F392617

General Info

Members Datasets Scaffolds Average Seq Length
295 167 590 434

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10319287|Ga0114129_103192872
Length 468
Sequence MMGRKSSFVLVLVLLFSLLSIGEVFGRKEKEQVRKGGLPPLSEQRGQAALPDLLHSSNLYFNDGLYLTDDSSLVSTATVEGRLAVFDDAWETIQERYYDPTFHGIDWHAKRATFRPAAARASNTQEFYDVLRQMIASLKDAHTRVYSPDEKFDWWNPRFVTVGLTVREVQGAPTVLHIEQGSAAAKTGIQQGDVISTIDNLPVAAFIAQRMRSAGLADDVNARFRTVATLFDGAAGTAVKVSWTTRNGKQKSAVLQRYWSQRQLGFNTQRKGKIAVLRIDAFTQSVALDFSKVLPDVLNGADGIILDLRFNGGGDAEAMADVASLFLDDGTNLGKFADRSGASFELQTFSKRLWRVPGLLPTKLPLVVLTSENTSSAAEILVAALQTKRRARVIGTETCGCVLAIRNRHALPDGGVLDVSEFDYRTAAGVRLEGAGVKPDKTTQLTRRDIYSRHDPAFELAKSTLASL

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
21 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
22 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
23 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
24 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
25 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
26 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
27 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
28 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
29 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
30 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
31 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
32 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
33 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
34 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
35 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
36 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
37 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
38 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
39 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
40 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
41 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
42 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
43 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
44 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
45 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
46 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
47 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
48 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
49 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
50 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
51 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
52 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
53 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
54 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
55 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
56 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
57 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
58 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
59 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
60 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
61 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
63 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
64 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
65 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
66 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
67 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
68 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
69 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
70 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
71 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
72 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
73 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
74 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
75 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
76 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
77 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
78 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
79 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
