F393936

General Info

Members Datasets Scaffolds Average Seq Length
297 201 594 198

Family's Representative Sequence

Representative Sequence 3300049775|Ga0501279_004193|Ga0501279_004193_245_928
Length 227
Sequence MVCTEIVRPGGSRVNTLSEQARSSKTRRYEMGKRTEKISGTHQRIIDAAVTLHGSIGPARTTIAGVAEKAGVTRLTVYRHFPDDNALFSACSSHWLSQQQLPDPGEWSRHKDPFERLTVGLTDLYRFYRDGESMLTRIYGDWNALPEAHRSGLESRNAHFRDILAEPFPEPNRNLRLDATLSHAISFWTWRSLCHDNRLSNDDAVDVMSILITTAATGGGQRLPAGA

Samples

Sample ID Description Type Environment
1 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
35 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
67 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
68 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
70 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
109 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
110 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
111 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
112 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
115 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
116 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
117 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
118 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
119 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
120 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
121 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
122 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
123 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
124 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
125 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
126 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
127 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
128 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
129 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
130 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
131 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
132 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
133 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
134 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
135 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
136 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
137 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
138 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
139 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
140 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
141 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
142 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
143 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
144 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
145 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
146 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
147 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
148 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
149 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
150 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
151 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
152 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
153 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
154 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
155 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
156 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
157 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
158 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
