Ga0207704_10027547
367 Ga0207704_10042433
368 Ga0207691_10000351
369 Ga0207661_10000896
370 Ga0207661_10005367
371 Ga0207661_10026435
372 Ga0207661_10028073
373 Ga0207661_10080545
374 Ga0207712_10051755
375 Ga0207712_10087086
376 Ga0207668_10018914
377 Ga0207668_10063961
378 Ga0207677_10115905
379 Ga0207703_10162480
380 Ga0207678_10266984
381 Ga0207702_10014846
382 Ga0207674_10012449
383 Ga0207674_10097327
384 Ga0207675_100024634
385 Ga0207683_10126828
386 Ga0268266_10200102
387 Ga0307517_10010536
388 Ga0307515_10146181
389 Ga0307511_10118594
390 Ga0307513_10105468
391 Ga0307509_10087666
392 Ga0307408_100094290
393 Ga0307508_10001535
394 Ga0307508_10023545
395 Ga0307508_10148686
396 Ga0307516_10007034
397 Ga0307405_10128496
398 Ga0307413_10120337
399 Ga0307410_10109281
400 Ga0326468_10000518
401 Ga0307406_10021698
402 Ga0307407_10016030
403 Ga0307407_10020531
404 Ga0307407_10094698
405 Ga0307409_100001012
406 Ga0307409_100063824
407 Ga0307409_100174851
408 Ga0307416_100014566
409 Ga0307416_100023855
410 Ga0307415_100002738
411 Ga0307510_10112934
412 Ga0395901_0017667
413 Ga0436365_1886636
414 Ga0466972_0005191
415 Ga0466961_0039905
416 Ga0466971_0034445
417 Ga0466960_0000913
418 Ga0495592_0031952
419 Ga0495603_0000444
420 Ga0495603_0003795
421 Ga0495629_0011097
422 Ga0495629_0017072
423 Ga0495638_0055406
424 Ga0495639_0025138
425 Ga0495585_0055368
426 Ga0495594_0001917
427 Ga0495594_0032531
428 Ga0495643_0016011
429 Ga0495666_0074174
430 Ga0495665_0008122
431 Ga0495640_0054573
432 Ga0495586_0003353
433 Ga0495645_0098835
434 Ga0495633_0050044
435 Ga0495634_0048120
436 Ga0495588_0004354
437 Ga0495670_0003148
438 Ga0495581_0004642
439 Ga0495604_0006769
440 Ga0495604_0070721
441 Ga0495676_0001692
442 Ga0495676_0063921
443 Ga0495687_017604
444 Ga0495681_0009430
445 Ga0495686_0041437
446 Ga0495593_0043878
447 Ga0496101_0073085
448 Ga0496102_0004167
449 Ga0496102_0007413
450 Ga0496102_0053935
451 Ga0496103_0031116
452 Ga0496103_0079582
453 Ga0496104_0025128
454 Ga0496104_0133432
455 Ga0496105_0053933
456 Ga0496106_0148730
457 Ga0496107_0010979
458 Ga0496108_0043315
459 Ga0496108_0158434
460 Ga0496108_0195626
461 Ga0496109_0050029
462 Ga0496109_0062561
463 Ga0496109_0090788
464 Ga0496109_0103957
465 Ga0496109_0112214
466 Ga0496109_0295834
467 Ga0496110_0009529
468 Ga0496110_0009630
469 Ga0496110_0095757
470 Ga0496110_0132360
471 Ga0496111_0009412
472 Ga0496111_0015454
473 Ga0496111_0027808
474 Ga0496111_0042956
475 Ga0496111_0066707
476 Ga0496112_0057265
477 Ga0496112_0071532
478 Ga0496112_0203683
479 Ga0496113_0052029
480 Ga0496113_0072613
481 Ga0496113_0075102
482 Ga0496114_0008122
483 Ga0496114_0101585
484 Ga0496115_0051577
485 Ga0496125_0003838
486 Ga0501031_0022739
487 Ga0501031_0029169
488 Ga0501032_0003157
489 Ga0501032_0008833
490 Ga0501033_0038883
491 Ga0501033_0127175
492 Ga0501034_0011486
493 Ga0501034_0029473
494 Ga0501036_0002897
495 Ga0501036_0012594
496 Ga0501036_0042999
497 Ga0501036_0075320
498 Ga0501037_0003513
499 Ga0501037_0052045
500 Ga0501037_0093170
501 Ga0501038_0012363
502 Ga0501038_0013670
503 Ga0501038_0039543
504 Ga0501038_0057440
505 Ga0501039_0001260
506 Ga0501039_0029628
507 Ga0501040_0009270
508 Ga0501040_0044624
509 Ga0501041_0002178
510 Ga0501041_0053891
511 Ga0501042_0009070
512 Ga0501042_0011833
513 Ga0501043_0000682
514 Ga0501043_0006156
515 Ga0501043_0054660
516 Ga0501046_0065544
517 Ga0501046_0105060
518 Ga0501047_0000103
519 Ga0501047_0000947
520 Ga0501047_0001575
521 Ga0501047_0014490
522 Ga0501048_0024602
523 Ga0501048_0042116
524 Ga0501067_0013255
525 Ga0501068_0001844
526 Ga0501070_0013806
527 Ga0501070_0018961
528 Ga0501070_0056861
529 Ga0501071_0000360
530 Ga0501071_0136918
531 Ga0501072_0001023
532 Ga0501072_0005423
533 Ga0501073_0046713
534 Ga0501073_0108716
535 Ga0501074_0002358
536 Ga0501074_0058527
537 Ga0501074_0118214
538 Ga0501075_0012197
539 Ga0501075_0032223
540 Ga0501075_0063129
541 Ga0501076_0005988
542 Ga0501076_0033609
543 Ga0501077_0014257
544 Ga0501077_0046828
545 Ga0501079_0071336
546 Ga0501080_0066279
547 Ga0501081_0044952
548 Ga0501083_0022837
549 Ga0501035_0014640
550 Ga0501035_0019662
551 Ga0501035_0031941
552 Ga0501035_0145158
553 Ga0501035_0216706
554 Ga0501044_0001028
555 Ga0501044_0010386
556 Ga0501044_0013646
557 Ga0501044_0050439
558 Ga0501045_0000909
559 Ga0501045_0011990
560 Ga0501045_0043463
561 Ga0501045_0054669
562 nmdc:mga0yw44_7228_c1
563 nmdc:mga05p37_14001_c1
564 nmdc:mga05p37_25597_c1
565 nmdc:mga09592_9927_c1
566 nmdc:mga0qj67_35068_c1
567 nmdc:mga06r32_22394_c1
568 nmdc:mga0n895_80456_c1
569 Ga0500578_0025612
570 Ga0500628_001456
571 Ga0500652_003774
572 Ga0500652_008349
573 Ga0500658_0018581
574 Ga0500600_0021442
575 Ga0500656_000500
576 Ga0501084_0001938
577 Ga0501084_0010182
578 Ga0501084_0074570
579 Ga0501082_0027876
580 Ga0530510_0015243
581 Ga0530510_0020631
582 Ga0530510_0024741
583 8025478459
584 2616901553
585 2643947393
586 2808874680
587 2808899452
588 2895432587
589 2918502141
590 2939661278
591 3006327740
592 8048133836
593 8056450524
594 8056670008