80 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
81 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
82 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
83 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
84 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
85 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
86 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
87 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
88 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
89 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
90 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
91 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
131 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
132 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
133 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
134 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
135 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
136 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
137 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
138 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
139 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
140 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
141 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
142 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
143 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
144 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
145 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
146 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
147 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
148 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
149 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
150 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
151 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
152 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
153 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
155 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
156 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
157 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
158 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
159 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
160 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
161 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
162 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
163 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
164 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
165 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
166 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
167 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.71
Rhizosphere 96.61
Stem 0
Stem Tuber 0
Unclassified 18.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10319287 3300009147 Bacteria 2065
2 CNAas_1000141 3300000532 Bacteria 6219
3 JGI24751J29686_10000003 3300002459 Bacteria 157815
4 JGI25406J46586_10004316 3300003203 Bacteria 6631
5 JGI25406J46586_10030119 3300003203 Bacteria 2045
6 rootL2_10012452 3300003322 Unclassified 4639
7 Ga0065714_10064425 3300005288 Bacteria 189652
8 Ga0065704_10011441 3300005289 Bacteria 3432
9 Ga0065704_10084033 3300005289 Bacteria 3386
10 Ga0065704_10126918 3300005289 Bacteria 1683
11 Ga0065712_10067727 3300005290 Bacteria 189643
12 Ga0065715_10088941 3300005293 Bacteria 22679
13 Ga0065707_10115417 3300005295 Bacteria 2267
14 Ga0070690_100015936 3300005330 Unclassified 4492
15 Ga0070670_100000167 3300005331 Bacteria 59452
16 Ga0070670_100083959 3300005331 Bacteria 2736
17 Ga0070670_100109633 3300005331 Bacteria 2378
18 Ga0070677_10021505 3300005333 Bacteria 2368
19 Ga0068869_100036543 3300005334 Unclassified 3488
20 Ga0070666_10030997 3300005335 Unclassified 3528
21 Ga0070680_100000550 3300005336 Bacteria 25670
22 Ga0070680_100023686 3300005336 Bacteria 4900
23 Ga0070682_100002694 3300005337 Bacteria 9827
24 Ga0070682_100005815 3300005337 Bacteria 6887
25 Ga0068868_100004192 3300005338 Bacteria 10079