159 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
160 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
161 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
162 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
163 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
164 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
165 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
166 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
167 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
168 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
169 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
170 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
171 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
172 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
173 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
174 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
175 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
176 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
177 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
178 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
179 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
180 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
181 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
182 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
183 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
184 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
185 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
186 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
187 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
188 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
189 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
190 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
191 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
192 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
193 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
194 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
195 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
196 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
197 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
198 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
199 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
200 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
201 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.61
Metatranscriptomes 1.01
Isolates 4.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.34
Nodule 0
Rhizoplane 12.12
Rhizosphere 82.83
Stem 0
Stem Tuber 0
Unclassified 7.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501279_004193 3300049775 Bacteria 1892
2 rootH2_10161843 3300003320 Bacteria 3121
3 Ga0070658_10607190 3300005327 Bacteria 948
4 Ga0070683_100052491 3300005329 Bacteria 3777
5 Ga0068868_100256291 3300005338 Unclassified 1474
6 Ga0068868_100476909 3300005338 Bacteria 1089
7 Ga0070660_100879139 3300005339 Unclassified 755
8 Ga0070689_100272548 3300005340 Bacteria 1401
9 Ga0070689_100588727 3300005340 Bacteria 962
10 Ga0070691_10059929 3300005341 Bacteria 1829
11 Ga0070659_100081746 3300005366 Bacteria 2580
12 Ga0070709_10064848 3300005434 Bacteria 2336
13 Ga0070709_10101038 3300005434 Bacteria 1921
14 Ga0070714_100033298 3300005435 Bacteria 4307
15 Ga0070714_100039027 3300005435 Bacteria 3996
16 Ga0070714_100102424 3300005435 Bacteria 2524
17 Ga0070714_100432749 3300005435 Bacteria 1248
18 Ga0070713_100021690 3300005436 Bacteria 4947