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07687

M20_dimer

Peptidase dimerisation domain

203

356

0.96

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

92

454

0.89

PF04389

Peptidase_M28

Peptidase family M28

77

216

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3pfe-assembly1.cif.gz_A-2 crystal structure of a m20a metallo peptidase (dape, lpg0809) from legionella pneumophila subsp. pneumophila str. philadelphia 1 at 1.50 a resolution 0.8428 3 446
5vo3-assembly1.cif.gz_A-2 crystal structure of dape in complex with the products (succinic acid and diaminopimelic acid) 0.8384 7 446
3pfe-assembly1.cif.gz_A-2 crystal structure of a m20a metallo peptidase (dape, lpg0809) from legionella pneumophila subsp. pneumophila str. philadelphia 1 at 1.50 a resolution 0.8376 3 446
1q7l-assembly1.cif.gz_A zn-binding domain of the t347g mutant of human aminoacylase-i 0.8367 13 184
4op4-assembly2.cif.gz_B crystal structure of the catalytic domain of dape protein from v.cholerea in the zn bound form 0.8343 14 440
ID Description Score Start End Superfamily
4mmoA01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9004 13 446 3.40.630.10
4mmoA01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.891 13 446 3.40.630.10
af_Q4DBK5_22_457_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8674 17 434 3.40.630.10
1cg2D01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8551 3 194 3.40.630.10
af_Q54X02_3_472_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8531 4 446 3.40.630.10
ID Description Score Start End GO Terms
AF-A0A0Q7N2E7-F1-model_v4 Beta-Ala-His dipeptidase 0.9795 3 443 GO:0016787
AF-A0A4U1IV30-F1-model_v4 Dipeptidase 0.9755 3 445 GO:0016787
AF-A0A1M7GS83-F1-model_v4 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase 0.9739 1 445 GO:0016787
AF-F2R9P6-F1-model_v4 N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14) 0.9717 3 445 GO:0004046
AF-A0A3B0TBK1-F1-model_v4 Peptidase M20 dimerisation domain-containing protein 0.9714 110 445 GO:0016787

Map