26 Ga0068868_100055072 3300005338 Unclassified 3137
27 Ga0070660_100015038 3300005339 Bacteria 5583
28 Ga0070689_100001142 3300005340 Bacteria 16765
29 Ga0070689_100074359 3300005340 Bacteria 2659
30 Ga0070687_100002124 3300005343 Bacteria 7329
31 Ga0070661_100015333 3300005344 Bacteria 5408
32 Ga0070692_10021293 3300005345 Bacteria 3153
33 Ga0070692_10026606 3300005345 Unclassified 2861
34 Ga0070692_10043644 3300005345 Unclassified 2307
35 Ga0070669_100002664 3300005353 Bacteria 12857
36 Ga0070669_100019976 3300005353 Bacteria 4784
37 Ga0070669_100135730 3300005353 Bacteria 1892
38 Ga0070671_100004745 3300005355 Bacteria 10801
39 Ga0070673_100013423 3300005364 Bacteria 5666
40 Ga0070659_100000353 3300005366 Bacteria 35063
41 Ga0070667_100125696 3300005367 Bacteria 2235
42 Ga0070701_10005526 3300005438 Bacteria 5231
43 Ga0070701_10044723 3300005438 Bacteria 2269
44 Ga0070705_100033201 3300005440 Bacteria 2875
45 Ga0070700_100000360 3300005441 Bacteria 23385
46 Ga0070700_100025103 3300005441 Bacteria 3507
47 Ga0070700_100072449 3300005441 Unclassified 2202
48 Ga0070694_100007178 3300005444 Bacteria 6783
49 Ga0070694_100008231 3300005444 Bacteria 6377
50 Ga0070694_100027508 3300005444 Bacteria 3693
51 Ga0070694_100069004 3300005444 Bacteria 2430
52 Ga0070694_100116515 3300005444 Bacteria 1911
53 Ga0070708_100000200 3300005445 Bacteria 43782
54 Ga0070708_100025855 3300005445 Bacteria 5020
55 Ga0070681_10000103 3300005458 Bacteria 63054
56 Ga0068867_100060047 3300005459 Unclassified 2819
57 Ga0070706_100000053 3300005467 Bacteria 139565
58 Ga0070706_100006886 3300005467 Bacteria 10727
59 Ga0070707_100210413 3300005468 Unclassified 1895
60 Ga0070698_100012539 3300005471 Bacteria 8975
61 Ga0070698_100080505 3300005471 Unclassified 3252
62 Ga0070699_100001105 3300005518 Bacteria 25093
63 Ga0070699_100002357 3300005518 Bacteria 16955
64 Ga0070679_100000492 3300005530 Bacteria 33622
65 Ga0070697_100122076 3300005536 Bacteria 2180
66 Ga0070686_100011770 3300005544 Bacteria 4970
67 Ga0070696_100054586 3300005546 Bacteria 2784
68 Ga0070693_100005771 3300005547 Bacteria 5982
69 Ga0070693_100029371 3300005547 Bacteria 2999
70 Ga0070693_100040368 3300005547 Unclassified 2619
71 Ga0070693_100066425 3300005547 Bacteria 2111
72 Ga0070693_100144049 3300005547 Unclassified 1503
73 Ga0070704_100019975 3300005549 Bacteria 4311
74 Ga0070704_100065889 3300005549 Bacteria 2610
75 Ga0068855_100217029 3300005563 Bacteria 2147
76 Ga0070664_100000399 3300005564 Bacteria 32416
77 Ga0070664_100134435 3300005564 Bacteria 2173
78 Ga0068857_100000175 3300005577 Bacteria 40688
79 Ga0068857_100022338 3300005577 Viruses 5565
80 Ga0068857_100297061 3300005577 Bacteria 1488
81 Ga0068854_100046872 3300005578 Bacteria 3079
82 Ga0068854_100104953 3300005578 Bacteria 2124
83 Ga0068856_100022242 3300005614 Bacteria 6164
84 Ga0070702_100018327 3300005615 Unclassified 3631
85 Ga0070702_100049797 3300005615 Bacteria 2391
86 Ga0068852_100060079 3300005616 Bacteria 3299
87 Ga0068859_100011012 3300005617 Bacteria 9101
88 Ga0068859_100015160 3300005617 Bacteria 7737
89 Ga0068859_100044007 3300005617 Bacteria 4487
90 Ga0068859_100268035 3300005617 Bacteria 1799
91 Ga0068859_100300521 3300005617 Unclassified 1698
92 Ga0068859_100362992 3300005617 Unclassified 1543
93 Ga0068859_100371081 3300005617 Bacteria 1526
94 Ga0068864_100000573 3300005618 Bacteria 31278
95 Ga0068864_100018737 3300005618 Bacteria 5784
96 Ga0068864_100179385 3300005618 Bacteria 1935
97 Ga0068861_100002166 3300005719 Bacteria 12742
98 Ga0068863_100014876 3300005841 Bacteria 7475
99 Ga0068858_100096309 3300005842 Unclassified 2757
100 Ga0068858_100261036 3300005842 Bacteria 1646
101 Ga0068860_100005807 3300005843 Bacteria 12429
102 Ga0068860_100064112 3300005843 Bacteria 3490
103 Ga0068862_100033824 3300005844 Unclassified 4323
104 Ga0081539_10000633 3300005985 Bacteria 71207
105 Ga0081539_10001384 3300005985 Bacteria 41854
106 Ga0081539_10089278 3300005985 Bacteria 1597
107 Ga0097621_100000969 3300006237 Bacteria 20087