19 Ga0070713_100051193 3300005436 Bacteria 3415
20 Ga0070713_100246471 3300005436 Bacteria 1628
21 Ga0070713_100676296 3300005436 Bacteria 984
22 Ga0070710_10039421 3300005437 Bacteria 2599
23 Ga0070710_10072656 3300005437 Bacteria 1987
24 Ga0070710_10138822 3300005437 Bacteria 1488
25 Ga0070711_100073327 3300005439 Bacteria 2418
26 Ga0070711_100102913 3300005439 Bacteria 2080
27 Ga0070700_100105716 3300005441 Bacteria 1862
28 Ga0070694_100135117 3300005444 Bacteria 1786
29 Ga0070678_100185317 3300005456 Bacteria 1707
30 Ga0070681_10092873 3300005458 Bacteria 2966
31 Ga0070681_10316469 3300005458 Unclassified 1470
32 Ga0068867_100520697 3300005459 Unclassified 1025
33 Ga0070706_100023077 3300005467 Bacteria 5730
34 Ga0070706_100531160 3300005467 Bacteria 1094
35 Ga0070707_100292042 3300005468 Bacteria 1584
36 Ga0070707_100494307 3300005468 Bacteria 1185
37 Ga0070679_100129335 3300005530 Bacteria 2507
38 Ga0070679_100543552 3300005530 Bacteria 1105
39 Ga0068853_100722842 3300005539 Bacteria 951
40 Ga0070695_100855621 3300005545 Unclassified 732
41 Ga0070665_100434010 3300005548 Bacteria 1323
42 Ga0070665_100575122 3300005548 Bacteria 1139
43 Ga0070664_100306357 3300005564 Bacteria 1436
44 Ga0068856_100195557 3300005614 Bacteria 2036
45 Ga0068852_100235353 3300005616 Unclassified 1748
46 Ga0068859_100117998 3300005617 Bacteria 2719
47 Ga0068859_100367445 3300005617 Unclassified 1534
48 Ga0068858_100416962 3300005842 Bacteria 1291
49 Ga0068858_100588869 3300005842 Bacteria 1078
50 Ga0081455_10056708 3300005937 Bacteria 3325
51 Ga0081455_10229742 3300005937 Bacteria 1370
52 Ga0081538_10050536 3300005981 Bacteria 2509
53 Ga0070717_10054413 3300006028 Bacteria 3300
54 Ga0070717_10300302 3300006028 Bacteria 1427
55 Ga0070717_10851892 3300006028 Bacteria 829
56 Ga0075363_100146767 3300006048 Bacteria 1330
57 Ga0070715_10113442 3300006163 Bacteria 1282
58 Ga0070716_100217817 3300006173 Bacteria 1280
59 Ga0070716_100308168 3300006173 Bacteria 1104
60 Ga0070716_100735151 3300006173 Bacteria 757
61 Ga0070712_100015743 3300006175 Bacteria 4876
62 Ga0070712_100380863 3300006175 Bacteria 1161
63 Ga0075428_100000704 3300006844 Bacteria 34559
64 Ga0075428_100020103 3300006844 Bacteria 7394
65 Ga0075428_100116892 3300006844 Bacteria 2905
66 Ga0075428_100292455 3300006844 Bacteria 1752
67 Ga0075430_100048475 3300006846 Bacteria 3587
68 Ga0075431_100060250 3300006847 Bacteria 3916
69 Ga0075429_100030723 3300006880 Bacteria 4666
70 Ga0068865_100109252 3300006881 Unclassified 2037
71 Ga0075436_100681944 3300006914 Bacteria 760
72 Ga0097620_100117989 3300006931 Bacteria 2719
73 Ga0097620_100367460 3300006931 Unclassified 1534
74 Ga0105240_10394494 3300009093 Bacteria 1560
75 Ga0111539_10226484 3300009094 Bacteria 2178
76 Ga0105245_10341242 3300009098 Bacteria 1481
77 Ga0114129_10014539 3300009147 Bacteria 11216
78 Ga0114129_10037805 3300009147 Bacteria 6813
79 Ga0114129_10240745 3300009147 Bacteria 2432
80 Ga0105241_10551514 3300009174 Bacteria 1035
81 Ga0105248_10051966 3300009177 Bacteria 4599
82 Ga0105248_10363415 3300009177 Bacteria 1630
83 Ga0105237_10359725 3300009545 Bacteria 1460
84 Ga0105238_10743271 3300009551 Bacteria 994
85 Ga0105249_10045095 3300009553 Bacteria 4009
86 Ga0105239_11163979 3300010375 Bacteria 888
87 Ga0105246_10006342 3300011119 Bacteria 7221
88 Ga0105246_10163914 3300011119 Bacteria 1696
89 Ga0157373_10447664 3300013100 Unclassified 929
90 Ga0157370_10280346 3300013104 Bacteria 1540
91 Ga0157370_10429430 3300013104 Bacteria 1215
92 Ga0157369_10009204 3300013105 Bacteria 11301
93 Ga0157369_10009652 3300013105 Bacteria 11038
94 Ga0157369_10122121 3300013105 Bacteria 2763
95 Ga0157369_11123767 3300013105 Bacteria 803
96 Ga0163162_10254469 3300013306 Bacteria 1888
97 Ga0163162_10400969 3300013306 Bacteria 1504
98 Ga0163162_10947484 3300013306 Bacteria 972
99 Ga0157372_10482955 3300013307 Bacteria 1444
100 Ga0157372_10921142 3300013307 Unclassified 1013
101 Ga0157375_10069702 3300013308 Bacteria 3524
102 Ga0163163_10057962 3300014325 Bacteria 3829
103 Ga0163163_10225528 3300014325 Bacteria 1923
104 Ga0163163_10245072 3300014325 Bacteria 1842
105 Ga0163163_11022422 3300014325 Bacteria 890
106 Ga0157377_10119097 3300014745 Bacteria 1597
107 Ga0157379_10825956 3300014968 Bacteria 876
108 Ga0157376_11330106 3300014969 Bacteria 749
109 Ga0183367_1004 3300015688 Bacteria 716880
110 Ga0197907_10172108 3300020069 Bacteria 1293
111 Ga0206351_10621464 3300020077 Bacteria 797
112 Ga0213875_10068238 3300021388 Bacteria 1661
113 Ga0224712_10262048 3300022467 Bacteria 801
114 Ga0207692_10013988 3300025898 Bacteria 3496
115 Ga0207692_10049754 3300025898 Bacteria 2116
116 Ga0207710_10290856 3300025900 Bacteria 824
117 Ga0207688_10021498 3300025901 Bacteria 3526
118 Ga0207699_10098717 3300025906 Bacteria 1848
119 Ga0207705_10492692 3300025909 Bacteria 952
120 Ga0207684_10226203 3300025910 Bacteria 1614
121 Ga0207707_10083232 3300025912 Bacteria 2794
122 Ga0207707_10201156 3300025912 Unclassified 1737
123 Ga0207671_10824264 3300025914 Bacteria 735
124 Ga0207693_10050687 3300025915 Bacteria 3259
125 Ga0207693_10142588 3300025915 Bacteria 1884
126 Ga0207663_10027769 3300025916 Bacteria 3304
127 Ga0207663_10320171 3300025916 Bacteria 1165
128 Ga0207660_11537758 3300025917 Unclassified 537
129 Ga0207657_10653467 3300025919 Unclassified 818
130 Ga0207687_10170392 3300025927 Bacteria 1679
131 Ga0207687_10425385 3300025927 Bacteria 1097
132 Ga0207700_10013005 3300025928 Bacteria 5394
133 Ga0207700_10061140 3300025928 Bacteria 2856
134 Ga0207700_10204112 3300025928 Bacteria 1667
135 Ga0207664_10022138 3300025929 Bacteria 4741
136 Ga0207664_10269531 3300025929 Bacteria 1491
137 Ga0207664_10310351 3300025929 Bacteria 1389
138 Ga0207664_10462478 3300025929 Bacteria 1133
139 Ga0207644_10732454 3300025931 Bacteria 825
140 Ga0207690_10101612 3300025932 Bacteria 2054
141 Ga0207709_10212258 3300025935 Bacteria 1390
142 Ga0207670_10293756 3300025936 Bacteria 1270
143 Ga0207665_10306446 3300025939 Bacteria 1189
144 Ga0207665_10344102 3300025939 Bacteria 1124
145 Ga0207689_10042349 3300025942 Bacteria 3767
146 Ga0207661_10109092 3300025944 Bacteria 2338
147 Ga0207679_10423851 3300025945 Bacteria 1175
148 Ga0207667_10927444 3300025949 Bacteria 861
149 Ga0207640_10417470 3300025981 Bacteria 1097
150 Ga0207677_10484632 3300026023 Bacteria 1066
151 Ga0207703_10667282 3300026035 Bacteria 987
152 Ga0207678_10338633 3300026067 Bacteria 1296
153 Ga0207708_10266195 3300026075 Bacteria 1385
154 Ga0207708_10523475 3300026075 Bacteria 997
155 Ga0207702_10326230 3300026078 Bacteria 1463
156 Ga0207641_10028146 3300026088 Bacteria 4642
157 Ga0207641_10047634 3300026088 Bacteria 3615
158 Ga0207676_10361916 3300026095 Bacteria 1345
159 Ga0207676_10427689 3300026095 Bacteria 1243
160 Ga0207675_100008264 3300026118 Bacteria 9804
161 Ga0207675_100658083 3300026118 Unclassified 1054
162 Ga0207683_10187680 3300026121 Bacteria 1876
163 Ga0207698_11055930 3300026142 Bacteria 824
164 Ga0268266_10147940 3300028379 Bacteria 2114
165 Ga0268265_10282619 3300028380 Bacteria 1486
166 Ga0307413_10307018 3300031824 Bacteria 1206
167 Ga0307406_10244640 3300031901 Bacteria 1348