108 Ga0097621_100082698 3300006237 Unclassified 2674
109 Ga0068871_100003112 3300006358 Bacteria 11387
110 Ga0068871_100004050 3300006358 Bacteria 10132
111 Ga0068871_100011622 3300006358 Bacteria 6464
112 Ga0068871_100070242 3300006358 Unclassified 2878
113 Ga0075428_100095074 3300006844 Unclassified 3248
114 Ga0075428_100147988 3300006844 Bacteria 2552
115 Ga0075433_10015476 3300006852 Bacteria 6258
116 Ga0075433_10027275 3300006852 Bacteria 4842
117 Ga0075433_10067636 3300006852 Bacteria 3136
118 Ga0075433_10119151 3300006852 Unclassified 2343
119 Ga0075433_10277327 3300006852 Bacteria 1485
120 Ga0075434_100338719 3300006871 Bacteria 1525
121 Ga0068865_100023251 3300006881 Bacteria 4056
122 Ga0075436_100055265 3300006914 Bacteria 2741
123 Ga0097620_100011012 3300006931 Bacteria 9101
124 Ga0097620_100015160 3300006931 Bacteria 7737
125 Ga0097620_100044008 3300006931 Bacteria 4487
126 Ga0097620_100268038 3300006931 Bacteria 1799
127 Ga0097620_100300505 3300006931 Unclassified 1698
128 Ga0097620_100362997 3300006931 Unclassified 1543
129 Ga0097620_100371102 3300006931 Bacteria 1526
130 Ga0075435_100030160 3300007076 Unclassified 4261
131 Ga0105240_10060293 3300009093 Bacteria 4730
132 Ga0111539_10007143 3300009094 Bacteria 14315
133 Ga0111539_10020882 3300009094 Bacteria 8064
134 Ga0111539_10248340 3300009094 Bacteria 2072
135 Ga0105247_10004257 3300009101 Bacteria 9172
136 Ga0114129_10004606 3300009147 Bacteria 19468
137 Ga0114129_10066564 3300009147 Bacteria 5026
138 Ga0114129_10066881 3300009147 Bacteria 5012
139 Ga0114129_10180983 3300009147 Bacteria 2868
140 Ga0105243_10042369 3300009148 Bacteria 3564
141 Ga0105243_10283375 3300009148 Bacteria 1494
142 Ga0105241_10062970 3300009174 Bacteria 2860
143 Ga0105241_10282712 3300009174 Unclassified 1418
144 Ga0105242_10002742 3300009176 Bacteria 13782
145 Ga0105248_10000894 3300009177 Bacteria 33367
146 Ga0105248_10004787 3300009177 Bacteria 14982
147 Ga0105248_10013444 3300009177 Bacteria 9012
148 Ga0105248_10041265 3300009177 Bacteria 5173
149 Ga0105248_10058510 3300009177 Unclassified 4329
150 Ga0105248_10101230 3300009177 Bacteria 3247
151 Ga0105248_10150732 3300009177 Unclassified 2623
152 Ga0105248_10257261 3300009177 Unclassified 1965
153 Ga0105237_10004297 3300009545 Bacteria 16518
154 Ga0105237_10271642 3300009545 Bacteria 1698
155 Ga0105238_10009797 3300009551 Bacteria 9592
156 Ga0105238_10078576 3300009551 Unclassified 3290
157 Ga0105249_10007667 3300009553 Bacteria 9411
158 Ga0105249_10025804 3300009553 Bacteria 5292
159 Ga0105249_10052647 3300009553 Bacteria 3718
160 Ga0105249_10313373 3300009553 Unclassified 1578
161 Ga0105239_10101371 3300010375 Bacteria 3185
162 Ga0105239_10234788 3300010375 Bacteria 2058
163 Ga0157373_10003667 3300013100 Bacteria 11609
164 Ga0157373_10030735 3300013100 Bacteria 3864
165 Ga0157373_10033511 3300013100 Bacteria 3695
166 Ga0157374_10021607 3300013296 Bacteria 5730
167 Ga0157378_10001338 3300013297 Bacteria 22133
168 Ga0157378_10173592 3300013297 Bacteria 2023
169 Ga0163162_10000589 3300013306 Bacteria 33742
170 Ga0163162_10001518 3300013306 Bacteria 21625
171 Ga0163162_10001664 3300013306 Bacteria 20846
172 Ga0163162_10196600 3300013306 Bacteria 2145
173 Ga0157372_10012367 3300013307 Bacteria 9095
174 Ga0157372_10204533 3300013307 Bacteria 2288
175 Ga0157375_10005267 3300013308 Bacteria 11234
176 Ga0157375_10015546 3300013308 Bacteria 6816
177 Ga0157375_10229616 3300013308 Bacteria 2015
178 Ga0163163_10000298 3300014325 Bacteria 49128
179 Ga0163163_10000801 3300014325 Bacteria 26677
180 Ga0163163_10005061 3300014325 Bacteria 11365
181 Ga0163163_10058891 3300014325 Unclassified 3798
182 Ga0157380_10008413 3300014326 Bacteria 7364
183 Ga0157380_10010562 3300014326 Bacteria 6641
184 Ga0157379_10295741 3300014968 Bacteria 1475
185 Ga0157376_10053835 3300014969 Bacteria 3353
186 Ga0207697_10002961 3300025315 Bacteria 8571
187 Ga0207653_10001964 3300025885 Bacteria 6581
188 Ga0207710_10001565 3300025900 Bacteria 11245
189 Ga0207647_10033803 3300025904 Unclassified 3270