168 Ga0307407_10187929 3300031903 Bacteria 1374
169 Ga0307412_10031401 3300031911 Bacteria 3354
170 Ga0307412_10639566 3300031911 Bacteria 906
171 Ga0307409_100298926 3300031995 Bacteria 1496
172 Ga0307409_100513386 3300031995 Bacteria 1169
173 Ga0307409_100660836 3300031995 Bacteria 1040
174 Ga0307416_100039785 3300032002 Bacteria 3644
175 Ga0307416_100114751 3300032002 Bacteria 2384
176 Ga0307414_10899035 3300032004 Bacteria 812
177 Ga0307415_100269383 3300032126 Bacteria 1394
178 Ga0373934_0193668 3300035086 Bacteria 836
179 Ga0373949_0141835 3300035090 Bacteria 689
180 Ga0373936_0001540 3300035113 Bacteria 8398
181 Ga0373943_0390021 3300035170 Bacteria 803
182 Ga0373955_0044876 3300035172 Bacteria 2383
183 Ga0373931_0190577 3300035691 Bacteria 1220
184 Ga0373935_0154909 3300035692 Bacteria 1558
185 Ga0373933_0015165 3300035724 Bacteria 4295
186 Ga0373937_0036343 3300036401 Bacteria 4488
187 Ga0373937_0239786 3300036401 Bacteria 1708
188 Ga0373925_0899329 3300037068 Bacteria 730
189 Ga0395898_0020685 3300037466 Bacteria 6680
190 Ga0436364_0310151 3300037853 Bacteria 1109
191 Ga0436364_1472287 3300037853 Bacteria 4582
192 Ga0436365_1383180 3300039437 Bacteria 2867
193 Ga0436363_0968779 3300039450 Bacteria 856
194 Ga0436362_1288258 3300039453 Bacteria 1052
195 Ga0439442_000547 3300042002 Bacteria 8311
196 Ga0439451_018461 3300042009 Bacteria 1408
197 Ga0439454_009633 3300042011 Bacteria 1258
198 Ga0439455_0044238 3300042012 Bacteria 1148
199 Ga0439456_004912 3300042013 Bacteria 2711
200 Ga0450903_004166 3300042138 Bacteria 2475
201 Ga0439458_0002032 3300042157 Bacteria 5029
202 Ga0439464_0018981 3300042439 Bacteria 1874
203 Ga0439460_0003803 3300042461 Bacteria 3652
204 Ga0439440_0050246 3300042993 Bacteria 1040
205 Ga0466969_0008183 3300044656 Bacteria 5549
206 Ga0466961_0061771 3300044693 Bacteria 2381
207 Ga0466971_0005828 3300044719 Bacteria 5363
208 Ga0495592_0291079 3300046454 Unclassified 1065
209 Ga0495651_0062939 3300046462 Bacteria 2837
210 Ga0495651_0362398 3300046462 Bacteria 955
211 Ga0495653_0010115 3300046463 Bacteria 7719
212 Ga0495642_0176980 3300046528 Bacteria 928
213 Ga0495640_0107328 3300046533 Bacteria 1827
214 Ga0495640_0165973 3300046533 Bacteria 1413
215 Ga0495645_0078084 3300046543 Unclassified 2380
216 Ga0495645_0548280 3300046543 Bacteria 717
217 Ga0495667_0024066 3300046559 Bacteria 4101
218 Ga0495667_0260634 3300046559 Bacteria 1103
219 Ga0495656_0001729 3300046615 Bacteria 7147
220 Ga0495668_0337416 3300046616 Bacteria 827
221 Ga0495634_0131932 3300046642 Bacteria 1592
222 Ga0495635_0010873 3300046663 Bacteria 6378
223 Ga0495635_0230313 3300046663 Bacteria 1252
224 Ga0495646_0217086 3300046680 Unclassified 1036
225 Ga0495670_0013743 3300046691 Bacteria 3980
226 Ga0495636_0032978 3300047318 Bacteria 2126
227 Ga0495680_0003994 3300047322 Bacteria 14252
228 Ga0495680_0545787 3300047322 Bacteria 782
229 Ga0495684_0170003 3300047471 Bacteria 1622
230 Ga0495684_0194644 3300047471 Bacteria 1497
231 Ga0496100_0036070 3300048903 Bacteria 3116
232 Ga0496101_0023815 3300048904 Bacteria 4233
233 Ga0496101_0047404 3300048904 Bacteria 3085
234 Ga0496102_0043558 3300048905 Bacteria 4070
235 Ga0496102_0133270 3300048905 Bacteria 2327
236 Ga0496102_0139222 3300048905 Bacteria 2275
237 Ga0496102_1053189 3300048905 Bacteria 733
238 Ga0496103_0075297 3300048906 Bacteria 2117
239 Ga0496103_0162037 3300048906 Unclassified 1435
240 Ga0496103_0280822 3300048906 Bacteria 1071
241 Ga0496104_0162079 3300048907 Bacteria 2145
242 Ga0496104_0320288 3300048907 Bacteria 1463
243 Ga0496104_1186246 3300048907 Unclassified 667
244 Ga0496105_0026531 3300048908 Bacteria 4727
245 Ga0496105_0368812 3300048908 Bacteria 1144
246 Ga0496105_0762286 3300048908 Unclassified 738
247 Ga0496106_0001752 3300048909 Bacteria 16216
248 Ga0496107_0004284 3300048910 Bacteria 9657
249 Ga0496107_0190392 3300048910 Bacteria 1524
250 Ga0496108_0034910 3300048911 Bacteria 4178
251 Ga0496108_0139882 3300048911 Bacteria 2085
252 Ga0496109_0050776 3300048912 Bacteria 3776
253 Ga0496109_0175846 3300048912 Bacteria 2009
254 Ga0496109_1049041 3300048912 Bacteria 752
255 Ga0496110_0452886 3300048913 Bacteria 1169
256 Ga0496110_0830631 3300048913 Bacteria 829
257 Ga0496111_0003558 3300048914 Bacteria 9646
258 Ga0496112_0024742 3300048915 Bacteria 5757
259 Ga0496112_0026450 3300048915 Bacteria 5583
260 Ga0496112_0033645 3300048915 Bacteria 4983
261 Ga0496112_0124448 3300048915 Bacteria 2549
262 Ga0496113_0194951 3300048916 Bacteria 1609
263 Ga0496113_0257950 3300048916 Bacteria 1392
264 Ga0496114_0017257 3300048917 Bacteria 5824
265 Ga0496114_0139873 3300048917 Bacteria 2095
266 Ga0496114_0262814 3300048917 Unclassified 1520
267 Ga0496126_0066666 3300048929 Bacteria 3218
268 Ga0501069_0019085 3300049585 Bacteria 3705
269 Ga0501070_0105989 3300049586 Bacteria 2323
270 Ga0501071_0108890 3300049587 Bacteria 2047
271 Ga0501074_0025456 3300049590 Bacteria 4298
272 Ga0501077_0085152 3300049593 Bacteria 2004
273 Ga0501243_021303 3300049675 Bacteria 1070
274 nmdc:mga05p37_17_c1 3300050507 Bacteria 129520
275 nmdc:mga05p37_182046_c1 3300050507 Bacteria 2556
276 nmdc:mga05p37_65844_c1 3300050507 Bacteria 4458
277 nmdc:mga09592_124470_c1 3300050508 Bacteria 2216
278 nmdc:mga09592_191657_c1 3300050508 Bacteria 1769
279 nmdc:mga0qj67_23836_c1 3300050509 Bacteria 4713
280 nmdc:mga0qj67_947025_c1 3300050509 Unclassified 677
281 nmdc:mga06r32_131868_c1 3300050510 Bacteria 2472
282 Ga0495595_0421185 3300053084 Bacteria 677
283 Ga0590075_056417 3300059424 Bacteria 1010
284 Ga0466962_0000067 3300061719 Bacteria 43452
285 2644019026 2643221601 Bacteria 7493239
286 2644180159 2643221631 Bacteria 8168043
287 2786666790 2786546132 Bacteria 10419719
288 2808830306 2808606357 Bacteria 4466944
289 2808851521 2808606360 Bacteria 4404006
290 2808892244 2808606370 Bacteria 4942454
291 2877676945 2877676314 Bacteria 9512378
292 2945918683 2945916053 Bacteria 4555517
293 2945921726 2945920336 Bacteria 4501603
294 2945945370 2945941187 Bacteria 4682474
295 2946038039 2946037020 Bacteria 4900426
296 2954681874 2954673503 Bacteria 9685905
297 2954691050 2954682443 Bacteria 9862841
298 Ga0501279_004193
299 rootH2_10161843
300 Ga0070658_10607190
301 Ga0070683_100052491
302 Ga0068868_100256291
303 Ga0068868_100476909
304 Ga0070660_100879139
305 Ga0070689_100272548
306 Ga0070689_100588727
307 Ga0070691_10059929
308 Ga0070659_100081746
309 Ga0070709_10064848
310 Ga0070709_10101038
311 Ga0070714_100033298
312 Ga0070714_100039027
313 Ga0070714_100102424
314 Ga0070714_100432749
315 Ga0070713_100021690
316 Ga0070713_100051193
317 Ga0070713_100246471
318 Ga0070713_100676296
319 Ga0070710_10039421
320 Ga0070710_10072656
321 Ga0070710_10138822
322 Ga0070711_100073327
323 Ga0070711_100102913
324 Ga0070700_100105716
325 Ga0070694_100135117
326 Ga0070678_100185317
327 Ga0070681_10092873
328 Ga0070681_10316469
329 Ga0068867_100520697
330 Ga0070706_100023077
331 Ga0070706_100531160
332 Ga0070707_100292042
333 Ga0070707_100494307
334 Ga0070679_100129335
335 Ga0070679_100543552
336 Ga0068853_100722842
337 Ga0070695_100855621
338 Ga0070665_100434010
339 Ga0070665_100575122
340 Ga0070664_100306357