190 Ga0207643_10000812 3300025908 Bacteria 18974
191 Ga0207684_10000053 3300025910 Bacteria 225260
192 Ga0207654_10013339 3300025911 Unclassified 4227
193 Ga0207654_10034309 3300025911 Bacteria 2818
194 Ga0207654_10149198 3300025911 Bacteria 1499
195 Ga0207707_10000033 3300025912 Bacteria 158362
196 Ga0207707_10018326 3300025912 Bacteria 6102
197 Ga0207695_10128506 3300025913 Bacteria 2493
198 Ga0207695_10203000 3300025913 Bacteria 1896
199 Ga0207671_10002611 3300025914 Bacteria 19019
200 Ga0207660_10001124 3300025917 Bacteria 17908
201 Ga0207662_10001223 3300025918 Bacteria 12296
202 Ga0207662_10003268 3300025918 Bacteria 8313
203 Ga0207662_10047878 3300025918 Bacteria 2532
204 Ga0207657_10100061 3300025919 Unclassified 2407
205 Ga0207652_10000032 3300025921 Bacteria 143319
206 Ga0207681_10028932 3300025923 Bacteria 3593
207 Ga0207681_10058142 3300025923 Bacteria 2646
208 Ga0207694_10126442 3300025924 Bacteria 2046
209 Ga0207650_10000007 3300025925 Bacteria 530810
210 Ga0207659_10023902 3300025926 Unclassified 4087
211 Ga0207659_10035189 3300025926 Unclassified 3460
212 Ga0207687_10027758 3300025927 Bacteria 3799
213 Ga0207644_10026407 3300025931 Unclassified 4001
214 Ga0207670_10001922 3300025936 Bacteria 10872
215 Ga0207691_10011665 3300025940 Bacteria 8438
216 Ga0207711_10006137 3300025941 Bacteria 10151
217 Ga0207711_10031098 3300025941 Bacteria 4505
218 Ga0207689_10000395 3300025942 Bacteria 40984
219 Ga0207689_10151993 3300025942 Unclassified 1908
220 Ga0207679_10032284 3300025945 Bacteria 3673
221 Ga0207679_10102320 3300025945 Bacteria 2243
222 Ga0207651_10079810 3300025960 Unclassified 2352
223 Ga0207712_10002729 3300025961 Bacteria 11281
224 Ga0207712_10183233 3300025961 Unclassified 1647
225 Ga0207640_10120562 3300025981 Unclassified 1878
226 Ga0207703_10084391 3300026035 Unclassified 2656
227 Ga0207703_10170252 3300026035 Unclassified 1915
228 Ga0207708_10000825 3300026075 Bacteria 23369
229 Ga0207708_10025012 3300026075 Unclassified 4516
230 Ga0207708_10037124 3300026075 Bacteria 3711
231 Ga0207708_10168468 3300026075 Bacteria 1733
232 Ga0207702_10009903 3300026078 Bacteria 7989
233 Ga0207641_10067150 3300026088 Bacteria 3071
234 Ga0207648_10015555 3300026089 Bacteria 6992
235 Ga0207648_10056256 3300026089 Bacteria 3434
236 Ga0207648_10082809 3300026089 Bacteria 2798
237 Ga0207648_10169741 3300026089 Bacteria 1928
238 Ga0207676_10018641 3300026095 Bacteria 5051
239 Ga0207676_10032444 3300026095 Bacteria 3935
240 Ga0207676_10052870 3300026095 Bacteria 3177
241 Ga0207676_10087384 3300026095 Bacteria 2550
242 Ga0207674_10000058 3300026116 Bacteria 113012
243 Ga0207674_10015116 3300026116 Bacteria 8493
244 Ga0207675_100004840 3300026118 Bacteria 12970
245 Ga0207698_10128815 3300026142 Unclassified 2159
246 Ga0268265_10115642 3300028380 Bacteria 2199
247 Ga0268265_10311818 3300028380 Unclassified 1421
248 Ga0268264_10023120 3300028381 Bacteria 5072
249 Ga0268264_10162475 3300028381 Bacteria 2013
250 Ga0307513_10001988 3300031456 Bacteria 28941
251 Ga0307405_10022549 3300031731 Bacteria 3562
252 Ga0307406_10007209 3300031901 Bacteria 6159
253 Ga0307407_10058499 3300031903 Bacteria 2241
254 Ga0307412_10016744 3300031911 Unclassified 4374
255 Ga0307412_10097091 3300031911 Unclassified 2075
256 Ga0307416_100064333 3300032002 Bacteria 3008
257 Ga0307414_10054468 3300032004 Bacteria 2796
258 Ga0307414_10122870 3300032004 Bacteria 1999
259 Ga0307411_10063211 3300032005 Bacteria 2473
260 Ga0307415_100002098 3300032126 Bacteria 9856
261 Ga0307415_100085973 3300032126 Bacteria 2262
262 Ga0373951_0005234 3300035091 Unclassified 3026
263 Ga0373937_0122736 3300036401 Bacteria 2422
264 Ga0395900_0029754 3300037418 Bacteria 5605
265 Ga0242420_011367 3300038996 Bacteria 1492
266 Ga0439458_0000187 3300042157 Bacteria 14118
267 Ga0451576_0209862 3300045051 Bacteria 2034
268 Ga0495632_0010146 3300046519 Bacteria 5605
269 Ga0496104_0188918 3300048907 Bacteria 1971
270 Ga0496106_0074548 3300048909 Bacteria 2598
271 Ga0496108_0064766 3300048911 Bacteria 3080