341 Ga0068856_100195557
342 Ga0068852_100235353
343 Ga0068859_100117998
344 Ga0068859_100367445
345 Ga0068858_100416962
346 Ga0068858_100588869
347 Ga0081455_10056708
348 Ga0081455_10229742
349 Ga0081538_10050536
350 Ga0070717_10054413
351 Ga0070717_10300302
352 Ga0070717_10851892
353 Ga0075363_100146767
354 Ga0070715_10113442
355 Ga0070716_100217817
356 Ga0070716_100308168
357 Ga0070716_100735151
358 Ga0070712_100015743
359 Ga0070712_100380863
360 Ga0075428_100000704
361 Ga0075428_100020103
362 Ga0075428_100116892
363 Ga0075428_100292455
364 Ga0075430_100048475
365 Ga0075431_100060250
366 Ga0075429_100030723
367 Ga0068865_100109252
368 Ga0075436_100681944
369 Ga0097620_100117989
370 Ga0097620_100367460
371 Ga0105240_10394494
372 Ga0111539_10226484
373 Ga0105245_10341242
374 Ga0114129_10014539
375 Ga0114129_10037805
376 Ga0114129_10240745
377 Ga0105241_10551514
378 Ga0105248_10051966
379 Ga0105248_10363415
380 Ga0105237_10359725
381 Ga0105238_10743271
382 Ga0105249_10045095
383 Ga0105239_11163979
384 Ga0105246_10006342
385 Ga0105246_10163914
386 Ga0157373_10447664
387 Ga0157370_10280346
388 Ga0157370_10429430
389 Ga0157369_10009204
390 Ga0157369_10009652
391 Ga0157369_10122121
392 Ga0157369_11123767
393 Ga0163162_10254469
394 Ga0163162_10400969
395 Ga0163162_10947484
396 Ga0157372_10482955
397 Ga0157372_10921142
398 Ga0157375_10069702
399 Ga0163163_10057962
400 Ga0163163_10225528
401 Ga0163163_10245072
402 Ga0163163_11022422
403 Ga0157377_10119097
404 Ga0157379_10825956
405 Ga0157376_11330106
406 Ga0183367_1004
407 Ga0197907_10172108
408 Ga0206351_10621464
409 Ga0213875_10068238
410 Ga0224712_10262048
411 Ga0207692_10013988
412 Ga0207692_10049754
413 Ga0207710_10290856
414 Ga0207688_10021498
415 Ga0207699_10098717
416 Ga0207705_10492692
417 Ga0207684_10226203
418 Ga0207707_10083232
419 Ga0207707_10201156
420 Ga0207671_10824264
421 Ga0207693_10050687
422 Ga0207693_10142588
423 Ga0207663_10027769
424 Ga0207663_10320171
425 Ga0207660_11537758
426 Ga0207657_10653467
427 Ga0207687_10170392
428 Ga0207687_10425385
429 Ga0207700_10013005
430 Ga0207700_10061140
431 Ga0207700_10204112
432 Ga0207664_10022138
433 Ga0207664_10269531
434 Ga0207664_10310351
435 Ga0207664_10462478
436 Ga0207644_10732454
437 Ga0207690_10101612
438 Ga0207709_10212258
439 Ga0207670_10293756
440 Ga0207665_10306446
441 Ga0207665_10344102
442 Ga0207689_10042349
443 Ga0207661_10109092
444 Ga0207679_10423851
445 Ga0207667_10927444
446 Ga0207640_10417470
447 Ga0207677_10484632
448 Ga0207703_10667282
449 Ga0207678_10338633
450 Ga0207708_10266195
451 Ga0207708_10523475
452 Ga0207702_10326230
453 Ga0207641_10028146
454 Ga0207641_10047634
455 Ga0207676_10361916
456 Ga0207676_10427689
457 Ga0207675_100008264
458 Ga0207675_100658083
459 Ga0207683_10187680
460 Ga0207698_11055930
461 Ga0268266_10147940
462 Ga0268265_10282619
463 Ga0307413_10307018
464 Ga0307406_10244640
465 Ga0307407_10187929
466 Ga0307412_10031401
467 Ga0307412_10639566
468 Ga0307409_100298926
469 Ga0307409_100513386
470 Ga0307409_100660836
471 Ga0307416_100039785
472 Ga0307416_100114751
473 Ga0307414_10899035
474 Ga0307415_100269383
475 Ga0373934_0193668
476 Ga0373949_0141835
477 Ga0373936_0001540
478 Ga0373943_0390021
479 Ga0373955_0044876
480 Ga0373931_0190577
481 Ga0373935_0154909
482 Ga0373933_0015165
483 Ga0373937_0036343
484 Ga0373937_0239786
485 Ga0373925_0899329
486 Ga0395898_0020685
487 Ga0436364_0310151
488 Ga0436364_1472287
489 Ga0436365_1383180
490 Ga0436363_0968779
491 Ga0436362_1288258
492 Ga0439442_000547
493 Ga0439451_018461
494 Ga0439454_009633
495 Ga0439455_0044238