272 Ga0496108_0151094 3300048911 Bacteria 2004
273 Ga0496110_0197644 3300048913 Bacteria 1827
274 Ga0496112_0060469 3300048915 Unclassified 3734
275 Ga0496112_0192475 3300048915 Bacteria 2001
276 Ga0496113_0088499 3300048916 Bacteria 2382
277 Ga0501299_009344 3300049522 Bacteria 1614
278 Ga0501038_0001836 3300049574 Bacteria 19637
279 Ga0501217_000327 3300049661 Bacteria 7566
280 Ga0501227_000462 3300049665 Bacteria 8652
281 Ga0501243_011086 3300049675 Bacteria 1411
282 Ga0501225_0015073 3300049705 Bacteria 2156
283 Ga0501234_007227 3300049707 Bacteria 1739
284 Ga0501283_002696 3300049779 Bacteria 2316
285 nmdc:mga05p37_83882_c1 3300050507 Unclassified 3926
286 nmdc:mga0qj67_36279_c1 3300050509 Bacteria 3857
287 nmdc:mga08y16_2496_c1 3300050511 Bacteria 18913
288 nmdc:mga0n895_110714_c1 3300050512 Unclassified 2762
289 nmdc:mga08x19_47764_c1 3300050514 Bacteria 2741
290 nmdc:mga0a205_15883_c1 3300050515 Bacteria 7043
291 nmdc:mga0a205_203179_c1 3300050515 Unclassified 1871
292 nmdc:mga0a205_313731_c1 3300050515 Bacteria 1440
293 nmdc:mga0a205_43937_c1 3300050515 Unclassified 4306
294 Ga0501084_0182297 3300054114 Bacteria 1773
295 Ga0530510_0096181 3300061734 Bacteria 2164
296 Ga0114129_10319287
297 CNAas_1000141
298 JGI24751J29686_10000003
299 JGI25406J46586_10004316
300 JGI25406J46586_10030119
301 rootL2_10012452
302 Ga0065714_10064425
303 Ga0065704_10011441
304 Ga0065704_10084033
305 Ga0065704_10126918
306 Ga0065712_10067727
307 Ga0065715_10088941
308 Ga0065707_10115417
309 Ga0070690_100015936
310 Ga0070670_100000167
311 Ga0070670_100083959
312 Ga0070670_100109633
313 Ga0070677_10021505
314 Ga0068869_100036543
315 Ga0070666_10030997
316 Ga0070680_100000550
317 Ga0070680_100023686
318 Ga0070682_100002694
319 Ga0070682_100005815
320 Ga0068868_100004192
321 Ga0068868_100055072
322 Ga0070660_100015038
323 Ga0070689_100001142
324 Ga0070689_100074359
325 Ga0070687_100002124
326 Ga0070661_100015333
327 Ga0070692_10021293
328 Ga0070692_10026606
329 Ga0070692_10043644
330 Ga0070669_100002664
331 Ga0070669_100019976
332 Ga0070669_100135730
333 Ga0070671_100004745
334 Ga0070673_100013423
335 Ga0070659_100000353
336 Ga0070667_100125696
337 Ga0070701_10005526
338 Ga0070701_10044723
339 Ga0070705_100033201
340 Ga0070700_100000360
341 Ga0070700_100025103
342 Ga0070700_100072449
343 Ga0070694_100007178
344 Ga0070694_100008231
345 Ga0070694_100027508
346 Ga0070694_100069004
347 Ga0070694_100116515
348 Ga0070708_100000200
349 Ga0070708_100025855
350 Ga0070681_10000103
351 Ga0068867_100060047
352 Ga0070706_100000053
353 Ga0070706_100006886
354 Ga0070707_100210413
355 Ga0070698_100012539
356 Ga0070698_100080505
357 Ga0070699_100001105
358 Ga0070699_100002357
359 Ga0070679_100000492
360 Ga0070697_100122076
361 Ga0070686_100011770
362 Ga0070696_100054586
363 Ga0070693_100005771
364 Ga0070693_100029371
365 Ga0070693_100040368
366 Ga0070693_100066425
367 Ga0070693_100144049
368 Ga0070704_100019975
369 Ga0070704_100065889
370 Ga0068855_100217029
371 Ga0070664_100000399
372 Ga0070664_100134435
373 Ga0068857_100000175
374 Ga0068857_100022338
375 Ga0068857_100297061
376 Ga0068854_100046872
377 Ga0068854_100104953
378 Ga0068856_100022242
379 Ga0070702_100018327
380 Ga0070702_100049797
381 Ga0068852_100060079
382 Ga0068859_100011012
383 Ga0068859_100015160
384 Ga0068859_100044007
385 Ga0068859_100268035
386 Ga0068859_100300521
387 Ga0068859_100362992
388 Ga0068859_100371081
389 Ga0068864_100000573
390 Ga0068864_100018737
391 Ga0068864_100179385
392 Ga0068861_100002166
393 Ga0068863_100014876
394 Ga0068858_100096309
395 Ga0068858_100261036
396 Ga0068860_100005807
397 Ga0068860_100064112
398 Ga0068862_100033824
399 Ga0081539_10000633
400 Ga0081539_10001384
401 Ga0081539_10089278
402 Ga0097621_100000969
403 Ga0097621_100082698
404 Ga0068871_100003112
405 Ga0068871_100004050
406 Ga0068871_100011622
407 Ga0068871_100070242
408 Ga0075428_100095074
409 Ga0075428_100147988
410 Ga0075433_10015476
411 Ga0075433_10027275
412 Ga0075433_10067636
413 Ga0075433_10119151
414 Ga0075433_10277327
415 Ga0075434_100338719
416 Ga0068865_100023251
417 Ga0075436_100055265
418 Ga0097620_100011012
419 Ga0097620_100015160
420 Ga0097620_100044008
421 Ga0097620_100268038
422 Ga0097620_100300505
423 Ga0097620_100362997
424 Ga0097620_100371102
425 Ga0075435_100030160
426 Ga0105240_10060293
427 Ga0111539_10007143
428 Ga0111539_10020882
429 Ga0111539_10248340
430 Ga0105247_10004257
431 Ga0114129_10004606
432 Ga0114129_10066564
433 Ga0114129_10066881
434 Ga0114129_10180983
435 Ga0105243_10042369
436 Ga0105243_10283375
437 Ga0105241_10062970
438 Ga0105241_10282712
439 Ga0105242_10002742
440 Ga0105248_10000894
441 Ga0105248_10004787
442 Ga0105248_10013444
443 Ga0105248_10041265
444 Ga0105248_10058510
445 Ga0105248_10101230
446 Ga0105248_10150732
447 Ga0105248_10257261
448 Ga0105237_10004297
449 Ga0105237_10271642
450 Ga0105238_10009797
451 Ga0105238_10078576
452 Ga0105249_10007667
453 Ga0105249_10025804
454 Ga0105249_10052647
455 Ga0105249_10313373
456 Ga0105239_10101371
457 Ga0105239_10234788
458 Ga0157373_10003667
459 Ga0157373_10030735
460 Ga0157373_10033511
461 Ga0157374_10021607
462 Ga0157378_10001338
463 Ga0157378_10173592
464 Ga0163162_10000589
465 Ga0163162_10001518
466 Ga0163162_10001664
467 Ga0163162_10196600
468 Ga0157372_10012367
469 Ga0157372_10204533
470 Ga0157375_10005267
471 Ga0157375_10015546
472 Ga0157375_10229616
473 Ga0163163_10000298
474 Ga0163163_10000801
475 Ga0163163_10005061
476 Ga0163163_10058891
477 Ga0157380_10008413
478 Ga0157380_10010562
479 Ga0157379_10295741
480 Ga0157376_10053835
481 Ga0207697_10002961
482 Ga0207653_10001964
483 Ga0207710_10001565
484 Ga0207647_10033803
485 Ga0207643_10000812
486 Ga0207684_10000053
487 Ga0207654_10013339
488 Ga0207654_10034309
489 Ga0207654_10149198
490 Ga0207707_10000033
491 Ga0207707_10018326
492 Ga0207695_10128506
493 Ga0207695_10203000
494 Ga0207671_10002611
495 Ga0207660_10001124
496 Ga0207662_10001223
497 Ga0207662_10003268
498 Ga0207662_10047878
499 Ga0207657_10100061
500 Ga0207652_10000032
501 Ga0207681_10028932
502 Ga0207681_10058142
503 Ga0207694_10126442
504 Ga0207650_10000007
505 Ga0207659_10023902
506 Ga0207659_10035189
507 Ga0207687_10027758
508 Ga0207644_10026407
509 Ga0207670_10001922
510 Ga0207691_10011665
511 Ga0207711_10006137
512 Ga0207711_10031098
513 Ga0207689_10000395
514 Ga0207689_10151993
515 Ga0207679_10032284
516 Ga0207679_10102320
517 Ga0207651_10079810
518 Ga0207712_10002729
519 Ga0207712_10183233
520 Ga0207640_10120562
521 Ga0207703_10084391
522 Ga0207703_10170252
523 Ga0207708_10000825
524 Ga0207708_10025012
525 Ga0207708_10037124
526 Ga0207708_10168468
527 Ga0207702_10009903
528 Ga0207641_10067150
529 Ga0207648_10015555
530 Ga0207648_10056256
531 Ga0207648_10082809
532 Ga0207648_10169741
533 Ga0207676_10018641
534 Ga0207676_10032444
535 Ga0207676_10052870
536 Ga0207676_10087384
537 Ga0207674_10000058
538 Ga0207674_10015116
539 Ga0207675_100004840
540 Ga0207698_10128815
541 Ga0268265_10115642
542 Ga0268265_10311818
543 Ga0268264_10023120
544 Ga0268264_10162475
545 Ga0307513_10001988
546 Ga0307405_10022549
547 Ga0307406_10007209
548 Ga0307407_10058499
549 Ga0307412_10016744
550 Ga0307412_10097091
551 Ga0307416_100064333
552 Ga0307414_10054468
553 Ga0307414_10122870
554 Ga0307411_10063211
555 Ga0307415_100002098
556 Ga0307415_100085973
557 Ga0373951_0005234
558 Ga0373937_0122736
559 Ga0395900_0029754
560 Ga0242420_011367
561 Ga0439458_0000187
562 Ga0451576_0209862
563 Ga0495632_0010146
564 Ga0496104_0188918
565 Ga0496106_0074548
566 Ga0496108_0064766
567 Ga0496108_0151094
568 Ga0496110_0197644
569 Ga0496112_0060469
570 Ga0496112_0192475
571 Ga0496113_0088499
572 Ga0501299_009344
573 Ga0501038_0001836
574 Ga0501217_000327
575 Ga0501227_000462
576 Ga0501243_011086
577 Ga0501225_0015073
578 Ga0501234_007227
579 Ga0501283_002696
580 nmdc:mga05p37_83882_c1
581 nmdc:mga0qj67_36279_c1
582 nmdc:mga08y16_2496_c1
583 nmdc:mga0n895_110714_c1
584 nmdc:mga08x19_47764_c1
585 nmdc:mga0a205_15883_c1
586 nmdc:mga0a205_203179_c1
587 nmdc:mga0a205_313731_c1
588 nmdc:mga0a205_43937_c1
589 Ga0501084_0182297
590 Ga0530510_0096181