496 Ga0439456_004912
497 Ga0450903_004166
498 Ga0439458_0002032
499 Ga0439464_0018981
500 Ga0439460_0003803
501 Ga0439440_0050246
502 Ga0466969_0008183
503 Ga0466961_0061771
504 Ga0466971_0005828
505 Ga0495592_0291079
506 Ga0495651_0062939
507 Ga0495651_0362398
508 Ga0495653_0010115
509 Ga0495642_0176980
510 Ga0495640_0107328
511 Ga0495640_0165973
512 Ga0495645_0078084
513 Ga0495645_0548280
514 Ga0495667_0024066
515 Ga0495667_0260634
516 Ga0495656_0001729
517 Ga0495668_0337416
518 Ga0495634_0131932
519 Ga0495635_0010873
520 Ga0495635_0230313
521 Ga0495646_0217086
522 Ga0495670_0013743
523 Ga0495636_0032978
524 Ga0495680_0003994
525 Ga0495680_0545787
526 Ga0495684_0170003
527 Ga0495684_0194644
528 Ga0496100_0036070
529 Ga0496101_0023815
530 Ga0496101_0047404
531 Ga0496102_0043558
532 Ga0496102_0133270
533 Ga0496102_0139222
534 Ga0496102_1053189
535 Ga0496103_0075297
536 Ga0496103_0162037
537 Ga0496103_0280822
538 Ga0496104_0162079
539 Ga0496104_0320288
540 Ga0496104_1186246
541 Ga0496105_0026531
542 Ga0496105_0368812
543 Ga0496105_0762286
544 Ga0496106_0001752
545 Ga0496107_0004284
546 Ga0496107_0190392
547 Ga0496108_0034910
548 Ga0496108_0139882
549 Ga0496109_0050776
550 Ga0496109_0175846
551 Ga0496109_1049041
552 Ga0496110_0452886
553 Ga0496110_0830631
554 Ga0496111_0003558
555 Ga0496112_0024742
556 Ga0496112_0026450
557 Ga0496112_0033645
558 Ga0496112_0124448
559 Ga0496113_0194951
560 Ga0496113_0257950
561 Ga0496114_0017257
562 Ga0496114_0139873
563 Ga0496114_0262814
564 Ga0496126_0066666
565 Ga0501069_0019085
566 Ga0501070_0105989
567 Ga0501071_0108890
568 Ga0501074_0025456
569 Ga0501077_0085152
570 Ga0501243_021303
571 nmdc:mga05p37_17_c1
572 nmdc:mga05p37_182046_c1
573 nmdc:mga05p37_65844_c1
574 nmdc:mga09592_124470_c1
575 nmdc:mga09592_191657_c1
576 nmdc:mga0qj67_23836_c1
577 nmdc:mga0qj67_947025_c1
578 nmdc:mga06r32_131868_c1
579 Ga0495595_0421185
580 Ga0590075_056417
581 Ga0466962_0000067
582 2644019026
583 2644180159
584 2786666790
585 2808830306
586 2808851521
587 2808892244
588 2877676945
589 2945918683
590 2945921726
591 2945945370
592 2946038039
593 2954681874
594 2954691050

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

45

91

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6en8-assembly1.cif.gz_B safadr in complex with dsdna 0.7649 10 183
6o6o-assembly1.cif.gz_B structure of the regulator fasr from mycobacterium tuberculosis 0.7367 12 183
6en8-assembly1.cif.gz_C safadr in complex with dsdna 0.7353 6 183
6en8-assembly1.cif.gz_B safadr in complex with dsdna 0.7258 10 183
5k58-assembly1.cif.gz_F structure of the k. pneumonia slma-dna complex bound to the c-terminal of the cell division protein ftsz 0.7202 11 181
ID Description Score Start End Superfamily
2of7A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 1.005 4 52 1.10.10.60
3mvpA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9872 11 51 1.10.10.60
3mvpB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9665 11 51 1.10.10.60
2wv1B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9657 9 53 1.10.10.60
5gpcA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9638 11 53 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A8B2HRK3-F1-model_v4 deleted 0.9982 1 188
AF-A0A8B2HRK3-F1-model_v4 deleted 0.993 1 188
AF-A0A841DZA3-F1-model_v4 AcrR family transcriptional regulator 0.9883 1 184 GO:0000976
GO:0003700
AF-A0A4Q5J298-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9823 3 188 GO:0000976
GO:0003700
AF-A0A7W1GMH7-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9754 2 183 GO:0000976
GO:0003700

Map