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14684

Tricorn_C1

Tricorn protease C1 domain

80

136

0.96

PF03572

Peptidase_S41

Peptidase family S41

273

443

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
6bxg-assembly1.cif.gz_A 1.45 angstrom resolution crystal structure of pdz domain of carboxy-terminal protease from vibrio cholerae in complex with peptide. 0.8737 131 217
4ql6-assembly1.cif.gz_A structure of c. trachomatis ct441 0.8609 223 400
3wkm-assembly1.cif.gz_A the periplasmic pdz tandem fragment of the rsep homologue from aquifex aeolicus in complex with the fab fragment 0.8553 145 213
4ql6-assembly1.cif.gz_C structure of c. trachomatis ct441 0.838 219 400
4amh-assembly1.cif.gz_B influence of circular permutation on the folding pathway of a pdz domain 0.8351 135 213
ID Description Score Start End Superfamily
af_F4J3G5_117_192_3.30.750.44 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.9174 56 121 3.30.750.44
af_Q5ZA08_147_239_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9088 135 215 2.30.42.10
af_A0A0P0V6A3_155_242_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9018 135 198 2.30.42.10
af_O23614_210_301_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.8923 134 213 2.30.42.10
1n6fF03 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.8842 52 115 3.30.750.44
ID Description Score Start End GO Terms
AF-A0A6G6JZL4-F1-model_v4 PDZ domain-containing protein 0.941 133 215
AF-A0A850C0M0-F1-model_v4 PDZ domain-containing protein 0.9304 132 215 GO:0004175
AF-A0A7S0YHU7-F1-model_v4 PDZ domain-containing protein 0.9177 133 215
AF-A0A7S0TP60-F1-model_v4 PDZ domain-containing protein 0.9131 133 215
AF-A0A0S7XRT8-F1-model_v4 PDZ domain-containing protein 0.9117 131 221 GO:0004175

Map